Ec-28_002000.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_002000.1
Unique NameEc-28_002000.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length213
Homology
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BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A6H5K4P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P6_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 6.850e-99
Identity = 151/163 (92.64%), Postives = 157/163 (96.32%), Query Frame = 1 
Query:  145 QFCCTISLGAFPPLPPSRGLTRTRRTHSPRALAAISRSVGTRHLEAWIDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATED 633
            +FCCTISLGAFPPLPP RG T TRRTH+PRALAA+SRSVGTRHL   IDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAK+VVVEADGVLTGATKAQNAKIAGKFDGHLRL+EGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATE+
Sbjct:   33 RFCCTISLGAFPPLPPPRGPTCTRRTHAPRALAAVSRSVGTRHLR--IDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKSVVVEADGVLTGATKAQNAKIAGKFDGHLRLTEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEE 193
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BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A192ILY4_9HYPH (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192ILY4_9HYPH)

HSP 1 Score: 90.5 bits (223), Expect = 3.730e-18
Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 1 
Query:  322 RVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQ-FATEDS 636
            R+++G+GI +KG+I NC E+++ G  DA  VEA    V  +G  +G    + A IAG+FDG L     L V S+G+ KGT+RY  +++E GG++ G+IQ F  E+S
Sbjct:   78 RLLVGEGIKLKGEITNCAELVIEGAVDA-RVEASRFQVSNNGTFSGECNVEEADIAGQFDGTLNCRGKLIVRSTGKLKGTLRYGDVEIEGGGRVAGEIQEFGAEES 182
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BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A2S6SPY9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha5_Bin5 TaxID=2013080 RepID=A0A2S6SPY9_9PROT)

HSP 1 Score: 84.0 bits (206), Expect = 4.220e-16
Identity = 37/108 (34.26%), Postives = 68/108 (62.96%), Query Frame = 1 
Query:  313 TAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEDS 636
            T+  ++IG+G+ + G IK   EV ++G  D G+V+  TV+V   G + G  KA+  K+ GKF+G + +++ L++ + G   G + Y  IQ+++GGKL G+I +  +++
Sbjct:   42 TSSSLLIGEGVNITGTIKAENEVTIQGSVD-GDVDCHTVIVSKTGSMKGKLKAEIMKVEGKFEGEMNINDQLHIRTKGSVNGKVFYGSIQIDDGGKLLGEINYRGKNN 148
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BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A369TG62_9PROT (Uncharacterized protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TG62_9PROT)

HSP 1 Score: 85.1 bits (209), Expect = 8.180e-16
Identity = 41/123 (33.33%), Postives = 75/123 (60.98%), Query Frame = 1 
Query:  307 PTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEDS*FRFGRTCEEWPT 675
            P  + ++ +G+ I V G+I++C+ ++V G  +A   +++ + V A G   G+     A+IAG+FDG L + E L + S+G+  GTIRYRG+++E+GG++ G +   +E+     G   E+ P+
Sbjct:   89 PAESKQLTVGRDIEVSGEIRSCDRLVVEGKVEADLSDSRVLEVAASGAFKGSAIIDIAEIAGRFDGDLIVRERLYLRSTGQVNGTIRYRGLEIESGGRIGGTLVELSEEEAQGAGGRGEDAPS 211
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BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A7V2T8V3_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T8V3_9PROT)

HSP 1 Score: 82.0 bits (201), Expect = 3.310e-15
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 1 
Query:  289 DKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLT-GATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEDS 636
            DK+ A P    R+I+GQGI++ G+I+ C+ +IV G       E + + +   G  T G    + A+I+G ++G L +   L + S+G+  GT+RY  +++E GG++ G I    E S
Sbjct:   48 DKSAAMPAEGKRLIVGQGISLSGEIEACDRLIVEGSVQVTLKETRAIEITETGKFTAGKASVEEAEISGVYEGELTVRNRLLIRSTGKVTGTVRYGELEIERGGRISGSISMLDEKS 164
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BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A2D7PCB5_9PROT (Uncharacterized protein n=1 Tax=Candidatus Pelagibacter sp. TaxID=2024849 RepID=A0A2D7PCB5_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 9.960e-15
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 1 
Query:  310 TTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATED 633
            T  G ++IG G++V GDI    EV V G    G V +  + V+  G + G +  + A+I G +DG+L ++  L+VTSSG AKG IRY+ +++  GGK+ G I   ++D
Sbjct:   31 TKEGSIVIGAGVSVTGDIDAPNEVSVNGKH-TGKVVSSKITVKNGGKVDGESSVETAEIEGSYDGNLAVAGTLSVTSSGVAKGEIRYKDLEIALGGKISGTIAEMSDD 137
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BLAST of Ec-28_002000.1 vs. uniprot
Match: UPI0019062186 (polymer-forming cytoskeletal protein n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI0019062186)

HSP 1 Score: 82.0 bits (201), Expect = 3.360e-14
Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 
Query:  304 TPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDI 615
            T    G +++GQGITVKG I+NC  ++V G   A  V A+ + V  DGV+ G  +   A +AG+FDG L +   L V   G  KG +RYR + VE GG +  +I
Sbjct:   64 TVAEEGELVVGQGITVKGGIRNCRRLVVHGTVRA-TVPARGLEVGPDGVVEGRIEVAEATVAGRFDGDLIVDGPLTVAPGGLVKGRVRYRTLTVEAGGHVSAEI 166
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BLAST of Ec-28_002000.1 vs. uniprot
Match: UPI00190C2156 (polymer-forming cytoskeletal protein n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190C2156)

HSP 1 Score: 79.0 bits (193), Expect = 5.210e-14
Identity = 39/111 (35.14%), Postives = 68/111 (61.26%), Query Frame = 1 
Query:  304 TPTTAG--RVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATE 630
            TP  +G  ++I+GQ I +KG+I +C+ ++V G  +A  +E++ + +   G   G+ + + A+I G FDG L   + L + S+G+  GTIR+  I +E GG+L GD+Q   +
Sbjct:   61 TPEVSGGSKLIVGQKIKLKGEIADCDTLVVEGQVEA-TMESRVIQIAESGTFKGSVQVEVAEINGTFDGDLTARQKLVIHSTGKVTGTIRFGKIVIEEGGQLSGDVQVGLD 170
[Close]
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A192IE29_9HYPH (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IE29_9HYPH)

HSP 1 Score: 78.2 bits (191), Expect = 7.030e-14
Identity = 40/119 (33.61%), Postives = 68/119 (57.14%), Query Frame = 1 
Query:  262 GTRHLEAWIDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQ 618
            G R  +A   +  A    A  ++IG+ I VKG+I +CE +++ G  +A     ++  +   GVL G  + Q A+I G+F+G LR+   L V + G A+G I Y  +++E GG++ G+I+
Sbjct:   37 GRRGRDAEDRERRAMAAEAKTLVIGKEIHVKGEIGDCERLLINGTAEATLTNCRSFEISETGVLKGEAEVQRAEIMGRFEGTLRVRGRLTVRAGGRAQGNIAYAELEIEPGGRIDGEIE 155
[Close]
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A1G7S5U0_9HYPH (Protein CcmA, bactofilin family n=1 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7S5U0_9HYPH)

HSP 1 Score: 80.1 bits (196), Expect = 7.610e-14
Identity = 36/106 (33.96%), Postives = 68/106 (64.15%), Query Frame = 1 
Query:  322 RVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGD-IQFATEDS 636
            ++I+GQ I + G+I  C++++V G  +A   E + + V   G   G+     A+IAG+F+G L + E LN+ ++G+  GTIRYR +++E+GG++ G  ++ + E++
Sbjct:   99 KLIVGQNIRMSGEIAACDKLLVEGMVEADLTETRELEVAPTGSFKGSAVIDVAEIAGRFEGDLVVRERLNLRANGQVHGTIRYRALEIESGGRIGGTLVELSAEEA 204
The following BLAST results are available for this feature:
BLAST of Ec-28_002000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4P6_9PHAE6.850e-9992.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A192ILY4_9HYPH3.730e-1842.45Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A2S6SPY9_9PROT4.220e-1634.26Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A369TG62_9PROT8.180e-1633.33Uncharacterized protein n=1 Tax=Ferruginivarius se... [more]
A0A7V2T8V3_9PROT3.310e-1533.33Polymer-forming cytoskeletal protein n=1 Tax=Rhodo... [more]
A0A2D7PCB5_9PROT9.960e-1538.89Uncharacterized protein n=1 Tax=Candidatus Pelagib... [more]
UPI00190621863.360e-1441.35polymer-forming cytoskeletal protein n=1 Tax=Rhodo... [more]
UPI00190C21565.210e-1435.14polymer-forming cytoskeletal protein n=1 Tax=Novih... [more]
A0A192IE29_9HYPH7.030e-1433.61Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
A0A1G7S5U0_9HYPH7.610e-1433.96Protein CcmA, bactofilin family n=1 Tax=Limimonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1789609..1793216 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score82.0
Seed ortholog evalue3.6e-13
Seed eggNOG ortholog1089552.KI911559_gene2258
Length917
Hectar predicted targeting categoryother localisation
Gene idEc-28_002000.1
EggNOG free text desc.Polymer-forming cytoskeletal
EggNOG OGsCOG1664@1,COG1664@2
COG Functional cat.M
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002000Ec-28_002000Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 1789609..1793216 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002000.1Ec-28_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 1789887..1793216 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002000.1.5Ec-28_002000.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1789609..1789967 -
Ec-28_002000.1.4Ec-28_002000.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1790184..1790296 -
Ec-28_002000.1.3Ec-28_002000.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1792428..1792588 -
Ec-28_002000.1.2Ec-28_002000.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1792832..1792835 -
Ec-28_002000.1.1Ec-28_002000.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1792937..1793216 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0020003UTR:Ec-28_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 1789609..1789886 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_002000.1CDS:Ec-28_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 1789887..1789967 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_002000.1 ID=Ec-28_002000.1|Name=Ec-28_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=213bp
MTDGDLHTRIRQEIIVQRPRVSFVLATPIFRSALSLVLIRIFDLDQPHQF
CCTISLGAFPPLPPSRGLTRTRRTHSPRALAAISRSVGTRHLEAWIDKTM
ATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGV
LTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGK
LFGDIQFATEDS*
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spliced messenger RNA

>Ec-28_002000.1 ID=Ec-28_002000.1|Name=Ec-28_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=917bp|location=Sequence derived from alignment at chr_28:1789609..1793216- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGATGGGGACCTGCACACACGGATCAGGCAAGAAATTATCGTTCA
GAGGCCCCGTGTTTCATTCGTTTTGGCCACCCCCATCTTTCGTTCCGCTC
TCTCTCTTGTTTTGATTCGCATTTTCGACCTTGATCAACCACACCAATTT
TGCTGCACCATCTCTCTCGGCGCCTTCCCCCCTCTTCCGCCGTCCCGTGG
ACTCACGCGTACACGTCGCACACACTCGCCCCGAGCTCTTGCAGCCATAT
CACGGTCGGTCGGTACAAGACACCTAGAAGCCTGGATCGACAAGACCATG
GCTACGCCGACAACTGCCGGACGCGTGATTATCGGCCAGGGTATCACAGT
GAAGGGCGACATCAAGAACTGCGAAGAAGTGATCGTTCGCGGCTTCTTCG
ATGCGGGAAACGTAGAGGCAAAGACGGTGGTTGTTGAGGCCGACGGAGTC
CTTACCGGAGCGACCAAGGCCCAGAACGCTAAGATCGCGGGCAAGTTCGA
CGGCCACCTCCGCCTGTCGGAGGGACTTAACGTTACGAGCAGCGGCGAGG
CCAAGGGGACGATCCGATACCGGGGTATCCAGGTTGAGAACGGCGGGAAG
CTGTTCGGGGATATCCAGTTCGCAACAGAGGATTCTTGATTCCGGTTCGG
CCGTACATGTGAAGAGTGGCCAACATTTTATCGGAAAGCCGGAGCGAGAG
CTACGGCATGATTAAGACTGGGTGCTGTCTCGTGCCCTGGAGGGAAGATG
GTTGGGGGGGCGGTGGGGATCCACGTAACTTGACGAATCCGTGGTAGGAG
TTATTTGTAGGATTCCCTGCACCTTTTCGTTTGGCGATCGAACCGCGCTA
TCGTGGTGTTGTTAGGCAACCGCCTTCCTGGTGTCGGCCCGCCTGCGAGC
TGTTTGTATTGTAGCGA
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protein sequence of Ec-28_002000.1

>Ec-28_002000.1 ID=Ec-28_002000.1|Name=Ec-28_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=213bp
MTDGDLHTRIRQEIIVQRPRVSFVLATPIFRSALSLVLIRIFDLDQPHQF
CCTISLGAFPPLPPSRGLTRTRRTHSPRALAAISRSVGTRHLEAWIDKTM
ATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGV
LTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGK
LFGDIQFATEDS*
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mRNA from alignment at chr_28:1789609..1793216-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_002000.1 ID=Ec-28_002000.1|Name=Ec-28_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3608bp|location=Sequence derived from alignment at chr_28:1789609..1793216- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGGATGGGGACCTGCACACACGGATCAGGCAAGAAATTATCGTTCA
GAGGCCCCGTGTTTCATTCGTTTTGGCCACCCCCATCTTTCGTTCCGCTC
TCTCTCTTGTTTTGATTCGCATTTTCGACCTTGATCAACCACACCAATTT
TGCTGCACCATCTCTCTCGGCGCCTTCCCCCCTCTTCCGCCGTCCCGTGG
ACTCACGCGTACACGTCGCACACACTCGCCCCGAGCTCTTGCAGCCATAT
CACGGTCGGTCGGTACAAGACACCTAGAAGGTGAGTGGTGGACAGCAAGA
AGCGAGGGTTATTATTGCGGACCCTCTTTTTCGCGCTCCTCACCGTTTTT
GTCACCACCTGTCTGATGCTGCCTCGCCTAGCCTGGCTCTTCGACCGCCA
CCCGCACAACAGACACGTCACGAGCAGCAGGAGTAGCAGCAGAACCCCCC
CCCCCCGTATCAAGAGCTGCTTTTTCCGCTGGTCTTTTTTTGTGTGGCCA
CCACGCTTGTTCGGCCCTCATCTCTTCTCGACGAGCTCGAGAAATTAATT
CACACGGCAGCAAGAAGAGAGACCCCGCGCGTGCCCGTGCCCCTGAAACT
ACGCTCATCCATCCCCCGTTTCAAACAGGATCGACAAGACCATGGCTACG
CCGACAACTGCCGGACGCGTGATTATCGGCCAGGGTATCACAGTGAAGGG
CGACATCAAGAACTGCGAAGAAGTGATCGTTCGCGGCTTCTTCGATGCGG
GAAACGTAGAGGCAAAGACGGTGGTTGTTGAGGCCGACGGTGAGAGAAAA
GAAAAGGCTGCTTGCTGCCGCTGAGAGAAGAGCAAGTATTCCGACGGGTT
CGAACATGTTGCATATTGCATACACATGTACAGCAGTAGAAAAAAGACAC
CCTGACGTGCTGGACGACCGGTGTCCTCGTGAAGGCTTGGTGGGCCTGCT
TGCTGGCGCGGAAGCCGGAGCAGAGTGTGCGTCGTGTCTTATCGCATGCA
GAACGGGCGAATATGCCTACTGTAGGGGGGAAGAACATAGGTTTCGACGT
TGACGAATTTCGAAAACAAACGCAACAAAAGGTCGAGAAATTGTACAACA
GACACACCCAGTCGACACACAAGACCAGTTGGGGGGCATCGCGAGAAACA
GAAATCGTTGATTCTCGCACAGGGCGGCTTTTGAGGCTGCTCAAAAATAC
ATTTCACGCGTCTACCTCCACAGGCCTCCTTTGAAAAATTCACGCTATTC
TAAATTCAAGTCAATAGAGCCGAAACGGAAGGCGCTCAAATACGGCCAGT
TTTGAGGGTTAAGGTTATGCAGTCTTTTGTCATCAGTAGAGGACACCATG
AAGAGGCGTCGTACATACGTGCTGGCACGTTCAGGTTTGCTACTGGAGCG
GAAATATCGAAGGTCGCAGCAGCCTCTGAAAACAGTCCGAAATCTGCGCC
GGAACCAAGCGGCATCCAACATTTGTCACAGCCATGCTCGCCGCCACCGA
CCCCTACATTCTCCTGAACTACGTAGCGGGTTACAGCAATAGCTGATGCC
ACTAGCTACTGCGGACACCCCTCCGTTCAGGGGTTTACGGTCCGCTCCAG
TAGCAAACTTGAACTTGCCAGCACGCGCGACGCCTCTTCATGGTGTCCCT
ACTGATGACAATAGAATGCCTATAACCTAACCCTGGCGGGAAGGTTGTTT
TCTCTATCTGTTTGGCATTAAAGTATGGAAAAGAGCCAGCGTCAAAACCC
CTGTTCTTCCCCCCCTTAACGGCACGTTCCTCCCGCATGTACCATGTGTG
GCTTATTTGCTCTTCAGTATGTACCTCGTCCAACGGACCTGTCAAAGTTC
TCTGCGGAAGAGGGAGCAGCGGTCACCCCACCGCCGCCCTTTGACTTCCA
AGACAAGATTATCAGCCAGCTGGTTTTCTTCCCACTCACTCCAACAAGCC
AAGCTATGTGCATGCCATCCCTTCGACTGCTGTGTCATTTTTCGAGCGGG
GATGGTCGTTCTCTGGCGGTGTGTGTACACTTTCTATTATAGTCTAAACA
GAGGTTCTTCAATTTCCGAATTCCCGTCCCTGACTCCGCAGGCGATGCGT
TTTTTTCGTTTCGCTCTTCGGTGGGTGTTTCGGGGACCTCCCATCTTTGA
TGTCTCCCTGTCGGGTTCCCTCTTGGTGAAGATTCCCTGCCTTTATAACA
TCATACTACCCTCCTTGCTGCCGTAGTCTAGATTTCTACGCCACCCCGGC
GAGGGCTATCGTTTCGTTTGGAGTTTGTTCTGAGTTACCCGGGGTCGAGA
TAAACGAAGTCGCTGGCGATTTCCAAGCAGAAGCCCCCCCGGCATAGACG
CGAGCGCGTGCCACCGCCCACTGCTGTAGCGCACTTGTGGGGCCGAATGC
TGCGAACATCGTTCTGACCCCCCAAGATTTGCTTCGATGCGTTGTGACGC
CACAAGCCACAAAATTAGAAGGATGGGACGAGATTTGTGTAACCCTTGTT
GCGAACAACGTTCTGGCCGTCAAGATTTGCTTCGATGCGTTGTGGCGCCA
CAAATCAAGAAGGATTGGACGAAAATTTTTGTACCCTACCCCCTCGGAGG
AACCCTTGACAAGAAGTCCGTTTTCGACAATCAATTCCACTCGGGAAACT
TCAATCTTGGGGCCGTTTTATGCGTCGGCAGGGGGATCACGGTTGTGGGC
AGGGAATTGAAAAAGGTGCCACCCCACTCTTTTTCGTTGTCGTCCAACCC
CATTTGCGCGTCGTTTCCTTTTGGACGCGTTGCTCGAGATGCGTGGCTGC
TCTAAAGCTCGTGCTGCCTCCGTATCGCGGGGAACAACGTTTGCAAGTTG
TGCTCGTGCAATGGATACAAACCGACAATCCGTTGGCCGTATGGTTTTTT
GTTCCTTTTGGTTCTTCCAGGAGTCCTTACCGGAGCGACCAAGGCCCAGA
ACGCTAAGATCGCGGGCAAGTTCGACGGCCACCTCCGCCTGTCGGAGGGA
CTTAACGTTACGAGCAGCGGCGAGGCCAAGGGGGTGAGGTTACTGCTGTA
TGCATAGTTTGCGACGGTACATGCGCAAGGCCGCGAACCACGGTATATAG
CCTGCCTGCCCGCACCGCCGTGGTCGTTTTTCTGTGCTGCTCTGCGCAAA
GCAGGTGCAAGCTGGGTGAACAATGACGTCCCTCCCCCCTTCGCTCCTCG
GTCTCCCCTTGCTTGTCTCAAAATCTGTCTCATTTTGGTGTTGTCGCAGA
CGATCCGATACCGGGGTATCCAGGTTGAGAACGGCGGGAAGCTGTTCGGG
GATATCCAGTTCGCAACAGAGGATTCTTGATTCCGGTTCGGCCGTACATG
TGAAGAGTGGCCAACATTTTATCGGAAAGCCGGAGCGAGAGCTACGGCAT
GATTAAGACTGGGTGCTGTCTCGTGCCCTGGAGGGAAGATGGTTGGGGGG
GCGGTGGGGATCCACGTAACTTGACGAATCCGTGGTAGGAGTTATTTGTA
GGATTCCCTGCACCTTTTCGTTTGGCGATCGAACCGCGCTATCGTGGTGT
TGTTAGGCAACCGCCTTCCTGGTGTCGGCCCGCCTGCGAGCTGTTTGTAT
TGTAGCGA
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Coding sequence (CDS) from alignment at chr_28:1789609..1793216-

