|
Homology
BLAST of Ec-00_007160.3 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI) HSP 1 Score: 745 bits (1923), Expect = 8.830e-251 Identity = 603/607 (99.34%), Postives = 604/607 (99.51%), Query Frame = 1
Query: 1 MQGSSSDDNGMAAHGGAAGGAGAGLLAAHRPQSDSAGEHSEDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGRPGVHPVFQQTMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWESHGVPVGGXXXXXXXXXVVGMPEQTLVDAIEGLNLVVPADAAGSATRRLXXXXXXXXXXXXXXXXXXXXXXXXRMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALKGGGXXXXXXXXXXXXXXXXXXXPRESAMESVAXXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEARLXXXXXXXXXXXXXXXXMAVEDTASVSEGEAVAALASSLSLSPRREPAGETATTPAVTAAGSDAGAPPTAGSLETRGAAEEGGNDGAAGAGFALLLQQADLAAM 1821
MQGSSSDDNGMAAHGGAAGGAGAGLLAAHRPQSDSAGEHSEDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGRPGVHPVFQQTMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWESHGVPVGGXXXXXXXXXVVGMPEQTLVDAIEGLNLVVPADAAGSATRRLXXXXXXXXXXXXXXXXXXXXXXXXRMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALKGGGXXXXXXXXXXXXXXXXXXXPRESAMESVAXXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEARLXXXXXXXXXXXXXXXXMAVEDTASVSEGEAVAALASSLSLSPRREPAGETATTPAVTAAGSDAGAPPTAGSLETRGAAEEGGNDGAAGAGFALLLQQ D A +
Sbjct: 1 MQGSSSDDNGMAAHGGAAGGAGAGLLAAHRPQSDSAGEHSEDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGRPGVHPVFQQTMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWESHGVPVGGXXXXXXXXXVVGMPEQTLVDAIEGLNLVVPADAAGSATRRLXXXXXXXXXXXXXXXXXXXXXXXXRMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALKGGGXXXXXXXXXXXXXXXXXXXPRESAMESVAXXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEARLXXXXXXXXXXXXXXXXMAVEDTASVSEGEAVAALASSLSLSPRREPAGETATTPAVTAAGSDAGAPPTAGSLETRGAAEEGGNDGAAGAGFALLLQQEDQAEL 607
BLAST of Ec-00_007160.3 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE) HSP 1 Score: 355 bits (910), Expect = 1.380e-102 Identity = 220/246 (89.43%), Postives = 223/246 (90.65%), Query Frame = 1
Query: 283 GRPGVHPVFQQTMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWESHGVPVGGXXXXXXXXXVVGMPEQTLVDAIE 1020
GRPGV PVFQQ MDAGA EGWIARGATAEQLS+WGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESD+ALNQMLRS+TPQGAGGAGAPPLVRVVRGTGG DTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXX GGRQQSVLGMLPNERLIW GXXXXXXXXXVVGMPEQTLVDAIE
Sbjct: 2144 GRPGVPPVFQQAMDAGAXXXIGLGGGGGEGWIARGATAEQLSMWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDSALNQMLRSLTPQGAGGAGAPPLVRVVRGTGGGDTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXX-GGRQQSVLGMLPNERLIW--------GXXXXXXXXXVVGMPEQTLVDAIE 2380
BLAST of Ec-00_007160.3 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE) HSP 1 Score: 143 bits (360), Expect = 7.800e-32 Identity = 227/402 (56.47%), Postives = 236/402 (58.71%), Query Frame = 1
Query: 1012 AIEGLNLVVPADAAGSATRRLXXXXXXXXXXXXXXXXXXXXXXXXRMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALKGGGXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------PRESAMESVAXXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEARLXXXXXXXXXXXXXXXXMAVEDTASVSEGEAVAALASSLSLSPRREPAGETATTPAVTAAGSDAGAPPTAGSLETRGAAEEGGNDGAAGAGFALLLQQADLAAMRRENRGESGRAGEGGVAPAAXXXXXXXXXXXXXXXXXXXXXX------GAAVRDEESPEAAPRG 1995
A++GLNLVVPADAAG ATRRL XXXXXXXXXXXXXXXXXXXXXXRM N GRWTDNGQPL LAEGRTV+PML Q +QA A LLPSHAL GG XXXXXXXXXXXXXXXXXXX P + A+ + VAA V XXXXXXX XXXXXXXXXXXXXXXX VEDTASVSEGEAVAALASSLSLSPRRE APPTAGSLETR AE GGNDGAAGAGFALLLQQADLAAM+RENR XXXXXXXXXXXXXXXXXXXXXX GAAVRD E+PEAAPRG
Sbjct: 9 ALQGLNLVVPADAAGPATRRLMQXXXXXXXXXXXXXXXXXXXXXXRMANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVARLLPSHALDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSANTPSDGAVGTRGGGGDIGGDAGAARDNVAAM--VESAMESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDTASVSEGEAVAALASSLSLSPRREXXXXXXXXXXXXXXXXXXXAPPTAGSLETRRGAEGGGNDGAAGAGFALLLQQADLAAMQRENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGDGAAVRDGEAPEAAPRG 408
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 750.7 |
Seed ortholog evalue | 5.8e-214 |
Seed eggNOG ortholog | 2880.D7G3W3 |
Preferred name | UPL1 |
Length | 2053 |
KEGG ko | ko:K10592 |
KEGG Pathway | ko04120,map04120 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-00_007160.3 |
GOs | GO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005911,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009506,GO:0009987,GO:0016020,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0030054,GO:0032446,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0055044,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1902494,GO:1990234 |
EggNOG free text desc. | ubiquitin protein ligase activity |
EggNOG OGs | COG5021@1,KOG0939@2759 |
EC | 2.3.2.26 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko04121 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_007160.3 ID=Ec-00_007160.3|Name=Ec-00_007160.