Ec-28_000350.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000350.1
Unique NameEc-28_000350.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length438
Homology
[Close]
BLAST of Ec-28_000350.1 vs. uniprot
Match: D7FII0_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0_ECTSI)

HSP 1 Score: 707 bits (1825), Expect = 1.280e-254
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0 
Query:    1 MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL 437
            MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL
Sbjct:    1 MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL 437
The following BLAST results are available for this feature:
BLAST of Ec-28_000350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FII0_ECTSI1.280e-254100.00Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 164..179
score: 39.92
coord: 212..226
score: 37.98
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 196..225
e-value: 2.1
score: 17.3
coord: 271..300
e-value: 0.039
score: 23.1
coord: 237..266
e-value: 0.0055
score: 25.9
coord: 163..192
e-value: 3.2E-4
score: 30.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 163..195
score: 13.998
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 237..269
score: 11.514
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 196..228
score: 11.461
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 271..303
score: 12.209
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 140..237
e-value: 1.8E-26
score: 94.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 238..331
e-value: 6.2E-21
score: 76.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 142..311
NoneNo IPR availablePFAMPF13637Ank_4coord: 145..184
e-value: 5.5E-7
score: 30.0
NoneNo IPR availablePANTHERPTHR24133FAMILY NOT NAMEDcoord: 234..340
coord: 143..325
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 201..301
e-value: 5.6E-16
score: 58.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 145..309
score: 47.27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:391730..394304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000350.1Ec-28_000350.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 391730..395553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000350.1 ID=Ec-28_000350.1|Name=Ec-28_000350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=438bp
MVPPRNKQQSTTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPI
DFVDATTAAAASCRGRPCGGNTTCYAHGSSRDVRPPVLLRQQSAPASSTA
RPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARAL
LESNTDLRTRNDRGMTPLHLACSTGEVDAAKVLLLAGADSHARDHRSRCP
LHMAALSGKSELVSSLLTCGADPNKASDLGTTALHNAGFTPLHVAARCGR
LTALRALLDAGEAVDSPSTPAGTTPLHLAAGFSRLSCVEELLLRGADPSR
RNKRGATPLDMGGPETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQR
KRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRR
SLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom