Ec-00_001560.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001560.1
Unique NameEc-00_001560.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length376
Homology
The following BLAST results are available for this feature:
BLAST of Ec-00_001560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..33
score: 0.555
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1786404..1788614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001560.1Ec-00_001560.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1786292..1789782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001560.1 ID=Ec-00_001560.1|Name=Ec-00_001560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=376bp
MQQKRCATRRIALPLAILLVLTVFLIWLEFAEGGRKQQAISRRRTKKSRA
GVGKDFSEFLLVIGAIMTCVIAPVFFFFLHSIYKDPATPELARACWNAVK
SKLLSYLGQSPAVPGSVVGTNNTLASLSTPTAARRRTLYANDSTNYVDMR
RDENGNKTSGASSASRRATTANTQLYSAGDAITERSYLAVPRPSSRDQSR
PRRYLDDDQREEPPYYGYAAADRRYRRKGEDLQRHPAPGYTAPYSSGAIL
PEQSGGGLKLEEDGFSAARGAQPTRWREYGGNGRDHTLPAKDVRFLGENE
ARSSEPRRRVEWDPYPDDDDDDVGKGLQGNPTVDDHMGRGVYKSTQSKRT
VARSKRARATRISLAGKTNGGRQSL*
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