Ec-28_001470.3 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_001470.3
Unique Name	Ec-28_001470.3
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	473

Homology

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BLAST of Ec-28_001470.3 vs. uniprot
Match: D8LGW2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW2_ECTSI)

HSP 1 Score: 719 bits (1856), Expect = 1.720e-255
Identity = 363/364 (99.73%), Postives = 364/364 (100.00%), Query Frame = 0

Query:   77 MRRAIGEHSADGKLLEEMAYTLNAPMEDGTTAEFARVQITPTRGGRGTLLAFAQEWKTGALNNSHLLLHSKKPDVVNNAGGFGEGFKVAANSLLARFPNSSAEPCNILMVMNGRTWRFCYRNFETDGTVASSEKIDQLVVDEYSTKVYGGMVVFVEIPMSATSIERIWNPEHYVPTMSLATWTPLLPPGASPVMSYVLFLEDSNAPSKFFQLGIYVGSVDNSKGAFFNEGGSVNIGRDRSKTSDVLSNIRTAIAKRVKLLPAGTRDDAVMERLMVNPDALGQEPRWYGSRVLYKSVVSYVRSRDRVPDTTEIFLVGAEIAREVTERLRGAQVNAHVVSAEKELWTYESNEQVSKVLMTKTFAEV 440
            MRRAIGEHSADGKLLEEMAYTLNAPMEDGTTAEFARVQITPTRGGRGTLLAFAQEWKTGALNNSHLLLHSKKPDVVNNAGGFGEGFKVAANSLLARFPNSSAEPCNILMVMNGRTWRFCYRNFETDGTVASSEKIDQLVVDEYSTKVYGGMVVFVEIPMSATSIERIWNPEHYVPTMSLATWTPLLPPGASPVMSYVLFLEDSNAPSKFFQLGIYVGSVDNSKGAFFNEGGSVNIGRDRSKTSDVLSNIRTAIAKRVKLLPAGTRDDAVMERLMVNPDALGQEPRWYGSRVLYKSVVSYVRSRDRVPDTTEIFLVGAEIAREVTERLRGAQVNAHVVSAEKELWTYESNEQVSKVLMTKTFAE+
Sbjct:    1 MRRAIGEHSADGKLLEEMAYTLNAPMEDGTTAEFARVQITPTRGGRGTLLAFAQEWKTGALNNSHLLLHSKKPDVVNNAGGFGEGFKVAANSLLARFPNSSAEPCNILMVMNGRTWRFCYRNFETDGTVASSEKIDQLVVDEYSTKVYGGMVVFVEIPMSATSIERIWNPEHYVPTMSLATWTPLLPPGASPVMSYVLFLEDSNAPSKFFQLGIYVGSVDNSKGAFFNEGGSVNIGRDRSKTSDVLSNIRTAIAKRVKLLPAGTRDDAVMERLMVNPDALGQEPRWYGSRVLYKSVVSYVRSRDRVPDTTEIFLVGAEIAREVTERLRGAQVNAHVVSAEKELWTYESNEQVSKVLMTKTFAEL 364

The following BLAST results are available for this feature:

BLAST of Ec-28_001470.3 vs. uniprot

BLAST of Ec-28_001470.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LGW2_ECTSI	1.720e-255	99.73	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 465..472
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..444
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 445..464
None	No IPR available	TMHMM	TMhelix		coord: 442..464

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:1384605..1386864 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_001470.3	Ec-28_001470.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 1382547..1397798 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_001470.3 ID=Ec-28_001470.3|Name=Ec-28_001470.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=473bp
MGARVGEWKHCPLITQARQIARDVRTVTHTHKTSITSSYNTKHGYAEITF
CTREFFQNLYDHAKQRTGNGLHTSLFMRRAIGEHSADGKLLEEMAYTLNA
PMEDGTTAEFARVQITPTRGGRGTLLAFAQEWKTGALNNSHLLLHSKKPD
VVNNAGGFGEGFKVAANSLLARFPNSSAEPCNILMVMNGRTWRFCYRNFE
TDGTVASSEKIDQLVVDEYSTKVYGGMVVFVEIPMSATSIERIWNPEHYV
PTMSLATWTPLLPPGASPVMSYVLFLEDSNAPSKFFQLGIYVGSVDNSKG
AFFNEGGSVNIGRDRSKTSDVLSNIRTAIAKRVKLLPAGTRDDAVMERLM
VNPDALGQEPRWYGSRVLYKSVVSYVRSRDRVPDTTEIFLVGAEIAREVT
ERLRGAQVNAHVVSAEKELWTYESNEQVSKVLMTKTFAEVCVPRYFSFAF
VTSTFLGVTFARALNRAKCLRR*