Ec-27_004880.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
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Overview
Homology
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A6H5K9S3_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9S3_9PHAE) HSP 1 Score: 343 bits (880), Expect = 1.950e-105 Identity = 207/375 (55.20%), Postives = 224/375 (59.73%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACLTWVREAVSWLCGQQRRGRASVRGGVHG--------HGEPRPAPGC*ERDGGRGGGDPVQC--RGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQTGCPSSRSTSEPCRTGTVSRGRRRS-----------------------STAWT*QCWSGVRGGAAGVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHAGGRAGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDKSPLVSV 1200
FCSYASLYHQKQMLTDHRRMQAYYSA L V L + AS V+ H A ++G G + +QC + VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQ + + +G + S+ W V G V+ ++ T DV+ GVDETNVSI LEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDV+IKHKNVLPTGEDKSPLVSV
Sbjct: 44 FCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLD-VGTGSGILALWAAKAGASKANHVYAVEFTDMANHARRLVA-----KNGMEGVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPV-VVQTFDM-----------HTCTLEDVQ----------GVDETNVSISLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSV 390
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A835YPE5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPE5_9STRA) HSP 1 Score: 248 bits (632), Expect = 3.030e-70 Identity = 163/363 (44.90%), Postives = 194/363 (53.44%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACL---TWVREAVSWLCGQQRRGRASVRGGVHGHGEPRPAPGC*ERDGG-------RGGGDPVQCRGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQTGCPSS----RSTSE------------PCRTGTVS-------RGRRRSSTAWT*QCWSGVRGGAAGVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHA---GGRAGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHK 1155
FCSYASLYHQKQMLTDHRRMQAY+ A L T W + G A V V + A E +G + + +Q GP VDIIISEWMGYFLLRESMLDS+VRARDRWL PGGLMFPS TM WGLV+DE+ + +ST E C + +G S+ W L P + + G+ A ++H +H GV+ET I +E D RVSGFAGWFTADF GTEANP P PV LST P+NGYTHWGQQVF+L+VPH V GG VEGT+A+ RQKEN+RLYDV +KH+
Sbjct: 16 FCSYASLYHQKQMLTDHRRMQAYHGAIMQNRGLFAGKRVLDVGTGSGILALWCA---KAGAAKVFA-VEYTDMAKHARKLIEANGASDIVEVIQSSVEALQLDGP-----VDIIISEWMGYFLLRESMLDSVVRARDRWLAPGGLMFPSHATMYWGLVSDEEDRLAKAAEYLQSTQEWHRFKREMRQYYDCDMNVLEGVYEEEQKGYYILSSFWA-------------ELQPDQCV------------GQGAMIKHFDMHTCTLEDVQGVEETPFRINVEHDCRVSGFAGWFTADFRGTEANPLPVPVLLSTAPDNGYTHWGQQVFYLEVPHWVPRGGAVEGTLALTRQKENIRLYDVGVKHR 344
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A7S2V4Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q5_9STRA) HSP 1 Score: 183 bits (464), Expect = 9.790e-47 Identity = 131/348 (37.64%), Postives = 168/348 (48.28%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACLTWVREAVSWLCGQQRRGRASVRGGVHGHGEPRPAPGC*ERDGGRGGGDPVQC-RGP----QAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQTGCPSSRSTSEPCRTGTVSRGRRRSSTAWT*QCWSG----------VRGGAAGVLHPVELLGGAGQGPGVGRTGRCAD--VRHAHVHAGGR---AGVDETNVSIPL-EEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHK 1155
FCSYA LYHQKQMLTDH+RM+AYYSA Q + L V L A V A E + G D V+ +G VDIIISEWMGYFLLRESM+DSL++ARDR+L P GL+FPS TM W + E+ + + + + + T + + LHP +++ C ++H +H + AGV E P + RVSGFAGWFT DF G V LSTGPE GYTHWGQQVF+L P D+ G K+ GT ++RQKEN+RLYD+++ HK
Sbjct: 53 FCSYAFLYHQKQMLTDHQRMRAYYSAVMQNKEVFQNAVVLD-VGTGSGVLAAWAAMAGAKKVYAVEFTDMATHARRLVEAN---GQADKVEVIKGSVEELDLAEKVDIIISEWMGYFLLRESMVDSLIKARDRFLKPDGLLFPSHATMYWAPICFEEERLGKQQEYIQSLQEWHNFKAETKERYGITMATLEADYEQEQRHYYINTASWSELHPDQVV--------------CPPQAIKHLDLHTCTQPEAAGVAELPFCFPCGTQPTRVSGFAGWFTTDFKGRVGRSLGSEVVLSTGPEAGYTHWGQQVFYLAQPLDLQPGDKILGTFRMERQKENIRLYDLYLTHK 382
BLAST of Ec-27_004880.2 vs. uniprot
Match: W7TTE4_9STRA (Ribosomal L11 methyltransferase, PrmA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE4_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.760e-40 Identity = 132/367 (35.97%), Postives = 167/367 (45.50%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACL-----TWVREAVSWLCGQQR-----------RGRASV-RGGVHGHGEPRPAPGC*ERDGGRGGGDPVQCRGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVP-GGLMFPSRCTMMWGLVNDE-----------------QTGCPSSRSTSEPCRTGTVSRGRRRSSTAWT*QC-WSGVRGGAAGVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHAGGRAGVDETNVSIPL-----EEDARVSGFAGWFTADFHGTEAN--PCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHI 1146
FCSYA LYHQKQMLTDHRRM AY+ A S + + T V S G +R R V + GV E + +G + ++ P + VDII+SEWMGYFLLRESMLDSLVR R+++L GG MFPS TM W L+ DE QT ++ + G ++ + W+ +R V PV + R D++ GV ET + E VSGFAGWFT DF G P P P TLST P+ GYTHWGQQVFH+ V ++ G VEGT+ + RQ EN RLY V +
Sbjct: 57 FCSYAYLYHQKQMLTDHRRMFAYHEAIMKNSSVFEGKTVVDVGTGTGVLAVWSAKAGAKRVVAVEYTDMAKMARVIVAQNGVDAIVEVQ-----------QGSAEEMEEVEPGS---VDIIVSEWMGYFLLRESMLDSLVRVREKYLKKEGGHMFPSHATMYWALIEDERERQVKEQEYQQALEDWQTFSHQTKEFYDLDMAGLTAQYEEEQKEYYLLSSSWAELRAEQV-VAEPVVI--------------RRLDLKSCTFEE--IKGVPETPFQFVIPPNDNNEPVYVSGFAGWFTTDFFGNAPGIEPLPHPTTLSTAPDVGYTHWGQQVFHVVVGLELFPGDVVEGTVTLVRQVENARLYHVEV 392
BLAST of Ec-27_004880.2 vs. uniprot
Match: C1FF22_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF22_MICCC) HSP 1 Score: 153 bits (387), Expect = 6.440e-37 Identity = 129/367 (35.15%), Postives = 166/367 (45.23%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACL---TWVREAVSWL--CGQQRRGRASVRGGVHGHGEPRPAPGC*ERDGGRGGGDPV--------QCRGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQTGCPSSRSTS--EPCR--------------------TGTVSRGRRR---SSTAWT*QCWSGVRGGAAGV----LHPVELLGGAGQGPGVGRTGRCADVRHAHVHAGGRAGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPE-NGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHI 1146
FC+Y LYHQK ML D +RM AY+ A R P+ + L T W CG ++ V+ A + G GD V + P+ VD+IISEWMGYFLLRESM DS++ ARDRWL PGG MFPS TM + +TG S + + CR T T +R +++AW S V G A + LH V L D+++ V R + ET S P E V FAGWF F G+EANPC V L+T P+ NG THWGQQ F+L G +EG + ++R+KEN RLYDV +
Sbjct: 15 FCTYGYLYHQKDMLEDQQRMTAYHDAVRLNPALFRGKTVLDVGTGSGILAIWAAQCGARK---------VYAVEATYMATHAKKLVEANGLGDVVTIIQSTVEEVELPEQ---VDVIISEWMGYFLLRESMFDSVIVARDRWLKPGGAMFPSHATMSIAPI---RTGVNSQKHAEYEDSCRGWDEFVDDTKDHYGVDMSALTETFDAEQREFFLNTSAWVDIHPSQVLGKACVICDWDLHKVTL----------------EDIKNLDVPFELR--IHETGASGPSE----VGAFAGWFDVSFRGSEANPCENVVDLTTAPDANGATHWGQQAFYLSPGISAADGAHLEGRLEMQRKKENQRLYDVRL 344
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A482SBI8_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI8_9ARCH) HSP 1 Score: 150 bits (380), Expect = 5.890e-36 Identity = 125/373 (33.51%), Postives = 161/373 (43.16%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACLTWVREAVSWLCGQQRRGRASVRGGVHGHGEPRPAPGC*ERDGGRGGGDPVQCRGP--------------QAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVN-DEQTGCPSSRSTSEP-------------------CRTGTVSRGRRRS---STAWT*QCWSGVRGGAAGVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHAGGRAGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDK 1182
FCSYA LYHQKQML DH RM+AY+S+ + L + + G A V C D V+ G Q VDIIISEWMGY LLRESMLDS++RAR+RWL P G MFPS TM ++ ++ C TS T T + + S WT V G ++ ++L T D GVD I + +A VSGFAGWFT DF+G+ +P V LSTGPE G THWGQQVF+L+ D G + G +A+ RQ++N RLY++ + V GE+K
Sbjct: 30 FCSYAYLYHQKQMLMDHVRMRAYHSSIMLNKDKFRGKVVLDVGTGSGILSIWAAQAGAAKVYA-------------CEYTDMANHARKLVEANGLSHIVEVIQSSVEDLQLPGQVDIIISEWMGYILLRESMLDSVIRARNRWLKPDGAMFPSHATMYLSAISYEDDRQCKIDEFTSSMRDWKVFSEEMKHYYNVDVGALTNTFHKEQEEYYVYSGLWTELKTEHVVGQPV-IIKKLDL-----------NTCTLKDAE----------GVDTVPYDIEIPFNATVSGFAGWFTVDFNGSVPSPVNKRVVLSTGPEAGNTHWGQQVFYLKEAVDCTPGTHLHGKVAMVRQEKNKRLYNL-VLDVQVDQEGENK 366
BLAST of Ec-27_004880.2 vs. uniprot
Match: D7FL25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL25_ECTSI) HSP 1 Score: 152 bits (385), Expect = 1.830e-35 Identity = 128/369 (34.69%), Postives = 167/369 (45.26%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACLTWVREAVSWLCGQQRRGRASVRGGVHGHGEPRPAPGC*ERDGGRGGGDPVQ-----CRGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDE----------QTGCPSSRSTSEPC--RTGTVSRGRRRSSTAWT*QC---------WSGVRGGAAGVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHAGGRAGVDETNVSIPLEEDAR-VSGFAGWFTADFHGTEA-NPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDKSPLVS 1197
F SYA L HQKQML D RRM+AY ++ + L V L + A V + A E++ G GD +Q Q VD+I+SEWMGYFLLRESMLDS+V ARD+WL G+MFPS TM+W V+D Q + SE R G G + A+ +C W + G V PV + + D+ + G+ +T S PL + A V+GFAGWF F G + P PV ST P GYTHWGQQVF+LQ P VEGT+++ RQ N RLY+V ++H+ +G S VS
