Ec-28_000330.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000330.1
Unique NameEc-28_000330.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length292
Homology
BLAST of Ec-28_000330.1 vs. uniprot
Match: D7FIH8_ECTSI (Coated vesicle membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH8_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.380e-187
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
Query:    1 MMGRRGGPGAARVARWHGPLRVTSVCLVALLVTSVNSMTMDVDDGSIACAIVVAKQGNTINANFEVLGYPVKNTMVILQKRGDNKLLYRKEDLGEDYFRVDATNDGDYELCFINGGEERIKSLRNKLVPEVNSFVGLNALRQEKXXXXXXXXXXXXXXXXXXXXXXXELLDGLSDDMPSWYAKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            MMGRRGGPGAARVARWHGPLRVTSVCLVALLVTSVNSMTMDVDDGSIACAIVVAKQGNTINANFEVLGYPVKNTMVILQKRGDNKLLYRKEDLGEDYFRVDATNDGDYELCFINGGEERIKSLRNKLVPEVNSFVGLNALRQEKXXXXXXXXXXXXXXXXXXXXXXXELLDGLSDDMPSWYAKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL
Sbjct:    1 MMGRRGGPGAARVARWHGPLRVTSVCLVALLVTSVNSMTMDVDDGSIACAIVVAKQGNTINANFEVLGYPVKNTMVILQKRGDNKLLYRKEDLGEDYFRVDATNDGDYELCFINGGEERIKSLRNKLVPEVNSFVGLNALRQEKXXXXXXXXXXXXXXXXXXXXXXXELLDGLSDDMPSWYAKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A836CQY8_9STRA (Transmembrane emp24 domain-containing protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQY8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.520e-9
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 0
Query:  220 LAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            + + ++ LV  L    DH++YMR RE+ HRE +  T+ RL+  T  EA +LV ++  Q+SYIR+FFE KR++
Sbjct:    1 MIDASEELVNDLYTMVDHQTYMRQREQSHRETIDSTNRRLLLWTIAEALLLVSMAMWQVSYIRQFFEVKRMM 72          
BLAST of Ec-28_000330.1 vs. uniprot
Match: B8C202_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C202_THAPS)

HSP 1 Score: 66.2 bits (160), Expect = 1.580e-8
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 0
Query:  182 AKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            AK+   +  GF +R+      L   A     D  + S L E +D L+E L    DH+ YMRGRE  H      T +R++  T +EA VL+ +S+ Q+ Y+++FFETKR L
Sbjct:  116 AKDGIDREVGFAIRVLPPQRGLDGEAG---PDDRLTSHLIEMSDKLMEGLHTMADHQEYMRGRENRHSVLADTTFNRIVQWTVLEAVVLILISFGQVLYLKKFFETKRHL 222          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A7S1CB01_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB01_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.910e-8
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0
Query:  182 AKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETK 288
            AK    KT  F L  G        +A+V        + L  E   L + ++   D + YMR RE  HR+  + T+SR++W TF+EAAVLV +S  Q+  I   FETK
Sbjct:   14 AKTKTQKTIAFNLHAGASAAGAADLANVG-----HITPLQREVTQLRDAVTAVQDEQQYMRSREAVHRDTTESTNSRVLWFTFLEAAVLVIMSAWQVWTILGQFETK 115          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A7S1CB40_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB40_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.950e-7
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0
Query:  182 AKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETK 288
            AK    KT  F L  G        +A+V        + L  E   L + ++   D + YMR RE  HR+  + T+SR++W TF+EAAVLV +S  Q+  I   FETK
Sbjct:   99 AKTKTQKTIAFNLHAGASAAGAADLANVG-----HITPLQREVTQLRDAVTAVQDEQQYMRSREAVHRDTTESTNSRVLWFTFLEAAVLVIMSAWQVWTILGQFETK 200          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A7S1TXQ7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXQ7_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.980e-7
Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 0
Query:  183 KESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            K++G    GF  R   +++    +A   +E              +++ L   +DH+SYMR REE HR+  + T+ R++  T VEA VL  ++  Q+ YIR+FFE KR++
Sbjct:  110 KKAGSVEVGFAYRKSAEIKSTTDLAATVME--------------ILQGLQDLSDHQSYMREREELHRDISESTNYRVLVWTLVEAIVLGIMTIWQIMYIRKFFEVKRVV 204          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A7S1YMF7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YMF7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.610e-7
Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0
Query:  191 GFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            GF +R+      ++  A     D  + S L E ++ L+E L    DH+ YMR RE  H      T +R+   TF+EA VLV +S+ Q+ Y+++FFE +R L
Sbjct:  124 GFAIRVVPPQRGIEGEAG---PDDRLTSHLIELSEKLMEGLDTMTDHQEYMRERENRHAVLADSTFNRVKEWTFLEAIVLVLISFGQVLYLKKFFEQRRYL 221          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A4P9VYA0_9FUNG (Supernatant protein factor, C-terminal domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYA0_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 2.390e-6
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0
Query:  220 LAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            L EE   + + +    D ++Y+  RE  HR+  + T+SR+ W +  E AVL+ V   Q+SY++RFFE KR++
Sbjct:  134 LQEEVRQMADGIRAIRDEQAYLMQREAMHRKTAESTNSRVAWWSLFETAVLIAVCIFQVSYLKRFFEVKRLV 205          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A4P9Y5D7_9FUNG (Putative COPII-coated vesicle protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y5D7_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 9.200e-6
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  220 LAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            LA E   L   L    D +SY+  RE  HR+  + T+SR+ W +F +  +L  V + Q+SY++RFFE KR++
Sbjct:  120 LANEIRQLTRHLQEVRDAQSYIVIRERMHRDTAESTNSRVKWWSFFQVILLATVCFFQISYLKRFFEVKRLV 191          
BLAST of Ec-28_000330.1 vs. uniprot
Match: A0A177WE87_BATDL (GOLD domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WE87_BATDL)

HSP 1 Score: 54.3 bits (129), Expect = 4.360e-5
Identity = 26/94 (27.66%), Postives = 53/94 (56.38%), Query Frame = 0
Query:  198 KDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291
            K + D++      ++++ M  F      IL++ +    D +S++  R+  HRE ++ T  R++W +F +  +++     Q+ Y+RRFFETKR++
Sbjct:  127 KIIRDMKKDNTKEIDEEQMDLFRT--LQILMDNIRFMRDEQSFLLKRQNRHRETIQSTHGRVLWWSFGQIVMVLIACGFQVLYLRRFFETKRVV 218          
The following BLAST results are available for this feature:
BLAST of Ec-28_000330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FIH8_ECTSI1.380e-187100.00Coated vesicle membrane protein n=1 Tax=Ectocarpus... [more]
A0A836CQY8_9STRA2.520e-943.06Transmembrane emp24 domain-containing protein 2 n=... [more]
B8C202_THAPS1.580e-837.27Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1CB01_9STRA3.910e-836.45Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1CB40_9STRA1.950e-736.45Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1TXQ7_9STRA1.980e-733.03Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1YMF7_9STRA4.610e-735.64Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A4P9VYA0_9FUNG2.390e-637.50Supernatant protein factor, C-terminal domain-cont... [more]
A0A4P9Y5D7_9FUNG9.200e-638.89Putative COPII-coated vesicle protein n=1 Tax=Pipt... [more]
A0A177WE87_BATDL4.360e-527.66GOLD domain-containing protein n=2 Tax=Batrachochy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 37..286
e-value: 6.7E-19
score: 78.8
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 38..286
e-value: 1.5E-19
score: 70.6
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 25..286
NoneNo IPR availablePANTHERPTHR22811:SF31TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2coord: 25..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 282..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..37
score: 0.671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:377566..383972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000330.1Ec-28_000330.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 377441..384013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000330.1 ID=Ec-28_000330.1|Name=Ec-28_000330.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=292bp
MMGRRGGPGAARVARWHGPLRVTSVCLVALLVTSVNSMTMDVDDGSIACA
IVVAKQGNTINANFEVLGYPVKNTMVILQKRGDNKLLYRKEDLGEDYFRV
DATNDGDYELCFINGGEERIKSLRNKLVPEVNSFVGLNALRQEKKKKALA
QQREDEDDDSFFYRDDEELLDGLSDDMPSWYAKESGYKTFGFGLRLGKDV
EDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRE
NVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720TMP21-related