Ec-00_002600.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_002600.1
Unique Name	Ec-00_002600.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	158

Homology

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BLAST of Ec-00_002600.1 vs. uniprot
Match: D7FL86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL86_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 3.850e-96
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0

Query:    1 MPSVLRETGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKARL 157
            MPSVLRETGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKARL
Sbjct:    1 MPSVLRETGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKARL 157

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BLAST of Ec-00_002600.1 vs. uniprot
Match: A0A6H5KTC9_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC9_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 2.050e-70
Identity = 114/146 (78.08%), Postives = 116/146 (79.45%), Query Frame = 0

Query:   24 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXX-------------SRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKAR 156
            +DVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLR                             SRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWF+VDECDVDGGDDMWPKCGGESLGSK R
Sbjct:  131 EDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRQDGFVFANYVVAALVRVFRLLKXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFVVDECDVDGGDDMWPKCGGESLGSKVR 276

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BLAST of Ec-00_002600.1 vs. uniprot
Match: D8LJT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT9_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.710e-67
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0

Query:   24 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK 154
            +DVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK
Sbjct:  176 EDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK 306

[Close]

BLAST of Ec-00_002600.1 vs. uniprot
Match: A0A2D4BDQ3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ3_PYTIN)

HSP 1 Score: 52.8 bits (125), Expect = 5.020e-5
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 0

Query:   24 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFIT-----TVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVD 137
            +D+L+  R  IA++YV+TWF PD++ ++P   + G  +      +V SL+    +RXXXXXXXXXXXX    +RK+  V     ++    RL +++G+++   H+L C W +V   D D
Sbjct:  165 EDMLITDRYLIAKRYVTTWFLPDLISSLPTEYIFGGVMDGSHDKSVVSLKLTRVIRXXXXXXXXXXXXLRQFARKIEDV---LEIDAVGARLSQVIGQVLLVTHILACFWHLVGYSDDD 280

The following BLAST results are available for this feature:

BLAST of Ec-00_002600.1 vs. uniprot

BLAST of Ec-00_002600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FL86_ECTSI	3.850e-96	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KTC9_9PHAE	2.050e-70	78.08	Ion_trans domain-containing protein n=1 Tax=Ectoca...	[more]
D8LJT9_ECTSI	1.710e-67	99.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A2D4BDQ3_PYTIN	5.020e-5	36.13	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.70		coord: 17..142 e-value: 5.2E-6 score: 28.2
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 24..143
None	No IPR available	PANTHER	PTHR10217:SF435	POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAG	coord: 24..143
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 77..109
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..131
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..52
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 132..157
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 33..133

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:2786749..2788079 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_002600.1	Ec-00_002600.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 2786749..2788079 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_002600.1 ID=Ec-00_002600.1|Name=Ec-00_002600.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=158bp
MPSVLRETGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGT
VPFASLIGLFITTVDSLQSVNFLRLVRVFRLLKLMRILRLSRKMAKVDFS
RRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGES
LGSKARL*