Ec-00_002730.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_002730.1
Unique Name	Ec-00_002730.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	191

Homology

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BLAST of Ec-00_002730.1 vs. uniprot
Match: D7G7A9_ECTSI (Cation efflux protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A9_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 5.630e-95
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0

Query:    1 MGLHRDISRAASATAAAAGEHGHSRGAGLRQRDEEADGGDEGGRXXXXXXXXXXXXXPLFHGGHGHDDHNHGPAQDGLLNINHSAAGGAGRASSLAVGDTFSSSHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQL 190
            MGLHRDISRAASATAAAAGEHGHSRGAGLRQRDEEADGGDEGGRXXXXXXXXXXXXXPLFHGGHGHDDHNHGPAQDGLLNINHSAAGGAGRASSLAVGDTFSSSHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQL
Sbjct:    1 MGLHRDISRAASATAAAAGEHGHSRGAGLRQRDEEADGGDEGGRXXXXXXXXXXXXXPLFHGGHGHDDHNHGPAQDGLLNINHSAAGGAGRASSLAVGDTFSSSHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQL 190

The following BLAST results are available for this feature:

BLAST of Ec-00_002730.1 vs. uniprot

BLAST of Ec-00_002730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G7A9_ECTSI	5.630e-95	100.00	Cation efflux protein n=2 Tax=Ectocarpus siliculos...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 160..180
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 155..159
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..135
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 181..190
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 136..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:2910749..2911655 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_002730.1	Ec-00_002730.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 2910749..2911655 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_002730.1 ID=Ec-00_002730.1|Name=Ec-00_002730.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=191bp
MGLHRDISRAASATAAAAGEHGHSRGAGLRQRDEEADGGDEGGRYFRRLR
RRRRGGGPLFHGGHGHDDHNHGPAQDGLLNINHSAAGGAGRASSLAVGDT
FSSSHGGHSHGGGMGHSHSHAHFHVDMATLKKRPTLIRLFLASMCVLAVP
LWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQL*