Ec-00_003390.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003390.1
Unique NameEc-00_003390.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length590
Homology
BLAST of Ec-00_003390.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 606 bits (1563), Expect = 1.290e-213
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0
Query:  241 VFLSGGEVDARRRAEMSAAVSHAPAXXXXXXXXXXXXXXEAPTLDPTRDQLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNSFTKEAREELITYFVFGAGPEGLPTEAGAXXXXXXXKKGNRPKQQERGNGASGDELQLLRLVLSYREQPVKVKAAAEEDDPARACDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 589
            VFLSGGEVDARRRAEMSAAVSHAPAXXXXXXXXXXXXXXEAPTLDPTRDQLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNSFTKEAREELITYFVFGAGPEGLPTEAGAXXXXXXXKKGNRPKQQERGNGASGDELQLLRLVLSYREQPVKVKAAAEEDDPARACDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV
Sbjct:    5 VFLSGGEVDARRRAEMSAAVSHAPAXXXXXXXXXXXXXXEAPTLDPTRDQLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNSFTKEAREELITYFVFGAGPEGLPTEAGAXXXXXXXKKGNRPKQQERGNGASGDELQLLRLVLSYREQPVKVKAAAEEDDPARACDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 353          
BLAST of Ec-00_003390.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 5.630e-135
Identity = 269/449 (59.91%), Postives = 279/449 (62.14%), Query Frame = 0
Query:  256 MSAAVSHAPAXXXXXXXXXXXXXX-EAPTLDPTRDQLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNSFTKEAREELITYFVFGAGPEGLPTEAGAXXXXXXXKKGNRPKQQERGNGASGDELQLLRL--------------------------------------------------------------------VL--------------------------------------------SYREQPVKVKAAAEEDDPARA-CDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXX-ERVEFTGDNAV 589
            MSAAVS+APA               EAP LDPTRDQLRPGGH TTSGDAAAVELAT LDAGDAA PAG  Q   TPR  EGSSLP L+G+A ++S IFILGDL+NKRMLHP S  VFLLSVSYCVAMLRRQWASTGGGTREG NNSFTKEAR+ELITYFVFGAGPEGLPTEAGA       KKGNRPKQQERGNGASGDELQ+ R                                                                     VL                                            +  EQ      AA EDDP RA  DSGEWSTGQACIVCFGDYEPGDRLA LPCRHVYHAQCIDEWLDRAK+PSCPLCKTDLRHATPPDD  RSISTAGXXXXXXXXXXXXXXXXXXXX ERVEFTGDNAV
Sbjct:    1 MSAAVSNAPASAASAASTTMATDDVEAPALDPTRDQLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAG--KKGNRPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRSRSISTAGXXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 447          
BLAST of Ec-00_003390.1 vs. uniprot
Match: A0A6H5JDD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD0_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 2.340e-49
Identity = 103/143 (72.03%), Postives = 110/143 (76.92%), Query Frame = 0
Query:  256 MSAAVSHAPAXXXXXXXXXXXXXX-EAPTLDPTRDQLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTG--GGTRE 395
            MSAAVS+APA               EAPTL PTRDQLRPGGHAT  GDAAAVELATDLDAGDAAAPAG  Q N TPR  EGSSLP L+G+AA++S IFI+GDL+NKRMLHP S  VFLLSVSYCVAMLRRQWASTG  GG  E
Sbjct:    1 MSAAVSNAPASAASAAATMATAGDVEAPTLYPTRDQLRPGGHATMPGDAAAVELATDLDAGDAAAPAGGAQLNTTPRPLEGSSLPFLAGLAAIISTIFIVGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGESGGAME 143          
BLAST of Ec-00_003390.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.130e-49
Identity = 86/112 (76.79%), Postives = 87/112 (77.68%), Query Frame = 0
Query:  478 DDPARACDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTAGXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 589
            DDPARACD+GEWSTGQACIVCF DYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDD  RSIST G                    E VEFTGDNAV
Sbjct:  142 DDPARACDTGEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSISTVGGAGTSVNAARVGGGSGGG--EGVEFTGDNAV 251          
BLAST of Ec-00_003390.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.380e-15
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 0
Query:  489 WSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSISTA 557
            WS  ++CI+CFG+Y  GD L RLPCRH YHA+CID WLD      CPLCK+ L   + P +   +  TA
Sbjct:   72 WSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSEPRNSSENGETA 140          
BLAST of Ec-00_003390.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.130e-14
Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = 0
Query:  445 ERGNGASGDELQLLRLVLSYREQPVKVKAAAEEDDPARACDSGE---WSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDP 550
            E G G SG +  +       +  P + +   +++ P R    G    WS+G++CI+CFG+Y  GD L RLPCRH YHA+CID WLD      CPLCK+ L    PP +P
