Ec-00_004040.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004040.1
Unique Name	Ec-00_004040.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	431

Homology

[Close]

BLAST of Ec-00_004040.1 vs. uniprot
Match: D7FWW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW8_ECTSI)

HSP 1 Score: 763 bits (1970), Expect = 6.160e-277
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 1

Query:    1 MRDLDLKERLHWMEDNNDQAGSSSNGVNDSFDSSTTVVDEGDIYTGDGHLRGLFDGSSDGMVEDLTGSSEAPEATPWTVPTGVCDLATESGQGDFLTGPWRSNASSTXXXXXXXXXXXXXXNGHNPTYSAARRTGNNHELHGHYRGTGAPFTPQPMGSMGHMAVGYNGAAGIINQPPTEFGPGACSQPWVSLADYHAICSAQWPHHQLGGAHGQHRGQLGANTPYGPGVSTFLPSVGGSSLDTLPSALAPYGMVQGAPGGAPATAHGSSSYLGVGPAIPLSAGANKVAASAGVAAVAPLAGPAIAVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGVPDPELDGFREQLELMQSPSATVGTLRATIASFEAMKSCRRMNGKPNLTNSVATLPLYKAPNISRWAKQCRLLSNADANQELREARKAINM 1290
            MRDLDLKERLHWMEDNNDQAGSSSNGVNDSFDSSTTVVDEGDIYTGDGHLRGLFDGSSDGMVEDLTGSSEAPEATPWTVPTGVCDLATESGQGDFLTGPWRSNASSTXXXXXXXXXXXXXXNGHNPTYSAARRTGNNHELHGHYRGTGAPFTPQPMGSMGHMAVGYNGAAGIINQPPTEFGPGACSQPWVSLADYHAICSAQWPHHQLGGAHGQHRGQLGANTPYGPGVSTFLPSVGGSSLDTLPSALAPYGMVQGAPGGAPATAHGSSSYLGVGPAIPLSAGANKVAASAGVAAVAPLAGPAIAVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGVPDPELDGFREQLELMQSPSATVGTLRATIASFEAMKSCRRMNGKPNLTNSVATLPLYKAPNISRWAKQCRLLSNADANQELREARKAINM
Sbjct:    1 MRDLDLKERLHWMEDNNDQAGSSSNGVNDSFDSSTTVVDEGDIYTGDGHLRGLFDGSSDGMVEDLTGSSEAPEATPWTVPTGVCDLATESGQGDFLTGPWRSNASSTXXXXXXXXXXXXXXNGHNPTYSAARRTGNNHELHGHYRGTGAPFTPQPMGSMGHMAVGYNGAAGIINQPPTEFGPGACSQPWVSLADYHAICSAQWPHHQLGGAHGQHRGQLGANTPYGPGVSTFLPSVGGSSLDTLPSALAPYGMVQGAPGGAPATAHGSSSYLGVGPAIPLSAGANKVAASAGVAAVAPLAGPAIAVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGVPDPELDGFREQLELMQSPSATVGTLRATIASFEAMKSCRRMNGKPNLTNSVATLPLYKAPNISRWAKQCRLLSNADANQELREARKAINM 430

The following BLAST results are available for this feature:

BLAST of Ec-00_004040.1 vs. uniprot

BLAST of Ec-00_004040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FWW8_ECTSI	6.160e-277	100.00	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:4969834..4977198 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1293
Hectar predicted targeting category	other localisation
Gene id	Ec-00_004040.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004040	Ec-00_004040	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 4969834..4977198 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004040.1	Ec-00_004040.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 4969834..4977198 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004040.1.5	Ec-00_004040.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4969834..4969915 -
Ec-00_004040.1.4	Ec-00_004040.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4970704..4970890 -
Ec-00_004040.1.3	Ec-00_004040.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4971210..4972218 -
Ec-00_004040.1.2	Ec-00_004040.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4972923..4972930 -
Ec-00_004040.1.1	Ec-00_004040.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4977192..4977198 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004040.1	CDS:Ec-00_004040.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 4969834..4969915 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:4969834..4977198-
coding sequence from alignment at chr_00:4969834..4977198-

mRNA sequence

>Ec-00_004040.1 ID=Ec-00_004040.1|Name=Ec-00_004040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=431bp
MRDLDLKERLHWMEDNNDQAGSSSNGVNDSFDSSTTVVDEGDIYTGDGHL
RGLFDGSSDGMVEDLTGSSEAPEATPWTVPTGVCDLATESGQGDFLTGPW
RSNASSTTTTTTGGDGDGRGGNGHNPTYSAARRTGNNHELHGHYRGTGAP
FTPQPMGSMGHMAVGYNGAAGIINQPPTEFGPGACSQPWVSLADYHAICS
AQWPHHQLGGAHGQHRGQLGANTPYGPGVSTFLPSVGGSSLDTLPSALAP
YGMVQGAPGGAPATAHGSSSYLGVGPAIPLSAGANKVAASAGVAAVAPLA
GPAIAVPPAPAVAPPAAPAVAPPAAAAVAPPGNAAVAQGVPDPELDGFRE
QLELMQSPSATVGTLRATIASFEAMKSCRRMNGKPNLTNSVATLPLYKAP
NISRWAKQCRLLSNADANQELREARKAINM*

spliced messenger RNA

>Ec-00_004040.1 ID=Ec-00_004040.1|Name=Ec-00_004040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1293bp|location=Sequence derived from alignment at chr_00:4969834..4977198- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGAGACCTGGACCTGAAGGAGAGGTTGCATTGGATGGAGGACAACAA
CGACCAGGCTGGCAGCTCGTCCAACGGCGTCAACGACTCATTCGATTCAT
CGACGACTGTCGTCGACGAGGGCGACATCTACACGGGCGACGGCCACCTC
CGAGGTCTGTTCGACGGTAGCTCAGACGGCATGGTGGAAGATTTAACGGG
CTCGTCTGAGGCTCCTGAGGCTACACCCTGGACTGTGCCGACCGGTGTTT
GCGACCTTGCAACTGAGAGCGGACAAGGCGACTTCCTAACGGGCCCGTGG
CGCTCAAACGCCAGCAGCACCACCACCACCACCACCGGAGGCGATGGAGA
CGGCCGCGGCGGCAACGGCCACAACCCCACGTATTCCGCAGCGAGGCGCA
CCGGCAACAACCACGAGCTTCATGGCCACTACCGGGGCACAGGAGCTCCC
TTTACGCCACAGCCGATGGGATCCATGGGGCACATGGCCGTTGGATACAA
CGGCGCGGCCGGGATCATCAACCAGCCACCAACGGAATTCGGCCCGGGTG
CCTGCAGCCAACCTTGGGTTTCCCTTGCCGACTACCACGCCATCTGTTCT
GCCCAGTGGCCTCATCATCAGCTCGGCGGGGCACACGGACAGCACAGGGG
GCAGCTAGGAGCCAACACACCTTACGGGCCCGGTGTATCAACCTTCCTTC
CTTCTGTTGGGGGGTCTTCATTGGACACCCTCCCATCCGCTTTGGCACCG
TACGGAATGGTTCAGGGCGCGCCTGGCGGAGCTCCCGCGACTGCGCATGG
GTCATCGTCCTATTTGGGGGTTGGCCCAGCGATTCCACTATCTGCTGGTG
CAAACAAGGTTGCTGCGTCTGCTGGGGTGGCGGCGGTGGCGCCTCTTGCT
GGTCCAGCGATTGCTGTCCCTCCTGCTCCAGCGGTTGCGCCCCCTGCTGC
CCCTGCGGTGGCGCCCCCTGCTGCAGCGGCGGTTGCGCCCCCTGGAAACG
CCGCAGTCGCCCAGGGAGTACCAGACCCAGAACTAGATGGGTTTCGGGAG
CAACTGGAGTTGATGCAGTCCCCGTCGGCGACCGTGGGAACCCTACGCGC
GACCATCGCGTCCTTCGAGGCCATGAAGAGCTGCCGCAGGATGAACGGCA
AACCCAACCTGACCAACTCCGTCGCTACTCTACCCCTTTACAAGGCTCCC
AACATATCGAGATGGGCTAAGCAGTGTAGGCTGCTGAGCAATGCCGATGC
TAACCAAGAGCTCCGGGAGGCTCGTAAGGCCATCAACATGTAG

protein sequence of Ec-00_004040.1

>Ec-00_004040.1 ID=Ec-00_004040.1|Name=Ec-00_004040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=431bp
MRDLDLKERLHWMEDNNDQAGSSSNGVNDSFDSSTTVVDEGDIYTGDGHL
RGLFDGSSDGMVEDLTGSSEAPEATPWTVPTGVCDLATESGQGDFLTGPW
RSNASSTTTTTTGGDGDGRGGNGHNPTYSAARRTGNNHELHGHYRGTGAP
FTPQPMGSMGHMAVGYNGAAGIINQPPTEFGPGACSQPWVSLADYHAICS
AQWPHHQLGGAHGQHRGQLGANTPYGPGVSTFLPSVGGSSLDTLPSALAP
YGMVQGAPGGAPATAHGSSSYLGVGPAIPLSAGANKVAASAGVAAVAPLA
GPAIAVPPAPAVAPPAAPAVAPPAAAAVAPPGNAAVAQGVPDPELDGFRE
QLELMQSPSATVGTLRATIASFEAMKSCRRMNGKPNLTNSVATLPLYKAP
NISRWAKQCRLLSNADANQELREARKAINM*

mRNA from alignment at chr_00:4969834..4977198-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004040.1 ID=Ec-00_004040.1|Name=Ec-00_004040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7365bp|location=Sequence derived from alignment at chr_00:4969834..4977198- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGAGGTATCTTACGCAATGTAGACGAGTCGCGTGGTACGGCTATAGA
TGCCTGATAGCACTGTGGCATTGTTTTCCTTGTTTTATGTGTATGTATAT
GTATGTGTATATGTTTGTGTGTTACATGTTTGTGTTTATGTATGTTTGTC
TGTATGTTTCCAGCTCGCCCTCTCGATCTATTTTCGAGACTGGCTATTGC
TTCTGTATGTTTCTAGCTCGCCCTCTCGATCTATTTTCGAGACTGGCTAT
TGCTTCTGTATGTTTCTAGCTCGCCCTCTCGATCTATTTTCGAGACTGGC
TATTGCTTCTGTATGTTTCTAGCTCGCCCTCTCGATCTATTTTCGAGACT
GGCTATTGCTTCTGTATGTTTCTAGCTCGCCCTCTCGATCTATTTTCGAG
ACTGGCTATTGCTTCTGTATGTTTCTAGCTCGCCCTCTCGATCGATTTTT
GAGACTGGCTATTGCTTCTGCATGTTTCTAGCTCGCCCTCTCGAATATTT
CGAGACTGGCTATTGCTTCTGCATGTTTCTAGCTCGCCCTCTCGAATATT
TCGAGACTGGCTATTGCTCCTTTATGCTTTCCGCTCGCCCTCTCAATCTC
TTTGAGACTGGCTCTTGCTTTTGTGTTGCGTACTTTCGCGCCCCGTTTGT
CACTTCTCGGTCGGTTGTCGAAAGTTTTCGCTCCCCTTTACCTATTTTTC
AATGCGACCTAGGTTCGTCATTAGTTGCGGTGACACCCAAATTTGGTGCA
TCATTTAACTCCCCACCCTATGGTTTGCTTTGCATATTTTGTGGTCCAAC
GTTCCGTCAGTGCTTCTATTGCATGCCACGGCCAACGTGTTCCATCTTGG
TACTTTCTTTAGCATTTTTCTTCATACAATTGGCCTTGACGTACACGTAG
GATTGTTTTCCTCGCCCCACCCCGATCGCAAGCACGTTGTATCGTGACAT
GCGAACGTTGTTTTTGGCGTTGGTTCCTGTCCTTTTCTTTGGCCGTTGTT
TACGTTCCCCGGAAACCCCCTCTTTTCCTGCTTTTCTCGATTTTGGTCGA
CCCCTAACGGTTTTCCATGTCGTTTGATCCTTTGCAGGCTCGGTTTTCGT
TTCTTATTCTTTATGTTTACATTTCAGCACTCGATCGCATCGTAGCCCCC
CTTCCCGTAAGGTTCTGGCTTACTTGATTGCGTATTCGATCGGTTCATCC
GTACGAGATCGTTTGTGATTTTCTCTTCACGATTTCGTTACTTCGTGTTA
TGGTCTTTTCGGTTCGGATGTTTTGGTTATTTTTCGCGCCCATGTGCCTT
TTACCGATTTTATCCACCGACTTTGCCGCCCCGGCTTCTGTGTTTTCTTC
TTTCTTGGTTCCGCTTCTTTGGTTTGGTTAACGGAGAGGTGCGGGTGAGG
GTTTTGAGTTGTCGTATCTTCGATCCATCCCGCAATCCTCTTGATTGACT
AGAGTCCCTCCGAGGTTTGCTTCTGTATCTGCATCTACGTCCACTCAGGG
TGGGCTATTGTTATGGTATTTGGAGGTAGACATGTGATCGTGGTTGATCA
TGGTTATTTGGCGCCGTCGGATGCTAAGACGTGACGTCATGCTAGATCAG
GGCTTTATGCCGAGACATGTGCCCTTCTGTTCAGTGTGTGCGTACAGGCG
ATCTATGATCGTGTGTGCGTGGGATATTGTGAGTTGGCTTGGAAAGCGTT
AATCAAGAGAAAGAGAACAACGGAAAGCAACAACAACCTGCTACTGTGGT
CGGACAAGAGAGTTCCACACAGCTCAAAGGTGATTGATTCTGAAGGAAGG
GGTCAAAAACCATTACAGTACAGTGAAGGTCGACTCTTGCCGGCCACAGG
AGGCGTAAACTGCTGCTCAAGATCGGGGACGGGTCATGATTTATTTTCGG
TTCTCCACCGAACGGATCTCGAACGATGAGACTTCAGAAAAGCTTCACGA
TTGCGAAAGGTGGGCCCAGTTTTAAAGACATGGCAAGCGAACACCCCCTC
GTAACAAACATTAGAACTGAAATAATAGGTGGGTGGGTGACCGGCGGACC
CCGAAAAGCAAAGCATTAAAAATATCGCTCAAAAATTGAAAGAAGGGAGA
ACAGAGACAAGCGAACAGGACGCGACAGGTTTCCGGGAGGTCGGGAAAGA
GAGCATAGAGAAGCCACCGTCGCCGCTCTGAACCGCTGGAAGCTGTCACA
CAGCACGGAATGCAGCAAACAGTGGGGGCGATGCCCATTTTTTGACGTAA
AGAGGCAGGGCCCATCGCCTCACATGCAGCAGCCGGGTACACGGGTAGCC
TCACTCAGCAAGAAACAAAACGATTGCGGTTGACGTTCGATGTTGTTGGG
ATCCGATCGGCGACAGCCGAGAGGGAAACAGGTACTGTAGACCAAAAGAA
TCGCACGTCGACAAGGAATTAACTCTCGAGAGTACACTCACTCTCGTCCC
TGTGGCCCACCGAAGGCTGTCAAAGACGTGTTACGAACGGCGACATCCGA
TGTGCGCTCAGCAACAACACCAACAAAAAATATAACTAACAAAACTAAAT
CGCCGTTTCCGAACTGTGGAGACTTTTTTTCCTTTGTGGTTTGAAGCGTG
GCGAAACAAAAAAGAACGTGACTACTGCTGTATATAGAAGCACCACGGCG
AACTATAATATTATCTCAATACGCTTGCCGTCGCGATAGATGCGCACCGC
TGCACGAACGAGCAGATAGTTGGTAATCATACCTCACTACGTAAATAAGA
TTGTGCTGCCATCTGCCTCATCGCTCAAATTACGACTACGCAGCAGACTC
AAGGTAGGTGCGACACGCTTACGATGCTTTACCACCCATGCCATGCATAG
ACTATGCAGCAAGAGAGTAAAATATATCTAAGGCGGACCGTCTGTTGTTG
GCTGTACCTTCAACCGTGCTGCCGTTGGTTTCTTCATCAATATCGACACA
GTAGAGAAATAATTGAGTAATTCGCATCTCCTATGCGAGCACAGAGTGCA
GCCCAAGCGACAGAGACGATACCCTTACGACTTTTGCAGCATATATATTT
CGGGAATACCAGCGGCAACCGCAGGTGTAAAACCGTCACCCAGGAAGAAA
ACCACAAAAGGAACTGAAAAAATATGGTGGCGCGCAGCAAGCAGGACCCT
CTTTCGCTGTTCAACCGGCCGTTCCAACGGCGAAACAGACAAGGAACAGT
CAAGGCCGAGTCGTGCCGGCCACAGGAGGTGCAAGCTGCTCAAACTCGGG
GAGGGGTCATGGTTTGTGATTTCCTACCGAACCATACTTGAGGCGCCACG
AGATACTATTTAAACTGTAGCCCGAGATCAGCATTTATTTGAGACCGGGT
CGGGCCAGGGGTTGGGGATGCGAATGAAAGTTCCACCCACGGATATCGAA
CGATGAGACTAAAGCTAAAGCTTCAGAATTTTAAACCCTGAACGGCGAAA
AGAAAACCGACCTTTGTTTTATTATGCTTGTTCTATTCGTGATGTCATCG
AAAAAATTACGTTAACTTTGCTGAATACACGATTTTGCTCAGCACACAAC
AGGTTGCCTTGGTTTTGCTCACCATAGAGCAGCGGTAAAATCGCAATTAC
CCTAATCGGACACAAAAGATCCCGTCGAACCGCCCTGCTGTTTATAGCTC
TCAGCAACAACAGGCGCAGGGTAGAGTGTCGCAACCTGGGTCTTGTTTGC
GATTTGTTCAGTTTGCCGGCTCATTTTTCACGGTTGCGACTCCCGGCTTT
GACCACCACCTGTCCAAAGGTAGACGAGCTCAACAATCGTAGCGCCGCAG
CGGCGCTGACGACCAGCATTACATACATGACCAATCCGAAAGAATTAGCG
TATCGGAAGCCCTGTTGCTCTACTACTGCTGCGTGGCGTGCCGTGTATTG
ATGTTGATGTGTCCGACCAAAAAACAGATCGATCATCTAGCCTCGTCTTT
AGCAACGGCACTTTGGTGAGGTGGAACACGTCTCTCACATACCTTCTTTG
AGCAGCACCCAAGCCCCCAGTACCCACGAACAAGCACGGCGCCGGGTGAG
TATAATGTAGACAGCCCAACCGAAGGAATCAGCGCCTTACAGGTCTTGGC
GCTGCTGCCGTACTCGTTGTACTGTTTCCGTGTAAGCTATGTGTGATTGA
AAACCCTTCTCCAGCACCAACAGTAGCAGATGACGACGAGAGAGCACCAC
GCAATATCTCATTTTGGACCAAGAACGGACTGAACGCGGCTTCTGTTGCT
TGTCCATGTCGACAACAGACCTGGACGTGAGTTTGGCAGGTCTAGCTAGC
GTTCTCAGTGATGTTCCAACTATTCGCGGTGCGCCTGCCCGACCCTTGTG
TCATATTCCCGGATCCGGGAATAAATTCGCTACTTTCCCTGATCAGGGGA
GCAACGCCTCCATATCTATCCGAAAAAGCATGGAACCGTTTTTTTCGTTT
GTTTTTCGTCGTTAACAGTGACCCAAAGTGTGCACGCTCACGGGGTAAAA
TTTCAACCCTTGAGCCTTGATTTCGTCCGCGCTCAGTTTGAGTGTATCGG
GGCGATATCGACAATCTGTTTCGATACCTGTGGTTTCTAAAACACCCTCC
ACCCAATCACGTCGTCGGCTTTGGCCGTAACCCTAGCATGTACAATCCTC
AAGAGGCATACGCGGCACCTGCTGGACAAGTTTTTGACATGGCCTGACAT
TGCGTAGCTGATGGTTAACCTGAACGGGTAACGAAATACAGGCAGGCAAT
ATCATATCCCGAGGACGACATGGACTACCAATGAGCAATCTGACCCGATG
TCAAAGCAGTGTTGGCACGGCAGCGGTACCCCTTCATCGCAACAATAAAC
GTGGCGTCAAGGACAACCCTGACTAATTACATACGCTAATGACAACCCGA
GGGCTGTGCCTGATTCAAATACACACGGTGTTGACCTCAACATATACTAA
CATGTCTCACACTACTTTACGGTTGCACAGCTGAAGGAGAGGTTGCATTG
GATGGAGGACAACAACGACCAGGCTGGCAGCTCGTCCAACGGCGTCAACG
ACTCATTCGATTCATCGACGACTGTCGTCGACGAGGGCGACATCTACACG
GGCGACGGCCACCTCCGAGGTCTGTTCGACGGTAGCTCAGACGGCATGGT
GGAAGATTTAACGGGCTCGTCTGAGGCTCCTGAGGCTACACCCTGGACTG
TGCCGACCGGTGTTTGCGACCTTGCAACTGAGAGCGGACAAGGCGACTTC
CTAACGGGCCCGTGGCGCTCAAACGCCAGCAGCACCACCACCACCACCAC
CGGAGGCGATGGAGACGGCCGCGGCGGCAACGGCCACAACCCCACGTATT
CCGCAGCGAGGCGCACCGGCAACAACCACGAGCTTCATGGCCACTACCGG
GGCACAGGAGCTCCCTTTACGCCACAGCCGATGGGATCCATGGGGCACAT
GGCCGTTGGATACAACGGCGCGGCCGGGATCATCAACCAGCCACCAACGG
AATTCGGCCCGGGTGCCTGCAGCCAACCTTGGGTTTCCCTTGCCGACTAC
CACGCCATCTGTTCTGCCCAGTGGCCTCATCATCAGCTCGGCGGGGCACA
CGGACAGCACAGGGGGCAGCTAGGAGCCAACACACCTTACGGGCCCGGTG
TATCAACCTTCCTTCCTTCTGTTGGGGGGTCTTCATTGGACACCCTCCCA
TCCGCTTTGGCACCGTACGGAATGGTTCAGGGCGCGCCTGGCGGAGCTCC
CGCGACTGCGCATGGGTCATCGTCCTATTTGGGGGTTGGCCCAGCGATTC
CACTATCTGCTGGTGCAAACAAGGTTGCTGCGTCTGCTGGGGTGGCGGCG
GTGGCGCCTCTTGCTGGTCCAGCGATTGCTGTCCCTCCTGCTCCAGCGGT
TGCGCCCCCTGCTGCCCCTGCGGTGGCGCCCCCTGCTGCAGCGGCGGTTG
CGCCCCCTGGAAACGCCGCAGTCGCCCAGGGAGTACCAGGTGAGGGTAAC
ATGGTCAGGTGCAGTACACCCCAGTGCACGTTCGACTACCCCGTTTACGA
TCGCGCCGTTCGGGTTCGATAGCGCGTAGACTTTGTGTATAAAAATCGTT
TTTTGTCGCCGCCCTCCCCCCGTGCTTCGTTGGGTTGAGGGAAATACACG
ATTCAGCCCCGGTGTGAATAGGAAAGGCTATCGACACGTGCGCAACTATA
ATTTCAACCTGCAAACCACAGTTCACCCAGAATACTACCCGATATTCGAA
ATCCTTCGTCCACCATGTACTTACGCCCTCCGAATGGAACCATAATGTTT
GCGACCAGACCCAGAACTAGATGGGTTTCGGGAGCAACTGGAGTTGATGC
AGTCCCCGTCGGCGACCGTGGGAACCCTACGCGCGACCATCGCGTCCTTC
GAGGCCATGAAGAGCTGCCGCAGGATGAACGGCAAACCCAACCTGACCAA
CTCCGTCGCTACTCTACCCCTTTACAAGGCTCCCAACATATCGAGGTAGG
TCCCTAAGTAACCTCATTCGTATGCATCTAGGAAGTGGGTGGAGTATGCC
ATACCACGCGGACTTTATCCCGACCGAACTGAACCCAAGGAAACACGCTA
CAGGCACTACGACAGTAGTTGCAGACGTCTTACGACGCACTTGTCTCTCG
ACGCAACCACATAGACTAGTACACGAATCAGTCCGAGCTGGCTATGCGTA
GCGAGGGGCGTTCGTCCTGCCGTGCATGAAGGCGTGGTACGTAGTTGCTC
AATTCCGAGTCCATCCACAGCCATATAGACTATGCTACAAACATAATTCC
TGGTCATACACGCACGTGTGCGTCAAAATGCACCTGTAAACCCTGCTGTT
GGTCCAACCCCCCCATCAGTCAAACCCTGGTAACTAATGTAGACTCCGCG
TCTGGCATGCATACTAGACTATGTACAATCAAGGTTTTAGCTCCGTCAAC
AGAAAACAACGACGCCCGCTAATTCTTGCTTCCTGGTGAGTTAGCGGGGC
TACTGTCCGCTGCCAAGGAAGAAACCCATTACTTAGGCACATGTATGTAT
GTAGCTCTTCTAACATTGATACATCCCTGGCAAACACCAAGCACACGCAT
GTACACGTACTGTTTTCTCCACTGAAGTGGGCGCTTGTACGCTCATCCTA
CTGTACACTGTATTTATTCACTACATTCACAACTTTCCTTCAACAATCAC
ACGACTGTATTTATTCACTGCATTCACAACTTTCCTTCAACAATCACACG
ACCACGCCCCAATCACCACCCTGTGCTTTCCAGATGGGCTAAGCAGTGTA
GGCTGCTGAGCAATGCCGATGCTAACCAAGAGCTCCGGGAGGCTCGTAAG
GCCATCAACATGTAG

Coding sequence (CDS) from alignment at chr_00:4969834..4977198-

>Ec-00_004040.1 ID=Ec-00_004040.1|Name=Ec-00_004040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1293bp|location=Sequence derived from alignment at chr_00:4969834..4977198- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGAGACCTGGACCTGAAGGAGAGGTTGCATTGGATGGAGGACAACAA
CGACCAGGCTGGCAGCTCGTCCAACGGCGTCAACGACTCATTCGATTCAT
CGACGACTGTCGTCGACGAGGGCGACATCTACACGGGCGACGGCCACCTC
CGAGGTCTGTTCGACGGTAGCTCAGACGGCATGGTGGAAGATTTAACGGG
CTCGTCTGAGGCTCCTGAGGCTACACCCTGGACTGTGCCGACCGGTGTTT
GCGACCTTGCAACTGAGAGCGGACAAGGCGACTTCCTAACGGGCCCGTGG
CGCTCAAACGCCAGCAGCACCACCACCACCACCACCGGAGGCGATGGAGA
CGGCCGCGGCGGCAACGGCCACAACCCCACGTATTCCGCAGCGAGGCGCA
CCGGCAACAACCACGAGCTTCATGGCCACTACCGGGGCACAGGAGCTCCC
TTTACGCCACAGCCGATGGGATCCATGGGGCACATGGCCGTTGGATACAA
CGGCGCGGCCGGGATCATCAACCAGCCACCAACGGAATTCGGCCCGGGTG
CCTGCAGCCAACCTTGGGTTTCCCTTGCCGACTACCACGCCATCTGTTCT
GCCCAGTGGCCTCATCATCAGCTCGGCGGGGCACACGGACAGCACAGGGG
GCAGCTAGGAGCCAACACACCTTACGGGCCCGGTGTATCAACCTTCCTTC
CTTCTGTTGGGGGGTCTTCATTGGACACCCTCCCATCCGCTTTGGCACCG
TACGGAATGGTTCAGGGCGCGCCTGGCGGAGCTCCCGCGACTGCGCATGG
GTCATCGTCCTATTTGGGGGTTGGCCCAGCGATTCCACTATCTGCTGGTG
CAAACAAGGTTGCTGCGTCTGCTGGGGTGGCGGCGGTGGCGCCTCTTGCT
GGTCCAGCGATTGCTGTCCCTCCTGCTCCAGCGGTTGCGCCCCCTGCTGC
CCCTGCGGTGGCGCCCCCTGCTGCAGCGGCGGTTGCGCCCCCTGGAAACG
CCGCAGTCGCCCAGGGAGTACCAGACCCAGAACTAGATGGGTTTCGGGAG
CAACTGGAGTTGATGCAGTCCCCGTCGGCGACCGTGGGAACCCTACGCGC
GACCATCGCGTCCTTCGAGGCCATGAAGAGCTGCCGCAGGATGAACGGCA
AACCCAACCTGACCAACTCCGTCGCTACTCTACCCCTTTACAAGGCTCCC
AACATATCGAGATGGGCTAAGCAGTGTAGGCTGCTGAGCAATGCCGATGC
TAACCAAGAGCTCCGGGAGGCTCGTAAGGCCATCAACATGTAG

Synonyms

The feature 'Ec-00_004040.1' has the following synonyms


Synonym
Esi0316_0018
Esi_0316_0018