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=684bp MQGSSSDDNGMAAHGGAAGGAGAGLLAAHRPQSDSAGEHSEDRSDSEDDG DSDDDDSDGDSDDEEEDDSDDGDDDDGHGGHEAEMGGQGVDGEEGRPGVH PVFQQTMDAGAAAGIGLGGGGGEGWIARGATAEQLSLWGVQPPPGLARQY ATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVV RGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVH PLLLRHVRAPGSTGSGGRSSGRGGRGNRGGGGNGGGGGAAGGRQQSVLGM LPNERLIWESHGVPVGGGAGGGGGGGVVGMPEQTLVDAIEGLNLVVPADA AGSATRRLMQGGATVVPPPPPGGVFAAGGGGGRMPNGGRWTDNGQPLPLA EGRTVIPMLAQGDQAFFALLLPSHALKGGGGGEAGAAAPRPGAGAGAGGP RESAMESVAAAEAAAAAAAAAEAEVAAAEAVVEVAAAEVAAAEARARVAG EARLAARAARAARAAAATTAMAVEDTASVSEGEAVAALASSLSLSPRREP AGETATTPAVTAAGSDAGAPPTAGSLETRGAAEEGGNDGAAGAGFALLLQ QADLAAMRRENRGESGRAGEGGVAPAAAAVATTTATGAGAATTATGTGDG AAVRDEESPEAAPRGAEEAAGAGADRVDDAMDVX back to topspliced messenger RNA >Ec-00_007160.3 ID=Ec-00_007160.3|Name=Ec-00_007160.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2053bp|location=Sequence derived from alignment at chr_00:11273247..11282295- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGGGCTCCTCTTCTGACGACAACGGGATGGCTGCGCACGGCGGCGC CGCCGGTGGCGCCGGCGCCGGCCTATTGGCCGCCCACCGGCCGCAGTCCG ACTCCGCGGGAGAACATTCCGAGGACCGTTCCGACTCGGAGGATGATGGC GACTCGGATGACGACGATTCAGACGGGGATTCGGATGACGAGGAGGAGGA TGATTCCGACGATGGCGATGATGATGACGGGCATGGCGGGCACGAGGCAG AGATGGGCGGGCAGGGGGTGGACGGGGAAGAAGGGCGCCCCGGGGTACAT CCGGTGTTTCAGCAGACCATGGACGCCGGCGCCGCGGCTGGCATCGGGTT GGGAGGGGGTGGCGGGGAAGGGTGGATTGCTCGAGGGGCTACGGCGGAGC AGCTGTCTCTGTGGGGGGTGCAGCCGCCGCCGGGCCTCGCGAGACAGTAC GCGACGCGGCACGGGGAGCGTGGGGGAGGAATGAACATGATGACCATGAA CGACTTCATGGAGAGCGACGCCGCTCTGAACCAGATGCTTCGCTCCGTCA CTCCCCAAGGCGCGGGCGGCGCCGGCGCCCCTCCCCTCGTCCGCGTTGTT CGCGGGACCGGCGGGGCAGACACGGGTTGGACTGAGATGATCGCACATGA CCTTCATGCGGCAGCGCCAGGGCCTTCCCACAACACCACCAGACTCTTCC CGGACGGCCCGTCGGCGGCCACCCAGGCGCACGCCGCCCCCGTCGTGCAC CCGCTCCTCCTGAGGCACGTCAGGGCGCCGGGCAGCACGGGCAGCGGCGG TAGGAGCAGCGGCCGGGGCGGCCGGGGCAACCGGGGGGGCGGCGGTAACG GCGGCGGCGGCGGCGCGGCCGGTGGTCGGCAGCAGTCGGTGCTCGGAATG CTGCCGAACGAGCGGCTGATCTGGGAGAGCCACGGGGTACCGGTGGGGGG TGGCGCTGGCGGCGGCGGCGGCGGCGGGGTGGTTGGTATGCCGGAGCAAA CTCTTGTGGACGCCATCGAGGGTCTCAACCTGGTGGTCCCCGCCGATGCC GCCGGCTCCGCCACCCGCCGCCTGATGCAGGGCGGGGCGACCGTGGTGCC CCCCCCGCCACCCGGGGGCGTTTTCGCGGCGGGTGGCGGCGGCGGGCGAA TGCCCAACGGGGGGCGTTGGACCGACAACGGGCAGCCGCTCCCCCTGGCG GAGGGGAGGACGGTGATCCCGATGTTGGCCCAAGGGGACCAGGCGTTTTT CGCCCTTTTGCTCCCTTCCCACGCGCTGAAAGGCGGCGGCGGCGGAGAGG CTGGGGCTGCCGCGCCCCGCCCGGGGGCGGGAGCGGGAGCTGGTGGCCCT AGAGAGAGCGCGATGGAGTCGGTGGCGGCGGCGGAGGCGGCGGCGGCGGC GGCGGCGGCGGCGGAGGCGGAGGTGGCGGCGGCGGAGGCGGTGGTGGAGG TGGCGGCGGCGGAGGTGGCGGCGGCGGAGGCGAGAGCGAGGGTTGCAGGC GAAGCAAGGCTTGCGGCGAGGGCGGCGAGGGCGGCGAGGGCGGCGGCGGC GACGACGGCTATGGCTGTGGAGGACACGGCTTCAGTCTCCGAAGGAGAAG CGGTTGCCGCCCTGGCCTCCTCGTTGTCGTTGTCCCCCCGCCGCGAGCCG GCCGGGGAAACGGCAACGACTCCGGCGGTGACGGCAGCAGGTAGCGACGC CGGAGCCCCGCCCACCGCCGGTTCACTGGAGACTCGGGGGGCGGCGGAGG AGGGCGGCAACGACGGCGCCGCCGGCGCTGGCTTTGCCCTCCTGCTCCAA CAGGCAGACCTTGCGGCGATGCGGCGGGAGAACCGCGGGGAGTCGGGTAG GGCCGGCGAAGGTGGTGTCGCCCCCGCCGCTGCTGCGGTGGCGACGACGA CGGCGACCGGTGCTGGTGCTGCTACTACTGCTACCGGCACGGGAGACGGG GCCGCCGTGCGGGACGAAGAGTCACCGGAGGCAGCACCTCGAGGTGCCGA AGAAGCCGCCGGCGCCGGCGCGGACCGTGTTGACGATGCCATGGACGTGG ANN back to topprotein sequence of Ec-00_007160.3 >Ec-00_007160.3 ID=Ec-00_007160.3|Name=Ec-00_007160.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=684bp
MQGSSSDDNGMAAHGGAAGGAGAGLLAAHRPQSDSAGEHSEDRSDSEDDG DSDDDDSDGDSDDEEEDDSDDGDDDDGHGGHEAEMGGQGVDGEEGRPGVH PVFQQTMDAGAAAGIGLGGGGGEGWIARGATAEQLSLWGVQPPPGLARQY ATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVV RGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVH PLLLRHVRAPGSTGSGGRSSGRGGRGNRGGGGNGGGGGAAGGRQQSVLGM LPNERLIWESHGVPVGGGAGGGGGGGVVGMPEQTLVDAIEGLNLVVPADA AGSATRRLMQGGATVVPPPPPGGVFAAGGGGGRMPNGGRWTDNGQPLPLA EGRTVIPMLAQGDQAFFALLLPSHALKGGGGGEAGAAAPRPGAGAGAGGP RESAMESVAAAEAAAAAAAAAEAEVAAAEAVVEVAAAEVAAAEARARVAG EARLAARAARAARAAAATTAMAVEDTASVSEGEAVAALASSLSLSPRREP AGETATTPAVTAAGSDAGAPPTAGSLETRGAAEEGGNDGAAGAGFALLLQ QADLAAMRRENRGESGRAGEGGVAPAAAAVATTTATGAGAATTATGTGDG AAVRDEESPEAAPRGAEEAAGAGADRVDDAMDVX back to topmRNA from alignment at chr_00:11273247..11282295- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-00_007160.3 ID=Ec-00_007160.3|Name=Ec-00_007160.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9049bp|location=Sequence derived from alignment at chr_00:11273247..11282295- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGCAGGGCTCCTCTTCTGACGACAACGGGATGGCTGCGCACGGCGGCGC
CGCCGGTGGCGCCGGCGCCGGCCTATTGGCCGCCCACCGGCCGCAGTCCG
ACTCCGCGGGAGAACATTCCGAGGACCGTTCCGACTCGGAGGATGATGGC
GACTCGGATGACGACGATTCAGACGGGGATTCGGATGACGAGGAGGAGGA
TGATTCCGACGATGGCGATGATGATGACGGGCATGGCGGGCACGAGGCAG
AGATGGGCGGGCAGGGGGTGGACGGGGAAGAAGGTGTGCTAACTAGCGGC
CTTGTTTTTTTTTTGCCGTAGTGGTGTGGTTCCACACCGCGCGTCTGGAT
GTGCTAGGGGGCGGGGGCGGGGGGGGGGCGGGCGTACCCATGCTTGGCAT
ATCTTAGCCCGTTGTGAAGTAGTTGTTTTGTTTCCCTGCTGCACACTTGT
TGAGCTGGTGTGTGTGTGGTCATGCTCATGCCTTGTTACTCTTGGTATCG
TTGTTCCTCCGACACCGTTGCAATTCCCTCCGCGAGAAGACGTGATGGAC
GAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGACGACGACGAGGAGGGGGA
CGAGGAAGAGCTGGACGAAGAGGAGATCGATCTGGACGACTTCGACGGCG
GCGGGGACGGCGATGACGACGGGCACCGAGACGAGGAGGACATGTACGTC
CTAGGGTGAGTCCGACCCGACCTGGCGGGAGAGAGAGAGGGAGGGAAGCA
GGGGGCGGGGGAGGGAGAGAGGGAGGCAAGGAAAAGCAAGGGCGTACCAT
GTTTTGATGATACAGGCGTTTTTTGTTTTTTTTTTGCGTGCCACAAAAAA
GTTCATGGGAGAGTCTGGGAGGGCGAGGGAAGGCAAGCGCGTACACCATG
TTTTGCCGACTTTATGATAGAGGCGGCTTTATTTTTTTGTTCTTTTTTTT
TTTTACGTGCCGCTTCAGCACCCTTGTCGCATTCAGCTCACTTCGACCTG
GCGACCCTCTGTTCTGTTCCCTCGTCCTCCCCCTTGCCAACCTTGGCCCC
GTTCCCTCGAAACTCTTGGCTGCCACATTCCATATTATGTATCCCCCTTC
CCCTGTCTTTATCGCCCTCACCAGCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCGAGGAGGACTAGGAGTAGGAAGAGGAGGAAGACGACGACGAAGAGGA
CGACGAGGAAGAGCTGGACGAAGAGGAGATAGATATGGACTACTTCGACC
TCTCCCTGCACCGCCCTGACGACCCGCAGGGCGCCCCGGGGTACATCCGG
TGTTTCAGCAGACCATGGACGCCGGCGCCGCGGCTGGCATCGGGTTGGGA
GGGGGTGGCGGGGAAGGGTGGATTGCTCGAGGGGCTACGGCGGAGCAGCT
GTCTCTGTGGGGGGTGCAGCCGCCGCCGGGCCTCGCGAGACAGTACGCGA
CGCGGCACGGGGAGCGTGGGGGAGGAATGGTGGGTCTCTTCTTTTTTTTT
CTTTTTTTTTTTGGCGAACGTTGCCGGTTTCGTGTTTTTGTTCCGAGGGG
AGCGCGGGGAGGGGATGGTCGGTTTGGTTTGGTTATGTTGTATTATTTTT
GTCGATTTTTGAGAGGTTTCGTGTAGTGTGTGTGTTGTTTGCAACGCGAC
CGCGCTAACCGGCTGACCAATGAAAATGTTGCCAGTCTCAGGGCGTGTGC
GTGGCCTGTGCGTGCTTTGTTTGTGTGGCTGTTAGCGTGGGTTTTGGATT
CCGAGATCTCAGTGTCCCTACCCATTACATGTTCCTGGTCGTGGTTTGAT
GTCTCTGCCCTGGGTTGTGTAGGATATTCCACACACACACAACACACACA
AGTGTATGGCATTTAGAAGTGTTTTGTGTTTTCAACCGCACTGAGACTGA
CGTCTTTTCATTGGTCAGCCGGTCAGCGCGGTCGATGCTAATAATAAAAA
CACACACGTTAATCCGAAGAGTAGAGTAGACTCCCCCATGACGCTCGGTC
ACAGGGTCCCAGATCGTGGCCTTAGAATCATGTTGTGTTTTCCACCGCAC
TAACTATCTTGAGACTGACATATTTTCATTGGTCAGCCGGTCAGCGCGGT
CGATGCGAACGGTAAAGACACACACACACACCCCTGTTCTTTGCTTGTAC
CAGCAGAACATGATGACCATGAACGACTTCATGGAGAGCGACGCCGCTCT
GAACCAGATGCTTCGCTCCGTCACTCCCCAAGGCGCGGGCGGCGCCGGCG
CCCCTCCCCTCGTCCGCGTTGTTCGCGGGACCGGCGGGGCAGACACGGGT
TGGACTGAGGTAGGACGAGTAAACAATTTTAAATAGAAGGTGTTGGTTGT
TGTTGTTGTTGATGTTGTCTTCACGCCAAAAGCCGCCCCGATCTCTCTAC
CCAGTACCTTCATATTTGTTCAGTAGTGGTACTGGTATGTCGGGGTCCCG
AGTTGTTGTTGTCTTCACATTAAGATCCGCCCCGATCTCTCTACCGTACC
TTCGTCTATGTTCAGTAGTGGTACCGATATGTCGGGGTCCCGAATAGCGT
GGTTCCCGATAAAATCGCGGTAAGAAAATCCTTGACGCAACAACTTGCGT
ATGCATAGTCTTCTACTAAATTCGTGTTCAGAGACCTGAGCGCGGGTTCG
TATAAAACACGGTAATTCTCGCCGATCACTGTATGCATATCCGGACCTCC
ACTGTATGGGTGGACAGGAGGCGTGTTTCTCGCGTCTGGTCTCTGGTAGG
TACGGGCGACCGGCCCACGACGTGATGGAGCGCGCTCGGATGTATGTTTT
GGGAGGAGGCCGTGGTGGTTGGGAAGAGAGGGGCATGCTGATGTCGCCGC
AAGGGGTTTGGAGGAGGCCGTAGGGGTTGGGTGGTTGGGAAGAGAAGAGC
AGGCTGATGTTGTCGCAAGGGGGGTTGGTTTGTGCTACGGCGGGGATGTC
GATCCACTTCACCCTTCTCACATGTTCGTCGTGCATGCCCGGCCGCCTTT
TCACCTCTGCTCATCTGTCTTTCTCTGTGTCTCTCGGCTTCGGTCCAAAG
CAGATGATCGCACATGACCTTCATGCGGCAGCGCCAGGGCCTTCCCACAA
CACCACCAGGTGGGAAAGCCAGTGTCAACAGCGGGTCTGGCTTTGGGTGA
ACGGCTGGAGGGATGTTTAACCGGTAGCGTTCCTTGACCGCCGGCCTTCG
TGCCCTCTCTTCCCTCGTTCGTTCGTTCATTCACGCATAGACAAATCTGG
AAGTAGCCTCCACCCTCCCAACCGTCCCGCACACGCAAGACTGGTATCTA
TTCCGTGACTAGCCAGCTAGGTGGCGCTGTGGATACCATTTAAGAAAAGG
CACAGAGAGACAGGCAGCGAGAGAGAAGAGAGATTAACTCGATGGCATTT
CATTGGTCCGTCTGGTTAACACGGTCCGACGCTATCTAAGGAGCGGTGGT
ACGAGTATAGTCTTTCCGTGATCGTATTCCAGTATATATGTCTAACGCAG
CCAACCCCCACGTTGCCCTTACCCTCAACCCCGCCGCCGCCGCCCCTGCC
CCTCCCCCTACACATCGTTGTTGTTATCGGCAGACTCTTCCCGGACGGCC
CGTCGGCGGCCACCCAGGCGCACGCCGCCCCCGTCGTGCACCCGCTCCTC
CTGAGGCACGTCAGGGCGCCGGGCAGCACGGGCAGCGGCGGTAGGAGCAG
CGGCCGGGGCGGCCGGGGCAACCGGGGGGGCGGCGGTAACGGCGGCGGCG
GCGGCGCGGCCGGTGGTCGGCAGCAGTCGGTGCTCGGAATGCTGCCGAAC
GAGCGGCTGATCTGGGAGAGCCACGGGGTACCGGTGGGGGGTGGCGCTGG
CGGCGGCGGCGGCGGCGGGGTGGTTGGTATGCCGGAGCAAACTCTTGTGG
ACGCCATCGAGGTGTGTGTACGCGCGTGTATGTTTGTGCCTGTGTGTTCG
TTCGTTCGTTTGTTCCTTTGATTGTATGTATCGTTGACCTCCGTGCTTAC
CGGCTGGCCAATGAAAGGACTCGTGCCTCAGTGCGGTTGAAAACAGAAAA
TGCTTCTGCAGGTCATGATGTGGGGGCTCCGTGAGGGTGTGCGTCATGGG
GCAGGGCTAAGCTACTCTCCGGATTAAAGATAGACACGGGAGTAACAGGG
GAGATATGCAGTGTGTTTTGTTTGTCTAGTTGGCATCGACGGTAGGCTTT
TTTATCTTTTTTTTTATTTTTTGTGCCCAGAAACCCAACAGTCACGGACA
CGATAGGTTCGCTTCCCAGCAACAAAATAAACAAGTCCCCAACTTTTTCA
AGTCTTGGAGGAGAGCTTGTCTGCTTCAGCCAAATCCCCCTCGCCCACCC
TAGCAGGGCGCGCCCGCCGCTGTATCTTGTGATCGTGTCCTCAAAACGTC
AAGTTTTCCAATTTTTGAGAGCATGCCTGTTTCAGCCAGTCGCACCCCCA
CCCCCCCCCCTGCCCCATGAACCCCCTAATTTCTCCAAAACATANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCCC
CGGATGGTTTTTTTCCCCCGCAAAAAAAAAAAAATGCCCCAAATTTTTAA
ATTTTTGGGGGGGGGATTTTTTCTTTTTACAAAAACCCCTCTCCCCCCCC
TTGCAGGGGGGCCCCCGCCGGTTTTTTGGGGTTTGGGTCCCAAAAAGGGT
AAATTTTCCCATTTTTGGGGGCCTTCCTTTTTTAACCCAGCCCCCCCCCC
CCCCCCCCCCCTCCCCCAGGATTTCTTTATTTTTCCCCCCCCCCCCCCCC
TGTGGGAACAATGCTCCTTCCTCTCGAGCTCTCGAGGACGCGTGGTCAAT
AGTCTAACCGCTAAGGCTTGCGAAATATAAGAGTACGCCCCCCACCCCTT
ATGATCTCGGCATCCCCCCCCGCCGCGTTGCAGGGTCTCAACCTGGTGGT
CCCCGCCGATGCCGCCGGCTCCGCCACCCGCCGCCTGATGCAGGGCGGGG
CGACCGTGGTGCCCCCCCCGCCACCCGGGGGCGTTTTCGCGGCGGGTGGC
GGCGGCGGGCGAATGCCCAACGGGGGGCGTTGGACCGACAACGGGCAGCC
GCTCCCCCTGGCGGAGGGGAGGACGGTGATCCCGATGTTGGCCCAAGGGG
ACCAGGCGTTTTTCGCCCTTTTGCTCCCTTCCCACGCGCTGAAAGGCGGC
GGCGGCGGAGAGGCTGGGGCTGCCGCGCCCCGCCCGGGGGCGGGAGCGGG
AGCTGGTGGCCCTAGAGAGGTAAAATGGGGGGGGGGGGGGCGGTCTCAGT
GTAGTCGGCCTTGGTTCGTGTCGTTGTTTCGTTCATGTGTACAATGGTTT
AATCTTGTACTTGGAAGTATTGTAATACGTGTTGCATGGGTGAGAGTGTC
GGTCGTTTTTGTGACGACTGCTGCTGTTGTTGGTTTGTTTTGCTGTTTTG
GTTTTGAGATCGTGTGTACGGGTGTCCTTGCTCGTGGTGCTTGTGGTACG
CACACGCAGCACAGCACTCGGTCGGACCGGACCGGACCGCTTTTTCCCAG
ACGTGCGCTGGCGGTGGACATTCTTGTCTGTATGTGTGTCGATAGTGTTT
GGTAAGGGGCATGAAATCCCCCACGTCCTCCCCCCCCCGCCCCCTCGGTG
TTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACA
AGCCAATTCACTTCGTGAACACGGCAACCAGGTTACCGTTTTTTTTTTTT
TACCTCTGTTTTTTTTTTTTGGCGGTAACCATAATGGTGGTCGAGTAAAT
CATGTTGTGCGGGGTGGAGAACGCTCACTCCGCGCAACGGGGGATGATCG
CACCACGTTGTGTTAAAATGGTCATGCATCCTCGAGGCAGTTACACAGTT
CTTCCAACTGCCTCTGGAAGTGAAAGCACCAGAAAATAAACTAAGTCATA
CGCAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGGCCGAACACC
CTTAGCAGGATGCAGCTCACCCTTCATGCGACTCGCCGAATACCTCACGG
CGCTTCGCGCTTGGTGGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTG
CTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGG
CATGCACGACTATGAGTACACCCCCCCCCCCCACCGAGAGAAGCCACGTG
TGTGAATGTCCTCACCCTCTGCGGACACCGGTAAAACCATTCATTCCCCG
CGCGGTTTACATGGGTTGGGATGCATCGGTTTGAGACTCCCCCCCCCTGC
TCCGTGCCTCCAGTAAGCTATTGAGTTCCCCGCGCCCTTTGCCTAGGTCG
CCGTGCATCGGTTGAGACGTTGTTGAGACTCACTCCCCCCGCCCGTTCCC
GCGGAGCACTAGCCTACCGTAGTTGATGAAAGATTCCACACACCCTGGAC
CTATTTTTTTCAAACCTCGACTACTCCATGATGAACATGATGGATGGATC
AACGACACGTTTTCGGAAAACTCTCGACAAAGACGGCTTCAACGCCGCCT
TTTTCGTCGCCGCCACTCCTTGTGCTGTTGAGAAATCGAGCTTTGAAACT
CGGTCCAGGGGGTGTGATATCTTATGTCACCTACGGTATCAGCTTCCGAG
TTGACCGAAAAGACCCTTCGCGTCCCTTCTCGGCTGTGCGTCCCCGTCCC
GTCCCAACACCTTGCCGGCACGAATCCAACCAAGCCAACCCTACGGCACA
ACCCCCCACCCCCCCCCCCCCCCCGGGGGCTGCTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTGTTCTGGAGAGCGCGATGGAGTCGGTGGCGGCGGCGGAGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGAGGCGGAGGTGGCGGCGGCGGAGGCGGTG
GTGGAGGTGGCGGCGGCGGAGGTGGCGGCGGCGGAGGCGAGAGCGAGGGT
TGCAGGCGAAGCAAGGCTTGCGGCGAGGGCGGCGAGGGCGGCGAGGGCGG
CGGCGGCGACGACGGCTATGGCTGTGGAGGACACGGCTTCAGGTGGGTAG
GGAGGAAGACAAGGGTCTCTCTTGGACGAAACGAGGGTAATACTTATGGT
AGGTGTTTTTTTTGTCGGAGGAGTCGGCGTGTTTCGCTGATTTTTCTCCG
GCTACCGTGAGAGCGCTTGCACAAGCTTGTCGTGCCTCTGGTGGACGCCG
TCCATCCCGATACGTACCCTTAAGCCCCCCACCCCAAGGATAATGACGCT
ATCAGCTTCTGGTTTATCCTTGTGAACATTAGCCTGGACCGGCAAAAACC
CGGCATATCGCTCCGTCCCGGCATTGTAGGGATGGGAGGTCCAATGACTT
CGACAAGTGTTTACAATGGGTACAACCCCCCCCACCCCCTGCTTTCTATT
CCTGTCACGCGCCCTGTTGAGTTTTCCTAACCCCGATAACCCCTCCGACC
GACGGCACTCTTGCACTTTTTCTCACGACAGTCTCCGAAGGAGAAGCGGT
TGCCGCCCTGGCCTCCTCGTTGTCGTTGTCCCCCCGCCGCGAGCCGGCCG
GGGAAACGGCAACGACTCCGGCGGTGACGGCAGCAGGTAGCGACGCCGGA
GCCCCGCCCACCGCCGGTTCACTGGAGACTCGGGGGGCGGCGGAGGAGGG
CGGCAACGACGGCGCCGCCGGCGCTGGCTTTGCCCTCCTGCTCCAACAGG
CAGACCTTGCGGCGATGCGGCGGGAGAACCGCGGGGAGTCGGGTAGGGCC
GGCGAAGGTGGTGTCGCCCCCGCCGCTGCTGCGGTGGCGACGACGACGGC
GACCGGTGCTGGTGCTGCTACTACTGCTACCGGCACGGGAGACGGGGCCG
CCGTGCGGGACGAAGAGTCACCGGAGGCAGCACCTCGAGGTGCCGAAGAA
GCCGCCGGCGCCGGCGCGGACCGTGTTGACGATGCCATGGACGTGGANN back to topCoding sequence (CDS) from alignment at chr_00:11273247..11282295- >Ec-00_007160.3 ID=Ec-00_007160.3|Name=Ec-00_007160.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2052bp|location=Sequence derived from alignment at chr_00:11273247..11282295- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGCAGGGCTCCTCTTCTGACGACAACGGGATGGCTGCGCACGGCGGCGC CGCCGGTGGCGCCGGCGCCGGCCTATTGGCCGCCCACCGGCCGCAGTCCG ACTCCGCGGGAGAACATTCCGAGGACCGTTCCGACTCGGAGGATGATGGC GACTCGGATGACGACGATTCAGACGGGGATTCGGATGACGAGGAGGAGGA TGATTCCGACGATGGCGATGATGATGACGGGCATGGCGGGCACGAGGCAG AGATGGGCGGGCAGGGGGTGGACGGGGAAGAAGGGCGCCCCGGGGTACAT CCGGTGTTTCAGCAGACCATGGACGCCGGCGCCGCGGCTGGCATCGGGTT GGGAGGGGGTGGCGGGGAAGGGTGGATTGCTCGAGGGGCTACGGCGGAGC AGCTGTCTCTGTGGGGGGTGCAGCCGCCGCCGGGCCTCGCGAGACAGTAC GCGACGCGGCACGGGGAGCGTGGGGGAGGAATGAACATGATGACCATGAA CGACTTCATGGAGAGCGACGCCGCTCTGAACCAGATGCTTCGCTCCGTCA CTCCCCAAGGCGCGGGCGGCGCCGGCGCCCCTCCCCTCGTCCGCGTTGTT CGCGGGACCGGCGGGGCAGACACGGGTTGGACTGAGATGATCGCACATGA CCTTCATGCGGCAGCGCCAGGGCCTTCCCACAACACCACCAGACTCTTCC CGGACGGCCCGTCGGCGGCCACCCAGGCGCACGCCGCCCCCGTCGTGCAC CCGCTCCTCCTGAGGCACGTCAGGGCGCCGGGCAGCACGGGCAGCGGCGG TAGGAGCAGCGGCCGGGGCGGCCGGGGCAACCGGGGGGGCGGCGGTAACG GCGGCGGCGGCGGCGCGGCCGGTGGTCGGCAGCAGTCGGTGCTCGGAATG CTGCCGAACGAGCGGCTGATCTGGGAGAGCCACGGGGTACCGGTGGGGGG TGGCGCTGGCGGCGGCGGCGGCGGCGGGGTGGTTGGTATGCCGGAGCAAA CTCTTGTGGACGCCATCGAGGGTCTCAACCTGGTGGTCCCCGCCGATGCC GCCGGCTCCGCCACCCGCCGCCTGATGCAGGGCGGGGCGACCGTGGTGCC CCCCCCGCCACCCGGGGGCGTTTTCGCGGCGGGTGGCGGCGGCGGGCGAA TGCCCAACGGGGGGCGTTGGACCGACAACGGGCAGCCGCTCCCCCTGGCG GAGGGGAGGACGGTGATCCCGATGTTGGCCCAAGGGGACCAGGCGTTTTT CGCCCTTTTGCTCCCTTCCCACGCGCTGAAAGGCGGCGGCGGCGGAGAGG CTGGGGCTGCCGCGCCCCGCCCGGGGGCGGGAGCGGGAGCTGGTGGCCCT AGAGAGAGCGCGATGGAGTCGGTGGCGGCGGCGGAGGCGGCGGCGGCGGC GGCGGCGGCGGCGGAGGCGGAGGTGGCGGCGGCGGAGGCGGTGGTGGAGG TGGCGGCGGCGGAGGTGGCGGCGGCGGAGGCGAGAGCGAGGGTTGCAGGC GAAGCAAGGCTTGCGGCGAGGGCGGCGAGGGCGGCGAGGGCGGCGGCGGC GACGACGGCTATGGCTGTGGAGGACACGGCTTCAGTCTCCGAAGGAGAAG CGGTTGCCGCCCTGGCCTCCTCGTTGTCGTTGTCCCCCCGCCGCGAGCCG GCCGGGGAAACGGCAACGACTCCGGCGGTGACGGCAGCAGGTAGCGACGC CGGAGCCCCGCCCACCGCCGGTTCACTGGAGACTCGGGGGGCGGCGGAGG AGGGCGGCAACGACGGCGCCGCCGGCGCTGGCTTTGCCCTCCTGCTCCAA CAGGCAGACCTTGCGGCGATGCGGCGGGAGAACCGCGGGGAGTCGGGTAG GGCCGGCGAAGGTGGTGTCGCCCCCGCCGCTGCTGCGGTGGCGACGACGA CGGCGACCGGTGCTGGTGCTGCTACTACTGCTACCGGCACGGGAGACGGG GCCGCCGTGCGGGACGAAGAGTCACCGGAGGCAGCACCTCGAGGTGCCGA AGAAGCCGCCGGCGCCGGCGCGGACCGTGTTGACGATGCCATGGACGTGG AN back to top
Synonyms
The feature 'Ec-00_007160.3' has the following synonyms
Synonym |
Esi0534_0007 |
Esi_0534_0007 |
|