Ec-28_001130.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_001130.2
Unique NameEc-28_001130.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length558
Homology
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BLAST of Ec-28_001130.2 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 2.760e-128
Identity = 340/440 (77.27%), Postives = 348/440 (79.09%), Query Frame = 0 
Query:    1 MGNKMSVSSTFSHASSGGSNSRRGRXXXXXXXXXXXXXXXXXXXXXXXNIDSSSRXXXXXXXXRGVDGGTAYSSSTLTPPRLDDDSGSSGGNTHRFYHPETPRRETAFHCAIWPQLRTPPSAESSETSSLSGGATEGGGSMFVASSTPADSPSRTXXXXXXTASVSTPRGAFGAAAEVGRERYPMFSLSSLRRVGGVAAAFGGFSTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRVSDTGVQGYFTRSRRRFSTQQSGGTREGLALEGWGGSARGAAREQEEVGGAGFSWDSGRAPAARAAPSTTPARRYIPAFSFGSLTSRSRRGSTGVTRSFDERGERRGNAPPRQALHLAPPDWTGTPPRSGPQRCP--------RATTVTEESTPTAT 432
            MGNK+SVSSTFS+ASSGGSNSRRGR      XXXXXXX          NIDSSSR  XXXXX RGVDGGTAY+SST TPPRL+DDSGS GGNTHRFYHPETPRRETAFHCA WPQLRTP SAESSETSSLSGGATEGGGSMF A STPADSPS T      TASVSTPR AFGAAA+VG ERYPMFSLSSLRRVGGVAAAFGGFSTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXX                               LALEG GGSARGAAREQ E+GGA FSWDSGRAPA RAAPST PARRYIPAF+FGSLTSRSRRGSTGVTRSFDERGE R +APPRQ  HLAPPD TGTP RSGPQR P        RATTVTEE TPTAT
Sbjct:    1 MGNKLSVSSTFSYASSGGSNSRRGRGSSYSIXXXXXXXISSI------NIDSSSRSTXXXXXSRGVDGGTAYTSSTRTPPRLNDDSGSGGGNTHRFYHPETPRRETAFHCATWPQLRTPSSAESSETSSLSGGATEGGGSMFAAGSTPADSPSGTAAAAA-TASVSTPRRAFGAAAQVGLERYPMFSLSSLRRVGGVAAAFGGFSTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSICFSXXXXXXXXXXXXX-----------------------------LALEGLGGSARGAAREQREIGGAHFSWDSGRAPATRAAPSTAPARRYIPAFTFGSLTSRSRRGSTGVTRSFDERGESRESAPPRQPPHLAPPDRTGTPHRSGPQRAPCPRALEDSRATTVTEEWTPTAT 404
The following BLAST results are available for this feature:
BLAST of Ec-28_001130.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTI9_9PHAE2.760e-12877.27RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 527..530

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1074615..1077931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001130.2Ec-28_001130.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1074613..1082013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_001130.2 ID=Ec-28_001130.2|Name=Ec-28_001130.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=558bp
MGNKMSVSSTFSHASSGGSNSRRGRGSSSSYSRSSNSSSSSISSISSINI
DSSSRSTNIDNSSRGVDGGTAYSSSTLTPPRLDDDSGSSGGNTHRFYHPE
TPRRETAFHCAIWPQLRTPPSAESSETSSLSGGATEGGGSMFVASSTPAD
SPSRTAAAAAATASVSTPRGAFGAAAEVGRERYPMFSLSSLRRVGGVAAA
FGGFSTDSDSGGGGGNGSSDSDSDSSDSSDSDNGDHDSRGFRSAEGSCSD
SSSISCSTRSIGFSDDDDGDGDGGGGGGGGHPRVSDTGVQGYFTRSRRRF
STQQSGGTREGLALEGWGGSARGAAREQEEVGGAGFSWDSGRAPAARAAP
STTPARRYIPAFSFGSLTSRSRRGSTGVTRSFDERGERRGNAPPRQALHL
APPDWTGTPPRSGPQRCPRATTVTEESTPTATPAAASAASPASSSAASAS
ASPVGGGGGAGGGGSGGFSAAAAATAASSSPSSSATVLAPTSSSSHSLRT
TAAAATRGTPSTVSMPSSSVSTSSPEEERLXXXXXXXXXXXXXXXXXXXX
XXXXXXXX
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