Ec-28_003490.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_003490.2
Unique NameEc-28_003490.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1432
Homology
BLAST of Ec-28_003490.2 vs. uniprot
Match: D8LTM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM9_ECTSI)

HSP 1 Score: 2433 bits (6305), Expect = 0.000e+0
Identity = 1395/1431 (97.48%), Postives = 1395/1431 (97.48%), Query Frame = 2
Query:  182 MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTLAAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLHDNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAESPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDISGLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSLSTDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADPQGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTSAPPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADDGSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSRRXXXXXXXXXXXXEAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSSGNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVASAVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSDLRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLERAEEEARKQEETSKLEARRAFEESLRANAAKWSYSSMKKSGGVAKSGGTSRRRRASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDVLVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMVPEPLSQTSSGNAAKGVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGARLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSATHRQGLRTTSVGRQHNRRGQQXXXXXXXXXXXXVRIAGVDSPGPDKDPSLAEAGGQAGQPEHSVERSEDRAGRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHNDTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLAGNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGGREGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDVISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQLDSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQCDDHTPEQKARDADSSTKDFCDVLRRVEELE 4474
            MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTLAAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLHDNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAESPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDISGLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSLSTDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADPQGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTSAPPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADDGSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSRRXXXXXXXXXXXXEAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSSGNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVASAVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSDLRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLERAEEEARKQEETSKLEA                                    RASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDVLVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMVPEPLSQTSSGNAAKGVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGARLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSATHRQGLRTTSVGRQHNRRGQQXXXXXXXXXXXXVRIAGVDSPGPDKDPSLAEAGGQAGQPEHSVERSEDRAGRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHNDTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLAGNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGGREGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDVISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQLDSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQCDDHTPEQKARDADSSTKDFCDVLRRVEELE
Sbjct:    1 MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTLAAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLHDNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAESPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDISGLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSLSTDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADPQGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTSAPPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADDGSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSRRXXXXXXXXXXXXEAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSSGNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVASAVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSDLRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLERAEEEARKQEETSKLEA------------------------------------RASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDVLVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMVPEPLSQTSSGNAAKGVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGARLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSATHRQGLRTTSVGRQHNRRGQQXXXXXXXXXXXXVRIAGVDSPGPDKDPSLAEAGGQAGQPEHSVERSEDRAGRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHNDTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLAGNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGGREGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDVISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQLDSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQCDDHTPEQKARDADSSTKDFCDVLRRVEELE 1395          
BLAST of Ec-28_003490.2 vs. uniprot
Match: A0A6H5L5N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N1_9PHAE)

HSP 1 Score: 2017 bits (5226), Expect = 0.000e+0
Identity = 1187/1435 (82.72%), Postives = 1240/1435 (86.41%), Query Frame = 2
Query:  182 MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTLAAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLHDNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAESPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDISGLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSLSTDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADPQGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTSAPPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADDGSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSRRXXXXXXXXXXXXEAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSSGNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVASAVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSDLRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLERAEEEARKQ----EETSKLEARRAFEESLRANAAKWSYSSMKKSGGVAKSGGTSRRRRASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDVLVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMVPEPLSQTSSGNAAKGVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGARLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSATHRQGLRTTSVGRQHNRRGQQXXXXXXXXXXXXVRIAGVDSPGPDKDPSLAEAGGQAGQPEHSVERSEDRAGRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHNDTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLAGNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGGREGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDVISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQLDSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQCDDHTPEQKARDADSSTKDFCDVLRRVEELE 4474
            M ATAPAWEDDYSPASSKPSIVDQGQRTATA  LDPTNEENDLDLSKPTLAAAVIRDAE RCLQQRERTSQAMERALAEV+KA RAA+AETVRHQLRDL DNE DGQD RGK WTPHTRVGHRNSW R+AKVGRATG +R PAWAKDFHEMKRR SWASALE T+E EVPP LPEVPLEPPP PVRRGTIVSAVLAAVAESPSSPPSTSSER G  GNSGPVLDDDWVVRKFAQIRRRSR IDSAIGDISG HKQAQPS PVVDARK SPNTHPMRIGGMVTLEPLLQRD T  DDAGSLSTD GV PHLTQ GETL PLP+ S+E QG+HHDAI QTTVDD V AQADPQGSLLPPTNQDET ED  LEPPG PF  AENFQAWPHVLPSPREGQHGTSA  AICE+DR PVA RAT EERL +EGKL +VSPEERALSLPSSSLVADDGSGEL+PLGR ALWDARGPVSAGGGRGTGLRGR GQG   GA+GGT+WSR  XXXXXXXX   E AKN+KE+RAKMVLEVLARSEHIFRCNAERRRRRS GNGIGKRALENVATKDGEEGRAATAP SE R YTSP  GGRQPAKVM ASAV+AGND INSR NDATT    DNSSKPNLKNQSANIRGG SSSS P SD   DK+ES AGHGP+AGGARP ++EAAK+E+RESG F+AAKRVAAR+RLERAEEEARKQ    EE SKLEARRAFEESLR N  KWSYSSMKK GGVAKS GTSRRRRASAP S+GISSTRPS LSLGS D S  PLGVS PPAAGT+GS RDVLVRVRVPVAA+EDTTAT GSTTL P GGGTPLPDTQVPDDDGN L NGMVPEPL QTSSGN  KGVNAS   XXXXXXXXXXXXXXXXXXXXXXXXXX +SS LLEELER AHGSI +FKGWKHRDV DRRRST Q+E++KADG+AREGA LSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVA ASAN ALPSATH+QGL ++SV RQHNR GQ XXXXX       VRIA VD PG D+DP +AEAGGQAGQP+ SVERSEDRAGRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNED  DGVGART+PMD SDV DP ESVEKTSH D FHV+DT  RL VP  VIDE AQIVLS++EREGP GRPA Q VT+EPLA NPA REP TSQ+RSTARRRYNSV  RTEE+G IPWR G VET QASGGGREGG GIIGNGSESRAS ALESRFRRSRRRKSQENMGV+  A           +  YEKGI GGTEAVAASDATPTAAN FEELAL RRDEG PQA   LDS VDCSGDGDD EDA+MRA+DLH S+HRTLEGG+ ALGVQTRGQESNA CDDHTPE KARDADSST  FCDVL  VEELE
Sbjct:    1 MAATAPAWEDDYSPASSKPSIVDQGQRTATAAELDPTNEENDLDLSKPTLAAAVIRDAEHRCLQQRERTSQAMERALAEVVKAERAAKAETVRHQLRDLQDNENDGQDHRGKDWTPHTRVGHRNSWARQAKVGRATGPIRSPAWAKDFHEMKRRASWASALEITMEYEVPPILPEVPLEPPPVPVRRGTIVSAVLAAVAESPSSPPSTSSERKGKTGNSGPVLDDDWVVRKFAQIRRRSRSIDSAIGDISGSHKQAQPSAPVVDARKISPNTHPMRIGGMVTLEPLLQRDTTDADDAGSLSTDRGVLPHLTQGGETLCPLPMTSKEYQGRHHDAIHQTTVDDIVAAQADPQGSLLPPTNQDETNEDAPLEPPGTPFVGAENFQAWPHVLPSPREGQHGTSAQAAICEEDRPPVAQRATHEERLQQEGKLFDVSPEERALSLPSSSLVADDGSGELNPLGRSALWDARGPVSAGGGRGTGLRGRCGQGGAVGAKGGTMWSRWRXXXXXXXXAAREEAKNAKERRAKMVLEVLARSEHIFRCNAERRRRRSLGNGIGKRALENVATKDGEEGRAATAPTSEERAYTSPDYGGRQPAKVMAASAVAAGNDKINSRENDATTSTQGDNSSKPNLKNQSANIRGGNSSSSSPESDHYTDKYESAAGHGPSAGGARPVEKEAAKIEQRESGRFMAAKRVAARKRLERAEEEARKQAVLKEEASKLEARRAFEESLRTNFPKWSYSSMKKGGGVAKSDGTSRRRRASAPASNGISSTRPSSLSLGSIDESATPLGVSAPPAAGTSGSNRDVLVRVRVPVAAKEDTTATTGSTTLAPSGGGTPLPDTQVPDDDGNDLFNGMVPEPLPQTSSGNTVKGVNASGAAXXXXXXXXXXXXXXXXXXXXXXXXXXAKSSSLLEELEREAHGSIVAFKGWKHRDVFDRRRSTFQQEMDKADGVAREGAGLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVARASANGALPSATHQQGLPSSSVRRQHNRHGQXXXXXXHQGEEDAVRIADVDFPGADQDPFVAEAGGQAGQPKRSVERSEDRAGRRPHLGLRERXXXXXXXXXXXXXXXXXQHHLRRWDSLSSQQGNSSNEDTGDGVGARTSPMDDSDVQDPQESVEKTSHVDAFHVNDTRNRLMVPIDVIDETAQIVLSESEREGPAGRPATQKVTSEPLARNPARREPGTSQKRSTARRRYNSVGRRTEEYGTIPWREGGVETVQASGGGREGGAGIIGNGSESRASAALESRFRRSRRRKSQENMGVQLRA---------VEENDYEKGIDGGTEAVAASDATPTAANIFEELALIRRDEGAPQAQGHLDSLVDCSGDGDDDEDADMRAKDLHASMHRTLEGGLGALGVQTRGQESNASCDDHTPEHKARDADSSTTVFCDVLHSVEELE 1426          
BLAST of Ec-28_003490.2 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.530e-43
Identity = 103/104 (99.04%), Postives = 104/104 (100.00%), Query Frame = -3
Query: 6530 QVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEKXXXXXSDE 6841
            +VNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEKXXXXXSDE
Sbjct:  334 EVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGEKXXXXXSDE 437          
BLAST of Ec-28_003490.2 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 7.010e-16
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = -3
Query: 6584 QVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 6841
            Q+NKLVRFN++QA+ LDIA+  P +   I  +VLG D++KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:  100 QINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNREN 185          
BLAST of Ec-28_003490.2 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.150e-15
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = -3
Query: 6584 QVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 6841
            Q+NKLVRFN++QA+ LDIA+  P +   I  +VLG D++KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:  182 QINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNREN 267          
BLAST of Ec-28_003490.2 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.530e-14
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = -3
Query: 6584 QVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 6841
            Q+NKLVRFN++QA+ LDIA+  P +   I  +VLG D++KLAPLA   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+
Sbjct:  319 QINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNREN 404          
BLAST of Ec-28_003490.2 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-12
Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = -3
Query: 6563 QVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDD 6841
            QVNKLVRFN++QA+ LDIA+  P +   + +  LG+D+ KL PLA   +DV+FV ++A V YS+ +S+ G  P  LP+LG++NRE+   +E++
Sbjct:  320 QVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEEE 412          
BLAST of Ec-28_003490.2 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.240e-10
Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = -3
Query: 6590 VNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNR 6838
            +NKL+RFN+ QA+  DIA+  PS+F  ++T  LG D+ K++P+  +  D++ V++V  V YSIA+SA G +P  +P  GK+NR
Sbjct:  316 INKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398          
BLAST of Ec-28_003490.2 vs. uniprot
Match: A0A813HCT1_POLGL (Calmodulin n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HCT1_POLGL)

HSP 1 Score: 66.2 bits (160), Expect = 4.140e-7
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = -3
Query: 6560 TQVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAP----LATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES---TRAKEDDG 6844
            T++  L+RFNLRQ+VILDIA+F P I + +I+  L  D+AK AP    LA   N ++F  +VACV YS  SS +GV P  LP + +M  E+   TR  +D G
Sbjct:  319 TELPTLLRFNLRQSVILDIALFVPGILSGVIS--LAADAAK-APISEELAFAGNGIVFALLVACVAYSTGSSLLGVAPRGLPFISEMAGEAISDTRPNDDAG 417          
BLAST of Ec-28_003490.2 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 4.960e-7
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = -3
Query: 6632 QVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIG 6841
            +VNKLVRFN++QA+ LDIA+  P +   I   +LG D+ KLAPL+   +DV+FV ++A V YS+ +SA G
Sbjct:  319 RVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
The following BLAST results are available for this feature:
BLAST of Ec-28_003490.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LTM9_ECTSI0.000e+097.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5N1_9PHAE0.000e+082.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTM8_ECTSI1.530e-4399.04TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
A0A6H5KVD7_9PHAE7.010e-1652.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUU9_9PHAE4.150e-1552.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LS19_ECTSI1.530e-1452.33EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
A0A2I6U1M4_SACJA1.140e-1246.24Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
A0A6H5JY95_9PHAE3.240e-1044.58EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A813HCT1_POLGL4.140e-746.08Calmodulin n=2 Tax=Polarella glacialis TaxID=89957... [more]
D7FRG5_ECTSI4.960e-750.00EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3312398..3324756 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length6860
Hectar predicted targeting categoryother localisation
Gene idEc-28_003490.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003490Ec-28_003490Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 3312398..3324756 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003490.2.1Ec-28_003490.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3312398..3312774 +
Ec-28_003490.2.2Ec-28_003490.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3314541..3314689 +
Ec-28_003490.2.3Ec-28_003490.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3314927..3315222 +
Ec-28_003490.2.4Ec-28_003490.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3315685..3316546 +
Ec-28_003490.2.5Ec-28_003490.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3317173..3317257 +
Ec-28_003490.2.6Ec-28_003490.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3317781..3318320 +
Ec-28_003490.2.7Ec-28_003490.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3319011..3319144 +
Ec-28_003490.2.8Ec-28_003490.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3319393..3319639 +
Ec-28_003490.2.9Ec-28_003490.2.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3319837..3320089 +
Ec-28_003490.2.10Ec-28_003490.2.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3320394..3320723 +
Ec-28_003490.2.11Ec-28_003490.2.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3320931..3321754 +
Ec-28_003490.2.12Ec-28_003490.2.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3321994..3324756 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0034905UTR:Ec-28_003490.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 3312398..3312579 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003490.2CDS:Ec-28_003490.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 3312580..3312774 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0034903UTR:Ec-28_003490.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 3322375..3324756 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003490.2Ec-28_003490.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 3312580..3322374 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_003490.2 ID=Ec-28_003490.2|Name=Ec-28_003490.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1432bp
MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTL
AAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLH
DNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHE
MKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAE
SPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDIS
GLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSL
STDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADP
QGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTS
APPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADD
GSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSR
RRKQKEEEEAAAREAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSS
GNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVAS
AVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSD
LRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLE
RAEEEARKQEETSKLEARRAFEESLRANAAKWSYSSMKKSGGVAKSGGTS
RRRRASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDV
LVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMV
PEPLSQTSSGNAAKGVNASAAAAAAADKARERQRDRRRRHRRKEREEEER
SSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGA
RLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSA
THRQGLRTTSVGRQHNRRGQQQQQQQHQGEGDGVRIAGVDSPGPDKDPSL
AEAGGQAGQPEHSVERSEDRAGRRPHLGLRERQRRRRKRQRSRKQPRQRQ
HHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHN
DTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLA
GNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGG
REGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDV
ISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQL
DSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQ
CDDHTPEQKARDADSSTKDFCDVLRRVEELE*
back to top

spliced messenger RNA

>Ec-28_003490.2 ID=Ec-28_003490.2|Name=Ec-28_003490.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6860bp|location=Sequence derived from alignment at chr_28:3312398..3324756+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATCCAGTACCCAGCCGGTTTCCCTCCACTCACTGAAAAGACTCCACCACA
TCCCGTTCGACTGTGGGTATATCTCGAATGGGTAGTCTTTCTGTGTGTGT
TTTTATTATTCCTTAATCCACGCGATATGCAGCAGAAATATTCTACAGGG
TGATTGGTTGTTGTTGTTGTTCCAGCAAGGAGATGACAGCCACAGCCCCC
GCTTGGGAAGACGATTATTCCCCTGCCTCATCTAAGCCGAGCATCGTCGA
TCAAGGGCAACGAACCGCGACAGCGGTGGGCCTTGACCCTACAAACGAAG
AGAACGATCTTGATCTATCCAAGCCGACCCTTGCAGCCGCAGTCATTCGA
GACGCGGAGCGCCGATGTTTGCAGCAGCGCGAAAGAACCAGCCAAGCAAT
GGAAAGAGCGTTGGCCGAAGTGATCAAAGCCGGGCGCGCGGCGCAAGCCG
AGACGGTGAGGCACCAGCTCCGCGACCTTCATGACAACGAAAAGGATGGT
CAGGATGATCGAGGGAAGGCTTGGACGCCGCATACGCGAGTAGGGCATCG
GAACTCGTGGGACCGTAAGGCGAAGGTCGGGCGGGCCACGGGACTAGTCA
GACCCCCCGCGTGGGCGAAAGACTTTCACGAGATGAAGCGCCGCGTATCG
TGGGCATCCGCGCTAGAGAGCACGATCGAAGACGAGGTGCCCCCATTCCT
TCCCGAGGTGCCCCTCGAGCCGCCGCCGGCTCCTGTGAGAAGGGGCACGA
TAGTGTCGGCTGTGTTGGCGGCGGTGGCCGAATCTCCGTCTTCACCCCCT
TCGACAAGCTCCGAACGAAATGGCACAATGGGGAATTCGGGGCCGGTTCT
CGACGACGACTGGGTGGTGCGAAAGTTTGCCCAGATCCGAAGACGCTCTA
GGGGCATCGATTCCGCCATAGGGGATATTTCGGGGTTGCACAAGCAAGCG
CAACCCTCAGTGCCGGTCGTCGACGCCAGGAAAACAAGTCCGAACACCCA
TCCGATGCGGATCGGGGGTATGGTGACACTTGAACCCCTCCTTCAGCGAG
ACGCGACGGCCACTGATGATGCCGGAAGCCTGTCCACCGACAGCGGTGTT
TTTCCGCATCTCACGCAGAGCGGGGAGACACTGCGCCCGCTACCTCTGGC
CTCAAGAGAATGTCAAGGCCAGCACCATGATGCCATCGATCAAACGACGG
TCGACGACACTGTCGTTGCTCAAGCGGACCCCCAAGGCAGTCTTCTCCCG
CCGACAAACCAAGATGAAACAGGCGAAGACACACAGCTCGAACCACCCGG
AAACCCCTTCGGCGCGGCAGAGAATTTCCAAGCATGGCCTCACGTTCTGC
CATCACCTCGAGAAGGACAACACGGGACCAGCGCCCCACCAGCGATATGC
GAACAAGATCGCGCTCCTGTCGCCGATCGAGCGACGCGAGAAGAGCGACT
GCTAGAAGAAGGGAAGCTTTTGGAAGTTTCGCCCGAAGAGAGGGCGTTGT
CCCTCCCAAGCAGCAGCCTTGTCGCTGACGATGGGAGCGGAGAGCTCGAC
CCTCTCGGCCGCAGGGCCCTGTGGGACGCGCGCGGGCCTGTGTCGGCAGG
AGGCGGTCGGGGCACTGGTCTGCGCGGACGAAGTGGCCAGGGCCGTGGCG
CGGGCGCTGAAGGGGGGACAGTGTGGTCAAGACGGAGAAAGCAAAAGGAG
GAGGAGGAAGCAGCAGCCAGAGAAGCGGCCAAGAACTCGAAGGAGAAACG
GGCGAAAATGGTCCTAGAGGTCCTTGCCCGTAGCGAGCATATCTTCCGGT
GCAACGCGGAAAGAAGAAGAAGAAGATCGTCGGGAAACGGCATAGGAAAA
CGGGCGCTAGAGAACGTGGCTACCAAAGATGGCGAAGAAGGGCGGGCAGC
GACAGCACCGAAGAGTGAAGCACGGCCTTACACGAGCCCCGCTTCTGGCG
GCCGGCAGCCAGCCAAGGTCATGGTTGCCTCGGCCGTTTCCGCTGGGAAC
GACAACATCAACAGCCGCGGCAACGACGCCACCACCTGTGCCCACAAGGA
CAACAGCAGCAAGCCCAACCTGAAAAATCAATCGGCGAACATCCGAGGCG
GAAAGTCGTCATCGTCATTCCCGGGGTCCGATCTCCGCCCCGACAAACAC
GAAAGTCCGGCTGGACACGGTCCCACTGCAGGAGGAGCGAGGCCGGGGGA
CGAAGAGGCAGCGAAAGTAGAGCGAAGGGAAAGCGGGGCATTCGTGGCCG
CCAAGCGCGTAGCAGCCAGGAGGCGACTAGAGAGGGCAGAGGAGGAAGCA
CGGAAACAGGAGGAGACGTCAAAGCTGGAAGCAAGGCGGGCTTTCGAGGA
AAGTCTTCGAGCAAACGCCGCGAAATGGTCGTATTCCTCAATGAAAAAAA
GTGGCGGGGTCGCGAAAAGCGGAGGAACCTCCAGGAGAAGGAGGGCGTCG
GCTCCGACTTCCAGTGGCATCTCTTCCACCCGGCCCTCCGGTCTGTCCTT
GGGCTCAACCGACGGATCAACAATCCCTCTTGGGGTGTCCGTTCCTCCTG
CAGCAGGCACCAACGGCAGTACCAGGGACGTTTTGGTGAGGGTGCGGGTG
CCGGTAGCAGCTCAGGAGGACACGACAGCAACGGCGGGATCAACAACGCT
AACACCGGGCGGGGGCGGCACCCCGCTGCCCGACACACAGGTACCTGATG
ACGACGGCAACTACCTTGTCAACGGGATGGTTCCTGAGCCATTGTCACAA
ACATCGTCGGGGAATGCTGCCAAGGGCGTCAACGCCTCTGCCGCCGCCGC
CGCCGCCGCCGATAAAGCTAGGGAACGGCAACGGGACCGGCGTCGAAGGC
ATCGGCGAAAGGAGAGGGAGGAGGAAGAAAGGTCGTCGCGCCTGCTGGAG
GAGCTTGAAAGAGGGGCGCATGGCTCCATCGCGTCTTTCAAGGGGTGGAA
ACATCGTGACGTGTTAGACCGGCGACGGTCGACCTTACAGCGGGAGCTGG
AAAAAGCTGATGGCATGGCGAGAGAGGGCGCGAGGTTGAGCACGTCTGCA
TCGTCCTTGGCGAAGCGCCGTCTCAAGACCACGGCAGCACCGATGACAGC
GAGAACAGCAACAGCGTCCGTAACAATCGCGGGCGGCAGAGGTGTCGCCG
GTGCAAGTGCTAATGATGCACTGCCTTCGGCGACGCATCGACAGGGATTG
CGGACCACGTCTGTCGGTCGTCAACACAACCGCCGCGGGCAGCAGCAGCA
GCAACAGCAACATCAGGGTGAAGGGGACGGTGTACGTATTGCCGGCGTCG
ATTCCCCCGGGCCCGACAAAGACCCGTCCTTGGCTGAGGCAGGCGGACAA
GCGGGACAACCGGAACACTCGGTGGAACGTTCCGAAGACCGGGCAGGTAG
AAGACCGCATCTAGGACTCCGGGAAAGACAAAGAAGACGCCGAAAAAGGC
AAAGGTCGCGTAAGCAGCCGCGGCAGCGGCAGCATCACCTGCGACGCTGG
GATTCCCTTAGCAGCCAACAGGGCAACAGCAGCAACGAAGACAACGACGA
CGGCGTGGGGGCGAGAACCACCCCGATGGATGGTTCGGACGTTTTGGACC
CTCCAGAGTCTGTCGAGAAAACGAGCCACAACGACACATTCCACGTAGAC
GACACAAGTTATCGACTGACGGTCCCGACCGGCGTGATCGACGAGAATGC
GCAGATTGTATTATCTGACGCCGAGCGAGAAGGGCCGACCGGGAGGCCGG
CGAAGCAGAACGTTACGGCTGAACCCCTCGCCGGGAATCCCGCCACAAGA
GAGCCCGCAACGTCCCAGAGAAGAAGCACCGCTCGAAGGAGATATAACAG
CGTGGAACCAAGAACGGAAGAGCACGGAGCGATCCCATGGCGGGGGGGGG
AGGTCGAGACAGCACAAGCATCAGGGGGAGGTCGAGAAGGAGGAGTGGGG
ATCATAGGCAACGGGTCCGAGTCACGAGCTTCCGTTGCCTTAGAGAGCCG
TTTTAGGCGAAGCCGGAGGAGGAAGAGTCAAGAAAACATGGGCGTTCGCG
CAGCTGCGCGCGGTCGAAGAGAACGTGACGTGATCTCAATTCAAAAGGTC
TATGAGAAGGGAATTGGGGGCGGCACGGAGGCCGTCGCGGCGTCCGACGC
TACACCGACCGCCGCAAACAGTTTCGAGGAGCTAGCGTTGAGAAGAAGAG
ACGAGGGTACCCCTCAAGCGTATGTCCAACTAGACAGCTCAGTCGATTGC
AGTGGAGATGGTGACGACGTCGAGGATGCTAATATGCGCGCAGAAGATCT
CCACGACAGCTTGCATCGCACGCTAGAGGGGGGGGTGGAGGCGTTGGGGG
TCCAGACGAGGGGACAAGAAAGCAATGCCCAGTGCGACGACCACACGCCA
GAGCAAAAAGCTAGAGACGCTGATAGTTCTACGAAGGACTTCTGCGATGT
TTTGCGCCGCGTAGAAGAGTTGGAATAGAAAGGCAACGAAGATGACGGTC
ACCCGAGGTTGTTGTGAACCACCATGCCTAGCAGCATGGCGAGTCGGGGC
GGCAGTAAAACTGTAGCACCGAATCCTCGTACCAGATATAGCATGCGGGG
CAGAACAGCGGCAGGGACAGTAGCAGGGTCCGGGGGAACAACGAAATAAG
CAGGGCCCGTCAGAATCACCTAATCCGGGAACGGGGTAGCTGTAGTTGAT
GAAGACCAGCAGACTCTCGAAACAAGCGACGTAGAGCGCCCCTGCAGCCC
CAGTGTTAAAGCCCGTAAGTGTACCGTGCAAACATGTACCTGGTAGCGAG
GAGGCAGGAGAAGAACGTCTTCGAAAGACTGAGAGAGGAGAGCCAACAAC
CGACATTATGAGCCAGGGGATGACGATACGATGTAGAGACGACCCACAGG
ACCTGCATATTGTCTTGACGAACAATGTCCCCTAGGAATCGTAATACCCG
TTGTAGGGAATGAGGACGCGCGGAGCTGAATCCTTTGGGATTTCAGGGGC
CACGTTTGAGACATGGAAATGGATGAGGTAGGAGCCTTCCAGGCCCACTC
AGATTTGAGATGTGTACAGCCAATCGCTAGAGAAACGTTGCGCTTAGTTT
ACTCCGTTGTCATCTGTAAATCGGGATTTCGACCCATCCAGAATATTTAT
CGGCGTGTTTTGCCATGCCATTGCCGTTGTTGGCGGCAGACCCTGCTGGG
AGCAGTCTGCCATTCCCTCTCCCCGTTGTCTTCCAACCCTAGCTCACAGT
GTCGAGGTCGTTGGTTTGACACGTGCTGTTTTCGTGGCTCCGGGCGCCGA
CGTAGTCCTTCCAACCACCACATCTACATGCGCCCAACCACATCATATGA
ATAAAGTGGGCGTGTCATTACATCACGTCACACTGGTTTTCGCCTTTTCA
TTCCATGTCTCGTTCACCTCCGGTTCTCATGGTAACATAAGTTACACGCT
CCACGGAGCAACACCGATCGTGGGGAACAAGACGGAATTTCAGATCTTTC
GCGGGACAAGAATAAACCGTACACAATTCGGCAAATCCTCCAATAGCATG
GAAAGCGTCAGAGAGGAAAGGGACACATTCCGCCGCGTCGATCCCGCGGT
ACGTGAGTTTCCAAGGAACCATTCACACACCAACCGCCACGGGTATGCCT
CAGCACAACTACCCCTCTCCATGGCAATCCTCGTACGTAGACGCTAACCT
CGTTCCTGAACAACAAAGTCGACACCGCGCGTCATCTAAGCCGGCGTCGG
AAAGGGCCGACAGACCCGCCAACACAGTAGTCAAAAGTGAAGGCTCTTCA
ATCATCCTGTAAGTTTTCGAGGCAAAGCTCGTCGACAAAGCAATCATGCT
GGCGAGGTGTGGCATAGGAGGACGAAACGACAATCCCCGGAGGGGTGGTA
CGCCATCTGCTCACGACCTAAACATTTGCTCAAGCTATGTAGTGGCCTGC
ACCAACCATGAAGAACCCTCTCAATCCTAACACATATACTTACAACCTTC
TCAGGAGGTTCTTTGGTTGAACCGAAGAAAGCGAAAACAACACGCTCGTC
TGGACAAGCACTTCTTTATGTGAAGGGCTTAGCACGGCAACATAGTCCTG
GCGCCAATTCGACCAAGACAAAGGTACTATACCACGCTGAAGGGAAAAAA
ACAGAAAAAAAGCTCGAAAACACTCAAAACTCGGGTACCACACAAAGCAG
TCGTCAAGTCACCCTAATTTCGTCACAGAGGTTCACGGGCCATCATATCC
CATCCCATCCCATTCCACTTCCGCATTGGCCTGCTAGAGCCCAGCCTCTA
AGTACCAAACCTTTCGAGGGCAACTGTCTATCTATGAATCAAAGCACAAG
CCCCCAGCTCTACGGTTGTCTTTCCAACAATCGCGCACGCACGGTGCACC
TCCGGCAGAACCCTCCGTCTCTAAAGCCCGCCAGGCTCAAAAATACTCTA
TCCACGACGGTAGTCTCTTGAGATCTTCTCCCAATCGTACACAGCACATG
TAACCCCAACAGGCTCTAAGGCCTTCCCCTACTCGTCGCTTTTCTCGCCG
TCGTCCTTCTCGCCATCGTCCTCCTTGGCGCGAGTGCTCTCCCTGTTCAT
CTTCCCGAGAATGGGCAACGACTCCGGCAATACCCCGATGGCGGACGAAG
CTATCGAGTACAGCACGCAGGCCACCACCGTCACGAAGATGACGTCGTTG
CAGACGGTCGCGAGGGGGGCGAGTTTCGCCGAGTCCTCGCCCAGGACGGA
CGTGATGATGAAGGCGAATATGGACGGGAAGAACATGGCGATGTCGAGGA
TGACCGCTTGCCGGAGGTTGAACCGCACCAGCTTGTTCACCTGCGTTAGA
AAAGTCGTCG
back to top

protein sequence of Ec-28_003490.2

>Ec-28_003490.2 ID=Ec-28_003490.2|Name=Ec-28_003490.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1432bp
MTATAPAWEDDYSPASSKPSIVDQGQRTATAVGLDPTNEENDLDLSKPTL
AAAVIRDAERRCLQQRERTSQAMERALAEVIKAGRAAQAETVRHQLRDLH
DNEKDGQDDRGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHE
MKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRGTIVSAVLAAVAE
SPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDIS
GLHKQAQPSVPVVDARKTSPNTHPMRIGGMVTLEPLLQRDATATDDAGSL
STDSGVFPHLTQSGETLRPLPLASRECQGQHHDAIDQTTVDDTVVAQADP
QGSLLPPTNQDETGEDTQLEPPGNPFGAAENFQAWPHVLPSPREGQHGTS
APPAICEQDRAPVADRATREERLLEEGKLLEVSPEERALSLPSSSLVADD
GSGELDPLGRRALWDARGPVSAGGGRGTGLRGRSGQGRGAGAEGGTVWSR
RRKQKEEEEAAAREAAKNSKEKRAKMVLEVLARSEHIFRCNAERRRRRSS
GNGIGKRALENVATKDGEEGRAATAPKSEARPYTSPASGGRQPAKVMVAS
AVSAGNDNINSRGNDATTCAHKDNSSKPNLKNQSANIRGGKSSSSFPGSD
LRPDKHESPAGHGPTAGGARPGDEEAAKVERRESGAFVAAKRVAARRRLE
RAEEEARKQEETSKLEARRAFEESLRANAAKWSYSSMKKSGGVAKSGGTS
RRRRASAPTSSGISSTRPSGLSLGSTDGSTIPLGVSVPPAAGTNGSTRDV
LVRVRVPVAAQEDTTATAGSTTLTPGGGGTPLPDTQVPDDDGNYLVNGMV
PEPLSQTSSGNAAKGVNASAAAAAAADKARERQRDRRRRHRRKEREEEER
SSRLLEELERGAHGSIASFKGWKHRDVLDRRRSTLQRELEKADGMAREGA
RLSTSASSLAKRRLKTTAAPMTARTATASVTIAGGRGVAGASANDALPSA
THRQGLRTTSVGRQHNRRGQQQQQQQHQGEGDGVRIAGVDSPGPDKDPSL
AEAGGQAGQPEHSVERSEDRAGRRPHLGLRERQRRRRKRQRSRKQPRQRQ
HHLRRWDSLSSQQGNSSNEDNDDGVGARTTPMDGSDVLDPPESVEKTSHN
DTFHVDDTSYRLTVPTGVIDENAQIVLSDAEREGPTGRPAKQNVTAEPLA
GNPATREPATSQRRSTARRRYNSVEPRTEEHGAIPWRGGEVETAQASGGG
REGGVGIIGNGSESRASVALESRFRRSRRRKSQENMGVRAAARGRRERDV
ISIQKVYEKGIGGGTEAVAASDATPTAANSFEELALRRRDEGTPQAYVQL
DSSVDCSGDGDDVEDANMRAEDLHDSLHRTLEGGVEALGVQTRGQESNAQ
CDDHTPEQKARDADSSTKDFCDVLRRVEELE*
back to top

mRNA from alignment at chr_28:3312398..3324756+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_003490.2 ID=Ec-28_003490.2|Name=Ec-28_003490.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12359bp|location=Sequence derived from alignment at chr_28:3312398..3324756+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATCCAGTACCCAGCCGGTTTCCCTCCACTCACTGAAAAGACTCCACCACA TCCCGTTCGACTGTGGGTATATCTCGAATGGGTAGTCTTTCTGTGTGTGT TTTTATTATTCCTTAATCCACGCGATATGCAGCAGAAATATTCTACAGGG TGATTGGTTGTTGTTGTTGTTCCAGCAAGGAGATGACAGCCACAGCCCCC GCTTGGGAAGACGATTATTCCCCTGCCTCATCTAAGCCGAGCATCGTCGA TCAAGGGCAACGAACCGCGACAGCGGTGGGCCTTGACCCTACAAACGAAG AGAACGATCTTGATCTATCCAAGCCGACCCTTGCAGCCGCAGTCATTCGA GACGCGGAGCGCCGATGTTTGCAGCAGGTGAGCTAGAAAATGCCGGGAAT GTTGTTCCTTACATAAAGTACTGAGGCTATTGTGACCCTTTCTCAGGACA AGAACACTCTATGCATCGTGAACCGTTGATGGAACTCGCTCTCAACAAGC AACATGTCCCAACAGGCATGCACAGAACGACTCACATCGTTTGAATAGTC CCACCCCAACAGCCGGCGTCAGCGATTGGTCAATGATAGGAACTCTACGC ACTACTCTAGGTTTTCAAAGCGCAGTGCTTCTTTGTTGCGTATGTCCTAA AAAACGAGCTGCGATATGGAGGAGAAGCTATACACCGGCAAGCGACATGG TGGTATGTAATAGAACGACCGAGAAGGACCCCCCACACAACATGCTGGTA GTTGTGGACGAGTGTGTATACTGAAATATTCGCAGTTGTTACCGACGGCA ATCGGTGCAAACACCAACTGATAGAAAATCGTAGAACCTCGCCTTGCAAA ACTTTGCTTCGTCATACGACCGCTGTAATGCCTCCCTCTGGTGACCACCT GCTGACAAAGAAAGAAATAGCCTTCCATCCGTTCGTCTCCGGGACCAAAT CCATGGTCTACTTGGCAAACGTCTGATGCACTCAATAGTGTGTATGGTCT TACTTGAAGCCTTTTCCCGTGCAAACGTTGTTGATTGGTCCCAACCCTAG TGCTGCTGGGCAAGCACGGCTGACCCAGTTGACAGGCGTGAAGAGATGGT AAAGTCGTATATCGGGTTGCCCCGTGTAGGCAAGCAACAGGGGAGAGCAC CATGTTATGACATTATCTGACGCAGGTTCAGTGTGGAGCTAGTCCGACCG CTGTGTGCAGGTTGGAGCCCCTTCGCTTCTTTAGTCTGTTTCCTTCCCCT TCTTTTCTCTCTCAGTCGCTCGCTGCCGCTCACTCCCAGGCAACACTGAG CAACGGGGAACGCTTGCACATCGATTGCTGCTACTAACCATGTAGCCATT GACCGCTACCTGTCTATTGTCGGAATACCAGCAATCTCGGCAGGTGGTCG GGATATTCCTGAACGGTATACCCCCCCAGATGGTACCTTAGTCCAAGGGT ACAAATACCATAACAATGTGCACCACAAGCATCAAGGCACTCAAGCGACA GTCGCAAGAAATTCACCGCCGTAAAGACCCATTAGGAACTCGGAACACAT CCAACTTTGCCAATGATACGTCGGGAGATACCGCGAAGATCCACGTCCGT GGAACGGTCACGTACTTTCAAGTTTCTCAAAAATCACACATATGTTCTAC CGCAGTAGCCTTCGTAAGAAGGACATAATCCACCTCACGATCATGCCTCG TGATTTATGACAGGACTTCGCCGTTATCGCGAAGAGAATTCCTCCTTGTC AATTCAGTGAATGGATCCGACTGTGGATTCTAGAATGGCACCACGCTAGA CTGCAGAAATGCGGTATGGATGTACATAGTGAAAATACTCTTCACCGCAC GTTGTGATTGAAATCGTCCGGGCTTTGTCTCTGTAGTTCGATTTCTTCGT CGGTCAATATTTTACTACAATCACACGAAGTTCGCAGTGGTAATGTTCAC TAAGTGCTCACAGGACCAAATACTATCCAAAGGTCCAATGTATCCAAAGT TTCTGGCACCTGTTTGGGTTCGGCGCCTTTTCGCGAAAGATATACAACTC TCGTGACACTTCCACGATTGAACATGGTACACGTAAATCGATGCCCTGAG ACTTGGTCTCACGGCTTATCTCTTGCGGGTATCGACTGTGCAGCGCGAAA GAACCAGCCAAGCAATGGAAAGAGCGTTGGCCGAAGTGATCAAAGCCGGG CGCGCGGCGCAAGCCGAGACGGTGAGGCACCAGCTCCGCGACCTTCATGA CAACGAAAAGGATGGTCAGGATGATCGAGGGAAGGCTTGGACGTGAGTAT CACTAAGCAGGTTGTGTTGTGTCTTGCCATGTTCGCTGTACGCTCTCCGG GTGTGACGGCTATTGTCTTCGAACACACTAAAGTCGTACACTGTGCTTCC CAACTAATGCAGCTCTTTCTCACAATGCTACAAGCTACGTCGCATTAAAT CTGGGGATCGCCTGCTCCAAACGTAAACAGTCATCCACCCTGATACCGCG CGATATCTCTGAAACCCGAAACATATCAGGCCGCATACGCGAGTAGGGCA TCGGAACTCGTGGGACCGTAAGGCGAAGGTCGGGCGGGCCACGGGACTAG TCAGACCCCCCGCGTGGGCGAAAGACTTTCACGAGATGAAGCGCCGCGTA TCGTGGGCATCCGCGCTAGAGAGCACGATCGAAGACGAGGTGCCCCCATT CCTTCCCGAGGTGCCCCTCGAGCCGCCGCCGGCTCCTGTGAGAAGGGGCA CGATAGTGTCGGCTGTGTTGGCGGCGGTGGCCGAATCTCCGTCTTCACCC CCTTCGACAAGCTCCGAACGAAATGGTGGGTTGGAGTGTCGGGGACCTGA TCTAGTGATTTCAACAACCAGTTCGCAGGAAGTACACAGCGGTACCTACT TTTCCTTTGCTTCAGCACCCTAGCTTTAGTCGACTCACAGCGCGGGGCAG TGTTGAAAAGCTTCGTAGGACGTTGTTGGACGACATATAGGCTGATGAGA TCAGCGAAACCCACCTAAATACCGCGCTTCCACCCTCCCCAACGAAATCC TCGCCTGACGTTTTGGGCACCTAAAGTATTGGGCTAAAATTGTTTGTGGT TCCTACCAACAGAAGATGGCTTTCGAGACCATCATGTCGGGGAACGTGAC AGCCAACTCACTCACGAGCGGAATAACTTATGGTGCAGCTTCAACCCTCC TCTCTCGAGAGCAATGCATCGCAAATACGGAAGAATGTGACGATGAACTC TCTTACATCATTTTGTTGTATCCGATCTGCACGGCAGGCACAATGGGGAA TTCGGGGCCGGTTCTCGACGACGACTGGGTGGTGCGAAAGTTTGCCCAGA TCCGAAGACGCTCTAGGGGCATCGATTCCGCCATAGGGGATATTTCGGGG TTGCACAAGCAAGCGCAACCCTCAGTGCCGGTCGTCGACGCCAGGAAAAC AAGTCCGAACACCCATCCGATGCGGATCGGGGGTATGGTGACACTTGAAC CCCTCCTTCAGCGAGACGCGACGGCCACTGATGATGCCGGAAGCCTGTCC ACCGACAGCGGTGTTTTTCCGCATCTCACGCAGAGCGGGGAGACACTGCG CCCGCTACCTCTGGCCTCAAGAGAATGTCAAGGCCAGCACCATGATGCCA TCGATCAAACGACGGTCGACGACACTGTCGTTGCTCAAGCGGACCCCCAA GGCAGTCTTCTCCCGCCGACAAACCAAGATGAAACAGGCGAAGACACACA GCTCGAACCACCCGGAAACCCCTTCGGCGCGGCAGAGAATTTCCAAGCAT GGCCTCACGTTCTGCCATCACCTCGAGAAGGACAACACGGGACCAGCGCC CCACCAGCGATATGCGAACAAGATCGCGCTCCTGTCGCCGATCGAGCGAC GCGAGAAGAGCGACTGCTAGAAGAAGGGAAGCTTTTGGAAGTTTCGCCCG AAGAGAGGGCGTTGTCCCTCCCAAGCAGCAGCCTTGTCGCTGACGATGGG AGCGGAGAGCTCGACCCTCTCGGCCGCAGGGCCCTGTGGGACGCGCGCGG GCCTGTGTCGGCAGGAGGCGGTCGGGGCACTGGTCTGCGCGGACGAAGTG GCCAGGGCCGTGGCGCGGGCGCTGAAGGGGGGACAGTGTGGTCAAGACGG TGCGTGATCGTAATAGATTGCATGTACATCAGCCAGTGCTGGGTACAAGT CGATACTCGCGCCGAGAATCCCAGCCAGAGCTTCATACCTAGCTTAATTG GGCGCGTTTAGTCAGGCTCGAAAATGGTCACGTATCGTGGTTCGTGTCAA GCACGTTGTCGATCGTTACGTATGACCGATACGCACGTCCGCCATACACA GGCGACCAACAAGTTTATCGATGTTTTTGGATATGTTCCCGACTGATGGT CGTACAACTGATGCTGTATCTGGGAAGAGGGGGCCTTGACCAACCCGTCC ACGTTCACGTCGACCCCGAATCTGATCTTCTCACAACAAGAAAAATGAAA TTGCCTTGCACTGCTGCAGTCGAAACCACGTTGAACTCGCTCGCCCTTCC CCATTGCTGTTTAACGGACGCATCGAACGTGCCGCTGCCGATGGTACAGG TAAGCCAGCAAGGATTCTAAGCTCGCATAGGGCAACGACTTTGAACACCT GGTCAGAACGAATTCATATGTATGTTGCTGGTGTGGGTGTGATGATCTCA GTACATACTCGCACGGCTTTGGCAGCGATCGTGACGTCTCGATCCAACGC GTTCGCTCCTTGCGCATGCGAGCAGGAGAAAGCAAAAGGAGGAGGAGGAA GCAGCAGCCAGAGAAGCGGCCAAGAACTCGAAGGAGAAACGGGCGAAAAT GGTCCTAGAGGTGACGTTTGCGAATACACTTCGCCCACGCAAAAGTCGTC TTCGCCATAGCCACGAGCTGTCCGACTGGACCCAGTACCTTAGCCCTGGG TCGAGGCGGCCATGCTAGACCTGATGCTGTGTGTCCGACTGTCTCTTATT GTCTGGACTGGATTGGCACCTGTTCTTCGCCCCTCCCGAAAAATTGATAG TAACTCATTTTTCCCAGAAACCTAAGCACATGGACACACAAGCAGGAGAG TTGCGAGAATATCAACAATGATTCAATGAACGGGAACGGAACAGTTCTGT CTAGTACGGTTCGAAGAATTCTCCACTTGCAGTGCAGTTGAGCAACAGCG TCTACCGAGTCAATGGCGGAGTTCCCGAAACGATAACAAGGGGTGGATTG GCATGAAGCTCCTGTGCTGAATCGAGAGTCGCCCATTAAAACAGATCCAA CGTGACACCCGTGCGAAGCTTGCACTCGCTGGTGGGCCGGCCTGATACCA TGTGCACCTGCGGCGGGCATCCTTCTCGCGCAGGTCCTTGCCCGTAGCGA GCATATCTTCCGGTGCAACGCGGAAAGAAGAAGAAGAAGATCGTCGGGAA ACGGCATAGGAAAACGGGCGCTAGAGAACGTGGCTACCAAAGATGGCGAA GAAGGGCGGGCAGCGACAGCACCGAAGAGTGAAGCACGGCCTTACACGAG CCCCGCTTCTGGCGGCCGGCAGCCAGCCAAGGTCATGGTTGCCTCGGCCG TTTCCGCTGGGAACGACAACATCAACAGCCGCGGCAACGACGCCACCACC TGTGCCCACAAGGACAACAGCAGCAAGCCCAACCTGAAAAATCAATCGGC GAACATCCGAGGCGGAAAGTCGTCATCGTCATTCCCGGGGTCCGATCTCC GCCCCGACAAACACGAAAGTCCGGCTGGACACGGTCCCACTGCAGGAGGA GCGAGGCCGGGGGACGAAGAGGCAGCGAAAGTAGAGCGAAGGGAAAGCGG GGCATTCGTGGCCGCCAAGCGCGTAGCAGCCAGGAGGCGACTAGAGAGGG CAGAGGAGGAAGCACGGAAACAGGTACGCCAAGCTCTGAGCACGCGCCTG CGTAGTTCCAAAGAGAAGGAAGGGTGTGTTGCATGGGCTTGGCCCTTGAG GCATGCCCTGGTGAACCTCGGCGGGAACATTTTTTGTGTGTCTTTATATC AAGCCTTGTCGCCAAGGTAGCACAGCCGCACAAGGAGGCGTCAGCACGAA AACAGCTTCGGGATCTGGTCGGGGTGGTCCCTGTACACACAATCGGGACA ATTTTTTTGGAAATTGATGCGGGGGGGGGGGTACTCATAGTCGTGCATGC CGCAGTCGTTAGACCATTGGCGTCGCATCCCTTCAAAGCCGGGACGGGGC ACGCCGGGTTCTCACCGAACCAGGCTCTCACATCACCAAGCGCGAAGCGC CGTGATACGGGGAGGGGGGGGGGATGCCATTGACCGATCGTCTCCGTTAT GTGCGCATGACATGATATATATTCAGCGGACAGAAAGGTCTGGGGACACC TACCTCTCTCAGGCCGTGTCAAAGCATCGTGGACATTTGTTTTTTACCTT AAGAGTCCTGGGAAAGGAAAGCAGAATGGTGATTTCGTGAACTGGCAAAC GTGCGTCAACAAAAAAATACAAAAAATGAGCTTCATTACCTATTTAGGGT TGTCGGTTGTCACCCTTTTCATTGTCACTCCGCTCACTTGCCACTTCGCT CACATGGGTGCAGGAGGAGACGTCAAAGCTGGAAGCAAGGCGGGCTTTCG AGGAAAGTCTTCGAGCAAACGCCGCGAAATGGTCGTATTCCTCAATGAAA AAAAGTGGCGGGGTCGCGAAAAGCGGAGGAACCTCCAGGAGAAGGAGGTA TTACTACTGTACCTGTGTTTGGCACAGTTCATCGACAAGAATCTGCCGAC ATGGAAAACATTCGCCGCTTCGGTGATTTCCTTGTACGAGTTCTCGGTGG TACCCAGGACCTCCTCTCAACCAGATCGACATAGTGCGGCACTAGGCAGA TATAGTCACGATTTCTAATGCCGACAAGCAGACAAAACAATGTTACCTAC ATCACAACAATCCGTTCACAAACGTTCGTTGGTTGTTTCGCGCAGGGCGT CGGCTCCGACTTCCAGTGGCATCTCTTCCACCCGGCCCTCCGGTCTGTCC TTGGGCTCAACCGACGGATCAACAATCCCTCTTGGGGTGTCCGTTCCTCC TGCAGCAGGCACCAACGGCAGTACCAGGGACGTTTTGGTGAGGGTGCGGG TGCCGGTAGCAGCTCAGGAGGACACGACAGCAACGGCGGGATCAACAACG CTAACACCGGGCGGGGGCGGCACCCCGCTGCCCGACACACAGGTACTAGT TGTGGGGGCGTACTGGTGGTGGGTGGTCGTGATGTGCTAGCGTTCTGTGT CACTATGTAGGGATAGACGTTTCCGCTGGAACCTCACTCAACTCCACCCC CTCGGACAGAAGTACCCATGACGCGCCGGCGGGACTAGCGTTCAGCATAG ACATTTTATTTAGTGCTTCTGAATCACCCACTCCTACAGGTACCTGATGA CGACGGCAACTACCTTGTCAACGGGATGGTTCCTGAGCCATTGTCACAAA CATCGTCGGGGAATGCTGCCAAGGGCGTCAACGCCTCTGCCGCCGCCGCC GCCGCCGCCGATAAAGCTAGGGAACGGCAACGGGACCGGCGTCGAAGGCA TCGGCGAAAGGAGAGGGAGGAGGAAGAAAGGTCGTCGCGCCTGCTGGAGG AGCTTGAAAGAGGGGCGCATGGCTCCATCGCGTCTTTCAAGGGTGAGCGG CGTAGCTGGGTGCACATATCGACGCATTGCTGTCATGTGTCCGGGTCTGC TCCACACTCCCCCCCGGTTTGTTGCTTTGGCTTTTTGGGGGGTTTGGCCC AAAGCCCTTCACCGTGTGCTGTGTTCCCGGGACAAGTGTGCTACTTCGGA GAGCAGCGGAGCTTCATACATACCCCTTAGATACGCCCCACCACAGAAAT TTCACTCCGCGGTGCCGCAACAACACGCAATGCCCCTTCAAGCCCAGTAC ATGAATGTCTCTCTCGTTCCTCCTTTCCCGTCCATCATCCATCTAGGGTG GAAACATCGTGACGTGTTAGACCGGCGACGGTCGACCTTACAGCGGGAGC TGGAAAAAGCTGATGGCATGGCGAGAGAGGGCGCGAGGTTGAGCACGTCT GCATCGTCCTTGGCGAAGCGCCGTCTCAAGACCACGGCAGCACCGATGAC AGCGAGAACAGCAACAGCGTCCGTAACAATCGCGGGCGGCAGAGGTGTCG CCGGTGCAAGTGCTAATGATGCACTGCCTTCGGCGACGCATCGACAGGGA TTGCGGACCACGTCTGTCGGTCGTCAACACAACCGCCGCGGGCAGCAGCA GCAGCAACAGCAACATCAGGGTGAAGGTGCGTGCTTGGTGTCTCACTTTT TGCGGGTCGTCACGTCGCAAGAACGATTGGCGCAACTCAGAAAATGTTTT TCAAGTCGCTGTGTCCAACATTCGGTTTGCTGCGCCCGCAGCACAAGGTG TACGGCTAAATCGACCCACCCCCCGACCCTCCCCACGGACTCCCCATTGT CGTCGCCTCTGTCGCCCCCTTCCCTTCGCAAAGGGGACGGTGTACGTATT GCCGGCGTCGATTCCCCCGGGCCCGACAAAGACCCGTCCTTGGCTGAGGC AGGCGGACAAGCGGGACAACCGGAACACTCGGTGGAACGTTCCGAAGACC GGGCAGGTAGAAGACCGCATCTAGGACTCCGGGAAAGACAAAGAAGACGC CGAAAAAGGCAAAGGTCGCGTAAGCAGCCGCGGCAGCGGCAGCATCACCT GCGACGCTGGGATTCCCTTAGCAGCCAACAGGGCAACAGCAGCAACGAAG ACAACGACGACGGCGTGGGGGCGAGAACCACCCCGATGGATGGTTCGGAC GTTTTGGACCCTCCAGAGTCTGTCGAGAAAACGAGCCACAACGACACATT CCACGTAGACGACACAAGTTATCGACTGACGGTCCCGACCGGCGTGATCG ACGAGAATGCGCAGATTGTATTATCTGACGCCGAGCGAGAAGGGCCGACC GGGAGGCCGGCGAAGCAGAACGTTACGGCTGAACCCCTCGCCGGGAATCC CGCCACAAGAGAGCCCGCAACGTCCCAGAGAAGAAGCACCGCTCGAAGGA GATATAACAGCGTGGAACCAAGAACGGAAGAGCACGGAGCGATCCCATGG CGGGGGGGGGAGGTCGAGACAGCACAAGCATCAGGGGGAGGTCGAGAAGG AGGAGTGGGGATCATAGGCAACGGGTCCGAGTCACGAGCTTCCGTTGCCT TAGAGAGCCGTTTTAGGCGAAGCCGGAGGAGGAAGAGTCAAGAAAACATG GGCGTTCGCGCAGCTGCGCGCGGTCGAAGAGAACGTGACGTGATCTCAAT TCAAAAGGTAGGTACGCACGGGTTGGCGTAATCTTTCGCCAATAACCATC TGTTCCTCGCGCTACTTGGGCATTGTGTAGACGGTCGGCGACTACTACCA TAGATCCAAGGGCTGTAAGTACAATGTAGTCCAGTACCATATACGTACGC TACATGCAGAAAATACGAGGGATTTTACAGCGAGTCTTCGCCGCACACAT CAGTTTTACGCTTGTGCTTGTATTGCGATTTATTGGTTTCGTTCAGGTCT ATGAGAAGGGAATTGGGGGCGGCACGGAGGCCGTCGCGGCGTCCGACGCT ACACCGACCGCCGCAAACAGTTTCGAGGAGCTAGCGTTGAGAAGAAGAGA CGAGGGTACCCCTCAAGCGTATGTCCAACTAGACAGCTCAGTCGATTGCA GTGGAGATGGTGACGACGTCGAGGATGCTAATATGCGCGCAGAAGATCTC CACGACAGCTTGCATCGCACGCTAGAGGGGGGGGTGGAGGCGTTGGGGGT CCAGACGAGGGGACAAGAAAGCAATGCCCAGTGCGACGACCACACGCCAG AGCAAAAAGCTAGAGACGCTGATAGTTCTACGAAGGACTTCTGCGATGTT TTGCGCCGCGTAGAAGAGTTGGAATAGAAAGGCAACGAAGATGACGGTCA CCCGAGGTTGTTGTGAACCACCATGCCTAGCAGCATGGCGAGTCGGGGCG GCAGTAAAACTGTAGCACCGAATCCTCGTACCAGATATAGCATGCGGGGC AGAACAGCGGCAGGGACAGTAGCAGGGTCCGGGGGAACAACGAAATAAGC AGGGCCCGTCAGAATCACCTAATCCGGGAACGGGGTAGCTGTAGTTGATG AAGACCAGCAGACTCTCGAAACAAGCGACGTAGAGCGCCCCTGCAGCCCC AGTGTTAAAGCCCGTAAGTGTACCGTGCAAACATGTACCTGGTAGCGAGG AGGCAGGAGAAGAACGTCTTCGAAAGACTGAGAGAGGAGAGCCAACAACC GACATTATGAGCCAGGGGATGACGATACGATGTAGAGACGACCCACAGGA CCTGCATATTGTCTTGACGAACAATGTCCCCTAGGAATCGTAATACCCGT TGTAGGGAATGAGGACGCGCGGAGCTGAATCCTTTGGGATTTCAGGGGCC ACGTTTGAGACATGGAAATGGATGAGGTAGGAGCCTTCCAGGCCCACTCA GATTTGAGATGTGTACAGCCAATCGCTAGAGAAACGTTGCGCTTAGTTTA CTCCGTTGTCATCTGTAAATCGGGATTTCGACCCATCCAGAATATTTATC GGCGTGTTTTGCCATGCCATTGCCGTTGTTGGCGGCAGACCCTGCTGGGA GCAGTCTGCCATTCCCTCTCCCCGTTGTCTTCCAACCCTAGCTCACAGTG TCGAGGTCGTTGGTTTGACACGTGCTGTTTTCGTGGCTCCGGGCGCCGAC GTAGTCCTTCCAACCACCACATCTACATGCGCCCAACCACATCATATGAA TAAAGTGGGCGTGTCATTACATCACGTCACACTGGTTTTCGCCTTTTCAT TCCATGTCTCGTTCACCTCCGGTTCTCATGGTAACATAAGTTACACGCTC CACGGAGCAACACCGATCGTGGGGAACAAGACGGAATTTCAGATCTTTCG CGGGACAAGAATAAACCGTACACAATTCGGCAAATCCTCCAATAGCATGG AAAGCGTCAGAGAGGAAAGGGACACATTCCGCCGCGTCGATCCCGCGGTA CGTGAGTTTCCAAGGAACCATTCACACACCAACCGCCACGGGTATGCCTC AGCACAACTACCCCTCTCCATGGCAATCCTCGTACGTAGACGCTAACCTC GTTCCTGAACAACAAAGTCGACACCGCGCGTCATCTAAGCCGGCGTCGGA AAGGGCCGACAGACCCGCCAACACAGTAGTCAAAAGTGAAGGCTCTTCAA TCATCCTGTAAGTTTTCGAGGCAAAGCTCGTCGACAAAGCAATCATGCTG GCGAGGTGTGGCATAGGAGGACGAAACGACAATCCCCGGAGGGGTGGTAC GCCATCTGCTCACGACCTAAACATTTGCTCAAGCTATGTAGTGGCCTGCA CCAACCATGAAGAACCCTCTCAATCCTAACACATATACTTACAACCTTCT CAGGAGGTTCTTTGGTTGAACCGAAGAAAGCGAAAACAACACGCTCGTCT GGACAAGCACTTCTTTATGTGAAGGGCTTAGCACGGCAACATAGTCCTGG CGCCAATTCGACCAAGACAAAGGTACTATACCACGCTGAAGGGAAAAAAA CAGAAAAAAAGCTCGAAAACACTCAAAACTCGGGTACCACACAAAGCAGT CGTCAAGTCACCCTAATTTCGTCACAGAGGTTCACGGGCCATCATATCCC ATCCCATCCCATTCCACTTCCGCATTGGCCTGCTAGAGCCCAGCCTCTAA GTACCAAACCTTTCGAGGGCAACTGTCTATCTATGAATCAAAGCACAAGC CCCCAGCTCTACGGTTGTCTTTCCAACAATCGCGCACGCACGGTGCACCT CCGGCAGAACCCTCCGTCTCTAAAGCCCGCCAGGCTCAAAAATACTCTAT CCACGACGGTAGTCTCTTGAGATCTTCTCCCAATCGTACACAGCACATGT AACCCCAACAGGCTCTAAGGCCTTCCCCTACTCGTCGCTTTTCTCGCCGT CGTCCTTCTCGCCATCGTCCTCCTTGGCGCGAGTGCTCTCCCTGTTCATC TTCCCGAGAATGGGCAACGACTCCGGCAATACCCCGATGGCGGACGAAGC TATCGAGTACAGCACGCAGGCCACCACCGTCACGAAGATGACGTCGTTGC AGACGGTCGCGAGGGGGGCGAGTTTCGCCGAGTCCTCGCCCAGGACGGAC GTGATGATGAAGGCGAATATGGACGGGAAGAACATGGCGATGTCGAGGAT GACCGCTTGCCGGAGGTTGAACCGCACCAGCTTGTTCACCTGCGTTAGAA AAGTCGTCG
