Ec-00_000680.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_000680.1
Unique Name	Ec-00_000680.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	322

Homology

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BLAST of Ec-00_000680.1 vs. uniprot
Match: D7FI17_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI17_ECTSI)

HSP 1 Score: 633 bits (1632), Expect = 4.200e-229
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0

Query:    1 MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLPPAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQRSFILRCVGATWSCWAGGKCWVSMLLIACVVGWLRGLCQWRVGLFATPQNRYNCTTN 321
            MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLPPAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQRSFILRCVGATWSCWAGGKCWVSMLLIACVVGWLRGLCQWRVGLFATPQNRYNCTTN
Sbjct:    1 MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLPPAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQQGRGTDVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQRSFILRCVGATWSCWAGGKCWVSMLLIACVVGWLRGLCQWRVGLFATPQNRYNCTTN 321

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BLAST of Ec-00_000680.1 vs. uniprot
Match: A0A6H5KFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 2.360e-142
Identity = 241/301 (80.07%), Postives = 248/301 (82.39%), Query Frame = 0

Query:    1 MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLPPAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIAAAHVLAGAGAATTGGRLQQQ-------QGRGTDVFDVWAGSSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ--RSFILRCVGATWSCW-AGGKCWVSMLLI 291
            MCARIA QQRQRASAARRLRQAEDERRLE LVAGRTAMMIRPLDLS NNHLQQLRASVDASWSSFSTAWDARRARGSGSGST+GGG           PLPPAAGFVMPPCTHRGAPPA GSGRGR HTAVE+GERT AAEAECPECAAIAAAHVLAGAGA                 QGRGTDV DVWAGSSLGVLNADAL R+LTFL+PRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQ  R F      ATW  W A G+ + S  L+
Sbjct:  154 MCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSANNHLQQLRASVDASWSSFSTAWDARRARGSGSGSTDGGG-----------PLPPAAGFVMPPCTHRGAPPA-GSGRGRGHTAVEQGERTLAAEAECPECAAIAAAHVLAGAGAXXXXXXXXXXXXXXXXXQGRGTDVVDVWAGSSLGVLNADALQRALTFLEPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQGWREFFFE-FEATWLEWLAAGQNFESSCLV 441

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BLAST of Ec-00_000680.1 vs. uniprot
Match: A0A835Z6K8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.360e-11
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 0

Query:  184 SSLGVLNADALHRSLTFLQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRWHLHDWNPKSSAVTQR-SFILRCVGATWSCWA 280
            S L +L  D   R L  LQP DL ELAQAS+G + AAD++ +W  +W  RFG +W S+  + AA RWH H W+P   A  Q           +W  WA
Sbjct:   98 SFLPLLPDDLRLRCLALLQPEDLFELAQASKGCQAAADAEPLWAGLWQYRFGRVWASQPLQDAAERWHCH-WDPLRHAPLQGWKLFFSQFALSWIGWA 194

The following BLAST results are available for this feature:

BLAST of Ec-00_000680.1 vs. uniprot

BLAST of Ec-00_000680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FI17_ECTSI	4.200e-229	100.00	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KFP0_9PHAE	2.360e-142	80.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z6K8_9STRA	2.360e-11	41.84	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 183..229 score: 8.703
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 177..240

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:914937..915975 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_000680.1	Ec-00_000680.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 914937..915975 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_000680.1 ID=Ec-00_000680.1|Name=Ec-00_000680.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=322bp
MCARIAEQQRQRASAARRLRQAEDERRLERLVAGRTAMMIRPLDLSVNNH
LQQLRASVDASWSSFSTAWDARRARGSGSGSTEGGGLHSDAKATAAPPLP
PAAGFVMPPCTHRGAPPAAGSGRGRRHTAVEEGERTAAAEAECPECAAIA
AAHVLAGAGAATTGGRLQQQQGRGTDVFDVWAGSSLGVLNADALHRSLTF
LQPRDLLELAQASRGAREAADSQLVWREVWWARFGAIWESEICKKAARRW
HLHDWNPKSSAVTQRSFILRCVGATWSCWAGGKCWVSMLLIACVVGWLRG
LCQWRVGLFATPQNRYNCTTN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR036047	F-box-like_dom_sf