Ec-00_001200.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001200.2
Unique NameEc-00_001200.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1163
Homology
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BLAST of Ec-00_001200.2 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI)

HSP 1 Score: 1141 bits (2951), Expect = 0.000e+0
Identity = 905/925 (97.84%), Postives = 906/925 (97.95%), Query Frame = 0 
Query:   47 KIGLRLLRELVTLDVSYNRLKTWPPQVEECRNLRDLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAGEGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGSVAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEAGVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEGSKQAEAFDLTGDAVAAANSTNSAGEIDTLPTITEEEPPAPEAGEVVGNSSTFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIGETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVKESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVPIRDTAIRRELLRDGRSTLRTR 971
            +IGLRLLRE                 VEECRNLRDLR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAGEGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGSVAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEAGVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEGSKQAEAFDLTGDAVAAANSTNSAGEIDTLPTITEEEPPAPEAGEVVGNSSTFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIGETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVKESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVPIRDTAIRRELLRDGRSTLRTR
Sbjct:  445 EIGLRLLREXXXXXXXXXXXXXXXXXVEECRNLRDLRLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAGEGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGSVAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEAGVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEGSKQAEAFDLTGDAVAAANSTNSAGEIDTLPTITEEEPPAPEAGEVVGNSSTFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIGETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVKESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVPIRDTAIRRELLRDGRSTLRTR 1369
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BLAST of Ec-00_001200.2 vs. uniprot
Match: A0A6H5KSY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY7_9PHAE)

HSP 1 Score: 853 bits (2203), Expect = 1.810e-293
Identity = 705/869 (81.13%), Postives = 730/869 (84.00%), Query Frame = 0 
Query:  136 KTHSILPVGRKQKGPRLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQWPLLTHLVLSRNPLRGRRRQSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAGEGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGSVAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHGAALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELALVQLRKNAK--------------------------------VRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEAGVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEGSKQAEAFDLTGDAVAAANSTNSAGEI-DTLPTITEEEPPAPEAGEVVGNSSTFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIGETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVKESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVPIRDTAIRRELLRDGRSTLRTR 971
            KTHSILPVGRKQKGPRLVSLEVLRLDGNRLTE PDMVET KTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   ++ P       S +P +                H  ++  DWEEAARLLNVAAEAY+DVVHVVPDFPDVAGEGP LAKTRPHD DTFHHV+LAMAHL+GARKVAIEIDDMTGKTDGASG SVAGSLSLQSVDMTEDSSM T S+DTGEREERRQQE+ERAYLREKRN   GAAL AFSYADQLEQLSRPVGRSAGVWLGRAAV AEMG PGVALDDLELALVQLRKNAK                                VRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERK+KKAESDRKTNERLAVRQRQA        RLEESAMADV EDKE   V    SIAASKADSSSPDGTRSDQSAAG+TVVTAIPST+ AAVDS EEGSKQAEAF LTGDAVAAA+S +SAGEI DTLPTITEEEPP PEAGEVVGNSS  ED+ DKTG QGQAIDER   ER DGGRSEAEPSSENK   TTSPTQ  E+LQ S WLE A GLSSRE ELREGGSLGSAS GT P+TDGKRN+ N+VK+S AR ELSKQRADIALLVAQAKEGMAYVAQS+DMADIKRGFVFTP+GVP+RDTAIRRELLRDGRSTLRTR
Sbjct:   50 KTHSILPVGRKQKGPRLVSLEVLRLDGNRLTEGPDMVETLKTLTELDVSNNPIKNWSLDVSNLRKMKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------KRTP-------SPSPTK----------------HTKINGKDWEEAARLLNVAAEAYEDVVHVVPDFPDVAGEGPALAKTRPHDMDTFHHVNLAMAHLQGARKVAIEIDDMTGKTDGASGSSVAGSLSLQSVDMTEDSSMVTTSMDTGEREERRQQEVERAYLREKRNXXXGAALLAFSYADQLEQLSRPVGRSAGVWLGRAAVTAEMGNPGVALDDLELALVQLRKNAKGRREQRNATSVEWGLLRGVRFSYWFRTNHCRKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAEQERKEKKAESDRKTNERLAVRQRQAXXXXXXXXRLEESAMADVKEDKEXXXVVXXXSIAASKADSSSPDGTRSDQSAAGNTVVTAIPSTKTAAVDSSEEGSKQAEAFALTGDAVAAADSADSAGEIGDTLPTITEEEPPVPEAGEVVGNSSISEDDSDKTGHQGQAIDERGARERADGGRSEAEPSSENKRPITTSPTQNEESLQESLWLEAAGGLSSRENELREGGSLGSASVGTAPNTDGKRNQRNSVKDSPARAELSKQRADIALLVAQAKEGMAYVAQSIDMADIKRGFVFTPHGVPVRDTAIRRELLRDGRSTLRTR 876
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BLAST of Ec-00_001200.2 vs. uniprot
Match: D8LE77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE77_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.030e-48
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 
Query: 1016 AAMAIYGDVEEAWEREQEEKESTKRIEAAKRRVELEVLAAAEEKXXXXXXXXXXXXXXXXXXXXRVENDDAPVESAFPQAAPGAPAKSPSSSTPTTKPANDTTKGQXXXXXXXXXXXXXXXXXXPELRKVLARGAAARAKKVAGRRR 1162
            AAMAIYGDVEEAWEREQEEKESTKRIEAAKRRVELEVLAAAEEKXXXXXXXXXXXXXXXXXXXXRVENDDAPVESAFPQAAPGAPAKSPSSSTPTTKPANDTTKGQXXXXXXXXXXXXXXXXXXPELRKVLARGAAARAKKVAGRRR
Sbjct:   24 AAMAIYGDVEEAWEREQEEKESTKRIEAAKRRVELEVLAAAEEKXXXXXXXXXXXXXXXXXXXXRVENDDAPVESAFPQAAPGAPAKSPSSSTPTTKPANDTTKGQXXXXXXXXXXXXXXXXXXPELRKVLARGAAARAKKVAGRRR 170
The following BLAST results are available for this feature:
BLAST of Ec-00_001200.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE76_ECTSI0.000e+097.84Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KSY7_9PHAE1.810e-29381.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE77_ECTSI1.030e-48100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 646..666
NoneNo IPR availableCOILSCoilCoilcoord: 1115..1138
NoneNo IPR availableCOILSCoilCoilcoord: 668..688
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 53..72
e-value: 510.0
score: 0.7
coord: 76..95
e-value: 300.0
score: 2.4
coord: 269..287
e-value: 610.0
score: 0.1
coord: 99..118
e-value: 97.0
score: 6.2
coord: 152..171
e-value: 39.0
score: 9.2
coord: 336..355
e-value: 12.0
score: 13.1
NoneNo IPR availablePANTHERPTHR16083:SF20LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40coord: 176..377
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 53..188
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 176..377
NoneNo IPR availablePANTHERPTHR16083:SF20LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40coord: 53..188
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 30..190
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 152..405
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 53..76
e-value: 0.32
score: 20.1
coord: 313..335
e-value: 7.8
score: 14.1
coord: 244..266
e-value: 87.0
score: 5.6
coord: 100..122
e-value: 67.0
score: 6.5
coord: 152..175
e-value: 15.0
score: 11.8
coord: 267..290
e-value: 10.0
score: 13.2
coord: 221..243
e-value: 50.0
score: 7.6
coord: 77..99
e-value: 25.0
score: 10.0
coord: 336..359
e-value: 0.011
score: 25.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 40..146
e-value: 2.4E-21
score: 77.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 147..416
e-value: 2.3E-56
score: 192.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 77..135
e-value: 4.3E-8
score: 32.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 269..291
score: 6.033
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 78..99
score: 6.896
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 154..175
score: 5.987
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 292..313
score: 5.433
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 101..122
score: 6.78
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 177..199
score: 6.803
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 338..360
score: 7.104
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 55..76
score: 6.341
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 223..244
score: 6.565
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 315..337
score: 5.155
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 246..267
score: 6.518
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 124..145
score: 5.44
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 506..675
e-value: 4.4E-8
score: 34.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 410..636

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1500479..1511738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001200.2Ec-00_001200.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1495708..1512407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001200.2 ID=Ec-00_001200.2|Name=Ec-00_001200.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1163bp
MTGRTTQTYDIPVARESFVFSTSVSVTGWFFCSVCTSPYTVQLLSCKIGL
RLLRELVTLDVSYNRLKTWPPQVEECRNLRDLRLDHNKLQEVPAIVGDNT
ALTNLNLSGNSLKGLPHTINSLSALARLDLSDNKLKTHSILPVGRKQKGP
RLVSLEVLRLDGNRLTERPDMVETFKTLTELDVSNNPIKNWSLDVSNLRK
MKHLRLRGVGLDRCPEGIGHLNKLESLDFSENHIDTLDQSMAALFKLKKL
GLRGNNIRDLGSCVGSMISLTSLDAGGNNLELISPELSRCTALETLDVSG
GTINQLPDGLSMLTRLRVLRAQDNGLRAIPPDFQTLTALEELRLGGNQLS
SLPASLITLTKMRYAELSRNSMESPPPVTRQWPLLTHLVLSRNPLRGRRR
QSLRLLQAAQRGHDAMHRGDWEEAARLLNVAAEAYKDVVHVVPDFPDVAG
EGPPLAKTRPHDTDTFHHVSLAMAHLRGARKVAIEIDDMTGKTDGASGGS
VAGSLSLQSVDMTEDSSMATRSIDTGEREERRQQELERAYLREKRNHHHG
AALSAFSYADQLEQLSRPVGRSAGVWLGRAAVAAEMGKPGVALDDLELAL
VQLRKNAKVRFLLAKSRIELGQYQRGLTDCEVASRLLDFEERLLGEREAE
QERKDKKAESDRKTNERLAVRQRQAAEADAEAKRLEESAMADVNEDKEEA
GVEGKSSIAASKADSSSPDGTRSDQSAAGDTVVTAIPSTEAAAVDSPEEG
SKQAEAFDLTGDAVAAANSTNSAGEIDTLPTITEEEPPAPEAGEVVGNSS
TFEDELDKTGDQGQAIDERSDGERRDGGRSEAEPSSENKDHSTTSPTQIG
ETLQGSPWLEEAAGLSSREKELREGGSLGSASAGTPPDTDGKRNRSNTVK
ESSARVELSKQRADIALLVAQAKEGMAYVAQSVDMADIKRGFVFTPYGVP
IRDTAIRRELLRDGRSTLRTRHRRLLAVEAAKKRERARDAGLMRRAFRQA
DARQKAGRAAKARKAAAMAIYGDVEEAWEREQEEKESTKRIEAAKRRVEL
EVLAAAEEKAQDEAAQTAIDKGQDGGVETRVENDDAPVESAFPQAAPGAP
AKSPSSSTPTTKPANDTTKGQRQQKQQQEEDEEDEEEDDPELRKVLARGA
AARAKKVAGRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR011990TPR-like_helical_dom_sf