Ec-28_001150.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_001150.1
Unique NameEc-28_001150.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length282
Homology
[Close]
BLAST of Ec-28_001150.1 vs. uniprot
Match: D8LGT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT7_ECTSI)

HSP 1 Score: 570 bits (1468), Expect = 1.880e-205
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 
Query:    1 MAPRRWALCGLGYTAALALLAFQAPAARAQDSDTCVEVVASNLEDDDFPSADTLYTNSLGDDVRGEYISEDGGYFIWYSPTVPTEWTSETPAAGIEDCNGVWVLSSYPLGDSFTDTVWYEASDSPQCQTNPAELTSTWVRVESDGDVTTETTVEVVCDTPEVVDGDSDGGLSNKTVVVLLIVVGAGFMLLMCLGALACCIHKGPQAPEENILPPGELPEEGSVIGGKAGASTEPGLHAHPEVQGAQHPRPENWAPSYTSNRNGAIPTGSRSGPSVRSIGYA 281
            MAPRRWALCGLGYTAALALLAFQAPAARAQDSDTCVEVVASNLEDDDFPSADTLYTNSLGDDVRGEYISEDGGYFIWYSPTVPTEWTSETPAAGIEDCNGVWVLSSYPLGDSFTDTVWYEASDSPQCQTNPAELTSTWVRVESDGDVTTETTVEVVCDTPEVVDGDSDGGLSNKTVVVLLIVVGAGFMLLMCLGALACCIHKGPQAPEENILPPGELPEEGSVIGGKAGASTEPGLHAHPEVQGAQHPRPENWAPSYTSNRNGAIPTGSRSGPSVRSIGYA
Sbjct:    1 MAPRRWALCGLGYTAALALLAFQAPAARAQDSDTCVEVVASNLEDDDFPSADTLYTNSLGDDVRGEYISEDGGYFIWYSPTVPTEWTSETPAAGIEDCNGVWVLSSYPLGDSFTDTVWYEASDSPQCQTNPAELTSTWVRVESDGDVTTETTVEVVCDTPEVVDGDSDGGLSNKTVVVLLIVVGAGFMLLMCLGALACCIHKGPQAPEENILPPGELPEEGSVIGGKAGASTEPGLHAHPEVQGAQHPRPENWAPSYTSNRNGAIPTGSRSGPSVRSIGYA 281
The following BLAST results are available for this feature:
BLAST of Ec-28_001150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGT7_ECTSI1.880e-205100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 201..281
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..175
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.81
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..29
score: 7.618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1082487..1092632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001150.1Ec-28_001150.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1082177..1093229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_001150.1 ID=Ec-28_001150.1|Name=Ec-28_001150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=282bp
MAPRRWALCGLGYTAALALLAFQAPAARAQDSDTCVEVVASNLEDDDFPS
ADTLYTNSLGDDVRGEYISEDGGYFIWYSPTVPTEWTSETPAAGIEDCNG
VWVLSSYPLGDSFTDTVWYEASDSPQCQTNPAELTSTWVRVESDGDVTTE
TTVEVVCDTPEVVDGDSDGGLSNKTVVVLLIVVGAGFMLLMCLGALACCI
HKGPQAPEENILPPGELPEEGSVIGGKAGASTEPGLHAHPEVQGAQHPRP
ENWAPSYTSNRNGAIPTGSRSGPSVRSIGYA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal