Ec-00_003390.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003390.2
Unique NameEc-00_003390.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length447
Homology
BLAST of Ec-00_003390.2 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 745 bits (1923), Expect = 3.170e-269
Identity = 443/447 (99.11%), Postives = 444/447 (99.33%), Query Frame = 0
Query:    1 MSAAVSNAPASAASAASTTMATDDVEAPALDPTRDQLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAGKKGNRPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXX-ERVEFTGDNAV 446
            MSAAVSNAPASAASAASTTMATDDVEAPALDPTRDQLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAGKKGNRPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAK+PSCPLCKTDLRHATPPDD  RSISTAGXXXXXXXXXXXXXXXXXXXX ERVEFTGDNAV
Sbjct:    1 MSAAVSNAPASAASAASTTMATDDVEAPALDPTRDQLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAGKKGNRPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRSRSISTAGXXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 447          
BLAST of Ec-00_003390.2 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 6.960e-136
Identity = 263/423 (62.17%), Postives = 270/423 (63.83%), Query Frame = 0
Query:   26 EAPALDPTRDQLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAG--KKGNRPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 446
            EAP LDPTRDQLRPGGH TTSGDAAAVELAT LDAGDAA PAG  Q   TPR  EGSSLP L+G+A ++S IFILGDL+NKRMLHP S  VFLLSVSYCVAMLRRQWASTGGGTREG NNSFTKEAR+ELITYFVFGAGPEGLPTEAGA       KKGNRPKQQERGNGASGDELQ+ R                                                                     VL                                               EQ      AA EDDP RA  DSGEWSTGQACIVCFGDYEPGDRLA LPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV
Sbjct:   44 EAPTLDPTRDQLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNSFTKEAREELITYFVFGAGPEGLPTEAGAXXXXXXXKKGNRPKQQERGNGASGDELQLLRL--------------------------------------------------------------------VLSY--------------------------------------------REQPVKVKAAAEEDDPARA-CDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 353          
BLAST of Ec-00_003390.2 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.130e-84
Identity = 167/242 (69.01%), Postives = 171/242 (70.66%), Query Frame = 0
Query:  206 SRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLE-EEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 446
            SRRWRR        XXXXXXX      GGAARNGRIDANNADT GSLSAN P PSTGPCSPAPLE EEV+ GDAATA TA DAA+ ASP HATAAVTA ATP  PELP A G+ A E            DDP RA  D+GEWSTGQACIVCF DYEPGDRLA LPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDD  RSIST G                    E VEFTGDNAV
Sbjct:   13 SRRWRRERQRGSSDXXXXXXXXXXXXXGGAARNGRIDANNADTRGSLSANAPAPSTGPCSPAPLEAEEVVHGDAATAVTAADAALAASPRHATAAVTATATPADPELPGANGDAAEEXXXXXXXXXXXXDDPARA-CDTGEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSISTVGGAGTSVNAARVGGGSGGG--EGVEFTGDNAV 251          
BLAST of Ec-00_003390.2 vs. uniprot
Match: A0A6H5JDD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD0_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 4.450e-63
Identity = 122/143 (85.31%), Postives = 124/143 (86.71%), Query Frame = 0
Query:    1 MSAAVSNAPASAASAASTTMATDDVEAPALDPTRDQLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTG--GGTRE 141
            MSAAVSNAPASAASAA+T     DVEAP L PTRDQLRPGGH T  GDAAAVELAT LDAGDAA PAGGAQL TTPR LEGSSLPFLAGLA IISTIFI+GDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTG  GG  E
Sbjct:    1 MSAAVSNAPASAASAAATMATAGDVEAPTLYPTRDQLRPGGHATMPGDAAAVELATDLDAGDAAAPAGGAQLNTTPRPLEGSSLPFLAGLAAIISTIFIVGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGESGGAME 143          
BLAST of Ec-00_003390.2 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.730e-14
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 0
Query:  346 WSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTA 414
            WS  ++CI+CFG+Y  GD L  LPCRH YHA+CID WLD      CPLCK+ L   + P +   +  TA
Sbjct:   72 WSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSEPRNSSENGETA 140          
BLAST of Ec-00_003390.2 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.170e-13
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 0
Query:  346 WSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDP 407
            WS+G++CI+CFG+Y  GD L  LPCRH YHA+CID WLD      CPLCK+ L    PP +P
Sbjct:  452 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSL---LPPSEP 510          
BLAST of Ec-00_003390.2 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.400e-13
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 0
Query:  344 GEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRS 410
            GE STG +CIVCFGDY  G+ L  L C H+YHA+CIDEWLD      CPLCKTD+   +   DP  S
Sbjct:  244 GEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGS 310          
BLAST of Ec-00_003390.2 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.670e-12
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  344 GEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL 398
            GE ST  +CIVCFGDY  G+ L  L C H+YHA+CIDEWLD      CPLCKTD+
Sbjct:  251 GEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDI 305          
BLAST of Ec-00_003390.2 vs. uniprot
Match: A0A1D1XYA5_9ARAE (E3 ubiquitin-protein ligase RNF13 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XYA5_9ARAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.380e-10
Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 0
Query:  339 AQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLR 399
            A +D GE  T   C +C  D+E GD L LLPC+H YH +CID WL   K  SCPLCKTD R
Sbjct:  125 AVTDDGEVDT---CAICIEDFENGDELRLLPCKHWYHVECIDPWLT-TKSSSCPLCKTDCR 181          
BLAST of Ec-00_003390.2 vs. uniprot
Match: A0A2R6W560_MARPO (RING-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W560_MARPO)

HSP 1 Score: 70.9 bits (172), Expect = 1.040e-9
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  348 TGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHAT 402
            T + C +C  DYEPGD+L +LPC H +H  CID+WL   + P CP+CK D    T
Sbjct:  250 TAETCAICLEDYEPGDKLRMLPCHHEFHTACIDQWL-MTRRPFCPICKRDAHTKT 303          
The following BLAST results are available for this feature:
BLAST of Ec-00_003390.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ1_ECTSI3.170e-26999.11RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI6.960e-13662.17RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE1.130e-8469.01RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JDD0_9PHAE4.450e-6385.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUH7_9PHAE8.730e-1449.28RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI1.170e-1356.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX3_ECTSI2.400e-1356.72RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE3.670e-1261.82RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1D1XYA5_9ARAE4.380e-1055.74E3 ubiquitin-protein ligase RNF13 (Fragment) n=1 T... [more]
A0A2R6W560_MARPO1.040e-949.09RING-type domain-containing protein n=2 Tax=Marcha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 352..394
e-value: 2.3E-6
score: 37.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 351..395
e-value: 9.2E-11
score: 41.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 352..395
score: 12.416
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 313..401
e-value: 1.7E-17
score: 64.8
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 307..397
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..446
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..83
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 345..401
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 111..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3374217..3394331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003390.2Ec-00_003390.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3368306..3395708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003390.2 ID=Ec-00_003390.2|Name=Ec-00_003390.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=447bp
MSAAVSNAPASAASAASTTMATDDVEAPALDPTRDQLRPGGHPTTSGDAA
AVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFIL
GDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKE
ARKELITYFVFGAGPEGLPTEAGAGAGAGKKGNRPKQQERGNGASGDELQ
VSRTSSRRWRRERQRSSGGDDDDIVGGAGVSDGGAARNGRIDANNADTGG
SLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAV
TAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQ
ACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRH
ATPPDDPCRSISTAGGGGTSANAARVGGGSGGGGGERVEFTGDNAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD