Ec-00_004290.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004290.1
Unique Name	Ec-00_004290.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	448

Homology

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BLAST of Ec-00_004290.1 vs. uniprot
Match: D7FYH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYH6_ECTSI)

HSP 1 Score: 723 bits (1867), Expect = 9.270e-260
Identity = 375/399 (93.98%), Postives = 375/399 (93.98%), Query Frame = 1

Query:  232 MHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLM--------------AATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGART----------QEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGEGRHRILNGFRPDMAMLDESAKELLEERREALETLRESERQALS 1356
            MHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLM              AATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGART          QEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGEGRHRILNGFRPDMAMLDESAKELLEERREALETLRESERQALS
Sbjct:    1 MHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMVTERKISPVLMNDEAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTPLSGDVSLPQQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGEGRHRILNGFRPDMAMLDESAKELLEERREALETLRESERQALS 399

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BLAST of Ec-00_004290.1 vs. uniprot
Match: A0A8K1FKE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKE5_PYTOL)

HSP 1 Score: 285 bits (730), Expect = 1.740e-88
Identity = 175/388 (45.10%), Postives = 232/388 (59.79%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVEC-GEGRHRILNGFRPD---MAMLDESAKELLEERREALETL 1329
            V ++G AGQIAY+L+PL+ +G VFG  R+V LRLLDI     AL+G  ME+QDC  +LV  V+ TSD EVAFK ADVA+L+GGFPR  GMER+DLI KNV I    G+A+ + A   ++VLVVANPA TNCL+A  +APSIPR +FS+L RLD +RL + L E +         + G  TQ      +V TR       +    VR   +WGNHS T  PD +  E  +DG+  PL T +                         D AW   I + LV  V++RG  VI+AR  SSA+SAA AI  HL+DWL  S  G +  VSM + S GN YGVP+ +++SFPV+C G G + ++NG   D    AM++ +A+EL EE+ +A+E L
Sbjct:    6 VVVSGAAGQIAYSLLPLICNGLVFGAERRVELRLLDIPMAAEALEGVKMELQDCAYNLVDAVIPTSDLEVAFKDADVAILVGGFPRKQGMERKDLIEKNVTIFKAQGQAIERFASRDIKVLVVANPANTNCLIAMENAPSIPRKNFSALTRLDHERLRSFLVERV---------NAGFSTQ------SVTTR-------ITSKDVRRCIIWGNHSSTQVPDCTNVEVTVDGKTQPLSTFVN------------------------DKAW---IEDQLVKDVQQRGAAVIKARKLSSAMSAAAAIGAHLRDWLGGSVQGEY--VSMAIPSAGNKYGVPEGLIYSFPVKCLGNGEYEVVNGLPIDERTKAMMEATAQELTEEKNDAVEIL 342

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BLAST of Ec-00_004290.1 vs. uniprot
Match: A0A7S2UWU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWU3_9STRA)

HSP 1 Score: 273 bits (698), Expect = 3.030e-83
Identity = 162/385 (42.08%), Postives = 216/385 (56.10%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGEGRHRILNGFRP-DMAMLDESAKELLEERREALETL 1329
            VA+TGGAGQIAY+L+P + +G +FG    ++L +LDI   V +L+G  MEIQD    LV ++V T+DP VAFK ADVA+L+GGFPR  GMER+D+I KN  IM  HG A+       V++LVVANPA TN LM +  AP +P  + + L RLD DRL  +L E +  +E   + SG     +                      VR   +WGNHS T +PD  G E +I G W  +   +                  DG           W+S  L P V++RG ++I AR  SSA+SAA+AI NHL+DWL  +  G H  VSMGV SDGNPYG+ + ++FSFPV C  G    ++GF   +  M++ +A EL EER  A E L
Sbjct:   38 VALTGGAGQIAYSLIPHICNGAIFGSSTLIKLHILDIPQAVDSLRGVKMEIQDSGLPLVVDIVTTTDPTVAFKDADVAILVGGFPRKKGMERKDMIEKNADIMKMHGEAIQAVGSSDVKILVVANPANTNALMISKFAPKVPAKNITCLTRLDHDRLHGLLVEKI--KEQGVEGSGNVTLDQ----------------------VRNGIIWGNHSATQYPDYRGCEVQIGGTWKKVADLIT-----------------DGA----------WLSGGLTPLVQKRGAEIINARKLSSAMSAASAIKNHLRDWLFDTPEGVH--VSMGVMSDGNPYGIEEGLMFSFPVRCRGGEWEFVSGFTDLNQEMINSTAAELKEERALAGEIL 369

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BLAST of Ec-00_004290.1 vs. uniprot
Match: A0A835YXR8_9STRA (Malate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR8_9STRA)

HSP 1 Score: 271 bits (693), Expect = 6.300e-83
Identity = 170/388 (43.81%), Postives = 217/388 (55.93%), Query Frame = 1

Query:  172 VCVAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWL---HSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGEGRHRILNGFRPDM---AMLDESAKELLEERREA 1317
            V V +TGGAGQIAY+L+P +  G +FG    V LRLLDIE    AL+G  MEIQD   DL+  V+AT+D   AFK   VAVLLGGFPR  GMER+DLI KNV IM  HG+AL + A    +V+VVANPA TNCL+A   APSI  ++FS+L RLD DRL  MLA  +                            +++  ++    +R   +WGNHS +  PD + AEA ++G+W                   ++P   D            W+ + LVPAV+ RG  VI AR  SSALSAANA+A HL+DW+    SST+G    VSM V SDGNPYG+P+ +VFSFPV    G+  I+ G         +LD +  ELL ER  A
Sbjct:    5 VRVVVTGGAGQIAYSLIPHICKGLIFGPSTMVDLRLLDIEPAKDALKGVVMEIQDSAYDLMASVMATTDVAQAFKDVQVAVLLGGFPRKQGMERQDLIEKNVQIMRLHGQALEQHADRNCKVVVVANPANTNCLVAMKYAPSISPANFSALTRLDHDRLRGMLAAKVT---------------------------EKSHHKISAKDIRNCVIWGNHSSSQVPDATHAEALVEGKWQ-----------------AIAPLCNDP----------QWLEKELVPAVQNRGAAVIAARKLSSALSAANAVACHLRDWVGVTSSSTTGDGMFVSMAVISDGNPYGIPEGLVFSFPVASSNGKCEIVQGLSISTHVRELLDATVAELLAEREMA 338

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BLAST of Ec-00_004290.1 vs. uniprot
Match: W2NFM1_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2NFM1_PHYPR)

HSP 1 Score: 270 bits (689), Expect = 1.650e-82
Identity = 167/389 (42.93%), Postives = 223/389 (57.33%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVEC-GEGRHRILNGF----RPDMAMLDESAKELLEERREALETL 1329
            + ++G AGQIAY+L+PL+  G +FG  ++V LRLLDIE    AL+G  ME+QDC  +LV  ++ T+D E AFK ADVA+L+GGFPR  GM+R+DLI KNV I    G A+ K A   V+VLVVANPA TNCL+A  +APSIPR +FS+L RLD +RL + L E +   ++ + TS                             V  V +WGNHS T  PDV+ AE K                               G A D   +  DW+ + LV  V+ERG  +I+AR  SSA+SAA AI  HL+DW   S  G    VSM + SDGN YGVP+ +++SFPV+C G G + ++NG     R D AM+  +A+EL EE+ +A+E L
Sbjct:    6 IVVSGAAGQIAYSLLPLICIGHIFGPNQRVELRLLDIEPAQEALEGVKMELQDCAFNLVDAIIPTADLETAFKDADVAILVGGFPRKQGMQRKDLIEKNVAIFKAQGAAIDKFASRDVKVLVVANPANTNCLIAMENAPSIPRRNFSALTRLDHERLRSFLVEKVNETQSTKVTS---------------------------KDVNKVVIWGNHSSTQVPDVTNAEVK-------------------------------GQAFDKIVSDKDWVEKKLVKDVQERGAAIIKARKLSSAMSAAAAIGAHLRDWFTGSKDGEF--VSMAICSDGNKYGVPEGLIYSFPVKCAGNGAYEVVNGLPISPRID-AMMKATAQELTEEKADAVEIL 333

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BLAST of Ec-00_004290.1 vs. uniprot
Match: H3G9V6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9V6_PHYRM)

HSP 1 Score: 268 bits (685), Expect = 7.860e-82
Identity = 172/391 (43.99%), Postives = 225/391 (57.54%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHD--WISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVEC-GEGRHRILNGF----RPDMAMLDESAKELLEERREALETL 1329
            + ++G AGQIAY+L+PLL  G VFG  ++V LRLLDI     AL+G  ME+QDC  +LV  ++ T+D EVAFK ADVA+L+GGFPR  GM+R+DLI KNV I    G A+ + A   V+VLVVANPA TNCL+A  +APSIPR +FS+L RLD +RL + L E                         V   Q   +   +   V  V +WGNHS T  PDV+ AE  + G       A Q +                     LD    D  WI +TLV  V+ERG  +I+AR  SSA+SAA AI  HL+DW   S  G    VSM + SDGN YGVP+ +++SFPV+C G+G + ++NG     R D AM+  +AKEL EE+ +A+E L
Sbjct:    6 IVVSGAAGQIAYSLLPLLCIGHVFGPEQRVELRLLDIAPAQEALEGVKMELQDCAFNLVDAIIPTADLEVAFKDADVAILVGGFPRKQGMQRKDLIEKNVAIFKAQGAAIEQFASRNVKVLVVANPANTNCLIAMENAPSIPRRNFSALTRLDHERLRSFLVEK------------------------VNATQSHKVTAKD---VTKVVIWGNHSSTQVPDVTYAEVALPG-------AAQSE--------------------PLDKLVTDRNWIEQTLVKDVQERGAAIIKARKLSSAMSAAAAIGAHLRDWFKGSKDGEL--VSMAICSDGNKYGVPEGLIYSFPVKCTGDGAYEVVNGLPISPRID-AMMKATAKELSEEKADAVEIL 339

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BLAST of Ec-00_004290.1 vs. uniprot
Match: A0A3R7KHN2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KHN2_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.720e-80
Identity = 169/389 (43.44%), Postives = 221/389 (56.81%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVEC-GEGRHRILNGF----RPDMAMLDESAKELLEERREALETL 1329
            + ++G AGQIAY+L+PL+  G VFG  + V LRLLDI     AL+G  ME+QDC  +LV  ++ TSD EVAFK  DVA+L+GGFPR  GM+R+DLI KNV I    G A+ K A   V+VLVVANPA TNCL+A  +APSIPR +FS+L RLD +RL + L E                         V  +Q   +   +   V    +WGNHS T  PDVS AE K+                  N T       E  T    D+   DWI   LV  V+ERG  +I+AR  SSA+SAA AI  H++DW + S  G +   SM + SDGN YGVP+ +++SFPV+C G G + ++NG     R D AM+  +A EL EE+ +A+E L
Sbjct:    6 IVVSGAAGQIAYSLLPLICIGHVFGPNQHVELRLLDIPPAQEALEGVKMELQDCAFNLVDAIIPTSDLEVAFKEVDVAILVGGFPRKQGMQRKDLIEKNVTIFKAQGGAIEKFASRNVKVLVVANPANTNCLIAMENAPSIPRKNFSALTRLDHERLRSFLVEK------------------------VNEKQSNKVTSKD---VTKCIIWGNHSSTQVPDVSYAEVKLS-----------------NATNA-----EPLTKFVTDA---DWIENKLVKDVQERGAAIIKARKLSSAMSAAAAIGAHVRDWFNGSKDGEYT--SMAICSDGNKYGVPEGLIYSFPVKCTGAGAYEVINGLPISPRID-AMMKATATELTEEKADAMEIL 339

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BLAST of Ec-00_004290.1 vs. uniprot
Match: K3WQW7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQW7_GLOUD)

HSP 1 Score: 264 bits (674), Expect = 3.410e-80
Identity = 172/390 (44.10%), Postives = 219/390 (56.15%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAG--VSMGVFSDGNPYGVPDDVVFSFPVEC-GEGRHRILNGFRPDM---AMLDESAKELLEERREALETL 1329
            + ++G AGQIAY+L+PL+  G VFG  R+V LRLLDI     AL+G  ME+QDC  +LV E+  TSD E+AFK  DVA+L+GGFPR  GM+R+DLI KNV I    G A+ K A   V+VLVVANPA TNCL+A  +APSIPR +FS+L RLD +RL + L E +         SG   T +                      VR   +WGNHS T  PDVS  +       VP   A Q           LS    D           DWI   LV  V+ERG  +I+AR  SSA+SAA A+  HL+DW     SGT  G  VSM + SDGN YGVP+ +++SFPV C G G++ ++ G        AM+  +A+EL EER +A E L
Sbjct:    7 IVVSGAAGQIAYSLLPLICIGHVFGPTRRVSLRLLDIPVAQEALEGVKMELQDCAFNLVDEITPTSDLELAFKDVDVAILVGGFPRKQGMQRKDLIEKNVTIFKAQGEAIEKYASRDVKVLVVANPANTNCLIAMENAPSIPRHNFSALTRLDHERLRSFLVERV-------NASGNTVTSKD---------------------VRKCIIWGNHSSTQVPDVSFVDVH-----VPSAAAPQP----------LSAFVNDA----------DWIENKLVKDVQERGAAIIKARKLSSAMSAAAAVGAHLRDWF----SGTKEGEFVSMAICSDGNKYGVPEGLIYSFPVTCSGNGKYEVVQGLATTPRIEAMMKATAQELQEERADAQEIL 339

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BLAST of Ec-00_004290.1 vs. uniprot
Match: A0A097IUK3_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUK3_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 5.660e-80
Identity = 176/388 (45.36%), Postives = 226/388 (58.25%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTE-VVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGE--GRHRILNGFRPDMAMLDESAKEL------LEERRE 1314
            V +TGGAGQIAY+L+PL+  G VFG   +V LRLLDI     AL+   MEIQD       E V+ T+D   AF+GA VA+LLGGFPR PGMER  L+AKNV IM   G+ L + A    + LVVANPA TNCL+ A +APS+PR +FS L+RLD +R+  ML E   S       + G  +      HAVR+ +      L    VRG+ +WGNHS +  PD S  E  ++G WVP QT L     L           +D  A    +   D++SE    AVR RG  ++ AR  SSA+SAANA A HL DWL S  +G    VSMGVFSDGNP+GVP+ +V SFPV+CG+  G +R    F  D  + ++ +++L      LEE RE
Sbjct:    6 VVVTGGAGQIAYSLIPLIARGLVFGPATRVHLRLLDIPPAAQALEAIVMEIQDSLFPTALEGVLGTTDEVRAFEGAQVAILLGGFPRKPGMERGQLMAKNVGIMKRMGQLLERHASRDCKALVVANPAATNCLVLAANAPSLPRKNFSFLSRLDHERMVGMLLEKANSV-----LAAGTAS------HAVRSER------LRPADVRGLCIWGNHSDSQVPDASSVEFCLNGNWVPAQTILGDSPWL---------KLQDANAV-AGAGGGDYLSE----AVRNRGAVILAARKLSSAMSAANATAAHLGDWLCSPPTGKT--VSMGVFSDGNPFGVPEGLVCSFPVQCGDLSGANRGGWNFDSDFRLTEDVSRQLAVSVAELEEERE 360

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BLAST of Ec-00_004290.1 vs. uniprot
Match: A0A097IUM0_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM0_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.330e-79
Identity = 175/371 (47.17%), Postives = 214/371 (57.68%), Query Frame = 1

Query:  178 VAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDC-NSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHFSSLARLDQDRLSAMLAE--NLCSEETLEQTSGGARTQEPERQHAVRTRQDRNILQLEGPG-VRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWL-------HSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVEC-GEGRHRILNGF 1254
            V +TGGAGQIAY+L+PL+  G VFG G +V LRLLDI     AL+G AME+QD   S ++  ++AT+D   AF GA VA+LLGGFPR PGMER DLI KN  IM   G AL + A    +V+VVANPA TNC++ A+ APSIPR + S L+RLD DR++ ML    N C    L  T  G  T         R         L GP  +RGV VWGNHS +  PD S  E ++DGRW P+ + + RD      T  L+ +       D D      +   L  AVR RG  V+ AR  SSA+SAANAIA+HL DWL         S  G  A VSMGV SDGNP+GVP+ +  SFPV C G G      GF
Sbjct:    6 VVVTGGAGQIAYSLIPLIARGVVFGPGTRVNLRLLDIPPSAKALEGVAMEVQDSLYSTVLDGLLATTDEARAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHANRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMAGMLLHEANRC----LSGTPHGPPTGXXXXXXXRRP--------LLGPADIRGVCVWGNHSNSQVPDASAVEFRVDGRWTPVSSVI-RD------TAWLNLSGSGHERLDADGE----VVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVAPVQAGSGSDGGKVAVVSMGVMSDGNPFGVPEGLFCSFPVRCTGNGEWAFDEGF 353

The following BLAST results are available for this feature:

BLAST of Ec-00_004290.1 vs. uniprot

BLAST of Ec-00_004290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYH6_ECTSI	9.270e-260	93.98	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A8K1FKE5_PYTOL	1.740e-88	45.10	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S2UWU3_9STRA	3.030e-83	42.08	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835YXR8_9STRA	6.300e-83	43.81	Malate dehydrogenase n=1 Tax=Tribonema minus TaxID...	[more]
W2NFM1_PHYPR	1.650e-82	42.93	Uncharacterized protein n=13 Tax=Phytophthora TaxI...	[more]
H3G9V6_PHYRM	7.860e-82	43.99	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A3R7KHN2_9STRA	1.720e-80	43.44	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
K3WQW7_GLOUD	3.410e-80	44.10	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A097IUK3_9PHAE	5.660e-80	45.36	Malate dehydrogenase n=1 Tax=Dictyopteris undulata...	[more]
A0A097IUM0_9PHAE	1.330e-79	47.17	Malate dehydrogenase n=1 Tax=Punctaria latifolia T...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:5738853..5745528 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	725.3
Seed ortholog evalue	1.7e-206
Seed eggNOG ortholog	2880.D7FYH6
Length	1649
KEGG rclass	RC00031
KEGG ko	ko:K00025,ko:K00026
KEGG Reaction	R00342,R07136
KEGG Pathway	ko00020,ko00270,ko00620,ko00630,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04964,map00020,map00270,map00620,map00630,map00710,map01100,map01110,map01120,map01130,map01200,map04964
KEGG Module	M00009,M00011,M00012,M00168,M00171
Hectar predicted targeting category	signal peptide
Gene id	Ec-00_004290.1
EggNOG free text desc.	malate metabolic process
EggNOG OGs	COG0039@1,KOG1496@2759
EC	1.1.1.37
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004290	Ec-00_004290	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 5738853..5745529 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004290.1	Ec-00_004290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 5739142..5745512 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004290.1.8	Ec-00_004290.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5738853..5739272 -
Ec-00_004290.1.7	Ec-00_004290.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5739986..5740185 -
Ec-00_004290.1.6	Ec-00_004290.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5741891..5742201 -
Ec-00_004290.1.5	Ec-00_004290.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5742620..5742760 -
Ec-00_004290.1.4	Ec-00_004290.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5743189..5743323 -
Ec-00_004290.1.3	Ec-00_004290.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5743602..5743691 -
Ec-00_004290.1.2	Ec-00_004290.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5744346..5744601 -
Ec-00_004290.1.1	Ec-00_004290.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 5745433..5745528 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004290	3UTR:Ec-00_004290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 5738853..5739141 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004290.1	CDS:Ec-00_004290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 5739142..5739272 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004290	5UTR:Ec-00_004290.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 5745513..5745528 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:5738853..5745528-
coding sequence from alignment at chr_00:5738853..5745528-

mRNA sequence

>Ec-00_004290.1 ID=Ec-00_004290.1|Name=Ec-00_004290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=448bp
MRLFALFWGTALAFVTQDTPVGVSSHSYQPTAAVHGTSSNPRRSSPLSEQ
GDVCVAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQG
FAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLI
AKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHF
SSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRN
ILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGL
PNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSS
ALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPV
ECGEGRHRILNGFRPDMAMLDESAKELLEERREALETLRESERQALS*

spliced messenger RNA

>Ec-00_004290.1 ID=Ec-00_004290.1|Name=Ec-00_004290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1649bp|location=Sequence derived from alignment at chr_00:5738853..5745528- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCGACGACCGTAGTGATGCGGCTGTTCGCGCTCTTTTGGGGGACGGCGC
TTGCGTTTGTGACCCAAGATACTCCTGTCGGTGTCTCCAGTCACAGCTAC
CAACCGACAGCGGCGGTTCACGGCACCTCTTCGAACCCAAGGCGGTCATC
TCCACTATCTGAACAAGGTGATGTGTGTGTCGCCATTACCGGGGGTGCGG
GTCAAATAGCTTACGCCCTCGTGCCACTCCTCATGCACGGCCGCGTGTTC
GGGGAAGGTCGCAAAGTCAGGCTACGACTTCTAGACATCGAGGCGTGCGT
CGGGGCTCTGCAAGGTTTCGCCATGGAAATTCAAGACTGCAATTCCGACC
TGGTGACAGAAGTTGTTGCTACAAGCGATCCGGAGGTGGCGTTCAAGGGG
GCCGACGTGGCTGTCCTCCTCGGAGGGTTTCCGCGGCTGCCGGGTATGGA
GCGTCGGGATCTGATAGCCAAGAATGTGCCGATCATGGCCGAGCACGGCA
GAGCCCTCGCGAAGTGTGCGAAGGACGGGGTCAGGGTGCTTGTAGTGGCC
AACCCGGCATGCACAAACTGTCTCATGGCCGCCACCAGCGCGCCATCCAT
TCCGCGCAGTCACTTCAGCAGCCTCGCCCGCTTGGACCAGGATCGCTTGT
CGGCGATGTTGGCGGAAAACCTCTGTTCAGAAGAAACTCTGGAACAGACT
TCAGGGGGAGCACGTACGCAAGAGCCGGAGAGGCAGCACGCCGTTCGCAC
GAGGCAAGACAGAAATATCCTCCAGCTCGAGGGGCCAGGCGTTCGCGGGG
TGTATGTATGGGGCAATCACAGCCCCACCATGTGGCCCGACGTGTCTGGA
GCGGAGGCAAAAATTGACGGCCGGTGGGTACCGTTGCAGACTGCTCTGCA
ACGAGACGGTGGACTTCCAAATGGGACGGGACTGTTGTCTCCTGCTCGTG
AAGATGGTACGGCACCGGACTTGGATTCGGCCTGGCACGATTGGATATCT
GAAACGCTTGTCCCGGCAGTGCGCGAAAGGGGTACGAAAGTGATCGAGGC
CAGAGGGAAATCAAGCGCCCTCTCCGCCGCAAACGCCATCGCAAACCACC
TCAAGGACTGGTTGCATTCTTCGACAAGTGGGACGCATGCCGGTGTATCG
ATGGGCGTGTTTTCAGATGGAAACCCATATGGTGTCCCGGACGACGTTGT
CTTCTCGTTTCCTGTCGAGTGCGGAGAAGGTCGACATCGGATCTTGAACG
GGTTTCGCCCCGACATGGCAATGCTGGATGAATCTGCGAAGGAACTTCTT
GAAGAGCGGCGAGAAGCACTCGAAACGTTGCGAGAATCGGAAAGACAGGC
TTTGTCGTAGTTCGCTGGAGTTGTGGATGTTCTGTACTTCTCGCCACGTA
CACCCTGTCACGGCAGCTACACAGGAATCGGATACGTACACATTGAGCAG
CTCCAAGGATAGACAGGCCTTGGCTGCAATGAAAATATGACGACGACCTT
GGACGACCGGGAATATAGCTTCGGAACACCCAACAAATGCGAGTGCTCGC
GTTGCTTGTATTGCTACTGAAACAAGTATCAACAGCGTGTCTCTTGCTTG
CCACGTTCAAAAGTGACGAACTGAGCTACTCACGCAAATGTAACGCGCG

protein sequence of Ec-00_004290.1

>Ec-00_004290.1 ID=Ec-00_004290.1|Name=Ec-00_004290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=448bp
MRLFALFWGTALAFVTQDTPVGVSSHSYQPTAAVHGTSSNPRRSSPLSEQ
GDVCVAITGGAGQIAYALVPLLMHGRVFGEGRKVRLRLLDIEACVGALQG
FAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLI
AKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMAATSAPSIPRSHF
SSLARLDQDRLSAMLAENLCSEETLEQTSGGARTQEPERQHAVRTRQDRN
ILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGL
PNGTGLLSPAREDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSS
ALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPV
ECGEGRHRILNGFRPDMAMLDESAKELLEERREALETLRESERQALS*