>Ec-28_002000.1 ID=Ec-28_002000.1|Name=Ec-28_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=639bp|location=Sequence derived from alignment at chr_28:1789609..1793216- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGGATGGGGACCTGCACACACGGATCAGGCAAGAAATTATCGTTCA
GAGGCCCCGTGTTTCATTCGTTTTGGCCACCCCCATCTTTCGTTCCGCTC
TCTCTCTTGTTTTGATTCGCATTTTCGACCTTGATCAACCACACCAATTT
TGCTGCACCATCTCTCTCGGCGCCTTCCCCCCTCTTCCGCCGTCCCGTGG
ACTCACGCGTACACGTCGCACACACTCGCCCCGAGCTCTTGCAGCCATAT
CACGGTCGGTCGGTACAAGACACCTAGAAGCCTGGATCGACAAGACCATG
GCTACGCCGACAACTGCCGGACGCGTGATTATCGGCCAGGGTATCACAGT
GAAGGGCGACATCAAGAACTGCGAAGAAGTGATCGTTCGCGGCTTCTTCG
ATGCGGGAAACGTAGAGGCAAAGACGGTGGTTGTTGAGGCCGACGGAGTC
CTTACCGGAGCGACCAAGGCCCAGAACGCTAAGATCGCGGGCAAGTTCGA
CGGCCACCTCCGCCTGTCGGAGGGACTTAACGTTACGAGCAGCGGCGAGG
CCAAGGGGACGATCCGATACCGGGGTATCCAGGTTGAGAACGGCGGGAAG
CTGTTCGGGGATATCCAGTTCGCAACAGAGGATTCTTGA
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Synonyms
The feature 'Ec-28_002000.1' has the following synonyms
Synonym
Esi033_0197
Esi_033_0197