Ec-28_001280.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_001280.1
Unique Name	Ec-28_001280.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	537

Homology

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BLAST of Ec-28_001280.1 vs. uniprot
Match: D8LGU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU9_ECTSI)

HSP 1 Score: 667 bits (1721), Expect = 1.190e-235
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0

Query:    1 MASTLSGSPRTGPVGQPGSSRRFPPQASGSNAVSXXXXXXXXXXXXXXXXXXXXSVASPLHLLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMHHLHDQHQQRGRHLAGGALGVGTSGTGNGSGGVPQHHSRGPAPPPTTTQLPSLLPFADAVLRSRGGDSRGNTQVESGGGGGRDAGATGFGAFQARQEQSAQPQRQHYESYEHKRSGSAEMHTSVAAQAEGRAYYSHAAGESGXXXXXXXXXXXGSSGERPPSLLHTAVAPIAVPDRLHHQPHGGGISAGRDRTSSVLXXXXXXXXXXXXXXXXXSGNGGAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMTARGPNAPRWMLSIDERKVERPRSPRGSSVARLTPAEEQARMGGTAAAAGXXXXQAASEELRATSIAPAFNPSPMVGSEQATAAMCATEPPGSGGVGASRAGGDAQPGSVSSSNHLSVRIPTQGGGGGVNGASPEGARR 497
            MASTLSGSPRTGPVGQPGSSRRFPPQASGSNAVSXXXXXXXXXXXXXXXXXXXXSVASPLHLLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMHHLHDQHQQRGRHLAGGALGVGTSGTGNGSGGVPQHHSRGPAPPPTTTQLPSLLPFADAVLRSRGGDSRGNTQVESGGGGGRDAGATGFGAFQARQEQSAQPQRQHYESYEHKRSGSAEMHTSVAAQAEGRAYYSHAAGESGXXXXXXXXXXXGSSGERPPSLLHTAVAPIAVPDRLHHQPHGGGISAGRDRTSSVLXXXXXXXXXXXXXXXXXSGNGGAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMTARGPNAPRWMLSIDERKVERPRSPRGSSVARLTPAEEQARMGGTAAAAGXXXXQAASEELRATSIAPAFNPSPMVGSEQATAAMCATEPPGSGGVGASRAGGDAQPGSVSSSNHLSVRIPTQGGGGGVNGASPEGARR
Sbjct:    1 MASTLSGSPRTGPVGQPGSSRRFPPQASGSNAVSXXXXXXXXXXXXXXXXXXXXSVASPLHLLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMHHLHDQHQQRGRHLAGGALGVGTSGTGNGSGGVPQHHSRGPAPPPTTTQLPSLLPFADAVLRSRGGDSRGNTQVESGGGGGRDAGATGFGAFQARQEQSAQPQRQHYESYEHKRSGSAEMHTSVAAQAEGRAYYSHAAGESGXXXXXXXXXXXGSSGERPPSLLHTAVAPIAVPDRLHHQPHGGGISAGRDRTSSVLXXXXXXXXXXXXXXXXXSGNGGAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMTARGPNAPRWMLSIDERKVERPRSPRGSSVARLTPAEEQARMGGTAAAAGXXXXQAASEELRATSIAPAFNPSPMVGSEQATAAMCATEPPGSGGVGASRAGGDAQPGSVSSSNHLSVRIPTQGGGGGVNGASPEGARR 497

[Close]

BLAST of Ec-28_001280.1 vs. uniprot
Match: A0A6H5K1H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H2_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 6.730e-137
Identity = 421/642 (65.58%), Postives = 435/642 (67.76%), Query Frame = 0

Query:    6 SGSPRTGPVGQPGSSRRFPPQASGSNAVSXXXXXXXXXXXXXXXXXXXXSVASPLHLLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-MHHLHDQHQQRGRHLAGGALGVGTSGTGNGSGGV--------PQHHSRGPAPPPTTTQLPSLLPFADAVLRSRGGDSRGNTQVESGGGGG------RDAGATGFGAFQARQEQSAQPQRQHYESYEHKRSGSAEMHTSVAAQAEGRAYYSHAAGESGXXXXXXXXXXXGSSGERPPSLLHTAVAPIAVPDRLHHQPHGGGISAGRDRTSSVLXXXXXXXXXXXXXXXXXSGNGGAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMTARGPNAPRWMLSIDERKVERPRSPRGSSVARLTPAEEQARMGGTAAAAGXXXXQAASEELR------------------------------------------------------------------------------------------------ATSIAPAFNPSPMVGSEQATAAMCATEPPGSGGVGASRAGGDAQPGSVSSSNHLSVRIPTQGGGGGVNGASPEGARRGEKRPRLSEGEGFDGFVSADPAATAMDTSGADAAVDSGR 536
            SGSPRTGPVGQPGSSRRFP          XXXXXXXXXXXXXXXXXXXXSVASPLHLLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MHHLHDQHQQRGRHLAGGA  +GTSG                PQHHSRGPAPPPTTTQLPSLLPFADAVLRSRGGDSRG+T+VESGG         RDAGATGFGAF ARQEQSAQPQR HYESYEH+RSGSAEMH S+AAQAEGRAYY+HAAGES            GSS      +                                  XXXXXXXXXXXXXXXXXSGNGGAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MTA GPNAPRWMLSIDERKVERPRSPRGSS ARLTPAE+QARMGGTAAAAG    QAASEE R                                                                                                ATSIAPAFN  PMV SEQATAAMCATEPPGSGGV AS+AGGDAQPGSV +SNHLSVRIPTQGGGG VNGASPEGARRGEKRPRLSEGEGF+GF SADPAA+ MDTSGA+AA+DSGR
Sbjct: 3079 SGSPRTGPVGQPGSSRRFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVASPLHLLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANMHHLHDQHQQRGRHLAGGAGSLGTSGXXXXXXXXXXXXXXXXPQHHSRGPAPPPTTTQLPSLLPFADAVLRSRGGDSRGSTKVESGGXXXXXXXXXRDAGATGFGAFHARQEQSAQPQRHHYESYEHQRSGSAEMHPSLAAQAEGRAYYNHAAGES-----------DGSS------IHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNGGAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTALGPNAPRWMLSIDERKVERPRSPRGSSAARLTPAEDQARMGGTAAAAGSGAVQAASEEPRGAGRRDWGGSVGVGSVAESGEGGXXXXXXXXXXXSVAPQSGQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGIAGQEGGGRGSGANSSTTATSIAPAFNRLPMVDSEQATAAMCATEPPGSGGVAASKAGGDAQPGSVYASNHLSVRIPTQGGGGVVNGASPEGARRGEKRPRLSEGEGFEGFASADPAASGMDTSGANAAMDSGR 3703

The following BLAST results are available for this feature:

BLAST of Ec-28_001280.1 vs. uniprot

BLAST of Ec-28_001280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LGU9_ECTSI	1.190e-235	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K1H2_9PHAE	6.730e-137	65.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:1232805..1235675 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_001280.1	Ec-28_001280.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 1232805..1237483 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_001280.1 ID=Ec-28_001280.1|Name=Ec-28_001280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=537bp
MASTLSGSPRTGPVGQPGSSRRFPPQASGSNAVSSAAAGPDAAAAAAAAA
VVTESVASPLHLLGLAAAASSSIQASDGPVSPPSSAAVAAAAAAAAGGGG
ATMHHLHDQHQQRGRHLAGGALGVGTSGTGNGSGGVPQHHSRGPAPPPTT
TQLPSLLPFADAVLRSRGGDSRGNTQVESGGGGGRDAGATGFGAFQARQE
QSAQPQRQHYESYEHKRSGSAEMHTSVAAQAEGRAYYSHAAGESGGSSSH
HHRGGTGSSGERPPSLLHTAVAPIAVPDRLHHQPHGGGISAGRDRTSSVL
AAAAAAAAAAAAAAAAASGNGGAPTAAAGSAPSLGNKGARDAAAAGAPVV
GEAAAQAMTARGPNAPRWMLSIDERKVERPRSPRGSSVARLTPAEEQARM
GGTAAAAGSAAAQAASEELRATSIAPAFNPSPMVGSEQATAAMCATEPPG
SGGVGASRAGGDAQPGSVSSSNHLSVRIPTQGGGGGVNGASPEGARRGEK
RPRLSEGEGFDGFVSADPAATAMDTSGADAAVDSGR*