mRNA from alignment at chr_00:5738853..5745528-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004290.1 ID=Ec-00_004290.1|Name=Ec-00_004290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6676bp|location=Sequence derived from alignment at chr_00:5738853..5745528- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCGACGACCGTAGTGATGCGGCTGTTCGCGCTCTTTTGGGGGACGGCGC
TTGCGTTTGTGACCCAAGATACTCCTGTCGGTGTCTCCAGTCACAGGTCA
GCTGCTTATATTTAATGCCTCTCTACATACAGCTTGCAATCTAAGAGGCA
ACATGTCAATACCTACAACATACAGCACATCACCTGCTGTAGACTATTTC
AACTATTTCGGTACCGGCACATGGTGTGCCCAGCTGCTGTTGGGTTTTGG
CCATGCATCGTTGTCGCTTTTGTACTCCTCTTTATTGTCTCCGGACGCTC
TCTGACTGTTTGACAGATATTTTTTTGTTGAACGGGCCCACCGGGCCGAA
ACATGTGTTGTAAACGAAATAGGTGTGTGTACAGAGGTACTGCTTTAATT
AAGGAGGCGAAGCCGTGGGCGGTAGCTTGCTCCTAGAGATAGATGAAGGT
TCTGTCGTTGGCACTCTTGTCCACGACCACGTTGAGATGGCAAAGTTGCT
TATTATTGCTGAGAGACGATCAGCAAGGGTCTGAGATGAAGTGGGGATCC
AACTTCATTTCACGGGGTACACAGAGTAGACAATTCTTAGGGGGTAGGGG
TACAAGAAGGAATACCTCCTGACCGACCCACATCCTATCAACAATAAGAT
GTACCCTATTTAATGCTAGCAGCCACACTCCTTAACACTGCTGTATCTTT
CCACACAAGACATTTCTGGCTAGTACTCTCTTGGTGATGCAGTGGGTCCA
GTTCCTACTCAATCCTACCGTTGTCAGCTGATGTGGTACGCTGGCAAGTT
GCCGCCGCCCACGCAGAAGGCATGGGCGCTCCCAACCTCTAGGCTTTCCA
AGATCGAAAACGAAAACAACAGAATGACCCGCAGCACCCCACCTCCGCTT
GCTCTACCTCCCTCCCTATCCGCTAAGCTACCAACCGACAGCGGCGGTTC
ACGGCACCTCTTCGAACCCAAGGCGGTCATCTCCACTATCTGAACAAGGT
GATGTGTGTGTCGCCATTACCGGGGGTGCGGGTCAAATAGCTTACGCCCT
CGTGCCACTCCTCATGCACGGCCGCGTGTTCGGGGAAGGTCGCAAAGTCA
GGCTACGACTTCTAGACATCGAGGCGTGCGTCGGGGCTCTGCAAGGTTTC
GCCATGGAAATTCAAGACTGCAATTCCGACCTGGTGGGTTGCTGATTGCG
GGGGAATTCCCCATAGCGTGGTCAGCGTTGGGTCTAGACTCACGAGTCAG
GCCACAGCTCAATTATGCACTTGCCAATGTTTCCCTTTGGGTCTGTCTTA
TTGCGCGTCACATGGCTGAACACATGAACGGAAGAAGGAAATCTGGAGGG
AAGTCCATGTCGCTTCCCTCCAAGTGCTTGGTTTCCACACGGATTCCGTC
GGAGACCGAGCACCGATAGTGCTTCACTTTGGGCGGGCTTGCCATGCAAT
GGCAGCGTTGATGCTTTCATTTGCACCGGAGTGCCGCAACCCTATTCACA
AGATGTTTGGGGGTTCAAATGTTCGCCACGGGCAAAGGTTTTGCGCTCGT
GCATTGTTTTGCTTCAATCCGTCACTACCTCTCCTGCGAAGGGTCGCCAC
CCATCCCACACTCTTGCCTACCTGTGTTTGTTTCCATAGGGCTTGTTTCC
GCCCACGTTCACGCACGTGCGATCTTTAGGTTATGCATTATGATTTCTGG
ATGCGTTTGGCTCTTAAAATCTTATCCGTCAACGTGATATGAGTCTAATA
TATTTCACGATGGGCAGAAGCATTGTACAATGCAAGAACTATTAGCGCTG
AAGAACGTCCCCTTTCATCAACATTTTGGCCATCTAGGTGACAGAAGTTG
TTGCTACAAGCGATCCGGAGGTGGCGTTCAAGGGGGCCGACGTGGCTGTC
CTCCTCGGAGGGTTTCCGCGGCTGCCGGTGAGACCCTCTAGGAAATTCTC
CCTCGAAAGATCGGTCGGTTGGCAACTAGGTGTACTTTTTGTCGAGTTCG
CCAGTAGAACACAGAATGGTAGATGTAGCAGTGTTCATCCACGCGTGGTG
ATCAGATGCGGCTCATGGACCTCAGCTATGAAGCATCTACACGGCTCTCC
TGTTTCCTAAGTTCATTCGAACGCATCGATATGCCTTTGGATCCACCTGA
AGCCAAACGAAACCTCCGCCTACACACCGCGTTCCGTTCCTCTTTCGTTT
CCTAGGGTATGGAGCGTCGGGATCTGATAGCCAAGAATGTGCCGATCATG
GCCGAGCACGGCAGAGCCCTCGCGAAGTGTGCGAAGGACGGGGTCAGGGT
GCTTGTAGTGGCCAACCCGGCATGCACAAACTGTCTCATGGTGACTGAGA
GGAAGATTTCGCCAGTTCTCATGAACGACGAAGCGTGTTGTGAATTAATT
CAATCCCGTTGTTTGCGCACGCCTTGTTTATCATGCGGACCTTGTGTGCC
GTGCTTGTACCCGCTTGACGCCGCTTCGTGCGGTAGCTGGAGACCTTCGA
GTGCTTATCCCATCAAGGACTATTTGGCATTTTCCTTTTTTGCGCATGCA
CTGTTCACTTAGCATGTGCGGTGGTTGTGCGTTTAGCAAGTGCAATGGCT
GCTCGTGTAGTCGGTGCTTGCTTGATGAGCTCTGCCCTAGCACAGCTGGT
GATTGGAACTATCGTCGGGGAGACTAGTATCAACAAGGTCAGATCCCAAC
TGATTCTGACCCCAAGCAACCCTGGAAAGACTCCAACCTTCTCACTACTA
CCATTTTCGACGTGGCAGGCCGCCACCAGCGCGCCATCCATTCCGCGCAG
TCACTTCAGCAGCCTCGCCCGCTTGGACCAGGATCGCTTGTCGGCGATGT
TGGCGGAAAACCTCTGTTCAGAAGAAACTCTGGAACAGACTTCAGGGGGA
GCACGTACGGTACGTCTTGCCTTGATGTTTGTATGAAGGTTGTGTATTCT
GCCGTTGAACACCGTGGTTTCCACACCCTTCACACAATTTTCAGCTAGTG
CTGCTCCTGACTATGTTTGATTGAATCGACTAATATCGCTCCGTGTCGAT
GCTTGTTGTGTATACACCTCGAGGGACCCCCCGGACTTGGTTTCTTCATT
GATACGTTCGTACGCTCCGGTGACTGATGCTTCCTCTAATGTTATACGAT
GTCTTGGGTATGGGCTATTGTGCATACTGCAGATAACGGGTTGTGAGGAG
