Ec-00_003910.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003910.1
Unique NameEc-00_003910.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length298
Homology
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BLAST of Ec-00_003910.1 vs. uniprot
Match: D7FV01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV01_ECTSI)

HSP 1 Score: 596 bits (1537), Expect = 1.970e-215
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1 
Query:    1 MEADESEAMIAAAAAAVAHVQNLTQEMDCGDEEFGFDGFAQEADGEASWLGDDEEXXXKERQTRRSYARPDYDASAWAVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV 891
            MEADESEAMIAAAAAAVAHVQNLTQEMDCGDEEFGFDGFAQEADGEASWLGDDEEXXXKERQTRRSYARPDYDASAWAVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV
Sbjct:    1 MEADESEAMIAAAAAAVAHVQNLTQEMDCGDEEFGFDGFAQEADGEASWLGDDEEXXXKERQTRRSYARPDYDASAWAVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV 297
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 1.350e-96
Identity = 138/205 (67.32%), Postives = 161/205 (78.54%), Query Frame = 1 
Query:  277 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV 891
            K YPGAENDKT+I+R K +WRIRDEEPWKS K+KL NADGTETE TGAW+IVDGGYPKIPLL+PPIKTHN++E H  SRR+ES+RKDIECCFGRVKG WRLF G+I F +R K+DNAW TACILHNMLH FN LDEMEEDADW+GSA  L +     V M  ++E    +E    GF+ FR KL+AHFA  W  K++ WF RA+V
Sbjct:  108 KTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDADWMGSAARLREATAVGVAMDVDEE----SEPPTSGFEEFRRKLIAHFACAWEKKEILWFTRAEV 308
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.180e-77
Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 1 
Query:  277 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV 891
            K YPGAENDK +I+RDKS+WR+RDE+PWKS K+KL NADGTETEYTGAW+IVDGGYPKIPLL+PPIKTHN++E H+ SRR+ES+RKDIECCFGRVKGRW LF G+I F                       N LDEMEEDADWVGS G LG+       M   +E    +ET  P F+  R KL+AHF   W  K+  WFKRA++
Sbjct:  126 KTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKGRWMLFSGDIFF-----------------------NRLDEMEEDADWVGSGGRLGEATTVAAAMDVGEE----SETPTPRFEESRKKLIAHFTCAWEEKETLWFKRAEI 303
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.080e-76
Identity = 125/233 (53.65%), Postives = 148/233 (63.52%), Query Frame = 1 
Query:  277 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPK----------------------------IPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV 891
            K YPGAENDKT+I+RDKS+WRIRDEEPWKS              YT AW+IVDGGYPK                            IPLL+PPIKTHN++E H  SRR+ES+RKDIECCFGRVKGRWRLF G++ F +R+K+DNAW TACILHNMLH FN LDEMEED  WVGSAG LG+       M  ++E    +E   PGF+ FR +        W  K++ WFKRA+V
Sbjct:   86 KTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGEATAVAAAMDVDEE----SEAPTPGFEEFRRE--------WEKKEILWFKRAEV 293
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 3.510e-73
Identity = 106/155 (68.39%), Postives = 124/155 (80.00%), Query Frame = 1 
Query:  277 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQ 741
            K YPG+ENDKTII RDKS+WRIRDEEPW S+KYKL NADG+ETEY GAWL+VDGGY KIPLL+PPIK H ++E H  SRR+ES+RKDIECC+GRVKGR+RLF+  I + +R+ IDN W TACILHNMLH ++ LD M E   W GSA  LG   Q
Sbjct:   97 KSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQGSARPLGGASQ 251
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 2.200e-72
Identity = 117/184 (63.59%), Postives = 135/184 (73.37%), Query Frame = 1 
Query:  277 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKL 828
            K  PGAENDKT+I+RDKS+WRIRDEEPWKS              YT AW+IVDGGYPKIPLL+PPIKTHN++E H  SRR+ES+RKDIECCFGRVKGRWRLF G+I F +R+K DNA  TACILHNMLH FN LDEMEEDADWVGSAG LG+       M  ++E    +ET  P F+    +L
Sbjct:  173 KTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGEAAAVAAAMDVDEE----SETPTPDFEEXHKRL 339
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5KCK8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 4.630e-63
Identity = 106/186 (56.99%), Postives = 123/186 (66.13%), Query Frame = 1 
Query:  277 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPK--------------IPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLF--------------------RGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGD 732
            K YPGAENDKT+I+RDKS+WRIRDEEPWKS               T AW+IVDGGYPK              IPLL+PPIKTHN+++ H  SRR++++RKDIECCFGRVKGRWRLF                     G+I F +R+K+DNAW TACILHNMLH FN LDEMEED  WVGSAG LG+
Sbjct:   72 KTYPGAENDKTVIARDKSIWRIRDEEPWKSYD-------------TRAWIIVDGGYPKASFGCCHFRSAVSQIPLLIPPIKTHNTVKEHDWSRRLDNMRKDIECCFGRVKGRWRLFGVPVGNNAFSQRXXXXXXXXXGDILFSARQKVDNAWFTACILHNMLHSFNRLDEMEEDGVWVGSAGRLGE 244
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 4.950e-59
Identity = 109/218 (50.00%), Postives = 140/218 (64.22%), Query Frame = 1 
Query:  214 YDASAWAVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGD------MPQQPVGM-GDEKEXXXXTETAAPGFDGFRAKLVAHFAY 846
            Y+AS     D +GR       K +PGAENDKT++ RD SV R+R+EEPW S K+ L + +G  TE+TG WLIVDGGY ++P L+ P K + S  +   S+R ES+RKDIEC FGR+KGR+RLF+  I FG+REKIDNAW TACI+HNMLH+F+GL  +E+D DW G  GE         +P   V   G+E +    TE     F  FR +LV H AY
Sbjct:  216 YEASC----DHSGRILS--STKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGEEVDDGDNTEA----FKLFRQQLVNHVAY 423
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 4.430e-58
Identity = 103/209 (49.28%), Postives = 131/209 (62.68%), Query Frame = 1 
Query:  232 AVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGEL----GDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAY 846
            A+ D AGR       K YPGAENDKT++ RD SV R+  EEPW S KY++ +  G  TE+TG WLI +GGY ++PLL+ P K + ++     S+R+ESVRKDIEC FGR+KGR+RLF+  I FG R KID+AW TACI+HNML  F+GLD++E D DW G  GE     G  P   V    E +     + A   F   R  LV HFA+
Sbjct:   84 AICDHAGRIL--ASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAA---FHAHRQCLVDHFAF 287
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BLAST of Ec-00_003910.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.180e-57
Identity = 107/220 (48.64%), Postives = 136/220 (61.82%), Query Frame = 1 
Query:  232 AVRDVAGRRCPPLELKCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGEL----GDMPQQPVGMGDEKEXXXXTETAAPGFDGFRAKLVAHFAYMWRIKQVFWFK 879
            A+ D AGR       K YPGAENDKT++ RD SV R+  EEPW S KY++ +  G  TE+TG WLI DGGY ++PLL+ P K + ++     S+R+ESVRKDIEC FGR+KGR+RLF+  I FG R KID+AW TACI+HNML  F+GLD++E D DW G  GE     G  P   V    E +     + A   F   R  LV HFA+     +V WF+
Sbjct:  316 AICDHAGRIL--ASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAA---FHAHRQCLVDHFAFAKSSSEVQWFR 530
The following BLAST results are available for this feature:
BLAST of Ec-00_003910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV01_ECTSI1.970e-215100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU81_9PHAE1.350e-9667.32DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K4F4_9PHAE1.180e-7759.02DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KVL5_9PHAE1.080e-7653.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K604_9PHAE3.510e-7368.39Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7N8_9PHAE2.200e-7263.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCK8_9PHAE4.630e-6356.99DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JV45_9PHAE4.950e-5950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE4.430e-5849.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L0H2_9PHAE1.180e-5748.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4454851..4457346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score134.8
Seed ortholog evalue6.6e-29
Seed eggNOG ortholog2880.D7FSK2
Length894
Hectar predicted targeting categoryother localisation
Gene idEc-00_003910.1
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003910Ec-00_003910Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4454851..4457346 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003910.1.1Ec-00_003910.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4454851..4455082 +
Ec-00_003910.1.2Ec-00_003910.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4455235..4455281 +
Ec-00_003910.1.3Ec-00_003910.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4456213..4456383 +
Ec-00_003910.1.4Ec-00_003910.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4456903..4457346 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003910.1CDS:Ec-00_003910.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4454851..4455082 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003910.1Ec-00_003910.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4454851..4457346 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003910.1 ID=Ec-00_003910.1|Name=Ec-00_003910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=298bp
MEADESEAMIAAAAAAVAHVQNLTQEMDCGDEEFGFDGFAQEADGEASWL
GDDEEEEEKERQTRRSYARPDYDASAWAVRDVAGRRCPPLELKCYPGAEN
DKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPK
IPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPF
GSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPV
GMGDEKEEEEETETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV*
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spliced messenger RNA

>Ec-00_003910.1 ID=Ec-00_003910.1|Name=Ec-00_003910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=894bp|location=Sequence derived from alignment at chr_00:4454851..4457346+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGCGGACGAAAGTGAAGCGATGATTGCCGCCGCAGCTGCTGCAGT
GGCCCATGTGCAGAATCTGACTCAAGAAATGGATTGCGGGGACGAGGAGT
TTGGGTTTGATGGGTTCGCTCAAGAAGCAGATGGAGAGGCCAGCTGGCTC
GGCGACGATGAGGAGGAGGAGGAGAAAGAACGGCAGACACGTCGGTCTTA
CGCGCGCCCAGACTACGACGCCTCGGCCTGGGCCGTGCGCGACGTCGCGG
GCCGGCGTTGCCCCCCTCTCGAACTGAAGTGCTACCCGGGCGCCGAGAAC
GACAAGACAATCATCTCTCGCGACAAGTCCGTCTGGCGCATCAGGGACGA
GGAACCCTGGAAGAGCATGAAGTACAAGCTCAGGAACGCCGACGGCACAG
AGACGGAGTACACAGGAGCGTGGCTCATTGTAGACGGGGGGTACCCGAAG
ATCCCCCTGCTCATGCCGCCAATCAAGACGCACAACTCTATCGAGAGGCA
CTCATGCAGCAGGCGCATGGAGAGCGTTCGCAAGGACATCGAGTGCTGCT
TCGGCAGAGTGAAAGGGCGCTGGCGTCTTTTCAGGGGCAACATCCCTTTC
GGCTCTCGAGAGAAGATCGACAACGCCTGGTTAACGGCGTGCATTCTGCA
CAACATGCTCCACAAGTTCAACGGGCTGGACGAGATGGAGGAGGATGCTG
ACTGGGTAGGGTCGGCTGGGGAATTGGGCGACATGCCCCAGCAGCCTGTC
GGCATGGGCGACGAGAAGGAGGAGGAGGAGGAAACCGAAACCGCAGCCCC
GGGCTTCGACGGATTCCGCGCGAAACTTGTGGCCCACTTCGCCTACATGT
GGCGGATCAAGCAGGTGTTTTGGTTTAAGAGGGCGCAAGTGTAG
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protein sequence of Ec-00_003910.1

>Ec-00_003910.1 ID=Ec-00_003910.1|Name=Ec-00_003910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=298bp
MEADESEAMIAAAAAAVAHVQNLTQEMDCGDEEFGFDGFAQEADGEASWL
GDDEEEEEKERQTRRSYARPDYDASAWAVRDVAGRRCPPLELKCYPGAEN
DKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPK
IPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPF
GSREKIDNAWLTACILHNMLHKFNGLDEMEEDADWVGSAGELGDMPQQPV
GMGDEKEEEEETETAAPGFDGFRAKLVAHFAYMWRIKQVFWFKRAQV*
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mRNA from alignment at chr_00:4454851..4457346+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003910.1 ID=Ec-00_003910.1|Name=Ec-00_003910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2496bp|location=Sequence derived from alignment at chr_00:4454851..4457346+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGGCGGACGAAAGTGAAGCGATGATTGCCGCCGCAGCTGCTGCAGT
GGCCCATGTGCAGAATCTGACTCAAGAAATGGATTGCGGGGACGAGGAGT
TTGGGTTTGATGGGTTCGCTCAAGAAGCAGATGGAGAGGCCAGCTGGCTC
GGCGACGATGAGGAGGAGGAGGAGAAAGAACGGCAGACACGTCGGTCTTA
CGCGCGCCCAGACTACGACGCCTCGGCCTGGGGTACGTGGCTGAAGAAGC
TAGGGGAGATGAGCGCCACCCAGGCGGCGTCGATCCCGGCTGCAGGGAGG
CAGATGAATTTGTTCGCCATTTTCGCGTGACGTATCCCATTTTCCTCCAC
ATCCTCCATGCGGTCCGCCCGGTGTTCACGTCAGCCGTGCGCGACGTCGC
GGGCCGGCGTTGCCCCCCTCTCGAACTGAAGGTGTGTAGCAGCAGCAACC
CTGGTTACGTATCTATCCTCAGCGTGCTTATTTTTAGAGTACTGTTGCAC
GTGGGGGTAGTGCAGCAGCAGTAGTTGTGATGTTTCGCGGGGGAACACAG
CAGTGCCTCTCCTTCTCCGATTGTATTCTACACAACAGCAGTCGGTGTGT
CAACGGCGGCGCGCACAGCAGTGTCGCAAACGCAGCTTCAGCTGTGCGCT
TCGACAAGTATGAGAATCCCAGCAGCAGCCCACTATAGATGTCTGGGGTT
GCTTCCAACGACGTGCATCAGTCGGTGTTTTGTGTGCACATGTGCGTAGA
AAGGACAACGAGCACCAGTCCTGGTTCAATTCTGTCCGTGTTGAGACCAC
GACATGGTCGACACCGCATGTCGGAGAGATCAAACAATACCATGACGCCT
GAGACATGCCATACGCAATAGTGAGACGGCACATTTTAGCATTCGGTTTG
ACGCAGCTGCTGGAACGTGGGGCGATGCTTGTCGAACACCGGAGTACTAG
TTGTTTTTTATTCACGTGTACCCGCCCATACTTCCGCCGCACGTATGCAT
ATGCAGATCTTGGGAGCGTTGAAATCTTGGCATCTGGATGCACCTTTGGG
GATGTCGCCGCCATGTCTGGGATGAGCCGTACGACAGCAGAGACTTCTTT
CTACACGTTCACCGAGGAGTTTGCCAAGGCCCTGTGGGACACATGGGTTA
CACTTCCCGTGGGAGAGGATCTGAAGAGCGTGGAGGCTATCTACCGCAAG
TGTGGTCTTGCCGGGGCGGTGGGCTCGATCGACTGCAACCACTTCAAGTG
GGATCGATGCCCCTGGTCGGAACAACGCATCCACACCGGCAAGGAGGGCT
ATCCCTCTGTCGTAGTGGAGGCGATGTGTGACCATGCTGGCCGCATTCTT
GCGGCCACCAAGTGCTACCCGGGCGCCGAGAACGACAAGACAATCATCTC
TCGCGACAAGTCCGTCTGGCGCATCAGGGACGAGGAACCCTGGAAGAGCA
TGAAGTACAAGCTCAGGAACGCCGACGGCACAGAGACGGAGTACACAGGA
GCGTGGCTCATTGTAGACGGGGGGTACCCGAAGGTCAGTACATGTAGCAG
GAGGGCAGAGTAAAGCTCTTGGGTTTACCGCGGCGTAGATGAGCTATACG
TTCAATTACGTTATACATTCAAAAGTGTTGGGCGCAATAAAAATAGTTGG
CAATGTGTGGGTTCTTCAAGGGTGGGTAAGAGAGAGCATGCCGTTGCAGT
CCCCCAACAATGGTTAGTGATTCGTGGTGTGGGTTGCCATAGACGCGCAA
TCCGCTGTTGTCCCGTTTGTGATGTAGTATAAACAAAAAAAAATACTTGA
GTCGATAGGGCTTTGTACGGAGCTGTGTGCTCATTATATTGTGTCGTATT
TTTTATTTCTCTCCGTCGCAAGTAAGAAGAATCCCCCGCCATGTTACATC
GATTCATGCCATTGAAATCACCCAGCAGTAGCACTTGACGTCACAAAATC
TCCAGCGGCGACGCTTCTGTGTTATGTTGATCAGGTCATGTTCGTCTTCA
GCAACTTGAACTGAGTGCCGAAATTGTGCCGACACAATCGCTCTGTTTGC
AGATCCCCCTGCTCATGCCGCCAATCAAGACGCACAACTCTATCGAGAGG
CACTCATGCAGCAGGCGCATGGAGAGCGTTCGCAAGGACATCGAGTGCTG
CTTCGGCAGAGTGAAAGGGCGCTGGCGTCTTTTCAGGGGCAACATCCCTT
TCGGCTCTCGAGAGAAGATCGACAACGCCTGGTTAACGGCGTGCATTCTG
CACAACATGCTCCACAAGTTCAACGGGCTGGACGAGATGGAGGAGGATGC
TGACTGGGTAGGGTCGGCTGGGGAATTGGGCGACATGCCCCAGCAGCCTG
TCGGCATGGGCGACGAGAAGGAGGAGGAGGAGGAAACCGAAACCGCAGCC
CCGGGCTTCGACGGATTCCGCGCGAAACTTGTGGCCCACTTCGCCTACAT
GTGGCGGATCAAGCAGGTGTTTTGGTTTAAGAGGGCGCAAGTGTAG
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Coding sequence (CDS) from alignment at chr_00:4454851..4457346+

>Ec-00_003910.1 ID=Ec-00_003910.1|Name=Ec-00_003910.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=894bp|location=Sequence derived from alignment at chr_00:4454851..4457346+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGGCGGACGAAAGTGAAGCGATGATTGCCGCCGCAGCTGCTGCAGT
GGCCCATGTGCAGAATCTGACTCAAGAAATGGATTGCGGGGACGAGGAGT
TTGGGTTTGATGGGTTCGCTCAAGAAGCAGATGGAGAGGCCAGCTGGCTC
GGCGACGATGAGGAGGAGGAGGAGAAAGAACGGCAGACACGTCGGTCTTA
CGCGCGCCCAGACTACGACGCCTCGGCCTGGGCCGTGCGCGACGTCGCGG
GCCGGCGTTGCCCCCCTCTCGAACTGAAGTGCTACCCGGGCGCCGAGAAC
GACAAGACAATCATCTCTCGCGACAAGTCCGTCTGGCGCATCAGGGACGA
GGAACCCTGGAAGAGCATGAAGTACAAGCTCAGGAACGCCGACGGCACAG
AGACGGAGTACACAGGAGCGTGGCTCATTGTAGACGGGGGGTACCCGAAG
ATCCCCCTGCTCATGCCGCCAATCAAGACGCACAACTCTATCGAGAGGCA
CTCATGCAGCAGGCGCATGGAGAGCGTTCGCAAGGACATCGAGTGCTGCT
TCGGCAGAGTGAAAGGGCGCTGGCGTCTTTTCAGGGGCAACATCCCTTTC
GGCTCTCGAGAGAAGATCGACAACGCCTGGTTAACGGCGTGCATTCTGCA
CAACATGCTCCACAAGTTCAACGGGCTGGACGAGATGGAGGAGGATGCTG
ACTGGGTAGGGTCGGCTGGGGAATTGGGCGACATGCCCCAGCAGCCTGTC
GGCATGGGCGACGAGAAGGAGGAGGAGGAGGAAACCGAAACCGCAGCCCC
GGGCTTCGACGGATTCCGCGCGAAACTTGTGGCCCACTTCGCCTACATGT
GGCGGATCAAGCAGGTGTTTTGGTTTAAGAGGGCGCAAGTGTAG
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Synonyms
The feature 'Ec-00_003910.1' has the following synonyms
Synonym
Esi0284_0035
Esi_0284_0035