Ec-00_003970.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003970.1
Unique NameEc-00_003970.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length78
Homology
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BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5K2E1_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E1_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 7.510e-123
Identity = 189/226 (83.63%), Postives = 197/226 (87.17%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSRKTKQTCMADFM 723
            LAEG QPH LDAAEL LEAWKEV  ETIKRCWRKCDILPPAVHADLDQDVGKNI NKKE+L+ LTDLVQRLSLEAK TT+DEDLGEALKGLGLAPGA PT+ASMEAVQTWL VE+K  VAEAII +LKDDLCEESLA L             AD SAGDEGQCTQPLVSPRPP YADVSRQFGDLEEIAERCSMAGVAYHLRKAK+AWMSEAGS+KTKQTCMADFM
Sbjct:  430 LAEGAQPHSLDAAELDLEAWKEVLPETIKRCWRKCDILPPAVHADLDQDVGKNIRNKKESLEELTDLVQRLSLEAKTTTVDEDLGEALKGLGLAPGATPTRASMEAVQTWLRVEQKEGVAEAIIKDLKDDLCEESLAHLNMDQLSIDSDDDEADFSAGDEGQCTQPLVSPRPPTYADVSRQFGDLEEIAERCSMAGVAYHLRKAKVAWMSEAGSKKTKQTCMADFM 655
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5JRP4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP4_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 5.290e-122
Identity = 188/226 (83.19%), Postives = 195/226 (86.28%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSRKTKQTCMADFM 723
            LAE  QPHILDAAELGLEAWKE   ETIKRCWRK DILPPAV+ADLDQDVGKNI NKKE+L  LTDLVQRLSLEAKKT + EDLGEALKGLGLAPGAAPT+ASMEA QTWL VEEK  VAEAIIA+LKDDLCEESLA L             ADS AGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAK+AWMSEAGS+KTKQTCMAD M
Sbjct:  306 LAERAQPHILDAAELGLEAWKEALPETIKRCWRKFDILPPAVNADLDQDVGKNIRNKKESLQELTDLVQRLSLEAKKTAVHEDLGEALKGLGLAPGAAPTRASMEAAQTWLRVEEKEGVAEAIIADLKDDLCEESLAHLNMDQLNIDSDDDEADSLAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAKIAWMSEAGSKKTKQTCMADSM 531
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5JHY0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY0_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 1.950e-113
Identity = 193/295 (65.42%), Postives = 201/295 (68.14%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEK------------------------------------AD--------------------------------VAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEI-AERCSMAGVAYHLRKAKLAWMSEAGSRKTKQTCMADFM 723
            LAEG QPHILDAAELG EAWK+V  ETIKRCWRKC+ILPPAVHADLDQDVGKNI NKKE+L+ LTDLVQRLS EA KTT+DEDLGEALKGLGLAPGA PT ASMEAVQTWL VEE+                                    AD                                VAEAIIA+LKDDLCEESLA L             ADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEI AERCSMAGVAYHLRKAKLAWMSEAGS+KTKQTCMADFM
Sbjct:  165 LAEGAQPHILDAAELGFEAWKKVLPETIKRCWRKCEILPPAVHADLDQDVGKNIRNKKESLEELTDLVQRLSPEAGKTTVDEDLGEALKGLGLAPGATPTWASMEAVQTWLRVEEEDGVAEAIIADLKDDLCEESLAHLNTDQLNIDSDDDEADSSAGDEGQCTQPLVSPRPPPYAXWLRVEEEDGVAEAIIADLKDDLCEESLAHLNTDQLNIDSDDDEADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIIAERCSMAGVAYHLRKAKLAWMSEAGSKKTKQTCMADFM 459
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 3.020e-106
Identity = 172/226 (76.11%), Postives = 181/226 (80.09%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSRKTKQTCMADFM 723
            LAEG QPHILDAAELGLEAWKEV  ETIKR                  DVGKNI NKKE+L+ LTDLVQRLSLE KKTT+DEDLGEALKGLGLAPGA PTQASM+AVQTWL VEEK  +AEA I +LKDDLCEESLA L             ADSSAGDEG+CTQPLVSPRPPPYADVSR+FGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGS+KTKQT MADFM
Sbjct:  179 LAEGAQPHILDAAELGLEAWKEVLPETIKR-----------------GDVGKNIRNKKESLEELTDLVQRLSLETKKTTVDEDLGEALKGLGLAPGATPTQASMKAVQTWLRVEEKEGIAEANIEDLKDDLCEESLAHLNMDQLNIDSDDDEADSSAGDEGKCTQPLVSPRPPPYADVSRKFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSKKTKQTRMADFM 387
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5K2U1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U1_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 9.940e-100
Identity = 159/210 (75.71%), Postives = 172/210 (81.90%), Query Frame = 1 
Query:   94 LEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSRKTKQTCMADFM 723
            L A+ + S+    RCWRK  ILPPAVHA+LDQDVGKNI NKKE+L+ LTDLVQ LS EAKKTT+DEDLGEALKGL L PGA PT+ASMEAVQT L VEEK  VA AIIA+LKD+LCEESLA L             ADSS GDEGQCTQPLVSPRPP YADVS QFGDLEEIA+RCSMAG+AYHLRKAKLAWMSEAGS+KTKQTCMADFM
Sbjct:   63 LPAYADYSS--FSRCWRKYGILPPAVHANLDQDVGKNIRNKKESLEELTDLVQCLSREAKKTTVDEDLGEALKGLRLVPGATPTRASMEAVQTRLRVEEKEGVAGAIIADLKDNLCEESLAHLNMDQLNKHSDDDEADSSVGDEGQCTQPLVSPRPPQYADVSMQFGDLEEIAKRCSMAGIAYHLRKAKLAWMSEAGSKKTKQTCMADFM 270
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5JNH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH8_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.320e-99
Identity = 172/226 (76.11%), Postives = 179/226 (79.20%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADVSRQFGDLEEIAERCSMAGVAYHLRKAKLAWMSEAGSRKTKQTCMADFM 723
            LAEG QPHILDAAELGLEAWKEV  ETIKR W+KCDILPPAVHADLDQDVGKNIPNKKE+L+ LTDLVQRLSLEAKK+T+DEDLGEALKG                              EAIIA+LKDDLCEESLA L    XXXXXXXXX  S AGDEGQCTQ LV PRPPPYADVSRQF DLEE AERCSMAGVAYHLRKAKLAWMSEAGS+KTKQTCMADFM
Sbjct:  247 LAEGAQPHILDAAELGLEAWKEVLPETIKRYWKKCDILPPAVHADLDQDVGKNIPNKKESLEELTDLVQRLSLEAKKSTVDEDLGEALKG------------------------------EAIIADLKDDLCEESLAHLNMDQXXXXXXXXXXXSLAGDEGQCTQTLVYPRPPPYADVSRQFVDLEEKAERCSMAGVAYHLRKAKLAWMSEAGSKKTKQTCMADFM 442
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5KT98_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT98_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.680e-76
Identity = 127/162 (78.40%), Postives = 137/162 (84.57%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQ 531
            LAEG QPHILDAAELGLEAWKEV  ETIKRCWRKCD+LP AVHADLD+DVGKN+ NKKE+L+ LTDLVQRLSLEAKKTT+DEDLGEALKGLGLAPGA PT+AS +AVQTWL VE+K  VAEAIIA+LKDDLCEESLA L             ADSSAGDEGQ
Sbjct:  270 LAEGAQPHILDAAELGLEAWKEVLPETIKRCWRKCDMLPSAVHADLDEDVGKNMRNKKESLEELTDLVQRLSLEAKKTTVDEDLGEALKGLGLAPGATPTRASTKAVQTWLRVEDKEGVAEAIIADLKDDLCEESLAHLNMDQLNIDSDDDEADSSAGDEGQ 431
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5K3V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V5_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 2.740e-72
Identity = 118/143 (82.52%), Postives = 125/143 (87.41%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRC------WRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLA 456
            LAEG QPHILDAAELGLEAWKEV  +TIK C      WRKCDILPPAVHADLDQDVGKNI NKKE+L+ LTDLVQRLSLEAKKTT+DEDLGEAL+GLGLAPGA PT+ASMEAVQTWL   EK  VAEAIIA+LKDDLCEESLA
Sbjct:    3 LAEGAQPHILDAAELGLEAWKEVMPQTIKSCVRVVVCWRKCDILPPAVHADLDQDVGKNIRNKKESLEELTDLVQRLSLEAKKTTVDEDLGEALEGLGLAPGATPTRASMEAVQTWLRAAEKEGVAEAIIADLKDDLCEESLA 145
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5JV28_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV28_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.690e-68
Identity = 111/134 (82.84%), Postives = 118/134 (88.06%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEE 447
            LAEG QPHILDAAELGLEAWKE   ETIKRCWRKCD LPPAVHADLDQDVGKNI NKKE+L+ LTD VQRLSLE KKTT+DEDLGEALKGLGL PGA PT+AS+EAVQTW+  EEK  VAEAIIA+LKDDLC E
Sbjct:  171 LAEGAQPHILDAAELGLEAWKEFLPETIKRCWRKCDTLPPAVHADLDQDVGKNIRNKKESLEELTDSVQRLSLETKKTTVDEDLGEALKGLGLTPGATPTRASIEAVQTWMRAEEKEGVAEAIIADLKDDLCGE 304
[Close]
BLAST of Ec-00_003970.1 vs. uniprot
Match: A0A6H5JJP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP0_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.160e-68
Identity = 127/178 (71.35%), Postives = 132/178 (74.16%), Query Frame = 1 
Query:   46 LAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKCDILPPAVHADLDQDVGKNIPNKKENLD*LTDLVQRLSLEAKKTTLDEDLGEALKGLGLAPGAAPTQASMEAVQTWLGVEEKADVAEAIIANLKDDLCEESLAQLXXXXXXXXXXXXXADSSAGDEGQCTQPLVSPRPPPYADV 579
            LAEG QPHILDAAELGLEAWKEV  ETIKRC                 DVGKNI NK E+L+ L DLVQRLSLE KKTT+DE LGEALKGLG APGA P +ASMEAVQTWL VEEK  VAEAIIA+LKDDLCEESLA L             ADSSAGDEGQCTQPLVSPRPPPYADV
Sbjct:  315 LAEGAQPHILDAAELGLEAWKEVLPETIKRC-----------------DVGKNIRNK-ESLEELMDLVQRLSLETKKTTVDEHLGEALKGLGFAPGATPPRASMEAVQTWLRVEEKEGVAEAIIADLKDDLCEESLAHLNMDQLNIDSDDDEADSSAGDEGQCTQPLVSPRPPPYADV 474
The following BLAST results are available for this feature:
BLAST of Ec-00_003970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5K2E1_9PHAE7.510e-12383.63HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JRP4_9PHAE5.290e-12283.19HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JHY0_9PHAE1.950e-11365.42DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JB59_9PHAE3.020e-10676.11DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K2U1_9PHAE9.940e-10075.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH8_9PHAE1.320e-9976.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT98_9PHAE1.680e-7678.40DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K3V5_9PHAE2.740e-7282.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV28_9PHAE1.690e-6882.84DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JJP0_9PHAE4.160e-6871.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4745992..4746896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length728
Hectar predicted targeting categoryother localisation
Gene idEc-00_003970.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003970Ec-00_003970Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4745992..4746896 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003970.1.2Ec-00_003970.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4745992..4746585 -
Ec-00_003970.1.1Ec-00_003970.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4746763..4746896 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0039703UTR:Ec-00_003970.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 4745992..4746485 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003970.1CDS:Ec-00_003970.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4746486..4746585 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003970.1Ec-00_003970.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4746486..4746896 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003970.1 ID=Ec-00_003970.1|Name=Ec-00_003970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=78bp
MDCAVCLTRLATTRWLAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKC
DILPPAVHADLDQDVGKNIPNKKENLD*
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spliced messenger RNA

>Ec-00_003970.1 ID=Ec-00_003970.1|Name=Ec-00_003970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=728bp|location=Sequence derived from alignment at chr_00:4745992..4746896- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGTGCGGTGTGCCTGACCCGCTTAGCGACAACGAGATGGCTCGC
GGAAGGAGGGCAGCCTCACATCCTGGACGCAGCTGAGCTAGGCCTCGAGG
CGTGGAAGGAAGTGTCGGCGGAGACAATCAAGAGGTGCTGGAGGAAATGT
GACATCCTTCCTCCAGCGGTGCACGCGGACCTCGACCAGGATGTGGGAAA
GAATATCCCCAACAAGAAGGAGAATCTCGACTAGCTGACGGACTTGGTGC
AGCGTCTTTCTCTGGAGGCGAAGAAGACAACTCTCGATGAAGACCTTGGC
GAGGCACTTAAGGGTCTGGGGTTGGCACCTGGCGCAGCGCCAACCCAGGC
TTCCATGGAAGCCGTGCAGACATGGTTGGGTGTAGAGGAGAAAGCGGACG
TGGCGGAGGCCATTATTGCAAATCTGAAGGACGATCTTTGTGAGGAGTCG
CTTGCCCAACTAAACTTAGACCAACTGAACCTAGACTCGGACGACGACGA
GGCCGACTCTTCGGCGGGAGACGAGGGCCAGTGTACGCAGCCCCTGGTCT
CTCCTCGTCCGCCTCCATACGCTGACGTATCTAGGCAGTTCGGGGACCTC
GAAGAAATAGCAGAGAGGTGCAGCATGGCCGGGGTAGCGTACCATCTTCG
CAAGGCGAAGTTAGCCTGGATGAGCGAGGCTGGGTCAAGGAAAACGAAGC
AAACATGCATGGCAGACTTCATGTAAAG
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protein sequence of Ec-00_003970.1

>Ec-00_003970.1 ID=Ec-00_003970.1|Name=Ec-00_003970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=78bp
MDCAVCLTRLATTRWLAEGGQPHILDAAELGLEAWKEVSAETIKRCWRKC
DILPPAVHADLDQDVGKNIPNKKENLD*
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mRNA from alignment at chr_00:4745992..4746896-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003970.1 ID=Ec-00_003970.1|Name=Ec-00_003970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=905bp|location=Sequence derived from alignment at chr_00:4745992..4746896- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACTGTGCGGTGTGCCTGACCCGCTTAGCGACAACGAGATGGCTCGC
GGAAGGAGGGCAGCCTCACATCCTGGACGCAGCTGAGCTAGGCCTCGAGG
CGTGGAAGGAAGTGTCGGCGGAGACAATCAAGAGGTGTGTGCGTATATTA
TAGGTTGACGAAATATTGTTCACTAATGCCATCATCGTGCACCTTTTGTT
TGTATTTGAAGAAGCGTTTTTTTTCACAAGTTGTACAGCTCGTTCTGTTT
TATTTTCACCGTGCATGTTCTTTTCTCCTTCCCGCGTACTTGGCTATTCT
TTGTTTACAAGGTGCTGGAGGAAATGTGACATCCTTCCTCCAGCGGTGCA
CGCGGACCTCGACCAGGATGTGGGAAAGAATATCCCCAACAAGAAGGAGA
ATCTCGACTAGCTGACGGACTTGGTGCAGCGTCTTTCTCTGGAGGCGAAG
AAGACAACTCTCGATGAAGACCTTGGCGAGGCACTTAAGGGTCTGGGGTT
GGCACCTGGCGCAGCGCCAACCCAGGCTTCCATGGAAGCCGTGCAGACAT
GGTTGGGTGTAGAGGAGAAAGCGGACGTGGCGGAGGCCATTATTGCAAAT
CTGAAGGACGATCTTTGTGAGGAGTCGCTTGCCCAACTAAACTTAGACCA
ACTGAACCTAGACTCGGACGACGACGAGGCCGACTCTTCGGCGGGAGACG
AGGGCCAGTGTACGCAGCCCCTGGTCTCTCCTCGTCCGCCTCCATACGCT
GACGTATCTAGGCAGTTCGGGGACCTCGAAGAAATAGCAGAGAGGTGCAG
CATGGCCGGGGTAGCGTACCATCTTCGCAAGGCGAAGTTAGCCTGGATGA
GCGAGGCTGGGTCAAGGAAAACGAAGCAAACATGCATGGCAGACTTCATG
TAAAG
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Coding sequence (CDS) from alignment at chr_00:4745992..4746896-

>Ec-00_003970.1 ID=Ec-00_003970.1|Name=Ec-00_003970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=234bp|location=Sequence derived from alignment at chr_00:4745992..4746896- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACTGTGCGGTGTGCCTGACCCGCTTAGCGACAACGAGATGGCTCGC
GGAAGGAGGGCAGCCTCACATCCTGGACGCAGCTGAGCTAGGCCTCGAGG
CGTGGAAGGAAGTGTCGGCGGAGACAATCAAGAGGTGCTGGAGGAAATGT
GACATCCTTCCTCCAGCGGTGCACGCGGACCTCGACCAGGATGTGGGAAA
GAATATCCCCAACAAGAAGGAGAATCTCGACTAG
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Synonyms
The feature 'Ec-00_003970.1' has the following synonyms
Synonym
Esi0310_0010
Esi_0310_0010