Ec-00_003360.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003360.1
Unique NameEc-00_003360.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length413
Homology
BLAST of Ec-00_003360.1 vs. uniprot
Match: D7FRP7_ECTSI (General transcription factor IIH subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP7_ECTSI)

HSP 1 Score: 779 bits (2012), Expect = 6.070e-284
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
Query:    1 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC 412
            MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC
Sbjct:    1 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC 412          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A835ZF22_9STRA (General transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF22_9STRA)

HSP 1 Score: 468 bits (1205), Expect = 2.060e-161
Identity = 237/401 (59.10%), Postives = 292/401 (72.82%), Query Frame = 0
Query:   14 GYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRR-VGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSG-LPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC 412
            GYAWEK FER+WE V+EDE GN+KT  E   R  R RR  + G++IKRGMIRY++L IDLSK M++ DMRP+RLAVT ++V +FV  +FDQNPLSQLGI++TR+GRAE++T+LSGNPKAH+EAL +  DT+GE SLQNLLE+    L + PEYG+RE VV+Y SL TCDPG+I +TIA LK HKVR SVVGLGAE+++ RR+ E+T GD+ +A DE+HY++SL+AQCTPPPT   + G  FADLV MGFP      F +LGYSG +Q L+  GY CPRCK KT+ELPS C ICALPLVSSPHLARSYHHLFPVP FDE  A+A                            ++A+ S C  CLR  +    R+ CP C+ AFCL+CDMY+HDSLHNCPGCC
Sbjct:   24 GYAWEKSFERSWEDVQEDEQGNLKTDHERDARLSRGRRTALYGQAIKRGMIRYVFLCIDLSKGMSETDMRPNRLAVTTKVVAEFVRGFFDQNPLSQLGIIITRDGRAERVTDLSGNPKAHIEALARSLDTQGEPSLQNLLELTAHCLASAPEYGSREAVVLYGSLHTCDPGNILDTIALLKRHKVRCSVVGLGAEVYIARRIAEDTGGDFVVAVDEHHYKDSLLAQCTPPPTL-AKRGPHFADLVEMGFPRRVDGTF-ALGYSGRQQTLTAQGYYCPRCKIKTTELPSTCEICALPLVSSPHLARSYHHLFPVPPFDEQEASA--------------------------AADTAAQS-CEACLRPFAAKASRFMCPNCKGAFCLECDMYIHDSLHNCPGCC 395          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A7S2Y0G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G9_9STRA)

HSP 1 Score: 355 bits (912), Expect = 3.240e-116
Identity = 197/431 (45.71%), Postives = 258/431 (59.86%), Query Frame = 0
Query:    8 DDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRR----------------NRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPT----PPGREGA---MFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQF-----------DEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSS--------YCAGCLRDLSGLP-RYRCPECRSAFCL 395
            D+    GYAWEKGFERTWE VEEDE G ++  E   RR                ++         ++KRGMIR LYLA+DLSK MA+GD RP+R+A     + DF+  YFDQNPLSQLGI++TR+G  ++++ELSG+P+A + AL +   T+G ASLQN LEMA  SL+A PEY +REVVV+Y SLSTCDPGDIH T+ +L+  +VR SVV L AE+F+ R++ E T G + +A D  H RE +MA C PPPT    P G +G    ++ADLV+MGFP +  D+ P+L +SG +Q  S  GY+CPRC +++++LP  C IC LPLVSSPHLARSYHHLFPVP+F           DE  A                             +  +SS         +C GCL  L      + CP+C  A+CL
Sbjct:   23 DEGQEGGYAWEKGFERTWEAVEEDEDGRLQLEELDSRRQLLEXXXXXXLLLEDYSQDPSAAGTAGAVKRGMIRSLYLALDLSKAMAEGDFRPNRMAAAAAALIDFIQEYFDQNPLSQLGIVITRDGICQRVSELSGSPQAQVNALKRALHTRGSASLQNTLEMALASLKATPEYASREVVVVYGSLSTCDPGDIHATLERLQKARVRVSVVHLSAELFICRKVVEGTGGAHGVAKDAGHMRELIMAHCRPPPTRSGGPQGGDGKCGPIYADLVKMGFPRQRSDLRPTLAFSGRQQVFSSEGYTCPRCLSRSTDLPCTCSICGLPLVSSPHLARSYHHLFPVPRFAEKNKEKQAKADEEGAGGKGAEGAGDNKGPGGAVASSNPKSRNDRQVPSSSQPPPVGALQHCTGCLVPLRDEDVTFTCPKCNQAYCL 453          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A6G0W889_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W889_9STRA)

HSP 1 Score: 350 bits (898), Expect = 2.960e-115
Identity = 187/412 (45.39%), Postives = 252/412 (61.17%), Query Frame = 0
Query:    4 MDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTRE----EGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            MDD ++    GYAWE  FER+W+G+EEDE G +K        G +   R+RR+   + +++G+IRY+++ +DLSK M+  D +P R AV    VQ F+ +YFDQNP+SQLG++  +  +AEK+T+LSGNP  HME L +     GE SLQN LEMA  +L+ VP YG++E++V+Y SL+T DPGDI  T++ L+   +R S VG+GAEM +LRR+ ++T G YS+A D  H RE L A  TP P+      A FA LV MGFP +      +L      Q+ +  GY CPRCK+K+ ELP+ C +C LPLVSSPHLARSYHHLFPV  FD++                                +  S + C  CL  L+    YRCP C+  FC +CDMY+HDSLHNCPGC
Sbjct:    1 MDDEENT--KGYAWEGSFERSWDGIEEDESGALKVHSIAASSGDKA--RLRRQQMLQRVRKGLIRYVFVIVDLSKGMSQKDWKPHRCAVVTEEVQRFIADYFDQNPISQLGLIGIKSAKAEKLTDLSGNPSQHMEVLKRALTVHGEPSLQNALEMARNALKIVPSYGSKEIIVVYGSLTTTDPGDIFATLSSLQRESIRCSFVGMGAEMHLLRRIAKDTHGTYSVALDPPHMRELLSAFTTPCPSL-ASSAARFATLVEMGFPQKRSG---ALSLCVCHQQFTTMGYLCPRCKSKSCELPTVCAVCNLPLVSSPHLARSYHHLFPVVNFDKV--------------------------------DHPSEAKCFACLVRLTH--GYRCPTCQHVFCSECDMYIHDSLHNCPGC 370          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A485LTD2_9STRA (Aste57867_24758 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD2_9STRA)

HSP 1 Score: 350 bits (897), Expect = 4.630e-115
Identity = 188/406 (46.31%), Postives = 251/406 (61.82%), Query Frame = 0
Query:    8 DDNDGAGYAWEKGFERTWEGVEEDEHGNIKTRE--EGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            DD +  GYAWE  FER+W+G+EEDE G +K +   +      R+RR+   + +++G+IRY+Y+ +DLSK M+  D +P R AV    VQ FV +YFDQNP+SQLG++  +   AEK+++LSGNP  H+E L +     GE SLQN LEMA  +L+ VP YG++E+VV+Y SL+T DPGDI  T++ L+   +R S VG+GAEM +LRR+ +ET G YS+A D++H+RE + A  TP P+      A FA LV MGFP +      +L      Q  +  GY CPRCK+K+ ELP+ C +C LPLVSSPHLARSYHHLFPV  FD+                              T +E  ++  C  CL  L+    Y CP C  AFC DCDMY+HDSLHNCPGC
Sbjct:    3 DDENAKGYAWEGSFERSWDGIEEDESGALKVQAFVQSSGDKARLRRQQMLQRVRKGLIRYVYVVVDLSKGMSQKDWKPHRCAVVTEEVQRFVADYFDQNPISQLGLIGIKSAIAEKLSDLSGNPGHHIEILKRTLTVHGEPSLQNALEMARNALKIVPSYGSKEIVVVYGSLTTTDPGDIFATLSSLQRESIRCSFVGIGAEMHLLRRIAKETHGTYSVALDQSHFRELMAAFTTPCPSL-ASSVAKFATLVEMGFPQKRSG---ALSLCVCHQNFTTMGYLCPRCKSKSCELPTTCAVCNLPLVSSPHLARSYHHLFPVVNFDK-----------------------------KTVKEIKTAK-CFSCLVPLNS-HAYVCPTCNHAFCSDCDMYIHDSLHNCPGC 373          
BLAST of Ec-00_003360.1 vs. uniprot
Match: D8S216_SELML (General transcription factor IIH subunit n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S216_SELML)

HSP 1 Score: 342 bits (878), Expect = 6.600e-112
Identity = 182/403 (45.16%), Postives = 256/403 (63.52%), Query Frame = 0
Query:   16 AWEKGF--ERTWEGVEEDEHGNIKTREEGQRRNRRVRRRV--GGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSG-YSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLP--RYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            AWE+ +  +R+WE + EDE G +K  ++ Q++ +  RR +   G  I+RG+IRYL L +D S+   + D RPSR+AV  + V+DFV  YFDQNPLSQLGI+V + G A  +TELSG+P+AH+ AL  + ++ GEASLQN LE+A T ++ +P YG+REVV+++S+LSTCDPG+I ET+ K K  +++ SVVGL AE+++ + +++ET G Y++A +E H +E L+    PP   P    A  A LVRMGFP    +   ++      +EL + G Y CPRC+ +  ELP+EC +C L LVSS HLARSYHHLFP+P FDE+   A                        +   +S+ +  C GC   LSG    R RCP C+  FC DCD+Y+H+SLHNCPGC
Sbjct:   12 AWERAYADDRSWESLIEDESGLLKAGDDVQQQRQHRRRLIQASGPRIQRGIIRYLCLILDFSRAAGEIDFRPSRMAVVAKAVEDFVREYFDQNPLSQLGIIVMKNGIASVVTELSGSPEAHIRALKSNLESFGEASLQNGLELAHTYVQHIPSYGHREVVIVFSALSTCDPGNILETVKKCKAARMKCSVVGLTAEIYICKHISQETGGSYAVAMNEGHLKEILLEHVPPPAAMPD---ASSASLVRMGFPQRGSE--GAVAICACHKELKIGGGYICPRCRARVCELPTECSLCGLALVSSAHLARSYHHLFPIPTFDELLVDA------------------------SLRGKSSFAGSCFGCRIQLSGSGSLRLRCPRCKRDFCFDCDVYIHESLHNCPGC 385          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A067C818_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C818_SAPPC)

HSP 1 Score: 341 bits (875), Expect = 9.750e-112
Identity = 182/408 (44.61%), Postives = 246/408 (60.29%), Query Frame = 0
Query:    8 DDNDGAGYAWEKGFERTWEGVEEDEHGNIKT----REEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            DD+ G GYAWE  FER+W+G+EEDE G +K        G +   R+RR+   + +++G+IRY+Y+ IDLSK M+  D +P R AV    VQ FV +YFDQNP+SQLG++  +   AEK+++LSGNP  H++ L +     GE SLQN LEMA ++L+ VP YG++E+VV+Y SL+T DPGDI  TI  L+   +R S V +GAEM +LRR+ ++T G YS+A D NH+++ + A   P P+        FA LV MGFP        +L      Q  + +GY CPRCK+K+ ELP+ C +C LPLVSSPHLARSYHHLFP+  +++  A                              +   +  C GCL  L  L  Y CP C   FC DCD+Y+HDSLHNCPGC
Sbjct:    3 DDDQGKGYAWEGSFERSWDGIEEDESGALKLGAFMTSSGDKS--RLRRQEMLQRVRKGLIRYVYVIIDLSKGMSQKDWKPHRCAVVTEEVQRFVADYFDQNPISQLGLIGIKSSVAEKLSDLSGNPGHHIDILKRTITVHGEPSLQNALEMAKSALKTVPSYGSKEIVVVYGSLTTTDPGDIFATITALQKDSIRCSFVSIGAEMHLLRRIAKDTQGTYSVAMDPNHFKDLISAFTIPSPSL-ATAATKFATLVEMGFPQRRSG---ALSLCVCHQVFTTTGYLCPRCKSKSCELPTVCAVCNLPLVSSPHLARSYHHLFPIANYEKRSA------------------------------DELRTRKCFGCLGALQNLG-YECPTCTHVFCNDCDLYIHDSLHNCPGC 373          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A2P6N5T3_9EUKA (General transcription factor IIH subunit n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N5T3_9EUKA)

