Ec-00_005180.7 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_005180.7
Unique NameEc-00_005180.7
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length130
Homology
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BLAST of Ec-00_005180.7 vs. uniprot
Match: D8LMP5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP5_ECTSI)

HSP 1 Score: 823 bits (2127), Expect = 2.160e-286
Identity = 592/812 (72.91%), Postives = 615/812 (75.74%), Query Frame = 1 
Query:   34 NDCESNDPNSLDNNNQDAGAAATATVMPSTRPIRGRSGRTLKRSMIRPAARFARTSCRRKTEAS*NVTRVLLEMRSP-----VGQEAAEQLPNMP--REGVPH-QEDAQLGGGPRKESNRKPLTKAQLKRTKRKSTIGKPFPSPTSRPRRFASTRRLAGNKSGRTPWRHTLSARGVPARAGXXXXXXXXXXGGA*RTARP------VEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLDKRADKTGTTKQACLGGETAGKATARNGVTCFQGSTXXXXXXXXXXXXAAATGLRKSPVSNPPLDAQRWGRGTSPHGRAR-RVRVSRKERQRHYCGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD 2424
            NDCESNDPNSLDNNNQDAGAAATAT       +     RT +++   P     +  C    +      R +++         V Q   +Q  + P  R  V H ++   L     K +NRKPLTKAQLKRTKRKSTIGKPFP P        + +     K  R   R    A    A  G                A P      VEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGL + + +    +    G    GK+                             G  + P   P       G     H   R       +       GGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD
Sbjct:    8 NDCESNDPNSLDNNNQDAGAAATAT----DNAVNAAHPRTKRKN---PEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPD-----ITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQEQAEAAAEAAQAVPDAQPDQVEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAVGGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLGQESRQDRDDEAGVFGRRDGGKSNGEERGNLLPRIDNDDNRSDNISSRGGGNGSEEEPCVEPASRRTAVGERDVSHTEERDEFAFPGRNDNDTTAGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGNDAAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXXTCSYLTWLESRSDFNHWPSPSSDDDDNAASD 807
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BLAST of Ec-00_005180.7 vs. uniprot
Match: A0A6H5JQU9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU9_9PHAE)

HSP 1 Score: 484 bits (1245), Expect = 8.300e-154
Identity = 429/860 (49.88%), Postives = 476/860 (55.35%), Query Frame = 1 
