Ec-28_000550.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000550.1
Unique Name	Ec-28_000550.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	79

Homology

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BLAST of Ec-28_000550.1 vs. uniprot
Match: D7G9D9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D9_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.840e-45
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query:    1 MGWESFCAYAVTGAGKRRRAKTRRRKRAEGIQVERKERNMSESLDASLSGFVNVLGVLVFVSITVYHVVTANRKDIAS 78
            MGWESFCAYAVTGAGKRRRAKTRRRKRAEGIQVERKERNMSESLDASLSGFVNVLGVLVFVSITVYHVVTANRKDIAS
Sbjct:    1 MGWESFCAYAVTGAGKRRRAKTRRRKRAEGIQVERKERNMSESLDASLSGFVNVLGVLVFVSITVYHVVTANRKDIAS 78

The following BLAST results are available for this feature:

BLAST of Ec-28_000550.1 vs. uniprot

BLAST of Ec-28_000550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G9D9_ECTSI	2.840e-45	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018943	Oligosaccaryltransferase	PFAM	PF10215	Ost4	coord: 45..75 e-value: 1.9E-6 score: 27.6
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 70..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..69
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..47
None	No IPR available	TMHMM	TMhelix		coord: 48..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:560852..562515 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000550.1	Ec-28_000550.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 560852..562515 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000550.1 ID=Ec-28_000550.1|Name=Ec-28_000550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=79bp
MGWESFCAYAVTGAGKRRRAKTRRRKRAEGIQVERKERNMSESLDASLSG
FVNVLGVLVFVSITVYHVVTANRKDIAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018943	Oligosaccaryltransferase