Sbjct: 164 FYSYAELEHQKQMLEDDRRMEAYRNSMLLNRDAFEGKTVLD-VGSGSGVLAIFAAQAGAKKVYAVEYTDMAKHARTMVEKN---GFGDVIQVIQGSAESIQLPEKVDVIVSEWMGYFLLRESMLDSVVVARDKWLKDTGVMFPSHATMVWAPVDDGDQKYRRDTDYQNSLSGWSTFSEHAMQRYGVDMSGLDK---AYEEECAGVFSLSSLWRELAGHQV-VSEPVTV--------------KELDLHTCSLED--TKGLAKTLFSFPLRDGAPPVTGFAGWFDVSFRGRDGVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDATVEGTVSMVRQANNPRLYNVKVEHRLSFASGTTDSQQVS 508
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A7S2JSG2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSG2_9STRA) HSP 1 Score: 148 bits (374), Expect = 9.700e-35 Identity = 128/389 (32.90%), Postives = 168/389 (43.19%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACL----------TWVREA-------VSWLCGQQRRGRAS-----------VRGGVHGHGEPRPAPGC*ERDGGRGGGDPVQCRGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPG-GLMFPSRCTMMWGLVNDEQTGCPSSRSTSEPCRTGTVSRGRRRSSTAWT*QC------------------WSGVRGGAA-GVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHAG-GRAGVDETN-----VSIPLEEDARVSGFAGWFTADF------HGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVE--GTIAVKRQKENVRLYDVHIKHK 1155
FCSYA LYHQKQML DH RM AY+SA + + W +A V + + + +RG V PR D G + QC VDII+SEWMGYFLLRESMLDSL+RARD++L P GLMFPS CTM + DE+ S + + + +S+ C W+ ++ A PV++L D+ + G A DE + +S ++ A +SGFAGWFT+DF +G +A P L TGPE GYTHWGQQVFHL V+ KV G + + R KEN RLY+ + K
Sbjct: 35 FCSYAQLYHQKQMLVDHVRMAAYHSAIMGNSLVFKDKVVMDVGTGSGILAVWAAKAGAKRVYAVEYTEMSKHAEKVMEANGVSDVVTVIRGAVEDVVLPR-------EDFATDGENDTQC--------VDIIVSEWMGYFLLRESMLDSLIRARDKFLKPRTGLMFPSHCTMYVAPITDEEERYQSCAEYANTMQDWSQFVETTKSTYGVDMSCLEAPFDREQNEYYLLSSKWAELKPNAILAEAQPVKML----------------DMITCTIEESRGLALFDELSSFDFDISDDYKDGAPISGFAGWFTSDFKSRTDANGADAPKLMSPAFLDTGPEAGYTHWGQQVFHLLSSIPVLPDQKVRIYGNLELMRTKENARLYNCRFRFK 392
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A812S7V0_SYMMI (PRMT10 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7V0_SYMMI) HSP 1 Score: 145 bits (365), Expect = 2.180e-34 Identity = 92/247 (37.25%), Postives = 123/247 (49.80%), Query Frame = 1
Query: 475 VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQTGCPSSRSTSEPCRTGTVSRGRRRS-----------------------STAWT*QCWSGVRGGAAGVLHPVELLGGAGQGPGVGRTGRCADVRHAHVHAGGRAGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHI 1146
VDIIISEWMGYFLLRESMLDS++RAR++W+ PGG MFPS TM+ G +++EQ S+ + + + S+ WT V G V+ ++L T D GV T + R SGFAGWFT DF G+ NP VTLSTGPE GYTHWGQQVF+ + + V G + GT+++ RQ++N RLY++ +
Sbjct: 89 VDIIISEWMGYFLLRESMLDSVIRARNKWMKPGGSMFPSTATMLLGCISNEQDREGKFDDYSQSMHEWHMFKQEMQEFYQVDMNILEPKFTKEQEDYYIYSSLWTELSQEHVIGQPV-VVKRLDL-----------NTCALEDA----------LGVAPTEYRFDVPYPVRASGFAGWFTVDFAGSVENPAEKRVTLSTGPEMGYTHWGQQVFYWKEAVNCVPGTVISGTMSLVRQEKNKRLYNMEV 313
BLAST of Ec-27_004880.2 vs. uniprot
