Ec-00_000390.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_000390.1
Unique NameEc-00_000390.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length286
Homology
[Close]
BLAST of Ec-00_000390.1 vs. uniprot
Match: D7FHP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP0_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 2.040e-170
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0 
Query:    1 MELSTFGDATVDDMLKLVQDREALFENMMSGPGIPATKFPRRGKPRSVVLTLVRPGGXXXXXXXXXXXXXXXXXXXXXXGVTSFSSTASPSMFGGSEEVSPASSFSSSVGRGRQRGITSSFGRTRFPAERDLFSKPSYKRSFRSQPHQHXXXXXXQGPTSLKGVLDLELEWNRQRGRKGSLRLGEVIEAIAGIDSQILRPVCEELRRRAASVGESRVGEGGEREEEEDTFVSLRTNRRTLDLKFSTVPIRNRFMLAFKTLAWETAAARAGSTSGRGSRPVGSSHF 285
            MELSTFGDATVDDMLKLVQDREALFENMMSGPGIPATKFPRRGKPRSVVLTLVRPGGXXXXXXXXXXXXXXXXXXXXXXGVTSFSSTASPSMFGGSEEVSPASSFSSSVGRGRQRGITSSFGRTRFPAERDLFSKPSYKRSFRSQPHQHXXXXXXQGPTSLKGVLDLELEWNRQRGRKGSLRLGEVIEAIAGIDSQILRPVCEELRRRAASVGESRVGEGGEREEEEDTFVSLRTNRRTLDLKFSTVPIRNRFMLAFKTLAWETAAARAGSTSGRGSRPVGSSHF
Sbjct:    1 MELSTFGDATVDDMLKLVQDREALFENMMSGPGIPATKFPRRGKPRSVVLTLVRPGGXXXXXXXXXXXXXXXXXXXXXXGVTSFSSTASPSMFGGSEEVSPASSFSSSVGRGRQRGITSSFGRTRFPAERDLFSKPSYKRSFRSQPHQHXXXXXXQGPTSLKGVLDLELEWNRQRGRKGSLRLGEVIEAIAGIDSQILRPVCEELRRRAASVGESRVGEGGEREEEEDTFVSLRTNRRTLDLKFSTVPIRNRFMLAFKTLAWETAAARAGSTSGRGSRPVGSSHF 285
[Close]
BLAST of Ec-00_000390.1 vs. uniprot
Match: A0A6H5KDH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH9_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 3.120e-45
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0 
Query:  196 QILRPVCEELRRRAASVGESRVGEGGEREEEEDTFVSLRTNRRTLDLKFSTVPIRNRFMLAFKTLAWETAAARAGSTSGRGSRPVGSSHF 285
            QILRPVCEELRRRAASVGESR GEGG  EEE DTFVSLRTNRRTLDLKFSTVPIRNRFMLAFKTLAWETAAA AGST GRGSRPVGSSHF
Sbjct:    4 QILRPVCEELRRRAASVGESRAGEGGAGEEE-DTFVSLRTNRRTLDLKFSTVPIRNRFMLAFKTLAWETAAAEAGSTRGRGSRPVGSSHF 92
The following BLAST results are available for this feature:
BLAST of Ec-00_000390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHP0_ECTSI2.040e-170100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDH9_9PHAE3.120e-4593.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:605794..610110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000390.1Ec-00_000390.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 605760..610110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_000390.1 ID=Ec-00_000390.1|Name=Ec-00_000390.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=286bp
MELSTFGDATVDDMLKLVQDREALFENMMSGPGIPATKFPRRGKPRSVVL
TLVRPGGSSSSGGGGGGGGGGGGTGGGVGGVTSFSSTASPSMFGGSEEVS
PASSFSSSVGRGRQRGITSSFGRTRFPAERDLFSKPSYKRSFRSQPHQHQ
QHQHQQGPTSLKGVLDLELEWNRQRGRKGSLRLGEVIEAIAGIDSQILRP
VCEELRRRAASVGESRVGEGGEREEEEDTFVSLRTNRRTLDLKFSTVPIR
NRFMLAFKTLAWETAAARAGSTSGRGSRPVGSSHF*
back to top