Query:   43 ESNDPNSLDNNNQDAGAAATAT--VMPSTRPIRGRSGRTLKRSMIRPAARFARTSCRRKTEAS*NVTRVLLEMRSP-----VGQEAAEQLPNMP--REGVPH-QEDAQLGGGPRKESNRKPLTKAQLKRTKRKSTIGKPFP------SPTSRPRRFASTRRLAGNKS-GRTPWRHTLSARGVPARAGXXXXXXXXXXGGA*RTARP------VEAIVDQQVAIAVFSSSPXXXXATPQVPSPLPPSSPRSLATDLEDRRVAIEADRRALLESTSAFRGHRSVGGGSYVGGAGGARSIGDSGGGVGDRVGEASLDVRVENNSXXXXXXXXXAV--------------------------------------GGRGWRSTVNIGNSSSGVSSDGXXXXXXXXXXXXXXXRNNAGVRTGGAXXXXXXXXXXXRDVQGAATSSGGDNLDHXXXXXXGTGDGVGNITTLGHLLSVLGSRRIRVSPNGGIGGIDDXXXXXXXXXXXPSSVPCSPLLPSYSRRSNNNKSISNSSHGVGNPATDPETRSAAQAAMAVSRAASRYTSLVPEQALAVQGLAALESSPTLRQLRAVARLVVGGSASAGMAGAPALASVSRRRQPQDGLDKRADKTGTTKQACLGGETAGKATARNGVTCFQGSTXXXXXXXXXXXXAAATGLRKSPVSNPPLDAQRWGRGTSPHGR-ARRVRVSRKERQRHYCGGTTGSASPILSDSSATVACGSSTSIPESFAHTSGND-AAPSGSINDGANTAVAGAEDACGGDADGAGVAGSDHAGGGISVSANGAAGPGGVAINSGRVHSSPLSSNXXXXXXX---TCSYLTWLESRSDFNHWPSPSSDDDDNAASD 2424
            ESNDPN L+NNNQDAGAAATAT   + + RP      RT +++   P        C    +      R +L+         V Q   +Q  + P  R  V H +          K ++RKP  KAQLKR KRKS +GKP P      S   + +   +T ++   K   R   R   +A    A  G                A P      VEAIV++QVA AVFSSSP    ATPQVPSPLPPSSP SLATDLEDRRVAIEADRRAL ESTSAFRGHRSVGGGSY+GGAGGARSI DSGGGVG  VGEASLD+RVE++S                                                 GGRGWRST NI NSSSGV S G          XXXXXR          XXXXXXXXXXX                 XXXXXXG GD +GNITTLGHLLSVLGS R+RVSPNG                                                   ATDPETRSAAQAAMA SRAASRYTSL PEQALAVQGLAAL+SSPTLRQLRAVARLVVGGSASAGMAGAPA+ASVSRR+QPQ GL + + +         G    GK+ +    +                      G  + P   P         G   H           +   +   G TTGSAS ILSDSSA VAC S TSIPES AH SGND AAPSGSINDG NTAVAGAE+A GGDA+GAGVAGS HAGGGISVS  GAAGPGGVAINSGRV SSPL++ XXXXXXX   TCSYLTWLE+RSDFNHWP PSS DDD+ ASD
Sbjct:   35 ESNDPNCLNNNNQDAGAAATATDNAVNAARP------RTRRKN---PEKDDDGDRCPICQDLLPEENRGILKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSSAEALEKNADRKPPRKAQLKRAKRKSAVGKPSPGDRYSESDVLQQKPDITTEKIRVRKKVSREQIRQNATAPHPQAPGGFLHAQEQTEAAAEAAQAMPDAQQDQVEAIVNRQVAFAVFSSSPSPPPATPQVPSPLPPSSPHSLATDLEDRRVAIEADRRALFESTSAFRGHRSVGGGSYLGGAGGARSIDDSGGGVGVSVGEASLDMRVESDSGGGGDVGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGWRSTANIDNSSSGVGS-GNRDADDSNSRXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXGRGDRIGNITTLGHLLSVLGSGRMRVSPNG---------------------------------------------------ATDPETRSAAQAAMAASRAASRYTSLAPEQALAVQGLAALKSSPTLRQLRAVARLVVGGSASAGMAGAPAVASVSRRQQPQHGLGQESGRYRDDDAGVSGRGDGGKSNSEERGSLLPRIDSDDNRSINVSGRGGGNGAEEEPCIEPVARRTAAVEGDVSHTEDGDEYTFLGRNDNKTTAGETTGSASSILSDSSAAVACSSPTSIPESSAHPSGNDVAAPSGSINDGTNTAVAGAENAYGGDANGAGVAGSGHAGGGISVSTIGAAGPGGVAINSGRVQSSPLNNXXXXXXXXXXXTCSYLTWLEARSDFNHWPWPSSSDDDDGASD 832
The following BLAST results are available for this feature:
BLAST of Ec-00_005180.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMP5_ECTSI2.160e-28672.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQU9_9PHAE8.300e-15449.88RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:7885971..7893788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2877
Hectar predicted targeting categorysignal peptide
Gene idEc-00_005180.7
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180Ec-00_005180Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 7884297..7896365 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180.7.1Ec-00_005180.7.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7885971..7885994 +
Ec-00_005180.7.2Ec-00_005180.7.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7886872..7886958 +
Ec-00_005180.7.3Ec-00_005180.7.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7887319..7887443 +
Ec-00_005180.7.4Ec-00_005180.7.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7888335..7888463 +
Ec-00_005180.7.5Ec-00_005180.7.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7889033..7889107 +
Ec-00_005180.7.6Ec-00_005180.7.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7889753..7889842 +
Ec-00_005180.7.7Ec-00_005180.7.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7890518..7890604 +
Ec-00_005180.7.8Ec-00_005180.7.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7890855..7892178 +
Ec-00_005180.7.9Ec-00_005180.7.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7892314..7892375 +
Ec-00_005180.7.10Ec-00_005180.7.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7892689..7893542 +
Ec-00_005180.7.11Ec-00_005180.7.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 7893769..7893788 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0051805UTR:Ec-00_005180.7Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 7885971..7885994 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180.7CDS:Ec-00_005180.7Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 7891567..7891956 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0051803UTR:Ec-00_005180.7Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 7891957..7892178 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_005180.7Ec-00_005180.7Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 7891567..7891956 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_005180.7 ID=Ec-00_005180.7|Name=Ec-00_005180.7|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=130bp
MMVVVVVVLQPPPLALSRAHRSCPHTAGVATTTKALAIAATASGTQPPTR
KPEVRRRRPWQSLERRLGTPRWCQSKRWQCRDWQPSSHRRRCGSCARSPG
LWSAAAPQLGWQVLRLWQACHGDGNRKTG*
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spliced messenger RNA

>Ec-00_005180.7 ID=Ec-00_005180.7|Name=Ec-00_005180.7|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2877bp|location=Sequence derived from alignment at chr_00:7885971..7893788+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GCAGCAGCAGCAGCAGCATAATGCACGGCGACAGTAACGACTGCGAAAGC
AACGATCCAAACAGCCTTGACAACAACAACCAGGACGCCGGAGCTGCCGC
AACGGCAACAGATAATGCCGTCAACGCGGCCCATCCGAGGACGAAGCGGA
AGAACCCTGAAAAGGTCGATGATAAGGCCCGCTGCCCGATTTGCCAGGAC
CTCCTGCCGGAGGAAAACAGAGGCATCGTGAAATGTGGACACGTGTTCTG
CTTGAAATGCGTTCTCCAGTGGGTCAAGAAGCAGCAGAACAGCTGCCCAA
CATGCCGCGCGAAGGTGTGCCACATCAAGAAGACGCTCAGCTTGGCGGAG
GCCCTAGAAAAGAATGCTAACCGGAAACCTCTGACGAAAGCCCAGCTGAA
GAGGACGAAGAGGAAGTCTACTATCGGCAAGCCCTTCCCGAAGCCCGACA
TCACGACCGAGAAGATTCGCGTCCACAAGAAGGTTAGCCGGGAACAAATC
AGGCAGAACGCCATGGCGCCACACCCTCAGGCGCCAGGGGGGTTCCTGCA
CGCGCAGGAGCAGGCGGAGGCGGCAGCGGAAGCGGCACAGGCGGTGCCTG
ACGCACAGCCAGACCAGGTGGAAGCCATCGTGGACCAACAGGTAGCCATC
GCGGTGTTCTCGAGTTCCCCCCCCCCTCCCCCTGCTACCCCGCAAGTTCC
CTCGCCCCTGCCGCCGTCGTCGCCGCGTTCTCTTGCGACGGACCTTGAAG
ACCGGCGGGTAGCGATCGAGGCCGACCGCCGGGCGTTGTTGGAGTCTACC
TCAGCTTTCAGGGGGCACCGCAGCGTCGGCGGGGGGTCCTACGTTGGAGG
AGCCGGGGGGGCGAGGTCGATTGGTGACAGCGGAGGCGGGGTCGGTGACC
GTGTCGGCGAGGCAAGCCTTGACGTGAGAGTGGAAAACAACAGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGCGGTCGGTGGTCGCGGATGGAGATCGAC
TGTGAACATAGGCAACAGCAGCAGCGGCGTCAGCAGCGACGGGGGTGGGG
ATGGCTCTGGAAACAGTGACGCGGACAACAGCAACAGCAGGAACAACGCC
GGCGTGCGCACCGGCGGGGCGGCAGAAGCCGCGGCCCAAGAATCTAGCTC
GAATCGTGACGTGCAAGGAGCAGCGACATCGAGCGGCGGAGACAACCTCG
ACCATGACGACGACGACGACGATGGTACGGGTGACGGCGTCGGCAACATC
ACCACGCTCGGGCACTTGCTGTCGGTCTTGGGCAGCCGTAGGATAAGGGT
GTCACCAAACGGTGGTATTGGTGGTATTGATGATGGTGGTGGTGGTGGTG
GTATTGCAGCCGCCGCCCCTAGCTCTGTCCCGTGCTCACCGCTCCTGCCC
TCATACAGCAGGCGTAGCAACAACAACAAAAGCATTAGCAATAGCAGCCA
CGGCGTCGGGAACCCAGCCACCGACCCGGAAACCAGAAGTGCGGCGCAGG
CGGCCATGGCAGTCTCTCGAGCGGCGTCTCGGTACACCTCGCTGGTGCCA
GAGCAAGCGTTGGCAGTGCAGGGACTGGCAGCCCTCGAGTCATCGCCGAC
GCTGCGGCAGCTGCGCGCGGTCGCCAGGCTTGTGGTCGGCGGCAGCGCCT
CAGCTGGGATGGCAGGTGCTCCGGCTCTGGCAAGCGTGTCACGGAGACGG
CAACCGCAAGACGGGTTAGGACAAGAGAGCAGACAAGACCGGGACGACGA
AGCAGGCGTGTTTGGGAGGCGAGACGGCGGGAAAAGCAACGGCGAGGAAC
GGGGTAACTTGCTTCCAAGGATCGACAACGACGACAACCGCAGCGACAAC
ATCAGCAGCAGAGGCGGCGGCAACGGGTCTGAGGAAGAGCCCTGTGTCGA
ACCCGCCTCTCGACGCACAGCGGTGGGGGAGAGGGACGTCAGCCACACGG
AAGAGCGCGACGAGTTCGCGTTTCCAGGAAGGAACGACAACGACACTACT
GCGGGAGGAACCACCGGCTCGGCTTCTCCCATCCTCAGCGACTCTTCGGC
TACCGTTGCCTGCGGCTCTTCGACGTCCATCCCCGAAAGCTTTGCGCACA
CATCCGGCAATGACGCTGCCCCCAGCGGCTCCATCAACGACGGCGCAAAC
ACTGCTGTTGCCGGCGCTGAAGATGCCTGTGGTGGCGACGCCGATGGTGC
CGGGGTAGCAGGTAGTGACCATGCTGGTGGAGGTATCAGTGTTAGCGCGA
ATGGCGCTGCAGGACCTGGTGGAGTTGCGATCAACTCCGGCAGGGTCCAC
TCGAGCCCCCTCAGCAGCAACAACAACAATAACAACAACAACACCTGCAG
CTACCTGACGTGGCTAGAATCTAGGTCGGACTTCAACCATTGGCCATCGC
CGTCGTCGGACGACGACGACAACGCCGCCTCCGATTGAGGCCCCAACGAC
ACGCACCTCGGTACCGCGACCCGCCCAGGAGGACCCAGATGTCTTCGTCA
CGACCATCCTCGTCAATCAGTGTTCACGAGCACCCCCAATGCGGCAGCCA
CGGTTGCCTCTGCGGCGGCGTGGGCTGTGGTGGGCTCTGCTGCCGGAGCG
GCTAGCGATAACGACGACCCGTCGTTGGTTGGAACGGTGCACGACCGTCC
CGAGGTTCGGGAGGATCTTCGCCAGCCCAAGCGCTCGCGGCGCTCGAGGG
AAGTGTCCCGGGTATGGACTTTTCCGCTGGGGCTGGGGGGGTGGTAGTGT
TTCCACCGTGATGCCGAGGTCAGAAGCGAGTCTTGATCGTGATGACGGCC
TCTGGAGACACAAAACCATCATGAGAACCGAAGAAGTTTCGCAACAGTGG
CGAGGAGAGTCGAAGTGCGCGGTCAAG
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protein sequence of Ec-00_005180.7

>Ec-00_005180.7 ID=Ec-00_005180.7|Name=Ec-00_005180.7|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=130bp
MMVVVVVVLQPPPLALSRAHRSCPHTAGVATTTKALAIAATASGTQPPTR
KPEVRRRRPWQSLERRLGTPRWCQSKRWQCRDWQPSSHRRRCGSCARSPG
LWSAAAPQLGWQVLRLWQACHGDGNRKTG*
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mRNA from alignment at chr_00:7885971..7893788+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_005180.7 ID=Ec-00_005180.7|Name=Ec-00_005180.7|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7818bp|location=Sequence derived from alignment at chr_00:7885971..7893788+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GCAGCAGCAGCAGCAGCATAATGCGCTAGCAAACGAAGGCGAGAAGGTTC
AATCATATCTATGGCGGGTTTCCCTACCACAATTGTGTGCTCTTGCACCT
CTGCGTTTCTTCTTTTTGTTTTCGTCGTTTTTGTCTGTGCTAACAGCTTC
GCTGCTCAAAACGCGAATACAACCCTTTTTTCTGTCGCCCGAGAGGCAAT
GACTATTGCCGTGGGGGTAGGATGCGCCCCGGTGGTCTAGTTGGTATCCT
CGAAACCTTCTAGAGGTCAGGTCAGGGGTTCGAATCCTGGCGTAAGCGAG
CTTTTCTTGCAAAGTGAGTTTTTCTCTCGCTTCCGCTTCTGGACTAGTGG
ATAGCGCTAGTTCGTGTGTACACAGAGGGAAGAGAGTGCTGAACTCTTCT
CGCATTAAAAATTGAAGGCGAAGTACCGCAGGAGGGGAGGGTAGAAAGGG
GCTCTTCTGTGTGACCACGGGTTGGAGTAAACGGCACTAGTGCTGTGAGC
GCTGATTTGAAGTGAAGACCAAAAAAACAAAAAAAAGGATCTATTATGTT
TCTTCATTTCAACAGGGACCCAAAACATCTCCAACACTGACATCGACAGC
CCCCACAAAGCAGGATAAAACACGTAACATGTTTCTCTTCGCTAATATTT
AGTCTAGACCTCCTGCGGGCAGGATGTGTAACAAGGTTGCATACCTCCCC
CTCCTTATGCTGCCTCAAACTATGATGCCAGTGTTGTCGCTTCCTGCTCT
GTTGTAGAGCACAGCAGTGTTGTCCCCATTGGCATGCGGTGGTGTGGAAT
TGAAAAATGGGGCTTTTCCCCTATGCTACAAGCACTGTCCTAGTTACTTC
CTCCTTTTCTCGGCACAGATACTAACGTCAGCGCCTCCAACAACAATTCA
GACGGCGACAGTAACGACTGCGAAAGCAACGATCCAAACAGCCTTGACAA
CAACAACCAGGACGCCGGAGCTGCCGCAACGGCAACAGGTAAGAACAGGG
TATCTGGGGTCACAAAAAACGAAGGAGTGCTCACTTGTATTTTAGACCGT
CCTTGATTTCTCATACGGTCAGGCTGACGACCAGCATTTGGTTCAACCCC
AAGATCATCGACCGGAGTCGATACCCCATGTTCCGTAACATGACACGCAG
GAGATGGCAGTTGTTTGATATGTTCTAAGCGAGACCGGCAGGTAGGAGCA
TGTCTCATCGGCGCACGTGGTAATGAGACGTGCAGCGCGCAGCCGAACCA
CGACGTTTCGAATCTTTGCACGGCAAGTGCTTAACATCCTTCCTTGTCCC
CAACTGTTTCTCCACGGTTGCTACTACCGCCATGCTGTACATGCGCAGAT
AATGCCGTCAACGCGGCCCATCCGAGGACGAAGCGGAAGAACCCTGAAAA
GGTCGATGATAAGGCCCGCTGCCCGATTTGCCAGGACCTCCTGCCGGAGG
AAAACAGAGGCATCGTGAAATGTGTGAGTGAAAAATCCGGCACGGGTGTG
TTTGTGTGGTTTGAATCCAAGGGGCGTGGTTGGCACACAGCAGGTAGAGA
GTTCCTTCCACGGAACGTCCCATTTACACAGCGGCAAGATTTCGCCCATT
AGTGCGGATGGGTGTGTGTCTAATCGCACGAGGAACGGTCTCATGGTCGA
AGGAGCGCAAGCAGGGAACACAAGACTACCAAACGAAGTCCATTCGAACA
ATTTAAAGTGCGAAATGTCGCCTCGGGGTTGAGCGAAGGGTCTCGAAGTG
GACCGCCTTCCTGGAGGAATACAGAGAGAAGCATCGTCAAAGCGCGAGCG
AATACAGTTAAACCCTCGGAGCCCAAGCAACACGAGTACGCAAGCGGCGT
TTCGCTGGTGGTCTAGCTGAGCATAGCACACGAAGCACCCCAGCACGGCA
GAGCGCATAGCGTAGCAAAAACGAACTGTTATACGGGTGCTACTGATTTG
GAGCGGAAGGTTGATCTGTGTCATATCAAAACTGAGCTACATGAAAAGGA
TTTTTCTGTTTTTTCCTGCTACGATCTCGTTTTGGTACTAGCGGTTTTGG
CCAGTTTTGCCACTGTTGGTGCAGTCTATTGGCTGCATTGCATGAAGCCT
TTGAAATCTTCACCCGAAAACCTCCGGACTATGCGATTGTTCATTGGCGC
ACGAAGCCACACACGTACAGGCCGCGGAACACGTCCGGGGTTTTCTGCCG
CTAGGGCCTTCAGCTGCGTATTGTTGTCTTTTTTTTTCAAGATGCTTCTC
TCTATGTACCACTTGCACTCCATTTCACTCAAACAGAGACAGCGGTTTCG
TGCAATGTGTGCGGTGATTCTGATGGTTGTTCTCTTCTTCTTGTTTTTCT
GTTGTCGGCCGCAGGGACACGTGTTCTGCTTGAAATGCGTTCTCCAGTGG
GTCAAGAAGCAGCAGAACAGCTGCCCAACATGCCGCGCGAAGGTGTGCCA
CATCAAGAAGACGCTCAGCTTGGCGGAGGCCCTAGAAAAGAATGTGAACA
CGGCTTAGAGAGTTTCATGTCAGCTGCGTCCACTGTTTCCGTTCTGTTTC
GTGTGCTTCGTAGTCACGTTCCCTCTGTCTGTTTTTTCCCTCAATGTTTA
TTTTATTGGATCCGACCGCCGCGCGGGTGTGGTGGTCGAGTTTCCTCGTG
GCTGTTGCAACAGCGAGCGGTTCCATTCCCCCCCCCTCTAATCGAAAGCC
ACTTACCCAACGAAGATGTTTTGGGTGTATTCTTTGTGTTTTTTGGGGAT
AGATTTGCTAAAACATGTTCTCTATGTGTTAGTCTTTGATCGAAAAACCC
ATATGAATTGAACCCAGAATTTACCATGCCTACATATCTCTCAAAATCGA
TACGCACATTATTTTGTTCGGACGGTCATTGTTTTTGGTTGGTTGGTGTG
CAGCATTGCAGCGCCTGCTGTTTACACCGGGTGCCTATTTAGCACCTGCC
TGTCAACTAACTGCATACCACTGGCGTCTCATGCAATTTTTTTCACTTGT
TCGTCGTCGATTGTTCTTGTCCTTTCCGTGCAATTTTCTCGGGTGGTCAA
TCCGCGGGGCAGGCTAACCGGAAACCTCTGACGAAAGCCCAGCTGAAGAG
GACGAAGAGGAAGTCTACTATCGGCAAGCCCTTCCCGGTGAGCCTTCCTT
TCCACAGAAAAAAAGGTTGCGTTAGCTTTGATCGGGCGGCTTGAGATCTC
CCGAATCGCCGGAAGACTTCGTTATCATCCCACGGTAGTCACTGACATTA
CAGTATCTTAAGGTTGACAACAACTGCAGTGCTGTAAATTGTCGCAGCAG
GACATGTTGATAGGCTTTTGAGTCATTTGTCTTGCGGCCTATCACACGCG
TGTTATTCACGTTGCGGATACAGCATTTCGACGGAAGGATTTCATCTGAG
CAAAACAGGAGACCTTGTCTTCCCACCTTGCCTCCTTCCTCTTATTTGAC
GATGGTCAAGAAGCACGCGCTCACCGACTGGCAGGGGTATAGATGGCAGT
GCGCGCCCATACAGCGAAAGCGACGTTCTCCAGCAGTTGAACAAGGGTCA
CGTAGTAGGAGGAAGGACAAAACAGGAGGAGCTCCGTCGAGTTTTTTTTT
AACCCTCAGCCCAAATTTTGTACTCTCCAAGTGTCGGAGTGGTGTTAAAC
GCCGTCCCCTCGAGTTCCCGTCGCCAACGGCGACAGCATTGCTGGCGGTC
GCCCTGCTGCTGCCGTACCGATGATGCCCCGTGCTGTTGTTGTTGCCGCT
GATGGGTATACTACACCGGGCATCGAGCGCAGAAGCCCGACATCACGACC
GAGAAGATTCGCGTCCACAAGAAGGTTAGCCGGGAACAAATCAGGCAGAA
CGCCATGGCGCCACACCCTCAGGTGAGGGGGAGACAGCCCCAGAGGCCGT
CCCACTCACCGCCTCCCGGGTCTTGATCGGATCGACTCTTCCGCTCTTCC
GCCGGAGCGCTGCCTACAGCGTTTGCGCTCCAAAAAACACCTCTCTGACC
CTAATGGTTTGTTACTTTCCCATGCGTTTTTCGCTCATCATGCTTGAGGC
ATGCATCACCACACGAAAAAGGAGAATTGTGCGCGGTTCTCAATACCACG
GGCTCGGGTAAACTTACATGAGATCGATGCCGTAACCAAAACATATTTGA
GCCTTAGGCTCCACCGAGACCGGTTATAATTTCTACGGTGCGAACGGACG
TGTACAATCTCTAGCGTGCGCGCCAGCGTTATTATAGTGCCAAACAGAGA
GCGTGCCCCGACGTCGGGAAAATCAAAAGACCCACAAACCCCGGTTGTGA
ACTCCCGATATCGGGAGTTTCCTAGGGTCCAATACGGCGCCAACTTGTGT
ACTTTCATATGAATCGCAGAGGAGGCTTTCTGCGCCCCCTTGAAGCGGGG
GATTTTCGGCTGAGAAGGCACGGGCGAGGGCAAGCAAGATATTGCGAGGG
AGGCAGGAGTAAGAGTAGCAGCAAAGAAAATTCTACTCTAGGGCGACAAG
ATTGCGCTACCTGACACGCACATCGCTCGTCCTTCTTCTTGAGACAGGCG
CCAGGGGGGTTCCTGCACGCGCAGGAGCAGGCGGAGGCGGCAGCGGAAGC
GGCACAGGCGGTGCCTGACGCACAGCCAGACCAGGTGGGGGGTAATAGCA
AAGGCTTGAAGCTTCGGTAGCGTTATGTAGGGCATGCTGTTGGCATTGGC
CGTCTGTTGGAGGCGCCATAGATGACGTCGGGAAATTCTGCTCGCAGTCC
CCTTTTGTCGCGGCAATCGTTTCCGTGTGCCCCCGTCCTTTTCTCCGCGG
CAGCCGTTTCCATCACCACCCCCTTCCTCTTCCCCCTCCCACCCGACCCC
CCACCGCCCCCCTCCGCCGGAAATCCAACACCAGGTGGAAGCCATCGTGG
ACCAACAGGTAGCCATCGCGGTGTTCTCGAGTTCCCCCCCCCCTCCCCCT
GCTACCCCGCAAGTTCCCTCGCCCCTGCCGCCGTCGTCGCCGCGTTCTCT
TGCGACGGACCTTGAAGACCGGCGGGTAGCGATCGAGGCCGACCGCCGGG
CGTTGTTGGAGTCTACCTCAGCTTTCAGGGGGCACCGCAGCGTCGGCGGG
GGGTCCTACGTTGGAGGAGCCGGGGGGGCGAGGTCGATTGGTGACAGCGG
AGGCGGGGTCGGTGACCGTGTCGGCGAGGCAAGCCTTGACGTGAGAGTGG
AAAACAACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGTCGGTGGT
CGCGGATGGAGATCGACTGTGAACATAGGCAACAGCAGCAGCGGCGTCAG
CAGCGACGGGGGTGGGGATGGCTCTGGAAACAGTGACGCGGACAACAGCA
ACAGCAGGAACAACGCCGGCGTGCGCACCGGCGGGGCGGCAGAAGCCGCG
GCCCAAGAATCTAGCTCGAATCGTGACGTGCAAGGAGCAGCGACATCGAG
CGGCGGAGACAACCTCGACCATGACGACGACGACGACGATGGTACGGGTG
ACGGCGTCGGCAACATCACCACGCTCGGGCACTTGCTGTCGGTCTTGGGC
AGCCGTAGGATAAGGGTGTCACCAAACGGTGGTATTGGTGGTATTGATGA
TGGTGGTGGTGGTGGTGGTATTGCAGCCGCCGCCCCTAGCTCTGTCCCGT
GCTCACCGCTCCTGCCCTCATACAGCAGGCGTAGCAACAACAACAAAAGC
ATTAGCAATAGCAGCCACGGCGTCGGGAACCCAGCCACCGACCCGGAAAC
CAGAAGTGCGGCGCAGGCGGCCATGGCAGTCTCTCGAGCGGCGTCTCGGT
ACACCTCGCTGGTGCCAGAGCAAGCGTTGGCAGTGCAGGGACTGGCAGCC
CTCGAGTCATCGCCGACGCTGCGGCAGCTGCGCGCGGTCGCCAGGCTTGT
GGTCGGCGGCAGCGCCTCAGCTGGGATGGCAGGTGCTCCGGCTCTGGCAA
GCGTGTCACGGAGACGGCAACCGCAAGACGGGTTAGGACAAGAGAGCAGA
CAAGACCGGGACGACGAAGCAGGCGTGTTTGGGAGGCGAGACGGCGGGAA
AAGCAACGGCGAGGAACGGGGTAACTTGCTTCCAAGGATCGACAACGACG
ACAACCGCAGCGACAACATCAGCAGCAGAGGCGGCGGCAACGGGTCTGAG
GAAGAGCCCTGTGTCGAACCCGCCTCTCGACGCACAGCGGTGGGGGAGAG
GGACGTCAGTGAGTCAACAATTTTGGTGCAGCAGCGTTTGGCCTAAAACA
TTTCGACCAAAGCAAACGACGACAACCCGTTGTACAAGCGATTAGGTTAG
CAATCATGCCTTCCTTTTCCCCTACGGGTCGTCTTGCATGCAGGCCACAC
GGAAGAGCGCGACGAGTTCGCGTTTCCAGGAAGGAACGACAACGACACTA
CTGCGGTGAGTTTTTTTTGCGCTTTTAGGCGAGTCGAGCACAATGAATGC
TTTCGGCAGTCGTTCAAAGGAAACATGACATGATTCCCACCCCACAACAT
TTCAACTGAGATCGGACGATGTCGTTGCCGAATGTGACTTTTTTCTCGAA
TGCCTGCCTTGCTGATGGGTTTCAAGTATGTCGTGGACAGTCTTGAGGCG
TTTCTCCGAAATGCCTCGCACAACGAACCACATACATACATTTTGATGCC
ATCACGGACCAACTTGAAACACCGAAACCAAAACGTAGCATCTTCCCCTG
ACGGGCTCCTCGCGCCAGGGAGGAACCACCGGCTCGGCTTCTCCCATCCT
CAGCGACTCTTCGGCTACCGTTGCCTGCGGCTCTTCGACGTCCATCCCCG
AAAGCTTTGCGCACACATCCGGCAATGACGCTGCCCCCAGCGGCTCCATC
AACGACGGCGCAAACACTGCTGTTGCCGGCGCTGAAGATGCCTGTGGTGG
CGACGCCGATGGTGCCGGGGTAGCAGGTAGTGACCATGCTGGTGGAGGTA
TCAGTGTTAGCGCGAATGGCGCTGCAGGACCTGGTGGAGTTGCGATCAAC
TCCGGCAGGGTCCACTCGAGCCCCCTCAGCAGCAACAACAACAATAACAA
CAACAACACCTGCAGCTACCTGACGTGGCTAGAATCTAGGTCGGACTTCA
ACCATTGGCCATCGCCGTCGTCGGACGACGACGACAACGCCGCCTCCGAT
TGAGGCCCCAACGACACGCACCTCGGTACCGCGACCCGCCCAGGAGGACC
CAGATGTCTTCGTCACGACCATCCTCGTCAATCAGTGTTCACGAGCACCC
CCAATGCGGCAGCCACGGTTGCCTCTGCGGCGGCGTGGGCTGTGGTGGGC
TCTGCTGCCGGAGCGGCTAGCGATAACGACGACCCGTCGTTGGTTGGAAC
GGTGCACGACCGTCCCGAGGTTCGGGAGGATCTTCGCCAGCCCAAGCGCT
CGCGGCGCTCGAGGGAAGTGTCCCGGGTATGGACTTTTCCGCTGGGGCTG
GGGGGGTGGTAGTGTTTCCACCGTGATGCCGAGGTCAGAAGCGAGTCTTG
ATCGTGATGACGGCCTCTGGAGACACAAAACCATCATGAGAACCGAAGAA
GTTTCGCAACAGTGGCGAGGAGGTGCGCAATAGAGTCCTTGTGGCTTGGT
GCGCGGGGATGTGTCAAGACGGTGGGGTCAGGGCTCGCGCGGTTTCTCTT
CCGACTGTCATAGGGAGAGTTCTGCTGAAACGTCAATCAGGCGGATCAGT
TCAGTAGGTGCCGGCATCGAGAGTGGCTGCCTTTCCCCAGCCTGTCTTTT
TTTGATACTTGGTTCAAACTTAACTACTGCTGTACTGTTGTCCATTAGAG
TCGAAGTGCGCGGTCAAG
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Coding sequence (CDS) from alignment at chr_00:7885971..7893788+

>Ec-00_005180.7 ID=Ec-00_005180.7|Name=Ec-00_005180.7|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=390bp|location=Sequence derived from alignment at chr_00:7885971..7893788+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGGTGGTGGTGGTGGTGGTATTGCAGCCGCCGCCCCTAGCTCTGTC
CCGTGCTCACCGCTCCTGCCCTCATACAGCAGGCGTAGCAACAACAACAA
AAGCATTAGCAATAGCAGCCACGGCGTCGGGAACCCAGCCACCGACCCGG
AAACCAGAAGTGCGGCGCAGGCGGCCATGGCAGTCTCTCGAGCGGCGTCT
CGGTACACCTCGCTGGTGCCAGAGCAAGCGTTGGCAGTGCAGGGACTGGC
AGCCCTCGAGTCATCGCCGACGCTGCGGCAGCTGCGCGCGGTCGCCAGGC
TTGTGGTCGGCGGCAGCGCCTCAGCTGGGATGGCAGGTGCTCCGGCTCTG
GCAAGCGTGTCACGGAGACGGCAACCGCAAGACGGGTTAG
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Synonyms
The feature 'Ec-00_005180.7' has the following synonyms
Synonym
Esi0409_0009
Esi_0409_0009