Ec-00_005370.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_005370.1
Unique Name	Ec-00_005370.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	491

Homology

[Close]

BLAST of Ec-00_005370.1 vs. uniprot
Match: D7G7Y6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y6_ECTSI)

HSP 1 Score: 742 bits (1916), Expect = 1.390e-262
Identity = 364/385 (94.55%), Postives = 372/385 (96.62%), Query Frame = 2

Query:  623 PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSGGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSVMGAVSKAAVGKHISKLGNLGMRRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFGVKTTWTIQNFEENQRVDACSYQTIECAAATGIVRKTRMGALCYPDRADTAGTDNTGGELTNPVSIGEVLWAGSEVTAFAMRRGSVTHIHVDALEVDEKPLYLPAAGAMRSVNRGDRGPAKRAVVVCAHDMDRVVRLFKLDVRKPPAMQYGGTVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAYMFVTLRLVETCAWHPALPF 1777
            PRGPEEEANEERRD+VRARILRCQHGQALAKETCDILVDMWHKGELKDGTDS GDG G +DNGLFYGFLSRDNAPPYN RRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSVMGAV KAAVG HISKL NLG+RRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFG KTTWTIQNFEENQRVDACSYQTIECAAATGIVRKTRMGALCYPD ADTAGTDNTGGELT PVSIGEVLWAGSEVTAFA RRGSVTHIHVDALEV+EKPL+LPAAGAMRSVNRGDRGPAKRA+VVCAHDMDRVVRLFKLDVRKPPAMQYGG VSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCA+M VTLRLVETCAW+PALPF
Sbjct:    8 PRGPEEEANEERRDNVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSLGDGFGCLDNGLFYGFLSRDNAPPYNVRRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSVMGAVCKAAVGMHISKLRNLGVRRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFGGKTTWTIQNFEENQRVDACSYQTIECAAATGIVRKTRMGALCYPDTADTAGTDNTGGELTKPVSIGEVLWAGSEVTAFATRRGSVTHIHVDALEVNEKPLFLPAAGAMRSVNRGDRGPAKRAIVVCAHDMDRVVRLFKLDVRKPPAMQYGGAVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAHMSVTLRLVETCAWNPALPF 392

[Close]

BLAST of Ec-00_005370.1 vs. uniprot
Match: D7G2S5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S5_ECTSI)

HSP 1 Score: 524 bits (1349), Expect = 1.760e-173
Identity = 294/573 (51.31%), Postives = 362/573 (63.18%), Query Frame = 2

Query:  116 VYITEGLGEKLRAIPLEGMTVDGVSDAVKQACGKAGKRLATSQSRRSKGAEPRLVLRQLRCPYGMPNRQAARAANGGGDGGKTVRP--RKSLRIGCPFSVT-IRWPMTGPRKDHPYLADGVNKLYHTHPVDNGVATLL-PESKDQR-----------REYE-----HEPGADTRKGTESPRATPFDSQKPRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSGGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDIT-RSVMGAVSKAAVGKHISKLGNLGMRRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFGVKTTWTIQNFEENQRVDACSYQTIECAAATGIVRKTRMGALCYPDRADTAGTDNTGGELTNPVSIGEVLWAGSEVTAFAMRRGSVTHIHVDALEVDEKPLYLPAAGAMRSVNRGDRGPAKRAVVVCAHDMDRVVRLFKLDVRKPPAMQYGGTVSDLRRLAAELKANSIGFVVIDFPEACSYAIPGKCAYMFVTLRLVETCAWHPAL 1771
             Y  + L  KL +IP +GM +  V+  VK+ C + G  +ATS SR  KG + R V R+L+C  GM NRQ    A    DGGKTV    RKS RIGCPF V  IRWP     ++HPYL++    L H H V   V T+  P+ K+             RE E     HE   D R  TE  RAT FD QK +  +E+ NE RR D++ RILR Q G  L    C+ LVD+W KGEL DGT+ FG+G+ G DNGLF G+L   NAPPY   RR+D   +FWSKG  R  +++  F+ACL A FPV+ EGD T RSVMG   K+A+ ++++++G LG R GTSMF +S  FV+ W EG +  + L+ AFG   TWT QNFEE+ +VD  S+ TIEC  A+ +VR TRMG LC+PDR  T G     G LT   S+    W+GSEVTAFAMR G VTH HVD   V  + LYLPAAG MRSVNR   GPAKRA+++CAHDMDRVV L  LDV KP + QY G + DL  LA  L+ NSI FVV+DFPE CSYAIP +CA+MFVTLRLVE+CAWHP L
Sbjct:   57 TYNAQRLRAKLASIPTQGMDMGEVTANVKKVCREEGVHVATSDSR--KGKDGRWVSRELKCKLGMRNRQNDHKAK---DGGKTVPKILRKSQRIGCPFKVVAIRWPTKRKAREHPYLSERATTLTHNHTVTKDVDTIRQPKRKESSDSLVMANPYKLRESEAKPPGHETRDDRRDRTEGLRATAFDPQKRQ--KEQPNENRRSDIKRRILRSQEG-GLDNYICEFLVDIWEKGELIDGTEGFGNGADGFDNGLFCGYLDMANAPPYVPGRRDDPTVAFWSKGTDRLEYTEHAFKACLKAHFPVIFEGDDTYRSVMGTACKSALARNLTRIGGLGGRNGTSMFGVSPSFVESWNEGVIDGDELKKAFGTNPTWTTQNFEEDDKVDVLSFNTIECVGASDLVRNTRMGGLCHPDRPPTRG-----GVLTGTTSVRGKSWSGSEVTAFAMRTGGVTHSHVDPQMVHGEHLYLPAAGTMRSVNRRGSGPAKRAILMCAHDMDRVVDLLGLDVNKPSSSQYTGAIVDLEGLATRLRVNSIRFVVVDFPEYCSYAIPARCAHMFVTLRLVESCAWHPIL 616

[Close]

BLAST of Ec-00_005370.1 vs. uniprot
Match: D7G552_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G552_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.210e-77
Identity = 128/143 (89.51%), Postives = 130/143 (90.91%), Query Frame = 2

Query:  623 PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSGGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSVMGAVSKAAVGKHISKLGNL 1051
            PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGS GIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSV G + K  +G      G L
Sbjct:    8 PRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGELKDGTDSFGDGSRGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEARRRHSDRVFRACLTAGFPVLIEGDITRSVWGLLVKQLLGSTSRSWGTL 150

[Close]

BLAST of Ec-00_005370.1 vs. uniprot
Match: A0A6H5L482_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L482_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 4.780e-15
Identity = 57/132 (43.18%), Postives = 70/132 (53.03%), Query Frame = 2

Query:  104 GNPRVYITEGLGEKLRAIPLEGMTVDGVSDAVKQACGKAGKRLATSQSRRSKG-AEPRLVLRQLRCPYGMPNRQAARAANGGGDGGKTVRPRKSLRIGCPFSVTIRWPMTGPRKDHPYLADGVNKLYHTHPV 496
            G+P  Y  E L  +L  IPLEG +VD V+ AV +AC + G  +    S++SK  A  RLV   L C + MPNRQ         +G K  R   S R  C   V +RWP+ GPR DHPYLA     L H HPV
Sbjct:  127 GSP-AYSAEALSARLAIIPLEG-SVDDVAAAVVEACQEFGAVMRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKK-RKSSSQRTNCNMKVYVRWPVQGPRSDHPYLA--FTTLEHDHPV 253

The following BLAST results are available for this feature:

BLAST of Ec-00_005370.1 vs. uniprot

BLAST of Ec-00_005370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G7Y6_ECTSI	1.390e-262	94.55	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D7G2S5_ECTSI	1.760e-173	51.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G552_ECTSI	1.210e-77	89.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L482_9PHAE	4.780e-15	43.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:8469979..8477708 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	2553
Hectar predicted targeting category	other localisation
Gene id	Ec-00_005370.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370	Ec-00_005370	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 8469979..8477709 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370.1	Ec-00_005370.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 8472704..8476937 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370.1.1	Ec-00_005370.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8469979..8470083 +
Ec-00_005370.1.2	Ec-00_005370.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8472500..8472743 +
Ec-00_005370.1.3	Ec-00_005370.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8473229..8473287 +
Ec-00_005370.1.4	Ec-00_005370.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8473620..8473737 +
Ec-00_005370.1.5	Ec-00_005370.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8474942..8475039 +
Ec-00_005370.1.6	Ec-00_005370.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8475566..8476129 +
Ec-00_005370.1.7	Ec-00_005370.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 8476344..8477708 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370	5UTR:Ec-00_005370.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 8469979..8470083 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370.1	CDS:Ec-00_005370.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 8472704..8472743 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_005370	3UTR:Ec-00_005370.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 8476938..8477708 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:8469979..8477708+
coding sequence from alignment at chr_00:8469979..8477708+

mRNA sequence

>Ec-00_005370.1 ID=Ec-00_005370.1|Name=Ec-00_005370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=491bp
MPNRQAARAANGGGDGGKTVRPRKSLRIGCPFSVTIRWPMTGPRKDHPYL
ADGVNKLYHTHPVDNGVATLLPESKDQRREYEHEPGADTRKGTESPRATP
FDSQKPRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGE
LKDGTDSFGDGSGGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEA
RRRHSDRVFRACLTAGFPVLIEGDITRSVMGAVSKAAVGKHISKLGNLGM
RRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFGVKTTWTIQNFEENQRVDA
CSYQTIECAAATGIVRKTRMGALCYPDRADTAGTDNTGGELTNPVSIGEV
LWAGSEVTAFAMRRGSVTHIHVDALEVDEKPLYLPAAGAMRSVNRGDRGP
AKRAVVVCAHDMDRVVRLFKLDVRKPPAMQYGGTVSDLRRLAAELKANSI
GFVVIDFPEACSYAIPGKCAYMFVTLRLVETCAWHPALPF*

spliced messenger RNA

>Ec-00_005370.1 ID=Ec-00_005370.1|Name=Ec-00_005370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2553bp|location=Sequence derived from alignment at chr_00:8469979..8477708+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACGCAGTCTATAGGTGTGTGTAAGAAGACCCCGTTTCGCTGCGGTTTCAC
CATGAGCGGGAGTGCGGGCGGTGAAGGTGCTCTCTGTCATAACCAGGAAG
GCGAGGGTAATCCTAGGGTGTACATCACCGAGGGATTGGGAGAAAAGCTT
CGGGCTATTCCACTGGAGGGTATGACTGTGGATGGCGTCTCGGACGCGGT
GAAGCAAGCATGCGGAAAAGCAGGGAAACGGTTGGCAACGAGCCAGTCCC
GTAGGAGCAAGGGAGCTGAGCCTCGTTTGGTGCTCAGGCAGCTAAGGTGC
CCATACGGGATGCCCAATCGACAGGCGGCTCGTGCGGCAAATGGTGGAGG
CGACGGAGGGAAAACGGTTAGGCCGAGGAAATCGCTAAGAATCGGTTGTC
CGTTCTCGGTGACGATCCGATGGCCCATGACCGGACCACGAAAAGACCAC
CCTTATCTCGCCGACGGCGTCAACAAACTGTACCACACCCACCCGGTCGA
CAATGGTGTCGCCACCCTGCTCCCAGAGTCTAAAGACCAACGACGCGAGT
ACGAACATGAGCCTGGAGCTGATACGCGTAAGGGGACAGAATCGCCGCGT
GCGACACCATTTGACAGTCAGAAGCCCCGGGGTCCAGAGGAAGAAGCGAA
CGAGGAGAGACGCGACGATGTCAGGGCGCGCATCCTCCGCTGCCAACATG
GCCAAGCCCTGGCGAAGGAAACTTGCGACATCCTGGTCGACATGTGGCAC
AAGGGAGAACTTAAAGATGGCACGGATAGCTTCGGTGACGGGTCTGGGGG
TATTGACAATGGTCTCTTTTACGGATTCCTTTCAAGAGACAACGCCCCCC
CCTACAATGCTCGTAGGAGAGAGGACGATGGCGACTCCTTCTGGAGCAAG
GGCGAGGCGAGACGAAGGCATAGCGACCGCGTGTTCCGGGCATGCTTAAC
GGCCGGTTTTCCGGTGCTTATTGAGGGAGATATCACGCGGTCTGTAATGG
GGGCTGTTAGTAAAGCAGCTGTCGGGAAGCACATCTCGAAGCTGGGGAAC
CTTGGAATGAGGCGCGGAACGTCCATGTTTAGCTTGTCGGAGGAGTTCGT
CGACTGCTGGGTCGAAGGGAACGTGGGGGACAACATGCTAAGAGATGCCT
TCGGTGTCAAGACGACATGGACGATTCAAAATTTCGAGGAGAACCAGAGG
GTGGACGCTTGTTCGTATCAGACGATAGAATGCGCCGCCGCAACAGGTAT
CGTGCGCAAGACCAGAATGGGAGCCTTGTGCTACCCTGACAGAGCTGACA
CAGCCGGCACTGACAATACGGGAGGCGAACTCACTAATCCGGTGTCGATA
GGAGAAGTTTTGTGGGCGGGAAGCGAGGTAACGGCATTTGCCATGAGGCG
CGGTAGTGTCACCCACATTCACGTGGACGCCCTCGAGGTTGACGAGAAGC
CCTTATACCTTCCGGCAGCCGGTGCCATGCGGTCTGTGAATCGGGGAGAC
CGCGGCCCTGCGAAACGAGCAGTAGTAGTTTGCGCCCATGACATGGACCG
AGTAGTACGGCTCTTCAAACTAGACGTACGCAAACCTCCGGCGATGCAGT
ACGGCGGGACCGTTTCAGACCTCCGACGGTTGGCCGCCGAGTTGAAGGCC
AACAGCATCGGGTTTGTTGTCATCGATTTCCCGGAAGCATGCTCATATGC
GATTCCGGGAAAATGCGCATACATGTTCGTCACACTGCGGTTAGTTGAGA
CGTGCGCTTGGCACCCGGCTCTGCCCTTCTGAAGAAAACGTCACCCCGAT
CGTGGCCCGGATTCCAGGAGGGTTGTGGTCGGCATATCGACGACATTCTC
CGTAGGTGTGTGTGCTGTTGTAAGTAGAAGCGCGCACTGCAGTCAGTGGG
CAGTGCTGGGTGCGTTCCACTAAGGGTGTTTGAAGAGGTTCGCCGTTGCT
GTAACCACGATGTCGCAGAGGTCGACATGATCATGTTTGTGCGCAAACAA
TCTAGCGTGCCTATGTATTTTGCAGCGGATAGCCTCCCCCGAGATGCTCG
TTTTCACGCCCGGGACACCCCCGACTCGGACAAGCGATCCCTATAGCCAA
GTAATTTGCTGGCAGTCGCTGCAGAGGTGGACAAATGGTGTGGAGGTTGA
CGATCACGACGAAATAAATTGACCTTCGACGACGACGAGGTATTGCCTCC
GCCACGATGTCCATCACCACCACGTGGTGAACAGCGCGCAGACCTCGGTT
AACGCGCCACGGCAAGCGCTAGATGTTGGGCCACGACTAGGCTCGCTGCT
TGGGCTGAGATCGGCTTATGCCTGAGACCCGACCGTTGGCTATGCGAACG
AAAACTGACTGGTCAAAGAAATAACAAGAAATACGTGGTGACCACACCCA
ACGCAGATATTGGGACTAGTGCACGGGGGCGCTTGCTGCATTTCTTCGTT
TAACGATTTCGTCCATGTACGACAAACAACAGGACGTTACAGCAACAACG
TGTTTCGAGCGAATGAAGTCCGCCGAATAGACGAAAGGTACGCCAGCCAG
TTA

protein sequence of Ec-00_005370.1

>Ec-00_005370.1 ID=Ec-00_005370.1|Name=Ec-00_005370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=491bp
MPNRQAARAANGGGDGGKTVRPRKSLRIGCPFSVTIRWPMTGPRKDHPYL
ADGVNKLYHTHPVDNGVATLLPESKDQRREYEHEPGADTRKGTESPRATP
FDSQKPRGPEEEANEERRDDVRARILRCQHGQALAKETCDILVDMWHKGE
LKDGTDSFGDGSGGIDNGLFYGFLSRDNAPPYNARRREDDGDSFWSKGEA
RRRHSDRVFRACLTAGFPVLIEGDITRSVMGAVSKAAVGKHISKLGNLGM
RRGTSMFSLSEEFVDCWVEGNVGDNMLRDAFGVKTTWTIQNFEENQRVDA
CSYQTIECAAATGIVRKTRMGALCYPDRADTAGTDNTGGELTNPVSIGEV
LWAGSEVTAFAMRRGSVTHIHVDALEVDEKPLYLPAAGAMRSVNRGDRGP
AKRAVVVCAHDMDRVVRLFKLDVRKPPAMQYGGTVSDLRRLAAELKANSI
GFVVIDFPEACSYAIPGKCAYMFVTLRLVETCAWHPALPF*

mRNA from alignment at chr_00:8469979..8477708+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_005370.1 ID=Ec-00_005370.1|Name=Ec-00_005370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7730bp|location=Sequence derived from alignment at chr_00:8469979..8477708+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACGCAGTCTATAGGTGTGTGTAAGAAGACCCCGTTTCGCTGCGGTTTCAC
CATGAGCGGGAGTGCGGGCGGTGAAGGTGCTCTCTGTCATAACCAGGAAG
GCGAGGTGTGTGCCCCCAACGACGACTCCACTCGGCTGCAGAAGTAGGAG
ATATGGGTGAAGGGCTGCACATACTGGACACTTTAGTCTACAGCAGCTTG
TGAACTTGGACAGCAGTAAGAAGGACCTGTTGAGTATCTGACGAAGGCTG
GCACCCGTTGGGTAAACCTGCGAAGAAAAAGTGTGTCGACTTTCTAACCT
GTGGGTCACGTGGGCAGTACCCTTGCATGACGATACCCCCCAGCCCAAGT
GCAGAAGATAGCCAGCCGGAGGCATAGACGCGGCGCCGGGACGGCATCGT
TGACGCCGTCTGGTCGAGAGGTTTCCGCAAATGTAACGTGACTTTTGAGC
ATTCTCTCAGTCGCGCAGCAAGCGGGCGTAGCAAATGGTCCAGTCGTATT
TCTTTGTTCCGCGTATTAACACGGTTCAACACGGTGTACCTTCCTTATCC
TGCGGACTACCGTAGTACTATATACCGTGTATGACACAAGATACCACACC
CTTGACCAACAAACAATGCTCGATTGCTCCACAACACAACAGTGGTCGCG
CCGATAGTGTTTGTGTGGGAACCGTGTCGTCTACAGCATTCTGGCAAGGC
GTCGTTGGGTTTACGCCTTCTGTTCGTCGTTGGAGATCTCGACCCGATAA
ACAGGGGGTGTGGTTTGGCAGCGTCACCGACGGTATACATACCGGTGTAG
ATGCCGTACGTGCGTTTCGTATCGGTTTCGTGTTGCGATTGTTTGTCTGC
AGATAGTGCTGCAGCAGCACCTGTACCTCTATTCCCCGCACCTGTGTTTG
TTTACGCCGCGCGTTGTGTGACGGCTGACAGAGGCCGTGTGGTTGCAACT
AGGACCCACGGAAACAGGAGGCGGCGATAGTCGGCACAGGAGTGTATGCA
CGCGACGAAATACGTCCTGCCTAGAAAGGATACTGTTTTGGTCGAGCTAT
TCATTCACACAGCACAGCCTTGCGTTTCGAGGTGGTCCCTCTCCCCGCTA
CCGAACCTACACCAATCTTCGCGTCACGACCTGTGTACAAAGTCCGTCTT
GTTCTGTGGTGGTTGATACAGACCAGGCGGATGAACTACACGAAGCCCAG
AAATAAACGTGAACTCGAGAGTGTGGGATAGCCCGTATACAAACCGTCGC
GTCTACTGGTACCAGTTCGTATAATTATTTTTGTCCCCATATATCGACGG
GAGATCCCTCTCCACACATATCTAGGCTACATCAAGCAATGACAATGACA
TCCGCCAATAACTCCGTGTATGTGCTGTCTCACCCTGCCAGTAGTGCTGT
CTTGGCGATCCCGGCGGTGTTGCGTGGTTCGCTGACTGCTCGTCCTCATT
CTCCTTGTGTGCGCCAAGCAACCGCGTTTCGTTTTGGGGTATAAATGGTG
GTGAGACACGGTCATCTGCTGTCGGGGCCACGAGGCAACGTGTGTGGTGA
AGAGCGCCCTATTTTGCTTGTTCGTCGCATGCCAACAGATCGTCCATCGG
TGCTCTATAGACCACGTGCTGGTCGAAAAGGATGGAAAAGTCGGGCGTCT
TGTATCTAAACTTGGCACCCCGGTAGGTAGAGGCTGTTTTTCCCCTCGTC
GAAGGGAGTGCAAAGAACGGTCGCGCTTCCGTCTCCGCGGCTCATCATGA
ACTACGCGTCTCCGTACTGGTGCGAGTTCGTGTCCCGGGGTTCAGGATGC
GACACAGACACGCACACGCTTTTGCATGCACACACCCTACATAGCAGTGG
GAGCGCTACCATAAGGCTGCGTGCTGCTGCCACCCAGCGCACCCCACTCA
GGACTGCTGCCCGTGTGCAGACGGAGGAAGTCCGTAGGGTGCGGTAGGAG
CACTGTTGCCCCACTGCTACTGACATGAAGCCGCTTTAATTCTGTAAACA
GTAGCCAGCATGATGCTTCCCGGAAACATTCTAGTCTCGAAATGTGCCTC
CTTACTCGGAAACTTTTCGATTCCCGGTCCGACACTGTGTAAAAAAACCA
AACGCCCACTGGCGTCAATTTCCTGGGGGGCATGCGCAGAACGGTAGGTA
TACAGAGGCTCACATCTTCCACGAAAAAAAATGAAATAAACAAAACTTGA
AGAAAACGTACATCAGTGGTGGATCCTACACGAAAACTCGGTTTCGTTGC
CCTCGACAGTGGCGTCAAAGCTAGAAGGTGAGCCCCGATTTCGACGTATT
TCATCTCCGGGCACCGTTCTGCAGTCGACATGGGGTGGTGACCACCCCGA
CATGCACATGTCCAACAATCGAACTCGGTATTTATTGTATTGGGGAGCGA
TCGGGTAAGCAGGGACGGAGTTCGCTTAACCCAATGTTGAAAACCTAGCT
AGGTGGAAGGGACAGAAGCCATACGCCCATGTCGTTCTCAATGTTTCGTG
TGTTGCTTCGTTTGTATTCAGGGTAATCCTAGGGTGTACATCACCGAGGG
ATTGGGAGAAAAGCTTCGGGCTATTCCACTGGAGGGTATGACTGTGGATG
GCGTCTCGGACGCGGTGAAGCAAGCATGCGGAAAAGCAGGGAAACGGTTG
GCAACGAGCCAGTCCCGTAGGAGCAAGGGAGCTGAGCCTCGTTTGGTGCT
CAGGCAGCTAAGGTGCCCATACGGGATGCCCAATCGACAGGCGGCTCGTG
CGGCAAATGGTGGAGGTGAGGCTTGCACGGCACAATAAGGGAACCCATGC
GTAGTGTTTAGTAAATCTCAGATTTGTTGTCGCTGGAAGCCCACTTGAAC
AATTCGGTCGCGAGAGAGTCCCTCTAGTCGAACGCCTGCCCTTTTTACTA
CCTTGCATGTAATGGCGGGCGGAATGTCTGTGTTTGTGCTAGGGCGTTCA
GCGGGACATTTCGGGATACTAAATAACTGTCGTGTGGATACCCCTGGATC
TTGTACGTTGCGACTGGAGTGGCTGGATGACACCAGCACGTAACTCGCCT
GTTGCTGCGTATTCGCAGGTGGTATGAGGATTCGATACCCCTAGGCCTCT
AACGATGAGTCAACCTCTTCGGAGGGCGTACAACCGCGTTTGTCGAATCC
TACGTTGTCCGTACAATGCTACGTTGCCCGTTGCAATGTCTTGCCCCTAT
GCCCTGGTTACATAGACGTTTGCGGACTCCCTCTTGCACGCTGATGCCAG
GCGACGGAGGGAAAACGGTTAGGCCGAGGAAATCGCTAAGAATCGGTTGT
CCGTTCTCGGTGAGAGTATATACCGCTCATCATTGCGTCGACGAGCCCGT
TTACTATCGAGTGTGTTGGAGTGTGGTTCAGGGTGGTTGGCCTGCCTGCG
CAAGCAAGTTTGGGCTGCGCGCAAGGCATGGGCGTTTAAGGTTGACGAGA
GTCCCAGTGCGAGGCCTACGATATGCCACCTGTCTCGGCGATACGTAACA
AGGACCCGTGTGGACAAGTGGGACGTTCGACCAATACGATAGATGTCGAA
GGGGCCCCCAACGGTAATGTCGACGAACCACCGCGGCGGTCCAAACCCGG
TCCCATGCCGTTGTTCTTGGTCCGTCGATGCATATCGTTAGGTGACGATC
CGATGGCCCATGACCGGACCACGAAAAGACCACCCTTATCTCGCCGACGG
CGTCAACAAACTGTACCACACCCACCCGGTCGACAATGGTGTCGCCACCC
TGCTCCCAGGTAGGCCGTATTTTCTTGCATGTCACACCACATGTTCACCC
GTGGTATGTAGGCGCGTACACAACAAGGCGGTCCCAACTCTACACCAAGC
AAACCAAATATTCTGCAGTATTGTTGTGCTACAGCAGCATTCATATTGCA
TGCATAGCGAAACGCGGCTATCGCAAGCCACGCAGATGATGTGCCTAACC
AATTAACTGTTATACGGTCGAGAACAGCAGTACACTTATTATTGGGGGGT
GAATTTTCCGGCGCGGTTTGGAACCTCGGCAACGTCATTTTCCGTTTAGT
TCTGAGGGTGAGAAGAGACGAATGTGCATTGCCCCGATCTTAGCGGGTTG
GTGTATCTTAGTCACTGCGCCATGATGGTGATTGTCTTCCTCCGAAGGAT
AAGACGGCACAGCAGTCCCGGTGTAGTTAGGTCTTACCGACTTGTGCCAC
CCCCGGGAGGCATGCTCCGACCTCCCGGAACGGGGAACCTTGTTCTATAC
ACATGTCATACTGCAGAGTGGTGCTGCAGATAGAGTCTTTGCCACTGCTT
TCTTGGAGCAGCCATGGAACCCGTTGTACGCGACGTGTACGCGACAACTG
TCTCTAGGATGTAGGTGACAGCAGGCTCTGGTGTGCAGGTTGACAGGATA
GCCTGCCTGCTCGGACAAAGCAGAAACTGCACCTCCCCCCCCCCCCCCCC
GGGGAAGGTTGGGCCAACCCCCGCGGGGTTTTGTATGTCCCAAAAAATAT
TTTCCCCTGGAAACCAAAACCCCGAAAACCTTGGGTAAAGCCCCGGACCC
ACCCCCCCACGCCCGTTGTTTTCACCAACCCGAATCTAAAAACCCACCAC
CCCAGTACCAAAATTAACCCGGGGCTGAAACCCGTAAAGGGACAAAAACC
CCCCGCGCGACACCCTTTTACAATCCAAAAGGTAAAACAGAAAAAAATGG
GGGGGGGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTCCCCCCCCCCCCCCCCGTGGTATGCTTGGTCAACCT
CGCGCGTGCTTTGCTATGTCCTAAAATATATTTACGCGTGATAACAAAAC
CCACGAACACTTCGGGTAACGCCCTGACCCAACCACTCGACGCCCGTTGT
TTCGACGACGCAGAGTCTAAAGACCAACGACGCGAGTACGAACATGAGCC
TGGAGCTGATACGCGTAAGGGGACAGAATCGCCGCGTGCGACACCATTTG
ACAGTCAGAAGGTTAGATCAGAAAATACTGAGGTGGGCCCCCGTAGGCCA
GGGTTAACTAGGCACACACGTATGCGCTGGAGGATGAAGGGGACTCGGTC
AACAAGAAACTAATCTCGATGAACAGGTTAGGTCCAGACTACCCACTCTT
CGTCCTCCTGGTACGAGCCGGGGGGACTTGGTCATTAGGTGGACGGAAGA
TGCCTGTCCCCGCAACGCCAACCCAGGGTCGACGATGGTATCCCGGCGAA
ACGTGAGGTCGTAACACGTCTCAAATCGCGCGGCGGGCTCGTACTATTTT
CGCGTCGCGCAAACATGCACACCTCGTGACACCGTTCGGGTGTAGAACAG
CAGGCAGCGTTTGTCGTAGGTGCGTAGCCGGTACTCCACCCGGTCTATCA
ACGCCAGAACGGCCCCACGGCTGCCCTGTTTTATTCTTCATATCAGCATT
GCTGAATCGATTTCGGGCGGCGAGCATCTGACGCGCAGACCCATACGCCG
GACCCCCACACGTCCTGTGCCTGCACATCTTTCCCAGCCCCGGGGTCCAG
AGGAAGAAGCGAACGAGGAGAGACGCGACGATGTCAGGGCGCGCATCCTC
CGCTGCCAACATGGCCAAGCCCTGGCGAAGGAAACTTGCGACATCCTGGT
CGACATGTGGCACAAGGGAGAACTTAAAGATGGCACGGATAGCTTCGGTG
ACGGGTCTGGGGGTATTGACAATGGTCTCTTTTACGGATTCCTTTCAAGA
GACAACGCCCCCCCCTACAATGCTCGTAGGAGAGAGGACGATGGCGACTC
CTTCTGGAGCAAGGGCGAGGCGAGACGAAGGCATAGCGACCGCGTGTTCC
GGGCATGCTTAACGGCCGGTTTTCCGGTGCTTATTGAGGGAGATATCACG
CGGTCTGTAATGGGGGCTGTTAGTAAAGCAGCTGTCGGGAAGCACATCTC
GAAGCTGGGGAACCTTGGAATGAGGCGCGGAACGTCCATGTTTAGCTTGT
CGGAGGAGTTCGTCGACTGCTGGGTCGAAGGGAACGTGGGGGACAACATG
CTAAGAGATGCCTTCGGTGTCAAGACGACATGGACGATTCAAAATTTCGA
GGTGAGCTAGCCTTGAACGCCAAGGTTTAGTCAGTGTAGCTGTAGCTGTA
TCTGTAGTGGGTTAGGGGTAGGGTAGGGACAAACGGTCAATTGCAAATTG
GGGAACCGGTTGAAGAGTAAGACAGCACACTTGGCGCAGGTTCGCGGTGG
GGCTAATGGTATCGTGAACGGCCCGCCCCATCAACGTGTGTTTGTGTACG
GTGCCTGTTGTGCAGGAGAACCAGAGGGTGGACGCTTGTTCGTATCAGAC
GATAGAATGCGCCGCCGCAACAGGTATCGTGCGCAAGACCAGAATGGGAG
CCTTGTGCTACCCTGACAGAGCTGACACAGCCGGCACTGACAATACGGGA
GGCGAACTCACTAATCCGGTGTCGATAGGAGAAGTTTTGTGGGCGGGAAG
CGAGGTAACGGCATTTGCCATGAGGCGCGGTAGTGTCACCCACATTCACG
TGGACGCCCTCGAGGTTGACGAGAAGCCCTTATACCTTCCGGCAGCCGGT
GCCATGCGGTCTGTGAATCGGGGAGACCGCGGCCCTGCGAAACGAGCAGT
AGTAGTTTGCGCCCATGACATGGACCGAGTAGTACGGCTCTTCAAACTAG
ACGTACGCAAACCTCCGGCGATGCAGTACGGCGGGACCGTTTCAGACCTC
CGACGGTTGGCCGCCGAGTTGAAGGCCAACAGCATCGGGTTTGTTGTCAT
CGATTTCCCGGAAGCATGCTCATATGCGATTCCGGGAAAATGCGCATACA
TGTTCGTCACACTGCGGTTAGTTGAGACGTGCGCTTGGCACCCGGCTCTG
CCCTTCTGAAGAAAACGTCACCCCGATCGTGGCCCGGATTCCAGGAGGGT
TGTGGTCGGCATATCGACGACATTCTCCGTAGGTGTGTGTGCTGTTGTAA
GTAGAAGCGCGCACTGCAGTCAGTGGGCAGTGCTGGGTGCGTTCCACTAA
GGGTGTTTGAAGAGGTTCGCCGTTGCTGTAACCACGATGTCGCAGAGGTC
GACATGATCATGTTTGTGCGCAAACAATCTAGCGTGCCTATGTATTTTGC
AGCGGATAGCCTCCCCCGAGATGCTCGTTTTCACGCCCGGGACACCCCCG
ACTCGGACAAGCGATCCCTATAGCCAAGTAATTTGCTGGCAGTCGCTGCA
GAGGTGGACAAATGGTGTGGAGGTTGACGATCACGACGAAATAAATTGAC
CTTCGACGACGACGAGGTATTGCCTCCGCCACGATGTCCATCACCACCAC
GTGGTGAACAGCGCGCAGACCTCGGTTAACGCGCCACGGCAAGCGCTAGA
TGTTGGGCCACGACTAGGCTCGCTGCTTGGGCTGAGATCGGCTTATGCCT
GAGACCCGACCGTTGGCTATGCGAACGAAAACTGACTGGTCAAAGAAATA
ACAAGAAATACGTGGTGACCACACCCAACGCAGATATTGGGACTAGTGCA
CGGGGGCGCTTGCTGCATTTCTTCGTTTAACGATTTCGTCCATGTACGAC
AAACAACAGGACGTTACAGCAACAACGTGTTTCGAGCGAATGAAGTCCGC
CGAATAGACGAAAGGTACGCCAGCCAGTTA

Coding sequence (CDS) from alignment at chr_00:8469979..8477708+

>Ec-00_005370.1 ID=Ec-00_005370.1|Name=Ec-00_005370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1473bp|location=Sequence derived from alignment at chr_00:8469979..8477708+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCCAATCGACAGGCGGCTCGTGCGGCAAATGGTGGAGGCGACGGAGG
GAAAACGGTTAGGCCGAGGAAATCGCTAAGAATCGGTTGTCCGTTCTCGG
TGACGATCCGATGGCCCATGACCGGACCACGAAAAGACCACCCTTATCTC
GCCGACGGCGTCAACAAACTGTACCACACCCACCCGGTCGACAATGGTGT
CGCCACCCTGCTCCCAGAGTCTAAAGACCAACGACGCGAGTACGAACATG
AGCCTGGAGCTGATACGCGTAAGGGGACAGAATCGCCGCGTGCGACACCA
TTTGACAGTCAGAAGCCCCGGGGTCCAGAGGAAGAAGCGAACGAGGAGAG
ACGCGACGATGTCAGGGCGCGCATCCTCCGCTGCCAACATGGCCAAGCCC
TGGCGAAGGAAACTTGCGACATCCTGGTCGACATGTGGCACAAGGGAGAA
CTTAAAGATGGCACGGATAGCTTCGGTGACGGGTCTGGGGGTATTGACAA
TGGTCTCTTTTACGGATTCCTTTCAAGAGACAACGCCCCCCCCTACAATG
CTCGTAGGAGAGAGGACGATGGCGACTCCTTCTGGAGCAAGGGCGAGGCG
AGACGAAGGCATAGCGACCGCGTGTTCCGGGCATGCTTAACGGCCGGTTT
TCCGGTGCTTATTGAGGGAGATATCACGCGGTCTGTAATGGGGGCTGTTA
GTAAAGCAGCTGTCGGGAAGCACATCTCGAAGCTGGGGAACCTTGGAATG
AGGCGCGGAACGTCCATGTTTAGCTTGTCGGAGGAGTTCGTCGACTGCTG
GGTCGAAGGGAACGTGGGGGACAACATGCTAAGAGATGCCTTCGGTGTCA
AGACGACATGGACGATTCAAAATTTCGAGGAGAACCAGAGGGTGGACGCT
TGTTCGTATCAGACGATAGAATGCGCCGCCGCAACAGGTATCGTGCGCAA
GACCAGAATGGGAGCCTTGTGCTACCCTGACAGAGCTGACACAGCCGGCA
CTGACAATACGGGAGGCGAACTCACTAATCCGGTGTCGATAGGAGAAGTT
TTGTGGGCGGGAAGCGAGGTAACGGCATTTGCCATGAGGCGCGGTAGTGT
CACCCACATTCACGTGGACGCCCTCGAGGTTGACGAGAAGCCCTTATACC
TTCCGGCAGCCGGTGCCATGCGGTCTGTGAATCGGGGAGACCGCGGCCCT
GCGAAACGAGCAGTAGTAGTTTGCGCCCATGACATGGACCGAGTAGTACG
GCTCTTCAAACTAGACGTACGCAAACCTCCGGCGATGCAGTACGGCGGGA
CCGTTTCAGACCTCCGACGGTTGGCCGCCGAGTTGAAGGCCAACAGCATC
GGGTTTGTTGTCATCGATTTCCCGGAAGCATGCTCATATGCGATTCCGGG
AAAATGCGCATACATGTTCGTCACACTGCGGTTAGTTGAGACGTGCGCTT
GGCACCCGGCTCTGCCCTTCTGA

Synonyms

The feature 'Ec-00_005370.1' has the following synonyms


Synonym
Esi0432_0016
Esi_0432_0016