Ec-28_000420.4 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000420.4
Unique NameEc-28_000420.4
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length603
Homology
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BLAST of Ec-28_000420.4 vs. uniprot
Match: D7FII6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII6_ECTSI)

HSP 1 Score: 918 bits (2373), Expect = 0.000e+0
Identity = 496/504 (98.41%), Postives = 499/504 (99.01%), Query Frame = 0 
Query:   10 STFLLTKAEDPLDAPMRDPEVPPTTVKNIVPASAPTAPVSPNWTQLSDGLRALISTTDSLPINVVPLRYSSMHHKPLQLHGQKLKRSIENGSIRGLRYNASNQTVELEETPIASVREAKAPVQTTGKTTPTTKKAAAAKTAPSNPGSPDWTHLSRSLQALAIAKGPLSLSEVGQAYKSKYNNTLDLRGHDLRASLVSGDLQGVRYNASTGKLEIDATRGGATRTTKSPAALQPAKQRTRKETAAAKSHAAVEGQTRPDSDFSERQRSAPVTEETSAPTQPPYLLIDSSSSYNTALATLSLDGALGRTLQQVCMGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQRTTEFAMSS 513
            STFLLTKAEDPLDAPMRDPEVPPTTVKNIVPASAPTAPVSPNWTQLSDGLRALISTTDSLPINVVPLRYSSMHHKPLQLHGQKLKRSIENGSIRGLRYNASNQTVELEETPIASVREAKAPVQTTGKTTPTTKKAAAAKTAPSNPGSPDWTHLSRSLQALAIAKGPLSLSEVGQAYKSKYNNTLDLRGHDLRASLVSGDLQGVRYNASTGKLEIDATRGGATRTTKSPAALQPAKQRTRKETAAAKSHAAVEGQTRPDSDFSERQRSAPVTEETSAPTQPPYLLIDSSSSYNTALATLSLDGALGRTLQQVCMGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQ   +  +S+
Sbjct:   39 STFLLTKAEDPLDAPMRDPEVPPTTVKNIVPASAPTAPVSPNWTQLSDGLRALISTTDSLPINVVPLRYSSMHHKPLQLHGQKLKRSIENGSIRGLRYNASNQTVELEETPIASVREAKAPVQTTGKTTPTTKKAAAAKTAPSNPGSPDWTHLSRSLQALAIAKGPLSLSEVGQAYKSKYNNTLDLRGHDLRASLVSGDLQGVRYNASTGKLEIDATRGGATRTTKSPAALQPAKQRTRKETAAAKSHAAVEGQTRPDSDFSERQRSAPVTEETSAPTQPPYLLIDSSSSYNTALATLSLDGALGRTLQQVCMGSMVVVHLSGRQLGSEHGSISLIKVVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQAREKVGLSA 542
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BLAST of Ec-28_000420.4 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE)

HSP 1 Score: 726 bits (1873), Expect = 2.430e-252
Identity = 397/466 (85.19%), Postives = 419/466 (89.91%), Query Frame = 0 
Query:   81 MHHKPLQLHGQKLKRSIENGSIRGLRYNASNQTVELEETPIASVREAKAPVQTTGKTTPTTKKAAAAKTAPSNPGSPDWTHLSRSLQALAIAKGPLSLSEVGQAYKSKYNNTLDLRGHDLRASLVSGDLQGVRYNASTGKLEIDATRGGATRTTKSPAALQPAKQRTRKETAAAKSHAAVEGQTRPDSDFSERQRSAPVTEETSAPTQPPYLLIDSSSSYNTALATLSLDGALGRTLQQVCMGSMVVVHLSGRQLGSEHGSISLIK--VVGKISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFRALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVLEASQRTTEFAMSSWSQDTRRMAFRNHGSCWGGGVGRILTSFELK 544
            MH  PLQLHG KLK SIENGSIRGLRYNASNQTVELEETP ASVREA+APV+TTGKTTPTTK AA AK  PSNPGSPDWT LSR L+AL IA+GPLSLSEV +AY SKYN  L+LRGH +RASLV+GDL GVRYNASTGKLE+DATRGGATR TK+PAALQPAKQRTRKETA AK HAAVEGQTRPDSD  ERQRSAPVTEETSAPTQPPYLLIDS SSY  ALATLSLDGALGRTLQQVCMGS VVVHLSGRQLG+ +GSISLIK  VVG +S PPVLFDVVELSKT+  QN+L  KLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLA EALHG FGAD+VTVL AFGQ  SY+DAAFRALSCEEASTMRRPID TTLGLAAQPV+SLAKVTESA+LSLSK+ QKDIVLEASQR TEFAMSS  QDTRR+AFRNHGSC GGGVGRILTSF+LK
Sbjct:    1 MHQNPLQLHGHKLKSSIENGSIRGLRYNASNQTVELEETPNASVREARAPVKTTGKTTPTTK-AATAKAEPSNPGSPDWTRLSRDLRALTIAQGPLSLSEVARAYMSKYNKDLNLRGHGVRASLVNGDLHGVRYNASTGKLEVDATRGGATRATKAPAALQPAKQRTRKETAVAKRHAAVEGQTRPDSDVGERQRSAPVTEETSAPTQPPYLLIDSPSSYIAALATLSLDGALGRTLQQVCMGSTVVVHLSGRQLGAANGSISLIKLQVVGTMSHPPVLFDVVELSKTEDHQNMLRKKLSPLFADQRSTKVVYDFSNSAIALRRQFGAGFTIGRILDLQLASEALHGHFGADIVTVLTAFGQPASYNDAAFRALSCEEASTMRRPIDATTLGLAAQPVISLAKVTESAILSLSKEGQKDIVLEASQRMTEFAMSSGRQDTRRVAFRNHGSCCGGGVGRILTSFDLK 465
The following BLAST results are available for this feature:
BLAST of Ec-28_000420.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FII6_ECTSI0.000e+098.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2P2_9PHAE2.430e-25285.19AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.500coord: 232..519
e-value: 6.2E-7
score: 30.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 323..491

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:438672..447223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000420.4Ec-28_000420.4Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 436391..453364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000420.4 ID=Ec-28_000420.4|Name=Ec-28_000420.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=603bp
MGSALAPCESTFLLTKAEDPLDAPMRDPEVPPTTVKNIVPASAPTAPVSP
NWTQLSDGLRALISTTDSLPINVVPLRYSSMHHKPLQLHGQKLKRSIENG
SIRGLRYNASNQTVELEETPIASVREAKAPVQTTGKTTPTTKKAAAAKTA
PSNPGSPDWTHLSRSLQALAIAKGPLSLSEVGQAYKSKYNNTLDLRGHDL
RASLVSGDLQGVRYNASTGKLEIDATRGGATRTTKSPAALQPAKQRTRKE
TAAAKSHAAVEGQTRPDSDFSERQRSAPVTEETSAPTQPPYLLIDSSSSY
NTALATLSLDGALGRTLQQVCMGSMVVVHLSGRQLGSEHGSISLIKVVGK
ISRPPVLFDVVELSKTKTRQNLLLNKLSPLFADQRSTKVVYDFSNSAIAL
RRQFGAGFTIGRILDLQLAFEALHGRFGADVVTVLRAFGQQVSYSDAAFR
ALSCEEASTMRRPIDTTTLGLAAQPVLSLAKVTESAVLSLSKKRQKDIVL
EASQRTTEFAMSSWSQDTRRMAFRNHGSCWGGGVGRILTSFELKHVSAFP
ENIVYGFFRLKVYICPMRPTLYNGSKATFSTGALGRKYSNASTLNVPRPF
VV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf