Ec-00_004010.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_004010.2
Unique Name	Ec-00_004010.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	219

Homology

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 9.840e-151
Identity = 287/375 (76.53%), Postives = 307/375 (81.87%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAEVR-------AAQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            TE+ A + ARLDEALRAIE A               AAQ++SAGAPAGS  GGDGLVA GGA SA V P  PGGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD FLSWRRRF  Y DNH+L HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA AWRMMEDW+LPNHPA  DCQLLVAELDNITM++  EDPK+FFSRVAQLETKLRAVGI KSE EVV+IL+RQLPAR DVEKR+SLS RDLTRAELQDVVRGRYA LKASEMR   SAA+TPAVS NPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXX +WSS            XXXQPQ Q+QQY
Sbjct:    4 TEEDATLSARLDEALRAIEEAXXXXXXXXXXXXXLWAAQRRSAGAPAGSSSGGDGLVAPGGASSAPVRPMWPGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAGAWRMMEDWYLPNHPA--DCQLLVAELDNITMSDD-EDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLSNRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVSVNPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXXHWSSXXXXX-------XXXQPQLQVQQY 368

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 2.890e-148
Identity = 280/375 (74.67%), Postives = 301/375 (80.27%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAET-------AEVRAAQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            TE+ A + ARLD+ALRAIE AKAET           AAQ++SAGAPAGS  GGDGLVA GGA SA V P  PGGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD FLSWRRRF  Y DNH+L HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAELDNITM++  EDPK+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQLPAR DVEKR+SLSKRDLTRAELQDVVRGRYA LKASEMR   S A TPAV  NPHALVVGRGFGHG  XXXXXXXXXXXX        Q+WSSG  V Q         QPQ Q+QQY
Sbjct:    4 TEEDATLSARLDKALRAIEEAKAETNXXXXXXXXXXAAQRRSAGAPAGSSSGGDGLVAPGGASSAPVRPMWPGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELDNITMSDD-EDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSVASTPAVFVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGXXVVQQQ-------QPQLQVQQY 368

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5L646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L646_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 7.640e-146
Identity = 275/375 (73.33%), Postives = 296/375 (78.93%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAEVRA-------AQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            TE+ A + ARLDEALRAIE                  AQ++SAGAPAGS  GGDGLVA GGA SA V P   GGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD FLSWRRRF  Y DNH+L HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAEL+NITM++  EDPK+FFSRVAQLETKLRA GI KSE EVVQIL+RQLPAR DVEKR+SLSKRDLTRAELQDVVRGRYA LKASEMR   SAA+TPAVS NPHALVVGRGFGHG  XXXXXXXXXXX         Q+WSSGG V Q         QPQ Q+QQY
Sbjct:    4 TEEDATLSARLDEALRAIEEXXXXXXXXXXXXXXXXXAQRRSAGAPAGSSSGGDGLVAPGGASSAPVRPMWLGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELENITMSDD-EDPKLFFSRVAQLETKLRAAGIAKSEQEVVQILVRQLPARFDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXNGNNCDGRGQHWSSGGGVVQQQ-------QPQLQVQQY 368

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 5.780e-142
Identity = 275/375 (73.33%), Postives = 299/375 (79.73%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAE-------VRAAQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            TE+ A + ARL+E LRAIE AKAET         +RAAQ +SAG PAGS  GGDGLV  GGA SA V P  PGGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD  LSWRRRF  Y DNH+L HT  GSAEVP+VSCQD GYL RQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAELD+ITM++  E+PK+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQ PAR DVEKR+SLSKRDLTRAELQDVVRGRYA LKASEMR   SAA+TPAVS NPHALVVGRGFGHG  XXXXXXXXXXXX        Q+WSSGG V Q         QPQ Q+QQY
Sbjct:    4 TEEDATLSARLEEPLRAIEEAKAETXXXXXXXXXLRAAQLRSAGVPAGSSSGGDGLVTPGGASSAPVRPMWPGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTVLSWRRRFLAYVDNHNLQHTFFGSAEVPVVSCQDKGYLIRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELDDITMSDD-ENPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQYPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGGGVVQQQ-------QPQLQVQQY 368

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 1.790e-141
Identity = 278/375 (74.13%), Postives = 299/375 (79.73%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAEVRA-------AQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            TE+ A + ARLDEALRAIE                  AQ++SAGAPAGS  GGDGLVA GGA SA V P  PGGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD FLSWRRRF  Y DNH+L HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAELDNITM++  EDPK+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQLPAR DVEKR+SLSKRDLTRAELQDVVRGRYA LKASEMR   SAA+TPAVS NPHALVVGRGFGHG  XXXXXXXXXXXX        Q+WSSGG V Q         QPQ Q+QQY
Sbjct:    4 TEEDATLSARLDEALRAIEEXXXXXXXXXXXXXXXXXAQRRSAGAPAGSSSGGDGLVAPGGASSAPVRPMWPGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELDNITMSDD-EDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGGGVVQQQ-------QPQLQVQQY 368

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.750e-137
Identity = 240/304 (78.95%), Postives = 256/304 (84.21%), Query Frame = 2

Query:  872 PGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            PGGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD  LSWRRRF  Y DNHDL HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAELDNITM++  EDPK+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQLPAR DVEKR+SLSKRDLTRAELQDVVRGRYA LKASEMR   SAA+TPAVS NPHALVVGRGFGHG  XXXXXXXXXXXX        Q+WSSGG V Q         QPQ Q+QQY
Sbjct:    3 PGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTLLSWRRRFLAYMDNHDLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELDNITMSDD-EDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGGGVVQQQ-------QPQLQVQQY 296

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.050e-134
Identity = 237/304 (77.96%), Postives = 253/304 (83.22%), Query Frame = 2

Query:  872 PGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGFGHGXXXXXXXXXXXXXXXXXXXXXXQYWSSGGAVAQXXXXXXXXXQPQSQMQQY 1774
            PGGVSH GGTGVPGLPLGGTIV TPVPR+P NCTAD FLSWRRRF  Y DNH+L HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAELDNITM++  EDPK+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQLPAR DVEKR+SLSKRDLTRAELQDVVRGRYA LKASEMR   SAA TPAVS NPHALVVGR FGHG  XXXXXXXXXXXXXX      Q+WSS            X  QPQ Q+QQY
Sbjct:    3 PGGVSHDGGTGVPGLPLGGTIVTTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELDNITMSDD-EDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAASTPAVSVNPHALVVGRDFGHGGNXXXXXXXXXXXXXXNCDGRGQHWSSXXXXX-------XQQQPQLQVQQY 296

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5KWA2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWA2_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 3.960e-132
Identity = 225/305 (73.77%), Postives = 248/305 (81.31%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAEVR-------AAQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRSSLSKRDLTRAELQDVVRGRYAALKASEMRSAAVTPAV 1573
            TE+ AA+RARLDEALRAI+ AKAET E         AAQ++SAGAPAGS  GGDGLVA GGA S  V P  PGG+S+ GGTGVP LPLGGTI  TPVPR+ SNCTA+AFLSWRR F  Y DNH+L HTI+GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVG P EN +YSCHSVA+AWRMM DWFLP+HPA  DCQLLVAELD +TMN   E+PK+F SRVAQLETKLRAV I KSE EVVQIL+RQLPAR DVEKR+SL KRDLTRAELQDVVRGRYA LKASEMR    T AV
Sbjct:    4 TEEDAALRARLDEALRAIDVAKAETKEXXXXXXXXXAAQRRSAGAPAGSSSGGDGLVAPGGASSPPVRPMWPGGMSYDGGTGVPDLPLGGTIASTPVPRISSNCTAEAFLSWRRCFLAYVDNHNLQHTISGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGGPLENKMYSCHSVAEAWRMMADWFLPSHPA--DCQLLVAELDTVTMNND-ENPKLFCSRVAQLETKLRAVVIAKSEQEVVQILVRQLPARYDVEKRTSLPKRDLTRAELQDVVRGRYATLKASEMRERGSTAAV 305

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 4.050e-120
Identity = 239/369 (64.77%), Postives = 257/369 (69.65%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAEVR-------AAQQQSAGAPA-GSPGGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKRS------------------------------------------------SLSKRDLTRAELQDVVRGRYAALKASEMR---SAAVTPAVSANPHALVVGRGF 1612
            TE+ A + ARLDEALRAIE                 AAQ++SAGAPA  S GGDGLVA GG  SA V P  PGGVSH GGTGVPGLPLGGTIVRTPVPR+P NCTAD FLSWRRRF  Y DNH+L HTI GSAEVP+VSC+D GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDWFLPNHPA  DCQLLVAELDNITM++  EDPK+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQLPAR DVEKR+                                                SLS RDLTRAELQDVVRGRY  LKASEMR   SAA TPAVS       VGRGF
Sbjct:    4 TEEDATLSARLDEALRAIEXXXXXXXXXXXXXXXXXAAQRRSAGAPACSSSGGDGLVAPGGVSSAPVRPMWPGGVSHDGGTGVPGLPLGGTIVRTPVPRIPLNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAEVPVVSCKDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPNHPA--DCQLLVAELDNITMSDD-EDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSNRDLTRAELQDVVRGRYTTLKASEMRERGSAASTPAVS------XVGRGF 363

[Close]

BLAST of Ec-00_004010.2 vs. uniprot
Match: A0A6H5K155_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K155_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 6.060e-115
Identity = 197/267 (73.78%), Postives = 215/267 (80.52%), Query Frame = 2

Query:  683 TEDIAAVRARLDEALRAIEAAKAETAEVRA-------AQQQSAGAPAGSP-GGDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPSNCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGSKLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAPADCQLLVAELDNITMNEG*EDPKVFFSRVAQLETKLRAVGIVKSELEVVQILIRQLPAR*DVEKR 1459
            TE+ A + ARLDEALRAIE                  AQ++SAGAPAGS  GGDGLVA GGA SA V P  PGGVSH GGTGVPGLPLGGTIVR PVPR+P NCTAD FL+WRRRF  Y  NH+L HTI GSAEVP+VSCQD GYLTRQ+G++LV EHKR W FILEAAVGAPFEN LYSCHSVA+AWRMMEDW+LPNHPA  DCQLLVAELDNITM++  ED K+FFSRVAQLETKLRAVGI KS+ EVVQIL+RQLPAR DVEKR
Sbjct:    4 TEEDATLSARLDEALRAIEEXXXXXXXXXXXXXXXXXAQRRSAGAPAGSSSGGDGLVALGGASSAPVRPMWPGGVSHDGGTGVPGLPLGGTIVRIPVPRIPPNCTADTFLNWRRRFLAYVGNHNLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPA--DCQLLVAELDNITMSDD-EDLKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARCDVEKR 267

The following BLAST results are available for this feature:

BLAST of Ec-00_004010.2 vs. uniprot

BLAST of Ec-00_004010.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LA89_9PHAE	9.840e-151	76.53	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN41_9PHAE	2.890e-148	74.67	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L646_9PHAE	7.640e-146	73.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JVD9_9PHAE	5.780e-142	73.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K2K1_9PHAE	1.790e-141	74.13	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JBS7_9PHAE	1.750e-137	78.95	CCHC-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A6H5JU47_9PHAE	1.050e-134	77.96	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5KWA2_9PHAE	3.960e-132	73.77	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KYB5_9PHAE	4.050e-120	64.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K155_9PHAE	6.060e-115	73.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:4833876..4836434 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1914
Hectar predicted targeting category	other localisation
Gene id	Ec-00_004010.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_004010	Ec-00_004010	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 4833876..4836434 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004010.2	Ec-00_004010.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 4835188..4835844 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004010.2.1	Ec-00_004010.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4833876..4834136 +
Ec-00_004010.2.2	Ec-00_004010.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4834480..4834590 +
Ec-00_004010.2.3	Ec-00_004010.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4834893..4836434 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004010	5UTR:Ec-00_004010.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 4833876..4834136 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004010.2	CDS:Ec-00_004010.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 4835188..4835844 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_004010	3UTR:Ec-00_004010.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 4835845..4836434 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:4833876..4836434+
coding sequence from alignment at chr_00:4833876..4836434+

mRNA sequence

>Ec-00_004010.2 ID=Ec-00_004010.2|Name=Ec-00_004010.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=219bp
MSDGGDTEDIAAVRARLDEALRAIEAAKAETAEVRAAQQQSAGAPAGSPG
GDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPS
NCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGS
KLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAP
ADCQLLVAELDNITMNEG*

spliced messenger RNA

>Ec-00_004010.2 ID=Ec-00_004010.2|Name=Ec-00_004010.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1914bp|location=Sequence derived from alignment at chr_00:4833876..4836434+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCATGACACACAACAACATGTTTGTGTATCTCGCCAACAACTCGAC
GGTGGTCCCGGGAGGGGAGATGGATGGAATGAACACCAACTTGCCAAGAG
CGGAGTGTATTCAAGTCCTTGCGGCTTCGTTCGCTGAGGGTGTTAAAGAG
ACCACGACGATCTGTGCCCTGGCGGCGGCGTCTCCGGAGCAAGGCACCGC
TCGGAAGTATCTTGAGGGCACCAGTCGGGCGATCTCCGCTACCATCGACG
AAGATCAAAAACTCGGAAAGGAAACCCTCGAGGGTTTGCGCGGATTGCAG
GGCGGCATCGAAGATCTCCTTCACGGCACATCCGAGCCGACTTGGGAACA
GAGCTTGAAGGTGGCGATGTGGGTCTTGAGTCAACCTTCTTTCTCTGTCG
GCCTCTGACGGGCTACCGCACCCAAACACAATATATTGGGCCTGGTGTTG
GTAGTGGGTATTGACGTCTGAGCTGTGTGAGCCGGGTCAACGGAGCGGTC
GACACTTTTCTTCCATATTTCTTCTAGCAGGAATCGCGGCCAACGGGGGC
GAGGACAGCAGCATTGTGTAGCTGGTGCGGTGGCCATTGCGGGGACCGGG
ACAGCAGGTTTTATAGCTGGGACAGTACTTCGAGGCTGCGACAGCAGGTT
TAGGGTTTTAGTTAGATATGTCGGATGGTGGGGATACGGAGGATATTGCA
GCTGTGCGCGCGAGGCTGGATGAGGCGCTGCGAGCTATAGAGGCTGCTAA
GGCTGAGACGGCGGAGGTTCGGGCAGCACAGCAGCAGTCGGCGGGTGCAC
CTGCCGGCAGCCCAGGAGGCGACGGTCTAGTTGCTACTGGAGGGGCTCCA
TCTGCATCGGTGGGGCCGACGGGGCCAGGTGGGGTGAGTCACGGTGGTGG
TACTGGTGTGCCGGGTTTGCCTTTGGGAGGTACCATTGTCAGAACTCCTG
TGCCTAGACTCCCGTCAAATTGCACCGCCGACGCTTTTCTTAGTTGGCGG
AGACGGTTCCGAGTCTACGCGGACAACCATGATCTCCTGCATACCATCGC
CGGCAGTGCTGAGGTTCCCCTTGTGAGTTGTCAAGACGTCGGATACCTGA
CTCGCCAGTTCGGCTCAAAGCTTGTTGGTGAGCACAAGAGGATGTGGGGT
TTTATCTTGGAGGCAGCGGTGGGGGCCCCATTTGAGAACACCCTGTACTC
TTGCCATTCCGTGGCCGATGCGTGGAGGATGATGGAGGATTGGTTTTTGC
CGAACCACCCAGCTCCAGCCGATTGTCAGCTTCTTGTCGCCGAGCTTGAC
AACATCACAATGAATGAAGGATGATGAGGACCCCAAGGTGTTCTTCTCGC
GCGTTGCACAGCTTGAGACCAAGTTGCGGGCTGTGGGCATTGTCAAGAGT
GAGCTGGAGGTTGTGCAGATTCTCATCCGTCAACTCCCTGCACGCTAGGA
TGTCGAGAAGCGCAGTAGCCTTTCCAAGCGTGATCTAACCCGCGCTGAGC
TGCAGGACGTCGTGCGTGGTCGGTATGCTGCGCTCAAGGCTAGCGAGATG
AGGTCGGCGGCTGTGACACCGGCGGTTTCCGCCAACCCGCATGCTCTTGT
TGTTGGCCGTGGTTTTGGGCACGGCGGCAACGGGGGGGGCGGGGGGGGCG
GAGGCCAACGGCGGAATGGTAACAGCGGCGACGGCCGTGGGCAATATTGG
TCCTCTGGGGGAGCTGTTGCCCAACATCAGCAGCAACCGCGGCAACAGCA
ACAGCCGCAGTCGCAGATGCAACAGTACCGACAGCCGCAGCAGCCGCAGG
GGCAAATGCAAAAACCGTACCAACAACCGCAGCAGCAGATGCGACAGCAA
CAGCCGTACCAACAGCAGTCGCAGATGCAGCCGTACCGGCAGCCGCAACA
GCAGCAGCGGCAGC

protein sequence of Ec-00_004010.2

>Ec-00_004010.2 ID=Ec-00_004010.2|Name=Ec-00_004010.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=219bp
MSDGGDTEDIAAVRARLDEALRAIEAAKAETAEVRAAQQQSAGAPAGSPG
GDGLVATGGAPSASVGPTGPGGVSHGGGTGVPGLPLGGTIVRTPVPRLPS
NCTADAFLSWRRRFRVYADNHDLLHTIAGSAEVPLVSCQDVGYLTRQFGS
KLVGEHKRMWGFILEAAVGAPFENTLYSCHSVADAWRMMEDWFLPNHPAP
ADCQLLVAELDNITMNEG*

mRNA from alignment at chr_00:4833876..4836434+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_004010.2 ID=Ec-00_004010.2|Name=Ec-00_004010.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2559bp|location=Sequence derived from alignment at chr_00:4833876..4836434+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATCATGACACACAACAACATGTTTGTGTATCTCGCCAACAACTCGAC
GGTGGTCCCGGGAGGGGAGATGGATGGAATGAACACCAACTTGCCAAGAG
CGGAGTGTATTCAAGTCCTTGCGGCTTCGTTCGCTGAGGGTGTTAAAGAG
ACCACGACGATCTGTGCCCTGGCGGCGGCGTCTCCGGAGCAAGGCACCGC
TCGGAAGTATCTTGAGGGCACCAGTCGGGCGATCTCCGCTACCATCGACG
AAGATCAAAAAGTGAGAGATATAATAAGAACCTGTAGTGCATGTAGCTGG
TGCTGTTTTCGTTACATGTCCACTCGACCTGAGCAATACTCGCCATGTGA
CCGCACAACAACAATTCAGTCTCCTGCATCTGCGCGCCCTACGCCTAACT
AACGATAAACGCACACACGTATACTGAAACACATTTTGCTTTGTACGAGC
AATGTGTACGCAGCGTTCGATGCACTTTAGCGTTCCGTTAACGAACAAAA
AGTCGATATCTTCGCTTGTCACCCGCAGTTTTTCAACTGACCAGTAAACG
CTGATTCCAAAATGTGTCCGTGCTGCTTGTCGGCTTTTGCTTGTGCTTGT
GCAGCTCGGAAAGGAAACCCTCGAGGGTTTGCGCGGATTGCAGGGCGGCA
TCGAAGATCTCCTTCACGGCACATCCGAGCCGACTTGGGAACAGAGCTTG
AAGGTGGCGATGTGGGTGAGTCTTGGGTGTTGCATGCATGATTTTGTGAA
AGCTCTGTTTTGCGGACTTGAGCGTTCTCACGAGCGTTGACATGTCAGGC
ACAAGAGCACCCAAACGAATGGGTGGTCTTTCTGTGAGATTATGTGTACT
TCCTCAAAAGAGCACCGAAACGGTTGGTCGTTGTTTGGGGTGCTCAGCAG
GATACTGATCTACGGGGCCTCCGGGGGTTACGTGGATGATGTTTGTGTAT
GATGGACATGATACGTGCGGGGCCCCTCGTGCCTCCGCCGTGCATGCCAC
TCTCTAATCAACCAAAGGTCTTGAGTCAACCTTCTTTCTCTGTCGGCCTC
TGACGGGCTACCGCACCCAAACACAATATATTGGGCCTGGTGTTGGTAGT
GGGTATTGACGTCTGAGCTGTGTGAGCCGGGTCAACGGAGCGGTCGACAC
TTTTCTTCCATATTTCTTCTAGCAGGAATCGCGGCCAACGGGGGCGAGGA
CAGCAGCATTGTGTAGCTGGTGCGGTGGCCATTGCGGGGACCGGGACAGC
AGGTTTTATAGCTGGGACAGTACTTCGAGGCTGCGACAGCAGGTTTAGGG
TTTTAGTTAGATATGTCGGATGGTGGGGATACGGAGGATATTGCAGCTGT
GCGCGCGAGGCTGGATGAGGCGCTGCGAGCTATAGAGGCTGCTAAGGCTG
AGACGGCGGAGGTTCGGGCAGCACAGCAGCAGTCGGCGGGTGCACCTGCC
GGCAGCCCAGGAGGCGACGGTCTAGTTGCTACTGGAGGGGCTCCATCTGC
ATCGGTGGGGCCGACGGGGCCAGGTGGGGTGAGTCACGGTGGTGGTACTG
GTGTGCCGGGTTTGCCTTTGGGAGGTACCATTGTCAGAACTCCTGTGCCT
AGACTCCCGTCAAATTGCACCGCCGACGCTTTTCTTAGTTGGCGGAGACG
GTTCCGAGTCTACGCGGACAACCATGATCTCCTGCATACCATCGCCGGCA
GTGCTGAGGTTCCCCTTGTGAGTTGTCAAGACGTCGGATACCTGACTCGC
CAGTTCGGCTCAAAGCTTGTTGGTGAGCACAAGAGGATGTGGGGTTTTAT
CTTGGAGGCAGCGGTGGGGGCCCCATTTGAGAACACCCTGTACTCTTGCC
ATTCCGTGGCCGATGCGTGGAGGATGATGGAGGATTGGTTTTTGCCGAAC
CACCCAGCTCCAGCCGATTGTCAGCTTCTTGTCGCCGAGCTTGACAACAT
CACAATGAATGAAGGATGATGAGGACCCCAAGGTGTTCTTCTCGCGCGTT
GCACAGCTTGAGACCAAGTTGCGGGCTGTGGGCATTGTCAAGAGTGAGCT
GGAGGTTGTGCAGATTCTCATCCGTCAACTCCCTGCACGCTAGGATGTCG
AGAAGCGCAGTAGCCTTTCCAAGCGTGATCTAACCCGCGCTGAGCTGCAG
GACGTCGTGCGTGGTCGGTATGCTGCGCTCAAGGCTAGCGAGATGAGGTC
GGCGGCTGTGACACCGGCGGTTTCCGCCAACCCGCATGCTCTTGTTGTTG
GCCGTGGTTTTGGGCACGGCGGCAACGGGGGGGGCGGGGGGGGCGGAGGC
CAACGGCGGAATGGTAACAGCGGCGACGGCCGTGGGCAATATTGGTCCTC
TGGGGGAGCTGTTGCCCAACATCAGCAGCAACCGCGGCAACAGCAACAGC
CGCAGTCGCAGATGCAACAGTACCGACAGCCGCAGCAGCCGCAGGGGCAA
ATGCAAAAACCGTACCAACAACCGCAGCAGCAGATGCGACAGCAACAGCC
GTACCAACAGCAGTCGCAGATGCAGCCGTACCGGCAGCCGCAACAGCAGC
AGCGGCAGC