AGCTTGTCAATATTGCCTATTGATGATGGAACTCCCCGCTACGAACAGCG
CTCTGACTCCACAACGTGCGAACTTGACCCGTTTGCCTGACCTATAGCCG
CTGTCCGGGGATGTCTCGCTCCCACAGCAAGAGCCGGAGAGGCAGCACGC
CGTTCGCACGAGGCAAGACAGAAATATCCTCCAGCTCGAGGGGCCAGGCG
TTCGCGGGGTGTATGTATGGGGCAATCACAGCCCCACCATGTGGCCCGAC
GTGTCTGGAGCGGAGGCAAAAATTGACGGCCGGTGGGTACCGTTGCAGAC
TGCTCTGCAACGAGACGGTGGACTTCCAAATGGGACGGGACTGTTGTCTC
CTGCTCGTGAAGATGGTACGGCACCGGACTTGGATTCGGCCTGGCACGAT
TGGATATCTGAAACGCTTGTCCCGGCAGTGCGCGAAAGGTGGGTTGGAAG
CTACGGTGACGACGAAAATCGTCACGCGGTCATTGCAAACTCACCTGTTC
TTGCTAATATTTGAAAACTCAGGTCTTCAGCCCAATCGTTTGACGTCGGC
GCGTTCGCGTCCAATGTGCCGGGGTCGTTCAACCGGCGCTTCAGGCGCCC
CATCGCTCCTCACACGCCGTTTTTTATGGGAGCATAAAGTTGCGAGAAAA
GTTGTGGTTTGCGAACATTTCTCGCAACTGTTGTTATGTACGATCTTTAT
GGGAGCAAAAAGTTGCGCTTAAAGTTTGAATTTTTTTCTCCACCAATCCA
CGTCAAGTACCTGCCCCTACCACACACGTAGATCCTCTCCCGCCACACAC
ACGCGCACGATCCACGCGATAGATGAACGACCAAGTCAGAATACTTCAAC
GACGAGTTGGAGTTTATGGCCTACGATGGCCGCAGCTATGTGGAATACGT
ATATGTATCCATAGAGTCTGCGTCAAACATTATTTGTTTTTGGTGTGAGC
ATGAATGAGGTCTTCCTGGCTTCAAATGGAAGGCACAACGCCAGGTTTTG
TGCCACCAGCTCGTTTTCCAAATCGTCGTTCCAAGCTCTGGCCGGTTTCT
CGGGGTGGTACGAAGGGGTATGCCTGCTTCTCGCCGTTGCTCAATAAACA
AAAAACGATCACGCCTCCGCGTTCCACCAGTCACGTGAAGAAACTTCCTT
CGCCCCATAGTGAGCGTGCAATAAAAGTGTTTTTGACAAAAGTTCCCGAC
CAAAACTTGCAAACAAACTTTTCCTTTTCTCGCAACTTCACGCTCCCATA
AAAAGCAGTGTAAATAGATGAGAATAAAAGGGTGTGTGCCAAAACCCCGT
GGGCGCCCTCGTAGTGAACAGGGGTTCAAGAGTCTTTTCCATCACCCTAC
CTTGCTTTCGTTTAACCCGAAGGACTGTGTACGAGAATACGGTTGTAGCC
GAAGTATGAAAATATTTTAGCAGTACACCTTCATGCCGCATGTGGACCTG
TAAATGTTTCTCTTGACCAAGAATAGTCTTACTTCGAAGTAGATAAGATA
AGATCATTGTGCTCTCAGGCGCTGCCAACGGAAGATTTCTCTTCGTATCG
CCATCGTCCATAACTCGCAGCATATTTCCCCCGCTCTGCGGTGCTCACCC
ACACGGAGCAACAACTTTCCCCACGGAAAGGCCTGGATACGTATGTTTCG
TTTCTTGACAGGTCGTGCTCCTTCCCACGAATTTCCAGCGTCGTTTTCTT
GTTCTTCGTCGCATCATCCGTCTATGTGACCCTCAGCCATTGGCAAGTTC
AGCGCCTCTGTACCCTGCACAGCATAGCAAAAGTGTGTCTCACGCGTTTT
GAGGGGCCCCCAGGGATACCCACCAAAAACGGCGAGATTGGTGATGCGTT
GTCAGCGCCATCACTTGCAACTGCGTGGGTGATTCTGTCAATGGGGGATG
GGGGGTGGCACCAATAATGTTTGAAGCAATCGCTCGAGTTGGTCACAATC
CTGGAGTGTCTATGCGTAAGATGTTTTCATAAGCGGCTGTTGCGCCGCTT
CTTGGACTAACGTCCTTCTCTGCTCCTAGAGGCGACGGTTGTCATTACAT
TTGAGTAGTATTGGCGGCCGTTCACTGTGCTCATCCTCTTCGGTTTGATC
AACGCACACGCCCTTCTTTCGTGACACACGACCGCAAATCCAGGGGTACG
AAAGTGATCGAGGCCAGAGGGAAATCAAGCGCCCTCTCCGCCGCAAACGC
CATCGCAAACCACCTCAAGGACTGGTTGCATTCTTCGACAAGTGGGACGC
ATGCCGGTGTATCGATGGGCGTGTTTTCAGATGGAAACCCATATGGTGTC
CCGGACGACGTTGTCTTCTCGTTTCCTGTCGAGTGCGGAGAAGGTATGCA
TATATGGCAGTGATGGCTGCAAAAAGAGATGTGACGTCATGACCGTGGAT
GACTTCATCGGTCGGAAATTTCGGTCGAAGGATTATTCCTTTAAAAAATA
TTGGGCAATCAGAAAACTGCGGGCACCTTTTATTCGAAAGTTGTTCATTC
GTTCATGTGACGCTCTAGTCAAGTGTAGGCAAGTATTCACGATTTACGGA
AGGGGCAAGAGTATGTTTGGTGCACACGCACGGCTGCAGTTCAACAGCAT
CACTTTTGGTTTGAAGAAGTTACATGTTGTGACTGCATTACATCACTATC
CTATCGCGCACGGAGTGCAGTTGACCAACCTTGCATGGTGCCAAGTAACG
TTGACCAATTTTTCATCTCGAGTTTTGCATTGATAAGACGTTCACATGGT
GGCCTGACTTGCCGCCACCTTGTATTTTCTTCCTTGCCTTTCGCGCTACC
ACTCGTCTCGCCAAGACGTATCGTTTGGTGTACAACATACCTCCATTGAC
CCCAGGGATAATGGCGTGTCATCTCCTGAAACCTTATAGATACTTTCTCG
CACAGGATGCTAATTGAAACCTTGTGCACCTTTAACGTGGAGATGACTGG
GAATCTGTCCGTGTGTATCAACGCGTTCTGACGTACCTTGAGATTTTTTC
CCTCTCCCATCCATGTTGTGTGGCTTTTACTGCCCAACGGCAACCTCAAT
CGCCAGGTCGACATCGGATCTTGAACGGGTTTCGCCCCGACATGGCAATG
CTGGATGAATCTGCGAAGGAACTTCTTGAAGAGCGGCGAGAAGCACTCGA
AACGTTGCGAGAATCGGAAAGACAGGCTTTGTCGTAGTTCGCTGGAGTTG
TGGATGTTCTGTACTTCTCGCCACGTACACCCTGTCACGGCAGCTACACA
GGAATCGGATACGTACACATTGAGCAGCTCCAAGGATAGACAGGCCTTGG
CTGCAATGAAAATATGACGACGACCTTGGACGACCGGGAATATAGCTTCG
GAACACCCAACAAATGCGAGTGCTCGCGTTGCTTGTATTGCTACTGAAAC
AAGTATCAACAGCGTGTCTCTTGCTTGCCACGTTCAAAAGTGACGAACTG
AGCTACTCACGCAAATGTAACGCGCG

Coding sequence (CDS) from alignment at chr_00:5738853..5745528-

>Ec-00_004290.1 ID=Ec-00_004290.1|Name=Ec-00_004290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1344bp|location=Sequence derived from alignment at chr_00:5738853..5745528- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGGCTGTTCGCGCTCTTTTGGGGGACGGCGCTTGCGTTTGTGACCCA
AGATACTCCTGTCGGTGTCTCCAGTCACAGCTACCAACCGACAGCGGCGG
TTCACGGCACCTCTTCGAACCCAAGGCGGTCATCTCCACTATCTGAACAA
GGTGATGTGTGTGTCGCCATTACCGGGGGTGCGGGTCAAATAGCTTACGC
CCTCGTGCCACTCCTCATGCACGGCCGCGTGTTCGGGGAAGGTCGCAAAG
TCAGGCTACGACTTCTAGACATCGAGGCGTGCGTCGGGGCTCTGCAAGGT
TTCGCCATGGAAATTCAAGACTGCAATTCCGACCTGGTGACAGAAGTTGT
TGCTACAAGCGATCCGGAGGTGGCGTTCAAGGGGGCCGACGTGGCTGTCC
TCCTCGGAGGGTTTCCGCGGCTGCCGGGTATGGAGCGTCGGGATCTGATA
GCCAAGAATGTGCCGATCATGGCCGAGCACGGCAGAGCCCTCGCGAAGTG
TGCGAAGGACGGGGTCAGGGTGCTTGTAGTGGCCAACCCGGCATGCACAA
ACTGTCTCATGGCCGCCACCAGCGCGCCATCCATTCCGCGCAGTCACTTC
AGCAGCCTCGCCCGCTTGGACCAGGATCGCTTGTCGGCGATGTTGGCGGA
AAACCTCTGTTCAGAAGAAACTCTGGAACAGACTTCAGGGGGAGCACGTA
CGCAAGAGCCGGAGAGGCAGCACGCCGTTCGCACGAGGCAAGACAGAAAT
ATCCTCCAGCTCGAGGGGCCAGGCGTTCGCGGGGTGTATGTATGGGGCAA
TCACAGCCCCACCATGTGGCCCGACGTGTCTGGAGCGGAGGCAAAAATTG
ACGGCCGGTGGGTACCGTTGCAGACTGCTCTGCAACGAGACGGTGGACTT
CCAAATGGGACGGGACTGTTGTCTCCTGCTCGTGAAGATGGTACGGCACC
GGACTTGGATTCGGCCTGGCACGATTGGATATCTGAAACGCTTGTCCCGG
CAGTGCGCGAAAGGGGTACGAAAGTGATCGAGGCCAGAGGGAAATCAAGC
GCCCTCTCCGCCGCAAACGCCATCGCAAACCACCTCAAGGACTGGTTGCA
TTCTTCGACAAGTGGGACGCATGCCGGTGTATCGATGGGCGTGTTTTCAG
ATGGAAACCCATATGGTGTCCCGGACGACGTTGTCTTCTCGTTTCCTGTC
GAGTGCGGAGAAGGTCGACATCGGATCTTGAACGGGTTTCGCCCCGACAT
GGCAATGCTGGATGAATCTGCGAAGGAACTTCTTGAAGAGCGGCGAGAAG
CACTCGAAACGTTGCGAGAATCGGAAAGACAGGCTTTGTCGTAG

Synonyms

The feature 'Ec-00_004290.1' has the following synonyms


Synonym
Esi0344_0024
Esi_0344_0024