HSP 1 Score: 341 bits (874), Expect = 1.910e-111
Identity = 181/413 (43.83%), Postives = 259/413 (62.71%), Query Frame = 0
Query:    1 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDS-DTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDE-IPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            MD+ D+ ++     Y WEKG ++TWE + ED+  +++ +E  +R+ R  ++ +  +++++GM RY+++ +DLSK++ D DM+PSRL V ++ V+ F+ +YFDQNPLSQ+G++V R   AEKITELSGNP  H+  LT  S +  GE SLQN LE+A ++L  VP YG+RE++++  SLSTCDPGDI ET+  LK   ++  ++GL AE++V R +TE TSG Y +A +E H+RE L+    PPP+    E      L++MGFP    D+ PSL      Q+    GY CP+C++K  ELP++C +C L L+SSPHLARSYHHLFPVP F E +P  A                           +E+A    C  C   LS    Y CP+C+  FC +CD Y+HDSLHNCPGC
Sbjct:    1 MDSDDEKEER--RSYNWEKGIDKTWENIGEDDS-DLRAQER-KRKKRSTQKAI--QNVRKGMTRYVFVVLDLSKSILDKDMKPSRLTVAVKTVEAFILDYFDQNPLSQMGVIVARSSLAEKITELSGNPSKHISTLTSTSTNVSGEFSLQNSLEVARSTLCYVPAYGSREIIIVSGSLSTCDPGDIFETVELLKKEGIKVHIIGLSAEVYVCRAVTERTSGSYHVALNEPHFRELLLNLSPPPPSSSKTE----TRLIKMGFPQRRADISPSL--CACHQQPKYGGYYCPQCQSKCCELPTDCQVCGLTLISSPHLARSYHHLFPVPYFIEHVPPVAQKTFG---------------------RDEAA----CLSCRVALSQAAVYTCPQCKGNFCTECDDYIHDSLHNCPGC 376          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A7R9YAF6_9STRA (General transcription factor IIH subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAF6_9STRA)

HSP 1 Score: 341 bits (875), Expect = 3.800e-111
Identity = 180/424 (42.45%), Postives = 258/424 (60.85%), Query Frame = 0
Query:    1 MDAMDDHDDNDGAG-YAWEKGFERTWE-GVEEDEHGNIKTRE-EGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGD--MRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKD-SDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDE--IPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSG-----LPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            M+ +D  DD    G +AWE+    TW+ G++EDEHGN++ R+     R R+  +     +++RGMIRY+YL +D S  M DGD  M+PSR+ V    V DF+ N+FD+NP+S LG++V+R+G  +K+T L GNP  H++AL +D ++  G AS+QN LE+A   L+ VP+YG +EV+++Y SL++ DPGDIH TI  LK   +R SV+ L AE++V +R+ E T GD+ +  D +  R    A   PPPTP   +      LVRMGFP   +   PS  ++G+++ L  +GY CP C  KT++LPS C++C+LPLVSS  LARSYHHLFPVP +D+  +P  A                         +   S+    C+GCL DLS      + R RCP C+  +C DCD+++HD LHNCP C
Sbjct:   11 MEPLDGEDDLSLRGRHAWEQVSSHTWQTGLDEDEHGNLQYRQVSALERWRKASKNRDARTVRRGMIRYVYLILDKSLAMLDGDVDMQPSRVVVMQVHVADFIRNFFDENPISNLGVIVSRDGAGDKLTALGGNPTVHLQALEEDGTNCAGMASIQNSLELAMALLKTVPQYGTKEVILVYGSLTSTDPGDIHTTIESLKQEGIRVSVINLVAEIYVCKRIAEATGGDHRVVLDLDSLRAHFAAHVRPPPTPSSAKVVKAPTLVRMGFPRRIETSVPSFAFAGDQERLCEAGYVCPECTVKTTDLPSTCMVCSLPLVSSAQLARSYHHLFPVPLYDQDDLPGKA------------------DAEDLELSPRNSSEKPRCSGCLVDLSARIERDVVRLRCPTCKQLYCGDCDIFIHDELHNCPTC 416          
BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A1Y1VZC9_9FUNG (General transcription and DNA repair factor IIH n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1VZC9_9FUNG)