Coding sequence (CDS) from alignment at chr_00:4833876..4836434+

>Ec-00_004010.2 ID=Ec-00_004010.2|Name=Ec-00_004010.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=657bp|location=Sequence derived from alignment at chr_00:4833876..4836434+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCGGATGGTGGGGATACGGAGGATATTGCAGCTGTGCGCGCGAGGCT
GGATGAGGCGCTGCGAGCTATAGAGGCTGCTAAGGCTGAGACGGCGGAGG
TTCGGGCAGCACAGCAGCAGTCGGCGGGTGCACCTGCCGGCAGCCCAGGA
GGCGACGGTCTAGTTGCTACTGGAGGGGCTCCATCTGCATCGGTGGGGCC
GACGGGGCCAGGTGGGGTGAGTCACGGTGGTGGTACTGGTGTGCCGGGTT
TGCCTTTGGGAGGTACCATTGTCAGAACTCCTGTGCCTAGACTCCCGTCA
AATTGCACCGCCGACGCTTTTCTTAGTTGGCGGAGACGGTTCCGAGTCTA
CGCGGACAACCATGATCTCCTGCATACCATCGCCGGCAGTGCTGAGGTTC
CCCTTGTGAGTTGTCAAGACGTCGGATACCTGACTCGCCAGTTCGGCTCA
AAGCTTGTTGGTGAGCACAAGAGGATGTGGGGTTTTATCTTGGAGGCAGC
GGTGGGGGCCCCATTTGAGAACACCCTGTACTCTTGCCATTCCGTGGCCG
ATGCGTGGAGGATGATGGAGGATTGGTTTTTGCCGAACCACCCAGCTCCA
GCCGATTGTCAGCTTCTTGTCGCCGAGCTTGACAACATCACAATGAATGA
AGGATGA

Synonyms

The feature 'Ec-00_004010.2' has the following synonyms


Synonym
Esi0310_0024
Esi_0310_0024