Ec-28_000500.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000500.1
Unique NameEc-28_000500.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length512
Homology
BLAST of Ec-28_000500.1 vs. uniprot
Match: D7G9D4_ECTSI (Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 1016 bits (2627), Expect = 0.000e+0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query:    1 MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 511
            MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR
Sbjct:    1 MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 511          
BLAST of Ec-28_000500.1 vs. uniprot
Match: D8LFB3_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 6.790e-20
Identity = 77/279 (27.60%), Postives = 128/279 (45.88%), Query Frame = 0
Query:  125 VVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPET-SDISTPPQNMLLLHSAT-----ELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEG-----NPWDNPPTFWTAFIEASRNIPTVE--SCGDGGLKIIAP--LLGN--DDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAA-VRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPL-NEICGGFFFGAFN-ILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSD 383
            V FN G   D  YF+FS    V+ YEN+++ ++ +G+P T S +  P Q+ L +H+ +        E   L++  V +A C GWG +Y+T D  D G     NPW+    +W   +EA +  PT+   SC    + ++ P  L G   +DA  + +            + V ++      G+ T+  A  +RDAGA+VLCY + + Y +    + E+           E+CGG +   ++   L+ E    +  LY+  Q    +  +V      DY D
Sbjct:  179 VTFNPGGGVDPAYFAFSGNPTVMSYENFYRVMKNVGMPRTPSSVLDPSQHALAVHTTSPDLDGNTEETRALVEAIVQEAACSGWGKIYLTSDSQDPGSDDGGNPWNVLTNYWDTLVEAVKAYPTLPPPSCSGPEMALMVPVWLAGEALEDAVDDVLGVVTKSNFLEGGVTVVLDAR---DGDGTNPTATQLRDAGARVLCYFDFNSYTDVYDLIGELTSADPPAAFATEVCGGLYVDNYSEFTLSAEQ--NIYDLYITVQNVIPRGMLVI-----DYED 447          
BLAST of Ec-28_000500.1 vs. uniprot
Match: A0A517XLQ9_9BACT (Spherulation-specific family 4 n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517XLQ9_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 3.380e-11
Identity = 63/221 (28.51%), Postives = 92/221 (41.63%), Query Frame = 0
Query:   48 DPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSV-------------------------EEEITAY----------QSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKG--WGTVYVTDDLFDEGNPWDNPPTFWTAFIEA 231
            D +W  LA+ A  G  +  I+NPASGPG+VTD +Y  VID V+ AG   + YV+T+Y  +    V                           E+ AY            +  ++ N G   D  YF    P  V  +EN   + R+   P  +    P +   L+H+       P+   P  + A  +G  +G V+VTD      NPWD  PT+W   + A
Sbjct:   41 DARWQQLADAAKNGVPLTVIVNPASGPGKVTDPNYTAVIDGVQKAGVTTVGYVSTSYARRPAADVLADVKTWLKLYPTTQGIFLDEQPSGAAEVAAYLELCESIRRLNPKLTILSNPGTVCDAGYFGTGGPDVVCVHENE-GSFRKYARPAKA--YPPGRTAGLVHTT------PQGANPAAEVALARGHGFGMVFVTDARMP--NPWDRLPTYWDDLLTA 250          
BLAST of Ec-28_000500.1 vs. uniprot
Match: A0A1I2K2G6_9ACTN (Spherulation-specific family 4 n=9 Tax=Streptomyces TaxID=1883 RepID=A0A1I2K2G6_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 8.290e-6
Identity = 53/184 (28.80%), Postives = 81/184 (44.02%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFS--FSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVT 208
            M  +IPLY+ P  D G        W  L   AA   T   ++NPA+GPG   D ++      ++ AGA++L YV T YG ++T  V E++  ++            AD  +     S PAE+       ++VR+LG   T+ +  P      +H A   A   +L   F      +G  T YV+
Sbjct:    1 MSLLIPLYVHPAEDPG-------AWHQLVTAAAR--TYAVVINPANGPGPSPDPAFTAAAGALRAAGARLLGYVDTDYGARSTAEVAEDVVRHRE--------WYGADGCFLDRVTSDPAELRACRRLVRSVRRLGA--TTVVLNPG-----VHPAPGYARVADLTVTF------EGHWTTYVS 154          
BLAST of Ec-28_000500.1 vs. uniprot
Match: UPI001F46EA5D (spherulation-specific family 4 protein n=1 Tax=Streptomyces glomeratus TaxID=284452 RepID=UPI001F46EA5D)

HSP 1 Score: 55.5 bits (132), Expect = 4.530e-5
Identity = 42/136 (30.88%), Postives = 63/136 (46.32%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFS--FSPPAEVLGYENYFKAVRQLG 160
            M  ++PLY+ P  D G        W  L   A    T   +LNPASGPG   D ++  V   ++ AGA++L YV T YGN+    + E++  +Q           AAD  +     + PA +       ++VR+LG
Sbjct:    1 MTLLVPLYVHPAEDPG-------AWHRLIRAATR--TYAIVLNPASGPGTGPDRAFTAVAGALRAAGARLLGYVDTDYGNRDRAEIAEDLRRHQ--------RWYAADGCFLDRVTAAPAGLPACRRLVRSVRRLG 119          
The following BLAST results are available for this feature:
BLAST of Ec-28_000500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G9D4_ECTSI0.000e+0100.00Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D8LFB3_ECTSI6.790e-2027.60Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A517XLQ9_9BACT3.380e-1128.51Spherulation-specific family 4 n=1 Tax=Urbifossiel... [more]
A0A1I2K2G6_9ACTN8.290e-628.80Spherulation-specific family 4 n=9 Tax=Streptomyce... [more]
UPI001F46EA5D4.530e-530.88spherulation-specific family 4 protein n=1 Tax=Str... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021986Spherulation-specific family 4PFAMPF12138Spherulin4coord: 30..121
e-value: 1.1E-12
score: 48.2
IPR021986Spherulation-specific family 4PANTHERPTHR35040FAMILY NOT NAMEDcoord: 119..234
coord: 28..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..511
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.683

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:503666..514598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000500.1Ec-28_000500.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 503666..516092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000500.1 ID=Ec-28_000500.1|Name=Ec-28_000500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=512bp
MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQ
WTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYV
ATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYE
NYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCK
GWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIA
PLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDA
GAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAI
EDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDE
DDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVV
AEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSER
WLPEFKPHDTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021986Spherulin4