back to top

Coding sequence (CDS) from alignment at chr_28:3312398..3324756+

>Ec-28_003490.2 ID=Ec-28_003490.2|Name=Ec-28_003490.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=4296bp|location=Sequence derived from alignment at chr_28:3312398..3324756+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACAGCCACAGCCCCCGCTTGGGAAGACGATTATTCCCCTGCCTCATC
TAAGCCGAGCATCGTCGATCAAGGGCAACGAACCGCGACAGCGGTGGGCC
TTGACCCTACAAACGAAGAGAACGATCTTGATCTATCCAAGCCGACCCTT
GCAGCCGCAGTCATTCGAGACGCGGAGCGCCGATGTTTGCAGCAGCGCGA
AAGAACCAGCCAAGCAATGGAAAGAGCGTTGGCCGAAGTGATCAAAGCCG
GGCGCGCGGCGCAAGCCGAGACGGTGAGGCACCAGCTCCGCGACCTTCAT
GACAACGAAAAGGATGGTCAGGATGATCGAGGGAAGGCTTGGACGCCGCA
TACGCGAGTAGGGCATCGGAACTCGTGGGACCGTAAGGCGAAGGTCGGGC
GGGCCACGGGACTAGTCAGACCCCCCGCGTGGGCGAAAGACTTTCACGAG
ATGAAGCGCCGCGTATCGTGGGCATCCGCGCTAGAGAGCACGATCGAAGA
CGAGGTGCCCCCATTCCTTCCCGAGGTGCCCCTCGAGCCGCCGCCGGCTC
CTGTGAGAAGGGGCACGATAGTGTCGGCTGTGTTGGCGGCGGTGGCCGAA
TCTCCGTCTTCACCCCCTTCGACAAGCTCCGAACGAAATGGCACAATGGG
GAATTCGGGGCCGGTTCTCGACGACGACTGGGTGGTGCGAAAGTTTGCCC
AGATCCGAAGACGCTCTAGGGGCATCGATTCCGCCATAGGGGATATTTCG
GGGTTGCACAAGCAAGCGCAACCCTCAGTGCCGGTCGTCGACGCCAGGAA
AACAAGTCCGAACACCCATCCGATGCGGATCGGGGGTATGGTGACACTTG
AACCCCTCCTTCAGCGAGACGCGACGGCCACTGATGATGCCGGAAGCCTG
TCCACCGACAGCGGTGTTTTTCCGCATCTCACGCAGAGCGGGGAGACACT
GCGCCCGCTACCTCTGGCCTCAAGAGAATGTCAAGGCCAGCACCATGATG
CCATCGATCAAACGACGGTCGACGACACTGTCGTTGCTCAAGCGGACCCC
CAAGGCAGTCTTCTCCCGCCGACAAACCAAGATGAAACAGGCGAAGACAC
ACAGCTCGAACCACCCGGAAACCCCTTCGGCGCGGCAGAGAATTTCCAAG
CATGGCCTCACGTTCTGCCATCACCTCGAGAAGGACAACACGGGACCAGC
GCCCCACCAGCGATATGCGAACAAGATCGCGCTCCTGTCGCCGATCGAGC
GACGCGAGAAGAGCGACTGCTAGAAGAAGGGAAGCTTTTGGAAGTTTCGC
CCGAAGAGAGGGCGTTGTCCCTCCCAAGCAGCAGCCTTGTCGCTGACGAT
GGGAGCGGAGAGCTCGACCCTCTCGGCCGCAGGGCCCTGTGGGACGCGCG
CGGGCCTGTGTCGGCAGGAGGCGGTCGGGGCACTGGTCTGCGCGGACGAA
GTGGCCAGGGCCGTGGCGCGGGCGCTGAAGGGGGGACAGTGTGGTCAAGA
CGGAGAAAGCAAAAGGAGGAGGAGGAAGCAGCAGCCAGAGAAGCGGCCAA
GAACTCGAAGGAGAAACGGGCGAAAATGGTCCTAGAGGTCCTTGCCCGTA
GCGAGCATATCTTCCGGTGCAACGCGGAAAGAAGAAGAAGAAGATCGTCG
GGAAACGGCATAGGAAAACGGGCGCTAGAGAACGTGGCTACCAAAGATGG
CGAAGAAGGGCGGGCAGCGACAGCACCGAAGAGTGAAGCACGGCCTTACA
CGAGCCCCGCTTCTGGCGGCCGGCAGCCAGCCAAGGTCATGGTTGCCTCG
GCCGTTTCCGCTGGGAACGACAACATCAACAGCCGCGGCAACGACGCCAC
CACCTGTGCCCACAAGGACAACAGCAGCAAGCCCAACCTGAAAAATCAAT
CGGCGAACATCCGAGGCGGAAAGTCGTCATCGTCATTCCCGGGGTCCGAT
CTCCGCCCCGACAAACACGAAAGTCCGGCTGGACACGGTCCCACTGCAGG
AGGAGCGAGGCCGGGGGACGAAGAGGCAGCGAAAGTAGAGCGAAGGGAAA
GCGGGGCATTCGTGGCCGCCAAGCGCGTAGCAGCCAGGAGGCGACTAGAG
AGGGCAGAGGAGGAAGCACGGAAACAGGAGGAGACGTCAAAGCTGGAAGC
AAGGCGGGCTTTCGAGGAAAGTCTTCGAGCAAACGCCGCGAAATGGTCGT
ATTCCTCAATGAAAAAAAGTGGCGGGGTCGCGAAAAGCGGAGGAACCTCC
AGGAGAAGGAGGGCGTCGGCTCCGACTTCCAGTGGCATCTCTTCCACCCG
GCCCTCCGGTCTGTCCTTGGGCTCAACCGACGGATCAACAATCCCTCTTG
GGGTGTCCGTTCCTCCTGCAGCAGGCACCAACGGCAGTACCAGGGACGTT
TTGGTGAGGGTGCGGGTGCCGGTAGCAGCTCAGGAGGACACGACAGCAAC
GGCGGGATCAACAACGCTAACACCGGGCGGGGGCGGCACCCCGCTGCCCG
ACACACAGGTACCTGATGACGACGGCAACTACCTTGTCAACGGGATGGTT
CCTGAGCCATTGTCACAAACATCGTCGGGGAATGCTGCCAAGGGCGTCAA
CGCCTCTGCCGCCGCCGCCGCCGCCGCCGATAAAGCTAGGGAACGGCAAC
GGGACCGGCGTCGAAGGCATCGGCGAAAGGAGAGGGAGGAGGAAGAAAGG
TCGTCGCGCCTGCTGGAGGAGCTTGAAAGAGGGGCGCATGGCTCCATCGC
GTCTTTCAAGGGGTGGAAACATCGTGACGTGTTAGACCGGCGACGGTCGA
CCTTACAGCGGGAGCTGGAAAAAGCTGATGGCATGGCGAGAGAGGGCGCG
AGGTTGAGCACGTCTGCATCGTCCTTGGCGAAGCGCCGTCTCAAGACCAC
GGCAGCACCGATGACAGCGAGAACAGCAACAGCGTCCGTAACAATCGCGG
GCGGCAGAGGTGTCGCCGGTGCAAGTGCTAATGATGCACTGCCTTCGGCG
ACGCATCGACAGGGATTGCGGACCACGTCTGTCGGTCGTCAACACAACCG
CCGCGGGCAGCAGCAGCAGCAACAGCAACATCAGGGTGAAGGGGACGGTG
TACGTATTGCCGGCGTCGATTCCCCCGGGCCCGACAAAGACCCGTCCTTG
GCTGAGGCAGGCGGACAAGCGGGACAACCGGAACACTCGGTGGAACGTTC
CGAAGACCGGGCAGGTAGAAGACCGCATCTAGGACTCCGGGAAAGACAAA
GAAGACGCCGAAAAAGGCAAAGGTCGCGTAAGCAGCCGCGGCAGCGGCAG
CATCACCTGCGACGCTGGGATTCCCTTAGCAGCCAACAGGGCAACAGCAG
CAACGAAGACAACGACGACGGCGTGGGGGCGAGAACCACCCCGATGGATG
GTTCGGACGTTTTGGACCCTCCAGAGTCTGTCGAGAAAACGAGCCACAAC
GACACATTCCACGTAGACGACACAAGTTATCGACTGACGGTCCCGACCGG
CGTGATCGACGAGAATGCGCAGATTGTATTATCTGACGCCGAGCGAGAAG
GGCCGACCGGGAGGCCGGCGAAGCAGAACGTTACGGCTGAACCCCTCGCC
GGGAATCCCGCCACAAGAGAGCCCGCAACGTCCCAGAGAAGAAGCACCGC
TCGAAGGAGATATAACAGCGTGGAACCAAGAACGGAAGAGCACGGAGCGA
TCCCATGGCGGGGGGGGGAGGTCGAGACAGCACAAGCATCAGGGGGAGGT
CGAGAAGGAGGAGTGGGGATCATAGGCAACGGGTCCGAGTCACGAGCTTC
CGTTGCCTTAGAGAGCCGTTTTAGGCGAAGCCGGAGGAGGAAGAGTCAAG
AAAACATGGGCGTTCGCGCAGCTGCGCGCGGTCGAAGAGAACGTGACGTG
ATCTCAATTCAAAAGGTCTATGAGAAGGGAATTGGGGGCGGCACGGAGGC
CGTCGCGGCGTCCGACGCTACACCGACCGCCGCAAACAGTTTCGAGGAGC
TAGCGTTGAGAAGAAGAGACGAGGGTACCCCTCAAGCGTATGTCCAACTA
GACAGCTCAGTCGATTGCAGTGGAGATGGTGACGACGTCGAGGATGCTAA
TATGCGCGCAGAAGATCTCCACGACAGCTTGCATCGCACGCTAGAGGGGG
GGGTGGAGGCGTTGGGGGTCCAGACGAGGGGACAAGAAAGCAATGCCCAG
TGCGACGACCACACGCCAGAGCAAAAAGCTAGAGACGCTGATAGTTCTAC
GAAGGACTTCTGCGATGTTTTGCGCCGCGTAGAAGAGTTGGAATAG
back to top
Synonyms
The feature 'Ec-28_003490.2' has the following synonyms
Synonym
Esi0009_0056
Esi_0009_0056