Ec-27_001840.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_001840.2
Unique NameEc-27_001840.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length247
Homology
BLAST of Ec-27_001840.2 vs. uniprot
Match: D8LLA0_ECTSI (Small ubiquitin-like modifier n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA0_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.640e-46
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
Query:   72 MATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPGPQYWPFPRTATTADAWE 145
            MATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPGPQYWPFPRTATTADA E
Sbjct:    1 MATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPGPQYWPFPRTATTADACE 74          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A6H5LH57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH57_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.040e-28
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
Query:   64 EETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHD 118
            EETYFKLRMATPMKRVFDTYADRKGVC+TTLRFLLNGERVGCDDTPASLQLG  D
Sbjct:    3 EETYFKLRMATPMKRVFDTYADRKGVCITTLRFLLNGERVGCDDTPASLQLGPQD 57          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A6U5EFS5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EFS5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.300e-20
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   54 VVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            + IRV D  GEET+FK++  T M +VF+TYA RKGV V +LRFLL+G+R+  +DTPA L+L   D+IDC+ EQ G
Sbjct:   17 ITIRVRDQTGEETFFKIKKTTKMSKVFNTYAQRKGVQVNSLRFLLDGDRIQNEDTPAKLELDDQDQIDCMLEQMG 91          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A7S2LHD9_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHD9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 9.830e-20
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query:   54 VVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            + IRV D  GEET+FK++ +T M +V  TYA RKGV  TTLRFL++GERV  DDTP SL L   D+IDC+ EQ G
Sbjct:   59 ITIRVRDQTGEETFFKIKKSTKMSKVIQTYASRKGVDSTTLRFLVDGERVQPDDTPGSLDLDDQDQIDCMLEQSG 133          
BLAST of Ec-27_001840.2 vs. uniprot
Match: D7FVD5_ECTSI (Small ubiquitin-like modifier n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD5_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.670e-19
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   63 GEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            GEETYFK++  T M++VF TYA RKGV V+ LRFLL+G RVG +DTP SL+L   D+IDC+ EQ G
Sbjct:   15 GEETYFKVKKTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQG 80          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A024TXQ1_9STRA (Ubiquitin-like domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXQ1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.600e-19
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   46 GQGSAEATVVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            G+   + T+ IRV D  GEET+FK++  T M+++F  YA RKGV VT LRFLL+G R+G D TP  L+L   D+IDC  EQ G
Sbjct:   10 GEDEKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVTALRFLLDGTRIGGDQTPKMLELEDQDQIDCALEQVG 92          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A7S1D4N0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4N0_CYCTE)

HSP 1 Score: 89.0 bits (219), Expect = 4.080e-19
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:   54 VVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            + IRV D  GEET+FK++  T M +VF+TYA RKGV  T+LRFLL+GER+  D TP  L+L   D+IDC+ EQ G
Sbjct:   13 ITIRVRDQTGEETFFKIKKTTKMSKVFETYAQRKGVQSTSLRFLLDGERIEPDATPKMLELDDQDQIDCMLEQTG 87          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A7S1YCA7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YCA7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.210e-19
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   46 GQGSAEATVVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            GQ      + IRV D  GEET+FK++  T M +VF+TYA RKGV  ++LRFLL+GER+  D TP  L+L   D+IDC+ EQ G
Sbjct:   41 GQKEGSEPITIRVRDQSGEETFFKIKKTTKMSKVFETYAQRKGVNSSSLRFLLDGERIEGDQTPKMLELDDQDQIDCMLEQTG 123          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A448ZJ15_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ15_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.350e-19
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   54 VVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            + IRV D  GEET+FK++  T M +VF TYA+RKGV +++LRFLL+GER+  D TP  L+L   D+IDC+ EQ G
Sbjct:   15 ITIRVRDQTGEETFFKIKKTTKMSKVFGTYANRKGVQLSSLRFLLDGERIEPDQTPKMLELDDQDQIDCMLEQSG 89          
BLAST of Ec-27_001840.2 vs. uniprot
Match: A0A1E7FWC5_9STRA (Small ubiquitin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWC5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.310e-18
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   46 GQGSAEAT---VVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNGERVGCDDTPASLQLGHHDRIDCLREQPG 128
            G G+ EA    + IRV D  GEET+FK++ +T M +VF+TYA RKGV +++LRFLL+GER+    TP  L+L   D+IDC+ EQ G
Sbjct:    7 GAGAPEAKNEPITIRVRDQTGEETFFKIKKSTKMSKVFNTYAQRKGVQMSSLRFLLDGERIAETMTPQDLELDDQDQIDCMLEQSG 92          
The following BLAST results are available for this feature:
BLAST of Ec-27_001840.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLA0_ECTSI2.640e-4698.65Small ubiquitin-like modifier n=1 Tax=Ectocarpus s... [more]
A0A6H5LH57_9PHAE2.040e-2894.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U5EFS5_9STRA5.300e-2056.00Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2LHD9_9STRA9.830e-2058.67Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
D7FVD5_ECTSI1.670e-1962.12Small ubiquitin-like modifier n=2 Tax=Ectocarpus T... [more]
A0A024TXQ1_9STRA2.600e-1951.81Ubiquitin-like domain-containing protein n=5 Tax=A... [more]
A0A7S1D4N0_CYCTE4.080e-1956.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1YCA7_9STRA4.210e-1951.81Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A448ZJ15_9STRA4.350e-1954.67Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A1E7FWC5_9STRA1.310e-1851.16Small ubiquitin-like protein n=1 Tax=Fragilariopsi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 48..128
e-value: 5.5E-18
score: 67.1
NoneNo IPR availablePANTHERPTHR10562:SF14SMALL UBIQUITIN-RELATED MODIFIER 1coord: 38..128
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 38..128
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 51..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:1501446..1515353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_001840.2Ec-27_001840.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 1499986..1515515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_001840.2 ID=Ec-27_001840.2|Name=Ec-27_001840.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=247bp
MPITSVRASSAGEDTAATSGDGAAAYHFLRTGPTEIMRPAAAAAAGQGSA
EATVVIRVTDLIGEETYFKLRMATPMKRVFDTYADRKGVCVTTLRFLLNG
ERVGCDDTPASLQLGHHDRIDCLREQPGPQYWPFPRTATTADAWEWSRPG
VARQLPQAESDDEEVTAQAEVDLPRAAEGHGGVAQDKQGARDELLPTKAT
RAADAAGVFFCRAASGDEVGRLKTVEAEKMSEGSRQQFRMVQQRGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf