Ec-28_002420.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_002420.1
Unique NameEc-28_002420.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length94
Homology
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BLAST of Ec-28_002420.1 vs. uniprot
Match: D7FXN5_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN5_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 7.040e-63
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 3 
Query:  120 MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPIGAEATATRTTTASSPI 398
            MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPIGAEATATRTTTASSPI
Sbjct:    1 MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPIGAEATATRTTTASSPI 93
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BLAST of Ec-28_002420.1 vs. uniprot
Match: A0A6H5L4C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C0_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.210e-46
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 3 
Query:  120 MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPI 350
            MGDRD PSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPI
Sbjct:    1 MGDRDIPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPI 77
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BLAST of Ec-28_002420.1 vs. uniprot
Match: L8H910_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H910_ACACA)

HSP 1 Score: 63.9 bits (154), Expect = 2.230e-8
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 3 
Query:  141 SHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVF 335
            S  LF++++P ++TE E    F+   G+ S R+R+D+NE+ VGFV+F D +SA  A+E+F    F
Sbjct:   45 STALFIAEIPLEVTEAEFRSTFSSEPGYISARLRRDRNENTVGFVEFSDHKSAAEAREQFNNFKF 109
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BLAST of Ec-28_002420.1 vs. uniprot
Match: A0A2P6N8W8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N8W8_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 7.220e-8
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 3 
Query:  141 SHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVF 335
            S  LF+++LP DIT+++L  +F    GF+S R+RKDKN + V F++F D ++A  AK   +G  F
Sbjct:   10 SSTLFLAELPFDITQEDLVSIFEVYDGFQSARIRKDKNNNLVAFLEFSDADAAATAKSNAQGIKF 74
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BLAST of Ec-28_002420.1 vs. uniprot
Match: F4PLK3_CAVFA (RNA-binding region RNP-1 domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PLK3_CAVFA)

HSP 1 Score: 59.7 bits (143), Expect = 5.430e-7
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  123 GDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGH 329
            G    P   LFVS+LP D+TE+EL  LF    GF SCR+   + ++ + F DF D  SA +A E  +G+
Sbjct:  208 GQFKDPQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKYPICFCDFRDIPSAIMAMEILQGY 276
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BLAST of Ec-28_002420.1 vs. uniprot
Match: Q55ER7_DICDI (RNA-binding region RNP-1 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55ER7_DICDI)

HSP 1 Score: 55.1 bits (131), Expect = 2.420e-5
Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 3 
Query:  138 PSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKG 326
            P   LFVS+LP D+TE+EL  LF    GF   R+   + +  + F DF+DT+S+  A E  +G
Sbjct:  270 PCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLPMCFCDFIDTQSSMFALEFLQG 332
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BLAST of Ec-28_002420.1 vs. uniprot
Match: UPI0006450842 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450842)

HSP 1 Score: 54.3 bits (129), Expect = 4.190e-5
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 3 
Query:  150 LFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHP 347
            LFVS+LP D+TE+EL  LF    GF S R+     ++ + F DF D  SA +A E   G  FR  P
Sbjct:  251 LFVSNLPKDVTERELSILFRFMRGFVSVRLVHRDGKYPICFCDFRDVPSAAMAMEILNG--FRMDP 314
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BLAST of Ec-28_002420.1 vs. uniprot
Match: A0A1R1YMK2_9FUNG (U1 small nuclear ribonucleoprotein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YMK2_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 4.290e-5
Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 3 
Query:  132 DTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAK 311
            + P+  LF+  LPSD+T+ ELE LF    GF    VR    +HD+ FV++ D   AT AK
Sbjct:   69 NVPNKILFLQQLPSDVTQNELENLFNPFSGF--VEVRTIPGKHDIAFVEYEDEMCATNAK 126
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BLAST of Ec-28_002420.1 vs. uniprot
Match: D3AYT0_POLPP (RNA-binding region RNP-1 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AYT0_POLPP)

HSP 1 Score: 53.9 bits (128), Expect = 5.930e-5
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 3 
Query:  150 LFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKG 326
            LFVS+LP D+TE+EL  LF    GF + R+ + + ++ + F DF DT SA  A E   G
Sbjct:  273 LFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKYPICFCDFRDTLSAAGAMEMLNG 331
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BLAST of Ec-28_002420.1 vs. uniprot
Match: S8AIG8_DACHA (Uncharacterized protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8AIG8_DACHA)