HSP 1 Score: 338 bits (866), Expect = 5.530e-110
Identity = 181/405 (44.69%), Postives = 259/405 (63.95%), Query Frame = 0
Query:   14 GYAWEKGFERTWEGVEEDEHGNIKTREEG-QRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDS--DTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFP---AETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLP-RYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
            GYAWE+ ++R+W+ ++EDE G++++  +G Q + +R RR     +I+RG+IR++ L ID S+ M   DMRP+R+A TL+I++ FV  YFDQNP+SQL I+ T++G AEK+T+LSGNP  H+ AL   S  D  GE SLQN LE+A  +LR  P +G+RE+V I+ SL+TCDPGDI +T A LK  +VR S+V L AE+ V +R+ +ET+G +++A DE H ++ L  +C PPP  P       +D+++MGFP   +  Q   P + +     ELS SGY CPRC++K   LP++C +C LPLVS+PHLARSYHHLFP   + EI                            +  E S +   C GC  ++ G   RY+CP CR  FCL+CD+++H++LHNCPGC
Sbjct:   27 GYAWEEEYKRSWDVIQEDESGSLQSAVQGIQEQLKRKRRLRDTTAIQRGIIRHVILVIDGSENMGTRDMRPTRIAATLQILESFVNEYFDQNPISQLAIISTKDGLAEKLTDLSGNPLDHVNALRDKSNKDLAGEPSLQNALELAMHTLRRAPTHGSREIVCIFGSLTTCDPGDIKQTQAALKHAEVRVSMVQLAAEVQVFKRICQETNGLFAVADDEIHLKDMLF-ECIPPP--PVVSAKATSDMIQMGFPIRASNAQVPTPCVCH----HELSFSGYICPRCRSKVCSLPTDCDVCGLPLVSAPHLARSYHHLFPEENYREIDVEV-----------------------HSGAEHSGAGLVCFGCEGEVKGAAARYQCPRCRKEFCLECDVFIHETLHNCPGC 401          
The following BLAST results are available for this feature:
BLAST of Ec-00_003360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRP7_ECTSI6.070e-284100.00General transcription factor IIH subunit n=2 Tax=E... [more]
A0A835ZF22_9STRA2.060e-16159.10General transcription factor IIH subunit n=1 Tax=T... [more]
A0A7S2Y0G9_9STRA3.240e-11645.71Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6G0W889_9STRA2.960e-11545.39Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LTD2_9STRA4.630e-11546.31Aste57867_24758 protein n=1 Tax=Aphanomyces stella... [more]
D8S216_SELML6.600e-11245.16General transcription factor IIH subunit n=4 Tax=S... [more]
A0A067C818_SAPPC9.750e-11244.61Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A2P6N5T3_9EUKA1.910e-11143.83General transcription factor IIH subunit n=1 Tax=P... [more]
A0A7R9YAF6_9STRA3.800e-11142.45General transcription factor IIH subunit n=1 Tax=P... [more]
A0A1Y1VZC9_9FUNG5.530e-11044.69General transcription and DNA repair factor IIH n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 63..239
e-value: 2.0E-8
score: 44.0
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 65..216
score: 8.844
IPR004595TFIIH C1-like domainSMARTSM01047C1_4_2coord: 370..412
e-value: 1.8E-13
score: 60.8
IPR004595TFIIH C1-like domainPFAMPF07975C1_4coord: 382..411
e-value: 6.0E-13
score: 48.8
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 59..244
e-value: 3.4E-68
score: 230.9
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 64..232
IPR012170TFIIH subunit Ssl1/p44TIGRFAMTIGR00622TIGR00622coord: 285..411
e-value: 1.3E-27
score: 94.7
IPR012170TFIIH subunit Ssl1/p44PIRSFPIRSF015919TFIIH_SSL1coord: 2..412
e-value: 2.2E-137
score: 456.3
IPR007198Ssl1-likePFAMPF04056Ssl1coord: 70..262
e-value: 1.2E-71
score: 240.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 358..412
e-value: 6.5E-18
score: 66.5
NoneNo IPR availablePANTHERPTHR12695GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2coord: 10..412
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 320..411
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 386..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3338258..3343947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003360.1Ec-00_003360.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3338233..3344961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003360.1 ID=Ec-00_003360.1|Name=Ec-00_003360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=413bp
MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVR
RRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNY
FDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQN
LLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRAS
VVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREG
AMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPS
ECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPAAAAAAASAGSAGG
MGSGAGAGRATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMY
VHDSLHNCPGCC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR004595TFIIH_C1-like_dom
IPR036465vWFA_dom_sf
IPR012170TFIIH_SSL1/p44
IPR007198Ssl1-like
IPR013083Znf_RING/FYVE/PHD
IPR013087Znf_C2H2_type