Ec-00_001250.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001250.1
Unique NameEc-00_001250.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length102
Homology
BLAST of Ec-00_001250.1 vs. uniprot
Match: D8LE81_ECTSI (Pre-mRNA splicing factor, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE81_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 4.040e-69
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MPRPAGGSTAPSRLDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGPTSTG 101
            MPRPAGGSTAPSRLDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGPTSTG
Sbjct:    1 MPRPAGGSTAPSRLDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGPTSTG 101          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 4.250e-34
Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGPTST 100
            LDP MGDAWA +YAFELQQGT+VE+ DVL RCVAA+P+HGELW S+SKT  TE +R DKASIL+KVVAAYFS +G VVVIP GPT T
Sbjct:  382 LDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKT--TENRRLDKASILKKVVAAYFS-DGAVVVIPGGPTGT 465          
BLAST of Ec-00_001250.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 7.030e-34
Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGPTST 100
            LDP MGDAWA +YAFELQQGT+VE+ DVL RCVAA+P+HGELW S+SKT  TE +R DKASIL+KVVAAYFS +G VVVIP GPTST
Sbjct:  743 LDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKT--TENRRLDKASILKKVVAAYFS-DGAVVVIPGGPTST 826          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.050e-19
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFS 85
            LD   GDAWA  +AFELQQGT  ++ DV+ RCV A+PSHGELW S+SK   T  QR D+ ++LRKVVA YF+
Sbjct:  743 LDADNGDAWAAFFAFELQQGTAEQQADVIARCVKAEPSHGELWCSVSKK--TGNQRLDRETVLRKVVAQYFA 812          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A7S2USD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.830e-16
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAA 82
            LDP +GDAWA+ YAFELQ G   ++ ++L RCVAA+P+HGELW   SK   TE +R +  +IL+KVVAA
Sbjct:  254 LDPDLGDAWALFYAFELQHGKKEDQEELLKRCVAAEPTHGELWCGTSKK--TENRRCNTETILKKVVAA 320          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A4D9D6Q2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Q2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.000e-14
Identity = 33/68 (48.53%), Postives = 52/68 (76.47%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVA 81
            L+P +GD+WA +YAFEL+ G++ ++++VL +C+ ADP+HG +W ++SK+   E  R  K SIL+KVVA
Sbjct:  866 LNPDLGDSWAYYYAFELRHGSETDKSEVLKKCLEADPTHGGIWTAVSKS--VENWRVSKESILKKVVA 931          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A061ET01_THECC (Pre-mRNA splicing factor-related n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A061ET01_THECC)

HSP 1 Score: 72.0 bits (175), Expect = 3.830e-14
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAA 82
            L P +GD WA++Y FELQ+G++  + DV+ RCVAA+P HGE W++ISK    E       +IL+KVV A
Sbjct:   36 LAPDIGDFWALYYKFELQRGSEENQKDVMKRCVAAEPKHGEKWQAISKA--VENSHQPTEAILKKVVVA 102          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A0A0KDS6_CUCSA (Ubiquitin-like domain-containing protein n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KDS6_CUCSA)

HSP 1 Score: 75.5 bits (184), Expect = 9.500e-14
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVV 90
            L P +GD WA++Y FELQ G D  + DVL RC+AA+P HGE W++ISK    E       SIL+KVV A     G V
Sbjct:  944 LAPDVGDFWALYYKFELQHGGDENQKDVLKRCIAAEPKHGEKWQTISKA--VENSHQPTESILKKVVVALGKEEGAV 1018          
BLAST of Ec-00_001250.1 vs. uniprot
Match: F0YJY9_AURAN (PRP1_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY9_AURAN)

HSP 1 Score: 75.1 bits (183), Expect = 1.290e-13
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVA 81
            LDP +GDAWA +YAFEL  G + ++ DVL RCVAA+P+HGELW SISK       R D A+ LR   A
Sbjct:  885 LDPDLGDAWAHYYAFELADGVESDQEDVLQRCVAAEPAHGELWTSISKDPA--HARADVAAKLRLAAA 950          
BLAST of Ec-00_001250.1 vs. uniprot
Match: A0A6J5VMC1_PRUAR (Uncharacterized protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5VMC1_PRUAR)

HSP 1 Score: 74.7 bits (182), Expect = 1.570e-13
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAA 82
            L P +GD WA++Y FELQ GT+  + DVL RCVAA P HGE W+ ISK      Q  +  +IL+KVVAA
Sbjct:  364 LAPDIGDFWALYYKFELQHGTEENQKDVLNRCVAAGPKHGEKWQPISKAVENSHQPIE--AILKKVVAA 430          
The following BLAST results are available for this feature:
BLAST of Ec-00_001250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE81_ECTSI4.040e-69100.00Pre-mRNA splicing factor, putative n=1 Tax=Ectocar... [more]
A0A6H5KYH2_9PHAE4.250e-3474.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI7.030e-3475.86PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YM25_9STRA5.050e-1959.72PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2USD3_9STRA7.830e-1656.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D6Q2_9STRA2.000e-1448.53Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A061ET01_THECC3.830e-1449.28Pre-mRNA splicing factor-related n=2 Tax=Pentapeta... [more]
A0A0A0KDS6_CUCSA9.500e-1449.35Ubiquitin-like domain-containing protein n=9 Tax=C... [more]
F0YJY9_AURAN1.290e-1355.88PRP1_N domain-containing protein n=1 Tax=Aureococc... [more]
A0A6J5VMC1_PRUAR1.570e-1353.62Uncharacterized protein n=1 Tax=Prunus armeniaca T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 14..82
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 14..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1534213..1535082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001250.1Ec-00_001250.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1534213..1535082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001250.1 ID=Ec-00_001250.1|Name=Ec-00_001250.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=102bp
MPRPAGGSTAPSRLDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADP
SHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGPTST
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027108Prp6/Prp1/STA1