HSP 1 Score: 53.5 bits (127), Expect = 6.840e-5
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 3 
Query:  105 EQAQGMGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDV-GFV--DFLDTESATIAKERFKGHVFRGHPIGAEAT 365
            E+A G  + + PS  LF+ +L  DIT+K+L  LFA        RV  D+      GF   DF+D  SA  AKE+ +     G  +  + T
Sbjct:  182 ERADGSTEGNPPSRTLFIGNLSFDITDKDLNELFAEIRNCTDVRVAIDRRTGQPRGFAHADFVDVASAEAAKEKLQSKSIYGRQVRIDFT 271
The following BLAST results are available for this feature:
BLAST of Ec-28_002420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FXN5_ECTSI7.040e-63100.00RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4C0_9PHAE1.210e-4698.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L8H910_ACACA2.230e-841.54RNA recognition motif domain containing protein n=... [more]
A0A2P6N8W8_9EUKA7.220e-843.08Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
F4PLK3_CAVFA5.430e-742.03RNA-binding region RNP-1 domain-containing protein... [more]
Q55ER7_DICDI2.420e-541.27RNA-binding region RNP-1 domain-containing protein... [more]
UPI00064508424.190e-543.94hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1R1YMK2_9FUNG4.290e-543.33U1 small nuclear ribonucleoprotein n=1 Tax=Smittiu... [more]
D3AYT0_POLPP5.930e-544.07RNA-binding region RNP-1 domain-containing protein... [more]
S8AIG8_DACHA6.840e-534.44Uncharacterized protein n=1 Tax=Dactylellina hapto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2225173..2230130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.4
Seed ortholog evalue5.8e-48
Seed eggNOG ortholog2880.D7FXN5
Length682
Hectar predicted targeting categoryother localisation
Gene idEc-28_002420.1
EggNOG free text desc.RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
EggNOG OGs2F1EU@1,2T2FC@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002420Ec-28_002420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 2225173..2230130 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002420.1Ec-28_002420.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 2225453..2230010 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002420.1.3Ec-28_002420.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2225173..2225594 -
Ec-28_002420.1.2Ec-28_002420.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2226171..2226241 -
Ec-28_002420.1.1Ec-28_002420.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 2229942..2230130 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0024203UTR:Ec-28_002420.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 2225173..2225452 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002420.1CDS:Ec-28_002420.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 2225453..2225594 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0024205UTR:Ec-28_002420.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 2230011..2230130 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_002420.1 ID=Ec-28_002420.1|Name=Ec-28_002420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=94bp
MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVG
FVDFLDTESATIAKERFKGHVFRGHPIGAEATATRTTTASSPI*
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spliced messenger RNA

>Ec-28_002420.1 ID=Ec-28_002420.1|Name=Ec-28_002420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=682bp|location=Sequence derived from alignment at chr_28:2225173..2230130- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCGCCGCCGCGCCGCCGCCGCCGCTTCGGGGATCGACCCAGATAGATAAA
CGGGCATAGTTAGGTCCCGTTAAAACGGAGATTTAGCACCATTGTTGAAC
TCGGGAGCAAGCGCAAGGCAATGGGCGATCGCGACACACCGAGCCACGGG
CTGTTTGTGTCCGACCTTCCCAGTGACATCACCGAAAAGGAGCTGGAGAG
GCTCTTCGCGGGATGCCACGGCTTCGAGTCTTGCAGGGTCAGGAAGGACA
AGAATGAGCACGACGTCGGGTTCGTGGATTTCTTGGACACCGAGAGCGCC
ACCATCGCTAAGGAGCGCTTCAAGGGCCACGTGTTCCGCGGACACCCAAT
AGGTGCAGAAGCAACAGCAACAAGAACAACAACTGCCTCCTCCCCAATAT
GAAACCCCGGGATGTGGATCTACTCCGTCCGATCGATAAACCGCAAGACA
CAGCAAGCAGAGTGCAAGCGCCCGCCGCACGTCCTGTCTGGCCAGGTTAA
CGGCAACGACTCTCCGTCGGTGATGATGGTGATGGTGATGACACCGGCCG
TTTCGGAGGGGCACCGCGGCGGCGCTTCTCTTCGTCTTCGCCGAGCCGTA
CCTTCCTTGCACAACAACACCCCGCCCCCCTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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protein sequence of Ec-28_002420.1

>Ec-28_002420.1 ID=Ec-28_002420.1|Name=Ec-28_002420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=94bp
MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVG
FVDFLDTESATIAKERFKGHVFRGHPIGAEATATRTTTASSPI*
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mRNA from alignment at chr_28:2225173..2230130-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_002420.1 ID=Ec-28_002420.1|Name=Ec-28_002420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4958bp|location=Sequence derived from alignment at chr_28:2225173..2230130- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCGCCGCCGCGCCGCCGCCGCCGCTTCGGGGATCGACCCAGATAGATAAA
CGGGCATAGTTAGGTCCCGTTAAAACGGAGATTTAGCACCATTGTTGAAC
TCGGGAGCAAGCGCAAGGCAATGGGCGATCGCGACACACCGAGCCACGGG
CTGTTTGTGTCCGACCTTCCCAGTGACATCACCGAAAAGGTAAGAACGAT
GATGGTTTCGGGCTTGCTGCTCATGCCCGGGTGCGAATTGCGCTCTCAAA
AAGAGGGGGGGAGTACTTGAGGGAGAGATTGTCGCGGGCGTCACGCGGTG
TGTGTGTGTGTGGCATAGCAACAACGAGAGCACCTGTTGATGCCTCTGTC
GAACATCCCCCACACGGGAGAACCATCGAGGGTCTTCGGGAGCGGGAGAA
CCTCAGGTGCCCTGTGCGCACAAGGGGGTATGGGATCAGCTGCTGCTGCT
GCTGCTGCTGCTGTGCGCCCGCCGCGTGTTGTATGACAGACGGGATGTCA
TTGTTTCTATTCATCCGTAGTCGTGGTGATTCGAGGCGCCTTTATCGTGG
CGTTGGCGCGCGATAGGTGGCCTTATTCTGTAAAGGGAAGATGTGCACCA
CCATGAGCATCACATCTAGGAAATACTTCATTTTGGTTTCGTGCCGTACA
TTGAAGACACACCCCAGCTTACAGAGGAGAGGAGCTGCAAAAGCAGCGGG
CAAAAGCGGCGGCTACTGCTGCAAGAAGCGAGGCTGAACTTATCCCGGGG
CGTTGTTGTTGTCCACCGTCGCCGTTGGTTGCCACGCGAGGATGCTTTGC
TCCCGTCCCTACACACACGTGTCCAACCCTCTTCTGCTCGGCATGTATTG
CTTGCCACCAACCGACATATTATCTCTGGCGTGTGTTTTTTGGGAACAAA
CACACCTACGTTTTTTAAGTGCGCTTGAACGTGCATGGAGCGCACCAGGC
CGCACACCAAAATTCGGGACGCTTTGTGTTCTCGATCCCGCCCGTGGCTA
TTCTGTCCTCCTTGCCCCATTTCACTGCCGTTTGGCTTGGCTTGCGTGTG
TCCTCGGACTTATATGTGCACTGCTGTCGATTCCGAGCGTTTGTTTGCAT
ACCGGATCTTTTGCTTGTACAGCAGCAGTACAGCAGTACGTGCATTGTGG
GGCGGGGAATTTCCGACGATCAACATGTTTGTTTTTTTATCCCATTGATT
GGGGGTTGCCGATCGAGCGACCCGCCCACACTCTTGAGCCGCGCGTCGTC
TCTACCTTGGTTCGGCTGTTGTGCTACATGGGCGCAGGCCTCCCCTTCAT
GGAGCACCAATGCACAGGCAGCGCAGCCAACAGAAAAAAATCCTCGCTGT
TTTTCGCAAGCGCACCCCCACCCCAGACAAGAGGTGTTCCACAGAATAGG
AGACAAAGTTCGCCCGCGGGAAATCAGTTGCATGATCTGGGCGGAGAGCG
AACGTTCCCAAAGTTTAAGATCACTCAGACCAAGAAGGGTCACTACAAAA
TGTTCACCATGTGAATCATGGCATTCCGTATGGTTTTGATCTACAGCAAA
AGTACGTCTGTGTGCTTTTGACCCACGATTGTAGGCGCTACTTTTCGAAG
ATCAGCTCATCCGTCCGGAGGAAAGTGGTCTAGACGCAAGGCACGCTTTT
TTTTTTTTATCGTGTGTGAAATGACATTGACGTGAAATTGGCGTAGAAGA
TGTGGTACACAATCTCGATGTACGTCGAGATGGAACACGACAGCAGCCGG
ACGAAAGGGACGTGGTGAAGTATTTTCAGTGAGTGGGGTGAAACCGGCTT
GAAACTGGGGTTATAATGAGAGGTCGGTTTACGATTTTATTATCGGCCAC
AAACTTTTGGTTGAACGCCGTCGCTGCTGTTGGGTAAAAATGTGGATACC
ATGACGTTCCAAATGTAAAACAAGGCACAGCCACTCTCTTCCTTACAAAA
CTATTTCCCTCCACTCACTGAAAAGACTCCACCACATCCCGTTCGACTGC
TGCTGTGGGTATATCTCGAATGTGTAGTCTTTCTGTGTGTGTTTTTATTA
TTCCTTAAAACTGTTATAAATCATTGCATATAATCGAACGACCAAGGGGT
CTGTCAAAACCGTCAAACCTACACCCCTCCACAACGAACGCTGTTTTTTC
TATATTGCTGCTTGCTGAAAAGACGCAACGGTTCAACGGTTGGCGTTATT
CACAGCAGCAGGCAGCAGACATGCTTCCCCTTTTGCCTACAATACGTGTG
TCGAAACCCTTTGTCTCAAAGCAAAGCGAAGGGCATCGCGTGGGGGTAGG
CAAAGAAGACGCGCGGTCCACGCCAGAGAGTGCATGTAAAACCCCCACGA
CAGCAGTCGTGCAGTTTTTTGGTACGGGCCGGGCCGTAGGCGGTAAGCGG
CCCTCGCTCTGCTACGCACCCAACCGCCTGGTTATCAGTTGGCAGAGGAG
CGGTGTGAGGTACACTGCTGTGGTAGACAGTTCCGATAGTCCCGACTTGG
GAAGATCTGCAGCGATTTGATCATTGGATGATTACTGCTGTTGCAAGTGT
TAGTGTCGTTTCCCTGTGGAATATTTAAAACTGTTCCGGTCTCCAATCAG
TAGTGTATGCATAGATTATCGCCCCCTTAGCCGAGGCGGCGCGGCAGGAT
GACGTGCTCACGCCGCTCGCCATCCGGTCTGGTTTCTTGGCGCTACTACT
AGTACTGTTGAGCAACATGATGTCCTACGCGATATACTACTGCTACTACT
GCAACAATGATAGCAAATTTTGATGATGTGTGTGACGACGTTGCTCTTCG
ATGCCGTACGTACTACAGCACCATTTGCGCTGCGTACTAGACCGGAACGG
TTTTTAATGTGAAGACAACAACAACAACAACAACAACAACAACAACTACA
ACACCATGTAAGCGCTAAGAGCAGGGGAAGTAGAGACAGCCAATGCCGAT
GCTGCCTTTTTGTGGAGCTCGCCGACCATGAACTTCAGCAGTATCAAAAG
CCAATCTCTTCCTTCCTCCCGAGTAGAGATCCTATTGGTCCAGCTGGAAG
CATCGTGATCGCGTGGCGGTCAAGCCGCGGAGATTCCAACCTTGTCAGAA
TGCCCGTTGGGCGTGTGTTTGTTGGTGGTGGCAAGTGGCAATCAACGGTC
GTCATGCAATCGCGACGTTCTTATCTTCATTGTTTTCAATGGGACAGGGA
GACATTGCTGTACCCCGTTGTGTTCGTGATCAACGGCCATGCAGTCACGA
TATACGCATTCCACAGGTGGAATCCTATCGATGAGGATGCACGACAGCCG
AGCTGTCAAGGCTGACACTCTTGTGTCCATGCGAACGTGCAACGTGCGAT
CGCGCGTTGTGCCAGATACTCGCGTCTCAGATGCATCTCCGCTCTCTCTC
TCTCTCTCTCTCTCTCGCCCTGTATACCACTCTGTCCGGAAATATAGGGA
TCATTGTGGGGGGAATGGTGGGGCAAAAGAAAAAAAAACTGAGAAAAGGT
CCTGTGTGACCTTCCTCTTGTGTGACCCCGGCTGATATACGTACGTCAGG
TATCTATGTATACTCTGAAATCTGAAAGGTCTGTAAATTGGCGCCAGAAT
AGATGGGACGAACACATACACACATTTTGTGGTGTTCGGCTTTGTATTTG
TATCCGAATTGTTGTTGTTGTTTGGTTGTTACATTTCGAACAGATTGGTA
CAGCAGTCGTGCGTGGTGCGTGGTAAAATACTGCTGTCATTCGTCATCGT
GCCTCCGTGTACTACTGCTGCTGTATGCGTCATGAGAAAAGAATGTCAAG
TGTTTCGACTATTCTCCTTTGTTTTTCATTTTCTCTTCCTGCTACACCTC
GTCTTGCTTTCTTTACCGTTTCGGTTCATTTCACTGCAGGAGCTGGAGAG
GCTCTTCGCGGGATGCCACGGCTTCGAGTCTTGCAGGGTCAGGAAGGACA
AGAATGAGCAGTGAGTGTGTGTGTGCTTTCTATTTTTCTGTATTTTTGCT
CTTGAACTGCTGTTACGTGTAAACATACTGAGCGAGAGGAGCCCGTTCAG
TGATTTTTTTTTCTTTCGATAAATATGGATACCTGTAGAAAGTGATTTGC
TAAATCTATGGATCCCGGACTACTGCTGTACTTTCTTTTGGATGGATTCG
TTGCGTACAGTACCTGTTTTTGTGTAGAACAAAACATGCTACAATGTATG
CATAACACACACATTGAATCCAATCTCTTCTCCACAGACAGAGGAAGTCC
GGGACACAGCGGTAACGAGTTGATATGTAGCGTTATTGTGATAACCAACC
TGTGTTTTCTGCTGTCCCCGAGTAGCAGGGCTGACAAATATTGTTTGGTG
GCCACACTGCCGTGTTCGCTCTTTGGTTTTTCGACGGTTGTTCCCGAGTG
TCGCATGCGTCGCCGTATGGGCAAAACATTTTTGGGCGAAATGCGCGCGT
TGCGTTGCGCTGTCGCAAAAGGTTTTGTTTCGATTTTTTACTCGCTCTTT
CCCATGTTTACTTGCCTGCTGTGGTCGCCTCTCCAGCGACGTCGGGTTCG
TGGATTTCTTGGACACCGAGAGCGCCACCATCGCTAAGGAGCGCTTCAAG
GGCCACGTGTTCCGCGGACACCCAATAGGTGCAGAAGCAACAGCAACAAG
AACAACAACTGCCTCCTCCCCAATATGAAACCCCGGGATGTGGATCTACT
CCGTCCGATCGATAAACCGCAAGACACAGCAAGCAGAGTGCAAGCGCCCG
CCGCACGTCCTGTCTGGCCAGGTTAACGGCAACGACTCTCCGTCGGTGAT
GATGGTGATGGTGATGACACCGGCCGTTTCGGAGGGGCACCGCGGCGGCG
CTTCTCTTCGTCTTCGCCGAGCCGTACCTTCCTTGCACAACAACACCCCG
CCCCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNN
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Coding sequence (CDS) from alignment at chr_28:2225173..2230130-

>Ec-28_002420.1 ID=Ec-28_002420.1|Name=Ec-28_002420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=282bp|location=Sequence derived from alignment at chr_28:2225173..2230130- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCGATCGCGACACACCGAGCCACGGGCTGTTTGTGTCCGACCTTCC
CAGTGACATCACCGAAAAGGAGCTGGAGAGGCTCTTCGCGGGATGCCACG
GCTTCGAGTCTTGCAGGGTCAGGAAGGACAAGAATGAGCACGACGTCGGG
TTCGTGGATTTCTTGGACACCGAGAGCGCCACCATCGCTAAGGAGCGCTT
CAAGGGCCACGTGTTCCGCGGACACCCAATAGGTGCAGAAGCAACAGCAA
CAAGAACAACAACTGCCTCCTCCCCAATATGA
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Synonyms
The feature 'Ec-28_002420.1' has the following synonyms
Synonym
Esi0033_0131
Esi_0033_0131