Sbjct:  408 ESGEGGSGSKPSV---AGPEKRPPPEGEEFDDKEVPERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSL---LPPSEP 510          
BLAST of Ec-00_003390.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.220e-14
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  487 GEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRS 553
            GE STG +CIVCFGDY  G+ L RL C H+YHA+CIDEWLD      CPLCKTD+   +   DP  S
Sbjct:  244 GEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGS 310          
BLAST of Ec-00_003390.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.380e-13
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  487 GEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL 541
            GE ST  +CIVCFGDY  G+ L RL C H+YHA+CIDEWLD      CPLCKTD+
Sbjct:  251 GEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDI 305          
BLAST of Ec-00_003390.1 vs. uniprot
Match: A0A1X7STB2_AMPQE (RING-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7STB2_AMPQE)

HSP 1 Score: 65.5 bits (158), Expect = 1.480e-9
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 0
Query:  460 LVLSYREQPVKVKAAAEEDDPARACDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLR 542
            +V S++ +  +   A +   P R  + G      AC +C  D++ G  + +LPC H++H  CIDEWL R     CP CK +LR
Sbjct:    1 MVRSFKRRARRKSLADKLVIPTRRYEEGRQEKHVACNICLEDFKTGTNVRQLPCEHIFHPSCIDEWLSRHSC-VCPNCKMNLR 82          
BLAST of Ec-00_003390.1 vs. uniprot
Match: A0A1D1XYA5_9ARAE (E3 ubiquitin-protein ligase RNF13 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XYA5_9ARAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.660e-9
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0
Query:  485 DSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLR 542
            D GE  T   C +C  D+E GD L  LPC+H YH +CID WL   K  SCPLCKTD R
Sbjct:  128 DDGEVDT---CAICIEDFENGDELRLLPCKHWYHVECIDPWLT-TKSSSCPLCKTDCR 181          
The following BLAST results are available for this feature:
BLAST of Ec-00_003390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ0_ECTSI1.290e-213100.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI5.630e-13559.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JDD0_9PHAE2.340e-4972.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEY0_9PHAE4.130e-4976.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE8.380e-1550.72RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI1.130e-1441.28RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX3_ECTSI2.220e-1458.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE3.380e-1363.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1X7STB2_AMPQE1.480e-934.94RING-type domain-containing protein n=1 Tax=Amphim... [more]
A0A1D1XYA5_9ARAE1.660e-955.17E3 ubiquitin-protein ligase RNF13 (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 495..537
e-value: 4.3E-6
score: 36.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 494..538
e-value: 1.5E-10
score: 41.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 495..538
score: 12.15
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 463..544
e-value: 5.0E-16
score: 60.1
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 464..546
NoneNo IPR availablePANTHERPTHR22765:SF209PROTEIN SAN1coord: 464..546
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 363..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 383..589
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 358..362
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 489..544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3374217..3380028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003390.1Ec-00_003390.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3374217..3380028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003390.1 ID=Ec-00_003390.1|Name=Ec-00_003390.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=590bp
MLVVDAAFHSPQIDQFPEGTACLLLLLGAAIYLKHLLSSTRWLASRPQRE
NTTLLTLFDTAVVLFSFPASHRIQHASPKLSPNHRFKCIRTFFFFLIFFF
HQYDPTNVRGLHSRERLSLCLQDSSRRKFLNPSCELSLNWNLHAEHFRLE
ARTTRLHSLGRAVVLRPHASWTHPISRLARHVRVGATSRAHRPRSRVERR
SSVPARTFSGGGHKNVSNTRREPCCLLTPLGEPSRTGVRLVFLSGGEVDA
RRRAEMSAAVSHAPASAASAAATRATADVEAPTLDPTRDQLRPGGHATTS
GDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSM
IFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNS
FTKEAREELITYFVFGAGPEGLPTEAGAGAGAGAGKKGNRPKQQERGNGA
SGDELQLLRLVLSYREQPVKVKAAAEEDDPARACDSGEWSTGQACIVCFG
DYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDP
CRSISTAGGGGTSANAARVGGGSGGGGGERVEFTGDNAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD