Ec-28_003500.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_003500.1
Unique Name	Ec-28_003500.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	438

Homology

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BLAST of Ec-28_003500.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 758 bits (1956), Expect = 1.440e-274
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 1

Query:    1 MVQSYEANVQYSAALKLSLLCLGGAAAFMTPPSLVTHPREMRSXXXXXXXXXXXVVPRERRFVFNMANDEARESAVAASGAEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEKXXXXXSDE 1311
            MVQSYEANVQYSAALKLSLLCLGGAAAFMTPPSLVTHPREMRSXXXXXXXXXXXVVPRERRFVFNMANDEARESAVAASGAEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEKXXXXXSDE
Sbjct:    1 MVQSYEANVQYSAALKLSLLCLGGAAAFMTPPSLVTHPREMRSXXXXXXXXXXXVVPRERRFVFNMANDEARESAVAASGAEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEKXXXXXSDE 437

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BLAST of Ec-28_003500.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 288 bits (738), Expect = 3.180e-90
Identity = 166/349 (47.56%), Postives = 233/349 (66.76%), Query Frame = 1

Query:  235 SGAEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPED-FNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDD 1278
            S  E A EKAA+LR  AA  R QA ELE KR  E+Q  A+ +F+SFD+N DG VD+ EL AGLEG LR+ F+K++T  M RKP   E+D RI+ +PGGSL P +LA+KLI++YD NGDG+LQ SEFA   ++R RL+++F D+ + AR      R+R++E++    A +     G  +P    NDGP T  DK LS LPY LPL+D + F  H+F  FP Q ++ +PL A+LL  RSLPF+ L+ FF L   +  P+VNKLVRFN++QA+ LDIA+  P +   + +  LG+D+ KL PLA   +DV+FV ++A V YS+ +S+ G  P  LP+LG++NRE+   +E++
Sbjct:   67 SEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDK---LAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEEE 412

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BLAST of Ec-28_003500.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 6.350e-90
Identity = 167/338 (49.41%), Postives = 231/338 (68.34%), Query Frame = 1

Query:  244 EEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 1257
            E A ++AAKLR  AA  R +A ELE K+  E+++ AQ +F++FD+N DG+VDV EL AGLEG LR+ F K +   M RKPS  EVD+RI+ +PGG+L P +LA KLI++YD NGDG+LQ SEFA   ++R RL++LF+ + +E R+    AR         D+ R +A    +  P D NDGP T  DK LS LPY LPL D +VF AH+F  FP Q ++ +PL A+LL  RS+PF+ LI FF L  +++ P++NKLVRFN++QA+ LDIA+  P +   I  +VLG D++KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:   72 EVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERV----ARMEXXXXXXXDRMRPDA-GTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNREN 404

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BLAST of Ec-28_003500.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 2.390e-76
Identity = 152/320 (47.50%), Postives = 210/320 (65.62%), Query Frame = 1

Query:  250 AAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIG 1209
            A +KAAKLR  AA  R +          E+++ A  +F++FD+N DG+VD+ EL AGLE  LR+ F K +   M RKPS  EVDERI+ +PGG+L P ELA KLI++YD NGDG+LQ SEFA   ++R RL++L + + ++ RL     R+R+++    DK R +  A  +  P D NDGP T  DK LS LPY LPL+D ++F AH+F  FP Q ++ +PL A+LL  RSLPF+ LI FF L   ++ P VNKLVRFN++QA+ LDIA+  P +   I   +LG D+ KLAPL+   +DV+FV ++A V YS+ +SA G
Sbjct:   74 AEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMD----DKMRPDTGA-VVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388

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BLAST of Ec-28_003500.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 6.900e-70
Identity = 136/308 (44.16%), Postives = 196/308 (63.64%), Query Frame = 1

Query:  349 AQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQ-EAKARGLA------LPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNR 1251
            A  +F +FD+N DG V V EL AGLEG L+K F K++T  M RKP+P EV+ +I E+PG +L P +LA++LI+ YD NGDGVLQ SEFA   ++R RL+S+F +R           RE E+E R A++ R+ +AK  G           D      T  +K L  LPY LPL D +V+  HI+ TFP Q+++ EPLVAIL+   +LPF+ L+ FFG+   ++   +NKL+RFN+ QA+  DIA+  PS+F  ++T  LG D+ K++P+  +  D++ V++V  V YSIA+SA G +P  +P  GK+NR
Sbjct:  102 ADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRER-----------REEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398

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BLAST of Ec-28_003500.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 4.080e-67
Identity = 136/277 (49.10%), Postives = 186/277 (67.15%), Query Frame = 1

Query:  244 EEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSI 1074
            E A ++AAKLR  AA  R +A ELE K+  E+++ AQ +F++FD+N DG+VDV EL AGLEG LR+ F K +   M RKPS  EVD+RI+ +PGG+L P +LA KLI++YD NGDG+LQ SEFA   ++R RL++LF+ + +E R+    AR         D+ R +A    +  P D NDGP T  DK LS LPY LPL D +VF AH+F  F  Q ++ +PL A+LL  RS+PF+ LI FF L   ++ P++NKLVRFN++QA+ LDIA+  P +
Sbjct:   72 EVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERV----ARMEXXXXXXXDRMRPDA-GTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGV 343

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BLAST of Ec-28_003500.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 2.660e-55
Identity = 111/233 (47.64%), Postives = 155/233 (66.52%), Query Frame = 1

Query:  559 LIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 1257
            L+ SYD NGDG+LQ SEFA   ++R RL++LF+ + +E R+    AR          K R +A A  ++ P D NDGP T  DK LS LPY LPL D +VF AH+F  FP Q ++ +PL A+LL  RS+PF+ L+ FF L   ++ P++NKLVRFN++QA+ LDIA+  P +   I  +VLG D++KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:   40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERV----ARMEXXXXXXXXKMRPDAGAVEVS-PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNREN 267

[Close]

BLAST of Ec-28_003500.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.390e-53
Identity = 127/310 (40.97%), Postives = 180/310 (58.06%), Query Frame = 1

Query:  361 FDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAK-PEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEK 1287
            F++FD+N DG+VD+ EL AGLE  LR+   K +   M RKPS  EVDERI+ +PGG+L P ELA KLI++YD NGDG+LQ SEFA   ++R RL+ LF+ + ++ R+    AR  E + R  DK R +  A               +T                               ++ +PL A+LL  RS+PF+ LI FF L     + P+VNKLVRFN +QA+ +DIA+  P +   I  +VLG D+ KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+   +++ GE+
Sbjct:   47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERV----ARMEERQRRMDDKMRPDTGA--------------VVT-------------------------------AWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQEGGEE 307

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BLAST of Ec-28_003500.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 1.950e-45
Identity = 92/177 (51.98%), Postives = 124/177 (70.06%), Query Frame = 1

Query:  727 DKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 1257
            DK R +A A  ++ P D NDGP T  DK LS LPY LPL D +VF AH+F  FP Q ++ EPLVA+LL  RS+PF+ LI FF L   ++ P++NKLVRFN++QA+ LDIA+  P +   I  +VLG D++KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:   10 DKMRPDAGAVEVS-PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNREN 185

[Close]

BLAST of Ec-28_003500.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 6.530e-42
Identity = 101/253 (39.92%), Postives = 142/253 (56.13%), Query Frame = 1

Query:  499 DERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 1257
            DERI+ +PGG+L P ELA KLI++YD NG+G+LQ SEFA   ++R RL++LF+ + +E RL     R+R+++    D  R +A A  +  P D NDG     D  LS LPY LPL D +VF AH+F  FP Q ++ +PL A                                      A+ +DIA+  P +   I  +VLG D+ KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMD----DNMRPDAGA-VVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNREN 230

The following BLAST results are available for this feature:

BLAST of Ec-28_003500.1 vs. uniprot

BLAST of Ec-28_003500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTM8_ECTSI	1.440e-274	100.00	TIC 20 related, plastid import n=2 Tax=Ectocarpus ...	[more]
A0A2I6U1M4_SACJA	3.180e-90	47.56	Tic20-like protein n=15 Tax=Saccharina japonica Ta...	[more]
D8LS19_ECTSI	6.350e-90	49.41	EF-hand domain-containing protein n=7 Tax=Ectocarp...	[more]
D7FRG5_ECTSI	2.390e-76	47.50	EF-hand domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A6H5JY95_9PHAE	6.900e-70	44.16	EF-hand domain-containing protein n=2 Tax=Ectocarp...	[more]
D8LS20_ECTSI	4.080e-67	49.10	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5KUU9_9PHAE	2.660e-55	47.64	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JBJ0_9PHAE	1.390e-53	40.97	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5KVD7_9PHAE	1.950e-45	51.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCI4_9PHAE	6.530e-42	39.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:3324425..3328918 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	767.3
Seed ortholog evalue	3.8e-219
Seed eggNOG ortholog	2880.D8LTM8
Length	1314
Hectar predicted targeting category	chloroplast
Gene id	Ec-28_003500.1
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.	protein transport
EggNOG OGs	2BYWW@1,2QUSD@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_003500	Ec-28_003500	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 3324425..3328918 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_003500.1	Ec-28_003500.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 3324425..3328918 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_003500.1.7	Ec-28_003500.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3324425..3324736 -
Ec-28_003500.1.6	Ec-28_003500.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3325293..3325400 -
Ec-28_003500.1.5	Ec-28_003500.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3325837..3326061 -
Ec-28_003500.1.4	Ec-28_003500.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3326554..3326676 -
Ec-28_003500.1.3	Ec-28_003500.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3327163..3327320 -
Ec-28_003500.1.2	Ec-28_003500.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3327639..3327723 -
Ec-28_003500.1.1	Ec-28_003500.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 3328616..3328918 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_003500.1	CDS:Ec-28_003500.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 3324425..3324736 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:3324425..3328918-
coding sequence from alignment at chr_28:3324425..3328918-

mRNA sequence

>Ec-28_003500.1 ID=Ec-28_003500.1|Name=Ec-28_003500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=438bp
MVQSYEANVQYSAALKLSLLCLGGAAAFMTPPSLVTHPREMRSSSSASRR
AAAAVVPRERRFVFNMANDEARESAVAASGAEEAAEKAAKLRAFAAELRL
QAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFI
KRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQ
PSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAK
ARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLS
FLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILD
IAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASS
AIGVLPESLPILGKMNRESTRAKEDDGEKDDGEKSDE*

spliced messenger RNA

>Ec-28_003500.1 ID=Ec-28_003500.1|Name=Ec-28_003500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1314bp|location=Sequence derived from alignment at chr_28:3324425..3328918- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTCAGAGCTATGAAGCGAATGTCCAATATTCGGCTGCTCTGAAGCT
GTCGCTCCTCTGCCTCGGAGGTGCGGCTGCGTTCATGACGCCGCCTTCGC
TGGTGACACATCCCCGAGAAATGCGCAGCAGCAGCAGTGCATCGCGTCGA
GCAGCCGCAGCTGTTGTGCCACGCGAACGCCGGTTCGTCTTCAACATGGC
GAATGACGAGGCGAGGGAGTCTGCCGTAGCGGCAAGCGGCGCTGAAGAGG
CTGCGGAAAAAGCAGCGAAGTTGAGGGCCTTTGCTGCGGAGCTCCGGTTG
CAGGCGGAGGAGTTGGAGTCAAAGAGGGACTCGGAGAAGCAGCAGGCGGC
GCAGGAGGCGTTCGATTCTTTCGACACGAACGATGACGGGACGGTGGACG
TGAAGGAGTTGATCGCAGGGTTGGAGGGGCAGCTCAGGAAGGACTTCATC
AAGCGCATGACCAAGACGATGAAGAGGAAGCCTTCCCCGGCTGAGGTCGA
CGAACGGATTTCGGAAATGCCCGGTGGTAGTCTGCTCCCGATGGAGCTGG
CGCAAAAGCTGATCGAGAGTTACGACACCAACGGAGACGGAGTCCTCCAG
CCGTCAGAGTTTGCCTCCAAGGCGGATATGCGGGTCAGGCTAGACAGCCT
TTTTGCCGACCGTGCACAGGAGGCTCGGTTGGAAGCGGCCGCCGCAAGAG
AGAGGGAAATCGAGAACAGGGGGGCAGACAAAGCGCGGCAGGAAGCCAAG
GCCAGGGGGCTAGCCCTACCAGAGGACTTCAACGACGGCCCCCCCACCAT
CACAGACAAGCTACTGTCGGTCCTGCCGTACACTCTGCCTCTGATGGACA
GCCTCGTCTTCGGAGCCCACATCTTCCAGACATTCCCTACCCAGTTGAGC
TTCTTGGAGCCTCTGGTGGCGATTCTGCTTATCTACCGGTCTCTTCCGTT
TAGCGGACTGATCCTGTTCTTCGGCCTGCAGTGGTTTGCTGCGAAGCCGG
AGGTGAACAAGCTGGTGCGGTTCAACCTCCGGCAAGCGGTCATCCTCGAC
ATCGCCATGTTCTTCCCGTCCATATTCGCCTTCATCATCACGTCCGTCCT
GGGCGAGGACTCGGCGAAACTCGCCCCCCTCGCGACCGTCTGCAACGACG
TCATCTTCGTGACGGTGGTGGCCTGCGTGCTGTACTCGATAGCTTCGTCC
GCCATCGGGGTATTGCCGGAGTCGTTGCCCATTCTCGGGAAGATGAACAG
GGAGAGCACTCGCGCCAAGGAGGACGATGGCGAGAAGGACGACGGCGAGA
AAAGCGACGAGTAG

protein sequence of Ec-28_003500.1

>Ec-28_003500.1 ID=Ec-28_003500.1|Name=Ec-28_003500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=438bp
MVQSYEANVQYSAALKLSLLCLGGAAAFMTPPSLVTHPREMRSSSSASRR
AAAAVVPRERRFVFNMANDEARESAVAASGAEEAAEKAAKLRAFAAELRL
QAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFI
KRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQ
PSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAK
ARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLS
FLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILD
IAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASS
AIGVLPESLPILGKMNRESTRAKEDDGEKDDGEKSDE*

mRNA from alignment at chr_28:3324425..3328918-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_003500.1 ID=Ec-28_003500.1|Name=Ec-28_003500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4494bp|location=Sequence derived from alignment at chr_28:3324425..3328918- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTTCAGAGCTATGAAGCGAATGTCCAATATTCGGCTGCTCTGAAGCT
GTCGCTCCTCTGCCTCGGAGGTGCGGCTGCGTTCATGACGCCGCCTTCGC
TGGTGACACATCCCCGAGAAATGCGCAGCAGCAGCAGTGCATCGCGTCGA
GCAGCCGCAGCTGTTGTGCCACGCGAACGCCGGTTCGTCTTCAACATGGC
GAATGACGAGGCGAGGGAGTCTGCCGTAGCGGCAAGCGGCGCTGAAGAGG
CTGCGGAAAAAGCAGCGAAGTTGAGGGCCTTTGCTGCGGAGCTCCGGTTG
CAGGTGTGTTTGTCTCGATCCCAAACATGACTGCATAGCCTATTGTACAC
GCGGCCTTTTGCACAGCAAGTAGGAAACCCCGCCGTGGTGCCCAGCGGTA
CAGAAATACTAAACCTGTAGACAAGAGTAGACAAGAGCCTTGAGGCGTTA
ATAGAGCTAGACAGAACCGCGCAATATGGCTGGGGTGTTTATGCCGCAAC
CTGCGAGGTACATGTACACACTAGTTGTGGATTGATGCCACTTCCTCGCC
AAATTGCCTTCATGAAAGACAAAAGAAGAAATGGAGTTGAGTTTGTAGCG
TGAAAGGTTGCAAGTTTAGGTGTGTACCGGCTCAAATGCTCGCAGTCTAC
AAGTAAGGGCTCAAGAGAGTACTGGCCAGCAAAACGCGGCGCTGCTGGCC
TGCTTGCCGTCCTGTATTCGGGACTGCTTCACAGAGTTTTGTTGCGTTTT
ATGTAACGGAAGTCTCTTCTCGCTTCTCTATGCATTGTTACAGTACGGTC
AAACTTGACCACGCAAACGTAGATGGGACTACCGGCGTGTATAATTATAG
TCCGCTTCTGATTCTAGCCGAACGTCCATTGCAGTCCTGCAATCTTGTTA
AAGTTTGCCCCGAAACGTAAATCTCAGCGATGAACGAAGAAAATACAAGT
TTGGCTTCGCCGCTGCGACACAGGAGAGACTCCGCAATTCAGTTGGAAAC
GTGGCAACTTCGGACGTGGCCGGACACCATGATCGGATTCGGATGACCCG
TCTTATGTGTTTCGGATACCATTTCCGCGATCTGAACCCCGTGGACTCGT
TCTGCCTGTTCGTTCTAAACCCGTGTCTACTAATGTTCTGGACACGTCTG
TGCCCTCTCTCTGAACTCCCGAAACATACGTGTGGTTCGGGAAAGGCGGA
GGAGTTGGAGTCAAAGAGGGACTCGGAGAAGCAGCAGGCGGCGCAGGAGG
CGTTCGATTCTTTCGACACGAACGATGACGGTGAGACAAGCAATATGCTG
TATTTTTAGCTACATACACTGGTGTGAGAGCAACGGCGAAACACCATTTC
TTCGGGCAGACGACATGACCTTGTGAGTATTAGGGAGTTGGGTGACCTGG
CCCGCAACGGCCAGCGTACCAAGAAGCTTGTAGTTGGTCGACCCCCCGGC
ACCATCCCCCTTGCTTGTCATGGGGAGCATGTAGCGCCTGTTGTTTCCAT
CGCTTGGCCCCGTGAATGCATTGGAAGTGGTGCTCTGCCTCGCCCCCACG
CCCGACCCAAGATCGATGGCACGACGCTCACGACATATGACACCTCAGGG
ACGGTGGACGTGAAGGAGTTGATCGCAGGGTTGGAGGGGCAGCTCAGGAA
GGACTTCATCAAGCGCATGACCAAGACGATGAAGAGGAAGCCTTCCCCGG
CTGAGGTCGACGAACGGATTTCGGAAATGCCCGGTGGTAGTCTGCTCCCG
ATGGAGGTAAGGACTGCACCTGTTCTACATGGGCTTGGCAGGGATGGTGT
TGTTTTGTCTACCCTAGCTACGTCATTCGCGTTCGTTCTGTATTTTGAAG
GCAATAAATATATTAGAATGTGAGCATTCCAGGAGCACCGAGAGTGAAAG
CCCAAGCCAACTTGCCCCTTTTTTCCCGGGAACTCTTGTGCAGTACTCCG
TTGTTAGCAAAAAACGCCTGCGGAGTACCCCGTATCCAAACTCGCCTCCC
CCTCTTGCACGCGTCCATGCACTTTTGGCTTCAACGAGTGCATGCACGCT
ACGCCCAACCCCCTCGCATTCCTCATCCGCACCAACGGCACGTCGTTCTC
TCCCCAGACACTTCCCCAACCACACACTCCCGCCGCCTCGAAATTTTGCG
TCATCGACCATTGACGCTATCTATAACCCTGCCCAAGCCCTAGCCCAAAG
CCCTCGACGCTCCACGCCATTCCGTATCTTCGGCCACCGCAGCTGGCGCA
AAAGCTGATCGAGAGTTACGACACCAACGGAGACGGAGTCCTCCAGCCGT
CAGAGTTTGCCTCCAAGGCGGATATGCGGGTCAGGCTAGACAGCCTTTTT
GCCGACCGTGCACAGGTGTGGTTATCCCCCTCTTTTTGTCCCTTGCGGTT
TGTTTTTTCTTGGATGTGGCCGCAGTTAGATCATGAGGGAGAAAGATGCG
CCGGGGGTTGCGGAGACGATTTTGCTATGTCGAACTTCGCCTTCTTCGTA
CGCCACTTATCCTGAGCCTCTCTTTGTTGATTCTTACGTCCTGTTGTGTT
TGTTTGTGGCACCGGGGGTTCGTTTTTGTCTCTCATTTAGCGGCTGGATC
AATTCTGTTTGTATGGCGACTACGTAACGTTAGTGAAACATTGACCTGCT
GCTAGTGTTGATTGAATGGTGACAACAACAATAACAACCGTATGCATAGC
TCTTGTGGGCAGCTGCACGGAATGATGTAGACAGGGGTGTCGTTCCATGA
ATACGTAAGGCTTGCCATCGAGGGCACCACCGTCGCCTTATTATCTACAT
TGTATCTGGTATCTTTTGTATCATTTTCGTACGAAAATCCCGCCACTCCA
ACCACAGGAGGCTCGGTTGGAAGCGGCCGCCGCAAGAGAGAGGGAAATCG
AGAACAGGGGGGCAGACAAAGCGCGGCAGGAAGCCAAGGCCAGGGGGCTA
GCCCTACCAGAGGACTTCAACGACGGCCCCCCCACCATCACAGACAAGCT
ACTGTCGGTCCTGCCGTACACTCTGCCTCTGATGGACAGCCTCGTCTTCG
GAGCCCACATCTTCCAGACATTCCCTACCCAGGTACTTCTTGTCGCCGTA
GGGTGGAGCTGGCGTAGCCGTCCTTGTTCAAGTCATTTTTGTGCCAGTTC
GTCTCTCGTTTGGTAGTGAAGTCTTGCCATCACTTGCAGATGCAGATTTT
ATCCGTTGTTTTTCTGAGTCTCGGGACAGTTTGGGCGCCTTGACCGTCTA
GTTTTGGCCTCGCTGGGGTGGTCGATGACTATTCTACCAGCCACAGTTTG
TTTTTCTGTTGGATCGAACCGAAATTGACGTTCTTTCCTCAACGTTTTCT
CCCTGTTTACCATGGAAGCGGGTTGTTGACCACACCTCTGCTCACCCACA
CGGGTTTTCCACGCGGATTGTTTTTCAACAGATTGGACCATATTCTCGTC
GTCACTTACCTTATCTTGAAGCATCGCATATTGTTTGGATTTCTGGTGTT
GTCGATCGCCGTCGGCAGTTGAGCTTCTTGGAGCCTCTGGTGGCGATTCT
GCTTATCTACCGGTCTCTTCCGTTTAGCGGACTGATCCTGTTCTTCGGCC
TGCAGTGGTTTGCTGCGAAGCCGGAGGTGAGCAAGGATTCGTCGATAGCT
GAACAGTTTGTTGCTGTCGTCGTCGATTCGATAGTCGCTGTTCTTATCGT
AGCGTTTGTTCTGGATGGCCTCTAGCGTGGGGTATATCATGCATTGCGTA
GAATGACACTCACATCTATATTCTCTCGTATAGGGGTGATACTCTTATGT
ACGGATGCTGGCCAAAAGAAGAGCACGAAGCACACATCGCCGACCTCCAT
CCGCCGCGTTCTGCGCGCCGGCGATTTGCTGTGATACCCCGCTCTGCATC
CGAGTTTCCTTATGGTTTGTTTTATTTGTTTTCGCACTTGAGCAATCGAC
ATCATTGGGCTTACCATCAAATCGTAACATGTCCAATATTTGACAGTCCT
GCACATCATGTGGTCGGCGGCGTTGAAAATTCAATGCTTTTGGTGTTGGG
TGTCGACACTCCCCCCTCCCCCCCCCCCCCAATTTTTTGTCAGTGTACCC
CCCAAGTTCAATATGTCGGTCGGGCTAGAAACGGAAAGTACCGTTCATCA
CCGCACCACAACCGACGACTTTTCTAACGCAGGTGAACAAGCTGGTGCGG
TTCAACCTCCGGCAAGCGGTCATCCTCGACATCGCCATGTTCTTCCCGTC
CATATTCGCCTTCATCATCACGTCCGTCCTGGGCGAGGACTCGGCGAAAC
TCGCCCCCCTCGCGACCGTCTGCAACGACGTCATCTTCGTGACGGTGGTG
GCCTGCGTGCTGTACTCGATAGCTTCGTCCGCCATCGGGGTATTGCCGGA
GTCGTTGCCCATTCTCGGGAAGATGAACAGGGAGAGCACTCGCGCCAAGG
AGGACGATGGCGAGAAGGACGACGGCGAGAAAAGCGACGAGTAG