Match: A0A6U5M0R9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5M0R9_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.790e-34 Identity = 140/420 (33.33%), Postives = 178/420 (42.38%), Query Frame = 1
Query: 175 FCSYASLYHQKQMLTDHRRMQAYYSASRTTPSCLQASACL----------TWVREA-------VSWLCGQQRRGRASVRGGVHGHG-----------EPRPAPGC*ERDGGRGGGDPVQCRGPQAGR*VDIIISEWMGYFLLRESMLDSLVRARDRWLVPG-GLMFPSRCTMMWGLVNDEQTGCPSSRSTSEPCRTGTVSRGRRRSSTAW-----T*QCWSGVRGGAAGVLHPVE-----LLGGAGQGPGVGRTGRCADVRHAHV-------------------------HAGGRA------GVDETNVSIPLE----EDARVSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVHIKHKNVLP-TGEDKS 1185
FCSYA LYHQKQMLTDH+RM+AYY A + + W A V + R GV GH +P+ GG + ++C +DIIISEWMGYFLLRESMLDSL+RARD++L GLMFPS TM + V DE+ R TS T ++ T W + + GV GA E LL + R ++R V A G + G D+ S L A VSGF+GWFTADF G+ A P LSTGPENGYTHWGQQVFHL V+ G +++G + + R K+N RLY+ ++ TGE K+
Sbjct: 60 FCSYAQLYHQKQMLTDHKRMEAYYDAIMGNADVFRDKVVMDVGTGSGILAVWAAHAGARRVYAVEYTDMANHARRLVEENGV-GHVVTVIQGAVEDIDPQSL---------EGGKEAMECNDGC----IDIIISEWMGYFLLRESMLDSLIRARDKFLKKNTGLMFPSHTTMYFAPVMDEEE-----RKTSVKEYTSSM--------TDWNDFVESTKTMYGVDMGALDSAFQREQKEYYLL-----------SSRWCELRMEQVLAEPCMVKYLDMCTCTLEESRGILRGAPGSSFDFDVVGEDDDTASSSLNPMPARHAVVSGFSGWFTADFKSRTDADGSMAPKISHPTLLSTGPENGYTHWGQQVFHLLSNIPVIRGQTTRIKGELELARNKDNARLYNCRVRFSTTRRRTGEPKA 441 The following BLAST results are available for this feature:
BLAST of Ec-27_004880.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-27_004880.2 ID=Ec-27_004880.2|Name=Ec-27_004880.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=108bpback to top spliced messenger RNA >Ec-27_004880.2 ID=Ec-27_004880.2|Name=Ec-27_004880.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2993bp|location=Sequence derived from alignment at chr_27:4354137..4364632+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. GGCCACATCAACAGCCGGCTTCCCACAATAGTCCGCCACGCAGCATCATGback to top protein sequence of Ec-27_004880.2 >Ec-27_004880.2 ID=Ec-27_004880.2|Name=Ec-27_004880.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=108bp MRRTCPSRWRKTPGSPGSRDGSRQTSTVRKPTRALARSPSPPARRTVTRTback to top mRNA from alignment at chr_27:4354137..4364632+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-27_004880.2 ID=Ec-27_004880.2|Name=Ec-27_004880.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10496bp|location=Sequence derived from alignment at chr_27:4354137..4364632+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_27:4354137..4364632+ >Ec-27_004880.2 ID=Ec-27_004880.2|Name=Ec-27_004880.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=324bp|location=Sequence derived from alignment at chr_27:4354137..4364632+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-27_004880.2' has the following synonyms
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