Ec-00_002410.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_002410.1
Unique Name	Ec-00_002410.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	109

Homology

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BLAST of Ec-00_002410.1 vs. uniprot
Match: D7FKT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT0_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 5.770e-70
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0

Query:    1 MADSRPASRLLHHRISIARAVPRTNAMNLLAFYQLPESRWATRKLAEPQKLESDLESAYKSKMAVWGIIFMSSALGMVLGMAMLVRWCSRRHTDRESAMVHALETSRG 108
            MADSRPASRLLHHRISIARAVPRTNAMNLLAFYQLPESRWATRKLAEPQKLESDLESAYKSKMAVWGIIFMSSALGMVLGMAMLVRWCSRRHTDRESAMVHALETSRG
Sbjct:    1 MADSRPASRLLHHRISIARAVPRTNAMNLLAFYQLPESRWATRKLAEPQKLESDLESAYKSKMAVWGIIFMSSALGMVLGMAMLVRWCSRRHTDRESAMVHALETSRG 108

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BLAST of Ec-00_002410.1 vs. uniprot
Match: D7FHM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM7_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.900e-12
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0

Query:   35 LPESRWATRKLAEPQKLESDLESAYKSKMAVWGIIFMSSALGMVLGMAMLV 85
            L  SR   R+LAE QKLES+LESAYKS MAVWG+IFM+S LGM L MAML+
Sbjct:   32 LTASRRTARQLAERQKLESELESAYKSTMAVWGVIFMASDLGMALVMAMLM 82

The following BLAST results are available for this feature:

BLAST of Ec-00_002410.1 vs. uniprot

BLAST of Ec-00_002410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FKT0_ECTSI	5.770e-70	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FHM7_ECTSI	1.900e-12	70.59	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 86..108
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 63..85
None	No IPR available	TMHMM	TMhelix		coord: 63..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:2678531..2678919 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_002410.1	Ec-00_002410.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 2678531..2678919 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_002410.1 ID=Ec-00_002410.1|Name=Ec-00_002410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=109bp
MADSRPASRLLHHRISIARAVPRTNAMNLLAFYQLPESRWATRKLAEPQK
LESDLESAYKSKMAVWGIIFMSSALGMVLGMAMLVRWCSRRHTDRESAMV
HALETSRG*