Ec-00_002910.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_002910.1
Unique NameEc-00_002910.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length172
Homology
BLAST of Ec-00_002910.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 2.670e-113
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query:    1 MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR 172
            MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR
Sbjct:  224 MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR 395          
BLAST of Ec-00_002910.1 vs. uniprot
Match: D7FN39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN39_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 7.200e-94
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
Query:    1 MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNAR 133
            MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNAR
Sbjct:    1 MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNAR 133          
BLAST of Ec-00_002910.1 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.820e-28
Identity = 73/181 (40.33%), Postives = 98/181 (54.14%), Query Frame = 0
Query:    5 RMGSFKRASGMED--------DDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTST------------FPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGL 165
            R+  F++ASG++          D D N F  ++   +PQ     PSA ++R + V N  +   YL WR T T            F P  G          W W F++ E  L IA+W+G  QRLF VQR+++TMDDI   DD VGYN+RV ILLPT GE L+VV KAL+G +S R WD+ +
Sbjct:  300 RITEFQKASGVKAYGVMDGGVSDVDPN-FLTKMNKPDPQGMTPLPSAFVIRAIVVLNICVSCAYLWWRVTRTIFQIDDYFFGIPFLPVQG----------WAWAFYAVEICLTIAIWIGHTQRLFAVQRVRLTMDDIVREDDSVGYNSRVAILLPTNGEKLDVVMKALLGVVSLRGWDTSV 469          
BLAST of Ec-00_002910.1 vs. uniprot
Match: D7FSC4_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC4_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 8.160e-27
Identity = 67/141 (47.52%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   25 FFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTST--FPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDS 163
            F  R    NPQ K  F S+ L+R + V N   G  Y+ WR+  T   PP   +W           +FF  E FL  A+W+G +QRLF VQRI+ TMD I S+D  VG NA V ILLPTAGE L+VV K L+GA SQR W S
Sbjct:   72 FVQRGEKINPQTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQDVPPEY-KWXXX--------VFFMVEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPS 203          
BLAST of Ec-00_002910.1 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.120e-26
Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 0
Query:    5 RMGSFKRASGMEDDDQDSNLFFD------RVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLY----WWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSG 164
            R+ SF  A+G+   +     + D      + +  NPQ      S  L+R++  AN G   LYL+WR TST   T+  + Y   K +    W W+F+  E  L I + +G  QR+FP++R  V M+D+   DD VGYNARV ILLP+AGE L++V  AL+GA+SQ  W  G
Sbjct:  175 RVNSFAAAAGLRPSEAAGGAYADDAVVLKQQFKPNPQAFFALGSTPLLRLIMAANVGFSALYLYWRATSTIT-TIDTYFYNI-KYFPVQIWAWVFYGVEICLTIGILIGHTQRMFPIKRAIVAMEDLVREDDCVGYNARVAILLPSAGERLDIVMLALLGAMSQSTWRGG 342          
BLAST of Ec-00_002910.1 vs. uniprot
Match: A0A835YVP7_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP7_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.240e-18
Identity = 55/135 (40.74%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   33 NPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKL---YWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSG 164
            +PQ      S  L+R + +AN    VLYL WR TST   T+  + +    L    W W F++ E  L I +W+G +QRLF V                  YNARVCILLPTAGE L++V  AL+G +SQR+W  G
Sbjct:   10 DPQRTTPMSSHLLIRCVILANLAFSVLYLWWRVTSTIT-TINSYFFGIKALPVQAWGWTFYAVEICLTIGIWIGHSQRLFAVS----------------SYNARVCILLPTAGERLDIVMLALLGCISQRMWACG 127          
BLAST of Ec-00_002910.1 vs. uniprot
Match: A0A835YSM9_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.300e-18
Identity = 57/172 (33.14%), Postives = 87/172 (50.58%), Query Frame = 0
Query:    1 MTGSRMGSFKRASGM-------EDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGL 165
            M+ +R+  +++ASG+       +    D   F  +V   +PQ     PSA ++R + + N G+ + YL+WR T T       +  ++W                            PV RIK+TMD++   DD VGYN+RV ILLPT GENL+VV KA++G +S R WD+ +
Sbjct:   71 MSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITW---------------------------LPV-RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASV 214          
BLAST of Ec-00_002910.1 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.950e-13
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0
Query:   85 WWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR 172
            W ++FF AE  L + + V    R FP+ R +VTMD++   D Q G + +V ILLPTAGE L+V+ +AL G L  RLW S      TLR
Sbjct:   27 WGYIFFGAEVLLIVGLLVSHVSRAFPIHRERVTMDELVDSDPQTG-DLKVAILLPTAGEKLQVMLQALFGVLQLRLWSSSRARCDTLR 113          
BLAST of Ec-00_002910.1 vs. uniprot
Match: A0A835Z7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.350e-10
Identity = 44/150 (29.33%), Postives = 67/150 (44.67%), Query Frame = 0
Query:   39 LFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDD--------------------------QVGYNARVCILLPTAGENLEVVFKALVGALSQRLWD 162
            L P+A L+R +   N  LG  YL WR T + P   G     ++     +++   E  L +++W+    RL P  R  + +DD+    +                           +   ARV ILLPTAGE L V+ +AL+G  SQ+LW+
Sbjct:  199 LHPTAGLIRAVFACNLVLGARYLLWRCTKSLPLEDGSPAATAYA----YIYLLCEAILVMSIWMSHCTRLLPAVRPIIRVDDLIEASNALDTLQMANAADAGSRAPSEQQPGLISIAEEARVAILLPTAGEGLPVLLRALLGCFSQKLWE 344          
The following BLAST results are available for this feature:
BLAST of Ec-00_002910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FSC3_ECTSI2.670e-113100.00Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
D7FN39_ECTSI7.200e-94100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CP13_9STRA2.820e-2840.33Glyco_trans_2-like domain-containing protein n=1 T... [more]
D7FSC4_ECTSI8.160e-2747.52Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
A0A835ZCE1_9STRA2.120e-2639.41Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835YVP7_9STRA1.240e-1840.74Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835YSM9_9STRA4.300e-1833.14Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835YIK8_9STRA6.950e-1345.45Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835Z7S9_9STRA3.350e-1029.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 45..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3066403..3068235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002910.1Ec-00_002910.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3066402..3068511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_002910.1 ID=Ec-00_002910.1|Name=Ec-00_002910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=172bp
MTGSRMGSFKRASGMEDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLA
VANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAV
WVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFK
ALVGALSQRLWDSGLPGSQTLR
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