Coding sequence (CDS) from alignment at chr_28:3324425..3328918-

>Ec-28_003500.1 ID=Ec-28_003500.1|Name=Ec-28_003500.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1314bp|location=Sequence derived from alignment at chr_28:3324425..3328918- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTTCAGAGCTATGAAGCGAATGTCCAATATTCGGCTGCTCTGAAGCT
GTCGCTCCTCTGCCTCGGAGGTGCGGCTGCGTTCATGACGCCGCCTTCGC
TGGTGACACATCCCCGAGAAATGCGCAGCAGCAGCAGTGCATCGCGTCGA
GCAGCCGCAGCTGTTGTGCCACGCGAACGCCGGTTCGTCTTCAACATGGC
GAATGACGAGGCGAGGGAGTCTGCCGTAGCGGCAAGCGGCGCTGAAGAGG
CTGCGGAAAAAGCAGCGAAGTTGAGGGCCTTTGCTGCGGAGCTCCGGTTG
CAGGCGGAGGAGTTGGAGTCAAAGAGGGACTCGGAGAAGCAGCAGGCGGC
GCAGGAGGCGTTCGATTCTTTCGACACGAACGATGACGGGACGGTGGACG
TGAAGGAGTTGATCGCAGGGTTGGAGGGGCAGCTCAGGAAGGACTTCATC
AAGCGCATGACCAAGACGATGAAGAGGAAGCCTTCCCCGGCTGAGGTCGA
CGAACGGATTTCGGAAATGCCCGGTGGTAGTCTGCTCCCGATGGAGCTGG
CGCAAAAGCTGATCGAGAGTTACGACACCAACGGAGACGGAGTCCTCCAG
CCGTCAGAGTTTGCCTCCAAGGCGGATATGCGGGTCAGGCTAGACAGCCT
TTTTGCCGACCGTGCACAGGAGGCTCGGTTGGAAGCGGCCGCCGCAAGAG
AGAGGGAAATCGAGAACAGGGGGGCAGACAAAGCGCGGCAGGAAGCCAAG
GCCAGGGGGCTAGCCCTACCAGAGGACTTCAACGACGGCCCCCCCACCAT
CACAGACAAGCTACTGTCGGTCCTGCCGTACACTCTGCCTCTGATGGACA
GCCTCGTCTTCGGAGCCCACATCTTCCAGACATTCCCTACCCAGTTGAGC
TTCTTGGAGCCTCTGGTGGCGATTCTGCTTATCTACCGGTCTCTTCCGTT
TAGCGGACTGATCCTGTTCTTCGGCCTGCAGTGGTTTGCTGCGAAGCCGG
AGGTGAACAAGCTGGTGCGGTTCAACCTCCGGCAAGCGGTCATCCTCGAC
ATCGCCATGTTCTTCCCGTCCATATTCGCCTTCATCATCACGTCCGTCCT
GGGCGAGGACTCGGCGAAACTCGCCCCCCTCGCGACCGTCTGCAACGACG
TCATCTTCGTGACGGTGGTGGCCTGCGTGCTGTACTCGATAGCTTCGTCC
GCCATCGGGGTATTGCCGGAGTCGTTGCCCATTCTCGGGAAGATGAACAG
GGAGAGCACTCGCGCCAAGGAGGACGATGGCGAGAAGGACGACGGCGAGA
AAAGCGACGAGTAG

Synonyms

The feature 'Ec-28_003500.1' has the following synonyms


Synonym
Esi0009_0054
Esi_0009_0054
TIC 20