Ec-00_002760.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_002760.1
Unique NameEc-00_002760.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length117
Homology
BLAST of Ec-00_002760.1 vs. uniprot
Match: D7FM93_ECTSI (Copper/zinc superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM93_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 8.550e-78
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 MGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
            MGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK
Sbjct:    1 MGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116          
BLAST of Ec-00_002760.1 vs. uniprot
Match: D7FW94_ECTSI (Disproportionate superoxide radical into hydrogen peroxide n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW94_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 2.960e-73
Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
            GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHEL  TTGNAGARV GGVVGIAASK
Sbjct:   42 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELFFTTGNAGARVWGGVVGIAASK 156          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A835Z8H2_9STRA (Disproportionate superoxide radical into hydrogen peroxide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 5.410e-62
Identity = 90/115 (78.26%), Postives = 105/115 (91.30%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
            GRHG+ VH+FGDFSEGL SAGGIFNPF KNHGAPDDE+RMVGDLGN++AD+ GVCK+ +ED +V+LIGPHS+IGRSII+ A EDDLGRGGHELSL+TGN+GARV GGV+GIA SK
Sbjct:   41 GRHGLHVHIFGDFSEGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNVEADEEGVCKIAIEDSLVKLIGPHSVIGRSIIVKANEDDLGRGGHELSLSTGNSGARVAGGVIGIAPSK 155          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A2Z5VKR9_CHAMQ (Cu Zn superoxide dismutase n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=A0A2Z5VKR9_CHAMQ)

HSP 1 Score: 194 bits (493), Expect = 1.090e-61
Identity = 91/115 (79.13%), Postives = 105/115 (91.30%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
            G+HGI +HVFGDFS+GL SAGGIFNPF KNHGAPDDE+RMVGDLGNI+ D+ G  ++H+EDR+V+LIGPHSIIGRSIIIT+GEDDLGRGGHELSLT GN+G RV GGVVGIA+SK
Sbjct:   41 GKHGIHIHVFGDFSQGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDEEGQAQIHIEDRLVKLIGPHSIIGRSIIITSGEDDLGRGGHELSLTNGNSGPRVAGGVVGIASSK 155          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A7S2UTD5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.720e-58
Identity = 86/115 (74.78%), Postives = 101/115 (87.83%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
            GRHG  VHVFGDFS+G +SAGGIFNPF KNHGAPDDE+RM GDLGNI+ +D GV  V +EDR+++LIGPHS+IGR I+IT+GEDDLGRGGHELSLT GN+G RV GGV+GIA+SK
Sbjct:   41 GRHGFHVHVFGDFSQGFISAGGIFNPFGKNHGAPDDEERMAGDLGNIEVNDEGVAMVRMEDRVLKLIGPHSVIGRCIVITSGEDDLGRGGHELSLTNGNSGPRVAGGVIGIASSK 155          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A7S3JNV1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNV1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.320e-57
Identity = 89/114 (78.07%), Postives = 99/114 (86.84%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 115
            G HGI VH+FGDFS+GL SAGGIFNPF+KNHGAPD +DRMVGDLGNI+  + G C +H+ED +V+LIGPHSIIGRSIII AGEDDLGRGGHELSLTTGN G RV GGVVGIA S
Sbjct:   40 GLHGIHVHIFGDFSQGLTSAGGIFNPFAKNHGAPDADDRMVGDLGNIEVAEDGSCTIHIEDSLVKLIGPHSIIGRSIIIFAGEDDLGRGGHELSLTTGNPGPRVAGGVVGIAPS 153          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A812WGV9_SYMMI (Sod1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGV9_SYMMI)

HSP 1 Score: 179 bits (453), Expect = 3.630e-56
Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 115
            G+HG+ VHVFGDFSEG VS GGIFNPF +NHGAPDDE+RMVGDLGNI+ADD G+  V +EDR V+LIGPHSIIGRSII+ +  DDLGRGG+E SL+TGN G+R+ GGVVGIA+S
Sbjct:    1 GKHGMHVHVFGDFSEGFVSGGGIFNPFGRNHGAPDDEERMVGDLGNIEADDDGIANVAIEDRQVKLIGPHSIIGRSIIVKSNHDDLGRGGNEFSLSTGNCGSRIAGGVVGIASS 114          
BLAST of Ec-00_002760.1 vs. uniprot
Match: F0YCQ3_AURAN (Sod_Cu domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCQ3_AURAN)

HSP 1 Score: 177 bits (449), Expect = 3.610e-55
Identity = 83/114 (72.81%), Postives = 97/114 (85.09%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 115
            G+HGI VH+FGDFS+GL SAGGIFNPF KNHGAPD ++RM GDLGN++  + G C V++ED +V+LIGPHSIIGRSI++  GEDDLGRGGHELSLTTGN G RV GGVVGIA S
Sbjct:   29 GQHGIHVHIFGDFSQGLTSAGGIFNPFGKNHGAPDADERMTGDLGNLEVKEDGSCAVYIEDHLVKLIGPHSIIGRSIVVFGGEDDLGRGGHELSLTTGNPGPRVAGGVVGIAPS 142          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A7S2WW13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW13_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.480e-55
Identity = 82/114 (71.93%), Postives = 97/114 (85.09%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 115
            G H I +H FGDF++GL SAGGIFNPF KNHGAPDDE+RMVGDLGNI+ D AG C VH+EDR+V+LIGPHS+IGRS++I  GEDDLGRG H+LSL  GN+G R+ GGVVGIA+S
Sbjct:   63 GTHAIHIHTFGDFAQGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDAAGRCTVHIEDRLVKLIGPHSVIGRSVLIKQGEDDLGRGQHDLSLVNGNSGQRIAGGVVGIASS 176          
BLAST of Ec-00_002760.1 vs. uniprot
Match: A0A7S2HLY5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLY5_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.860e-54
Identity = 83/114 (72.81%), Postives = 95/114 (83.33%), Query Frame = 0
Query:    2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 115
            G HG+ +H FGDFS+GLVSAGGIFNPF KNHGAPDDE+RMVGDLGNI+ D  G C V LEDR+V+LIGPHS+IGRSII+  GEDD GRGGHELSL +GN+G R+ GG VGI  S
Sbjct:   28 GLHGLHMHTFGDFSQGLVSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDAQGKCTVMLEDRLVKLIGPHSVIGRSIIVKQGEDDFGRGGHELSLVSGNSGQRLAGGFVGICQS 141          
The following BLAST results are available for this feature:
BLAST of Ec-00_002760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM93_ECTSI8.550e-78100.00Copper/zinc superoxide dismutase n=1 Tax=Ectocarpu... [more]
D7FW94_ECTSI2.960e-7397.39Disproportionate superoxide radical into hydrogen ... [more]
A0A835Z8H2_9STRA5.410e-6278.26Disproportionate superoxide radical into hydrogen ... [more]
A0A2Z5VKR9_CHAMQ1.090e-6179.13Cu Zn superoxide dismutase n=1 Tax=Chattonella mar... [more]
A0A7S2UTD5_9STRA1.720e-5874.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JNV1_9STRA1.320e-5778.07Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A812WGV9_SYMMI3.630e-5673.68Sod1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
F0YCQ3_AURAN3.610e-5572.81Sod_Cu domain-containing protein n=1 Tax=Aureococc... [more]
A0A7S2WW13_9STRA7.480e-5571.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2HLY5_9STRA2.860e-5472.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001424Superoxide dismutase, copper/zinc binding domainPRINTSPR00068CUZNDISMTASEcoord: 41..50
score: 64.23
coord: 85..111
score: 65.98
coord: 5..27
score: 49.8
coord: 60..82
score: 39.62
IPR001424Superoxide dismutase, copper/zinc binding domainPFAMPF00080Sod_Cucoord: 2..110
e-value: 2.6E-31
score: 108.7
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilyGENE3D2.60.40.200coord: 1..114
e-value: 4.8E-39
score: 136.0
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilySUPERFAMILY49329Cu,Zn superoxide dismutase-likecoord: 2..113
NoneNo IPR availablePANTHERPTHR10003:SF71SUPEROXIDE DISMUTASE [CU-ZN]coord: 2..112
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperonePANTHERPTHR10003SUPEROXIDE DISMUTASE CU-ZN -RELATEDcoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2926803..2928633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002760.1Ec-00_002760.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 2926803..2928687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_002760.1 ID=Ec-00_002760.1|Name=Ec-00_002760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=117bp
MGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDA
DDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGN
AGARVCGGVVGIAASK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001424SOD_Cu_Zn_dom
IPR036423SOD-like_Cu/Zn_dom_sf
IPR024134SOD_Cu/Zn_/chaperone