Ec-00_003350.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003350.1
Unique NameEc-00_003350.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length188
Homology
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A6H5JR22_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR22_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 2.350e-89
Identity = 148/187 (79.14%), Postives = 148/187 (79.14%), Query Frame = 0
Query:    1 MNAAAGRICGAASVAANRHCRLRRIVISAATAMPPRTAAGSRFVRQASSATTLPDDD-VLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKT 186
            MNAA GR CGAASVA NRHCRLRR VISAA                            VLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYA GDAPVEG TVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEE ENVRALSG TSP VDCY GAGEG RIATYQGYLNHKT
Sbjct:    1 MNAA-GRFCGAASVAVNRHCRLRRKVISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYALGDAPVEGGTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEVENVRALSGVTSPGVDCYGGAGEGLRIATYQGYLNHKT 186          
BLAST of Ec-00_003350.1 vs. uniprot
Match: D7FRP6_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP6_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.930e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
Query:   63 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE 187
            MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE
Sbjct:    1 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE 125          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A836CE97_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE97_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.600e-26
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   44 VRQASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPG-DAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSP---SVDCYSGAGEGFRIATYQGYLN 183
            +R +S+A  +P D  L+LPMP+LSPSM   T+ KWL + GDE  EY+A L + TD+L A G   P    +  MVVEL E GF+ KL   EG+TV VG+ +  +CEEE++V AL   T      V  Y   G G ++   Q +L+
Sbjct:   21 LRASSTAKGMPHD-TLWLPMPRLSPSMKTGTIKKWLLSPGDEFGEYEAALTIDTDTLVAEGLKTPESSGSTSMVVELLEAGFMAKLLRKEGETVRVGEPIALLCEEEDSVSALQSDTLDIPHDVQLYE-EGNGHKVPQLQAFLD 162          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A8J9WR07_9CHLO (Probable dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR07_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 4.550e-15
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   57 DVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSL----YAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYL 182
            +V+ +PMPKLSPSMT  T+++WLKA GDEI EYD I+E+ T  L    Y  G       +V ++VE  E G +    V +G  V+VG  V  M E+ +++  L G   P      G+ +  R   +Q YL
Sbjct:    7 NVIVVPMPKLSPSMTEGTISRWLKAPGDEIVEYDIIMEVDTQELTEAAYKVGKF---AGSVTLLVEAQEDGIMHSHLVPQGKQVKVGTPVALMAEQGQSLPDLDGYKPPENVYAEGSQD--RTLIWQSYL 131          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7S0IYL7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IYL7_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 2.410e-12
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 0
Query:   35 PRTAAGSRFVRQASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENV 152
            PRT   S+ +R   S     +     +PMP+LSPSM+R  + +W  + GD+I+ YD + ++STD L     +P    T  + VE  E G++ K+ VAEG        +  +CE EE+V
Sbjct:   11 PRTMPFSQQIRHFPSGCAHANVSYKLMPMPRLSPSMSRGVLERWHLSAGDQISTYDLVCDVSTDELLDEPSSP----TFVLEVESHEDGWLAKVLVAEGGAAAPDMPIAVICENEEDV 124          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7S0YW53_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YW53_9CRYP)

HSP 1 Score: 70.5 bits (171), Expect = 2.490e-12
Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 0
Query:   61 LPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSG---ATSPSVDCYSGAGE-GFRIATYQGYL 182
            +PMPKL+P M  A ++KWL  EGDE++  D + EL  + L        E     M++E  E GFV +L  AEG  V   + ++ +C++E +    +G      PS +  SG+G+ G R+  +Q Y+
Sbjct:    1 MPMPKLTPQMESAVLSKWLIKEGDEVSAGDLVCELEVEGLNP------ELPHATMLIETHEAGFVARLLEAEGSRVAADRGILVLCDDEASKDQFAGYERKDGPSPN--SGSGDSGARVFCWQAYV 118          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7S0L0Q4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L0Q4_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 8.930e-11
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   41 SRFVRQASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDT 135
            SR    AS A+ LP   ++  PMP+LSPSMTR  + KWL A GD ++ YD + ++STD L    D P  G+ V + +E  E G++ K  +AEGD+
Sbjct:   19 SRCSSSASRASFLPPHKLM--PMPRLSPSMTRGVLDKWLVAAGDAVSTYDLLCDVSTDELL---DEPKSGTHV-LEMESHEDGWLAKGLLAEGDS 107          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A2E3SNU1_9BACT (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2E3SNU1_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 3.110e-10
Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   63 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPS 162
            MPKL  S+  AT+TKWLK+EGD+I E DAI+E++TD + +   +PVEG  V             K   +EGD VEVG+ V+A  E E    A     SP+
Sbjct:    8 MPKLGESIIEATITKWLKSEGDQIEEDDAIVEIATDKVDSEIPSPVEGKLV-------------KALFSEGDVVEVGK-VIAYIEVEGMETAEESQESPT 93          
BLAST of Ec-00_003350.1 vs. uniprot
Match: UPI001557D946 (2-oxo acid dehydrogenase subunit E2 n=2 Tax=unclassified Lentimicrobium TaxID=2677434 RepID=UPI001557D946)

HSP 1 Score: 67.8 bits (164), Expect = 5.830e-10
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   63 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQ--AVMAMCEEEEN 151
            MPKL  S+  AT+TKWLK EGD ++E DAILE++TD + +   +PVEG  +  + E             EGD + VG+  A++AM  +EE+
Sbjct:    8 MPKLGESIIEATITKWLKVEGDSVDEDDAILEIATDKVDSEIPSPVEGKIIKTLYE-------------EGDVIAVGEVIAIIAMDGDEED 85          
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7C0VZ72_9BACT (Dihydrolipoyllysine-residue acetyltransferase (Fragment) n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A7C0VZ72_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.350e-9
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   60 YLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRAL 155
            Y+ MPKL  +M + TV +WLK EGD I E + +LE+ TD    P +AP  G              + K+ V EG+T+ V   +  + EE+E+++ L
Sbjct:    4 YIIMPKLGFNMDQGTVVRWLKKEGDAIEEREEVLEIETDKTVMPVEAPCSG-------------ILRKILVEEGETIAVTLPIGIIAEEKEDIQPL 86          
The following BLAST results are available for this feature:
BLAST of Ec-00_003350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR22_9PHAE2.350e-8979.14Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
D7FRP6_ECTSI1.930e-83100.00Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A836CE97_9STRA2.600e-2643.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J9WR07_9CHLO4.550e-1538.46Probable dihydrolipoyllysine-residue acetyltransfe... [more]
A0A7S0IYL7_9EUKA2.410e-1234.75Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0YW53_9CRYP2.490e-1234.13Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0L0Q4_9EUKA8.930e-1143.16Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A2E3SNU1_9BACT3.110e-1043.00Dihydrolipoamide acetyltransferase component of py... [more]
UPI001557D9465.830e-1041.762-oxo acid dehydrogenase subunit E2 n=2 Tax=unclas... [more]
A0A7C0VZ72_9BACT1.350e-935.42Dihydrolipoyllysine-residue acetyltransferase (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.100coord: 57..165
e-value: 2.2E-25
score: 90.4
NoneNo IPR availablePANTHERPTHR23151DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATEDcoord: 44..161
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 62..144
e-value: 1.2E-8
score: 34.6
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 58..147
score: 16.545
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 60..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3336103..3338002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003350.1Ec-00_003350.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3335595..3338093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003350.1 ID=Ec-00_003350.1|Name=Ec-00_003350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=188bp
MNAAAGRICGAASVAANRHCRLRRIVISAATAMPPRTAAGSRFVRQASSA
TTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSL
YAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEE
NVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif