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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 264 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-00_003900.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_003900.1 ID=Ec-00_003900.1|Name=Ec-00_003900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=88bp MMGAVRTEKEDSLQQTFGIETDLPITGMCDNVARVLERPRDIEIEAPPES LSGWFTTWRRRQLPHHHRRRRRLPQPRHRSPPPLHRQ* back to topspliced messenger RNA >Ec-00_003900.1 ID=Ec-00_003900.1|Name=Ec-00_003900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=264bp|location=Sequence derived from alignment at chr_00:4429762..4438204+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGATGGGGGCCGTCCGCACGGAGAAAGAGGACAGCCTGCAGCAGACATT TGGCATAGAAACAGATCTCCCAATCACTGGCATGTGCGACAATGTTGCTC GTGTGTTGGAGAGACCCCGAGACATCGAAATCGAGGCTCCACCTGAAAGC TTATCGGGCTGGTTTACGACCTGGCGCCGCCGGCAACTTCCACACCACCA TCGCCGGCGCCGCCGTCTACCGCAGCCACGCCACCGTTCACCACCGCCGC TGCACCGTCAGTAA back to topprotein sequence of Ec-00_003900.1 >Ec-00_003900.1 ID=Ec-00_003900.1|Name=Ec-00_003900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=88bp
MMGAVRTEKEDSLQQTFGIETDLPITGMCDNVARVLERPRDIEIEAPPES LSGWFTTWRRRQLPHHHRRRRRLPQPRHRSPPPLHRQ* back to topmRNA from alignment at chr_00:4429762..4438204+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-00_003900.1 ID=Ec-00_003900.1|Name=Ec-00_003900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8443bp|location=Sequence derived from alignment at chr_00:4429762..4438204+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGATGGGGGCCGTCCGCACGGAGAAAGAGGACAGCCTGCAGCAGACATT
TGGCATAGAAACAGATCTCCCAATCACTGGCATGTGCGACAATGTTGCTC
GTGTGTTGGAGAGACCCCGAGACATCGAAATCGAGGCTCCACCTGAAAGC
TTATCGGGCTGGTTTACGACCTGGTGAGAGGAGAGGCGCAGAGTAGGCTT
TCGTTTGACGATGCTTACTTGCGAGAGGATTTAGAAATGAACAACAACGC
TTGCAAACAGTTCGGTTACTTGCGTCGATACGTTACTCCGAAATGGTCAC
CGGTAGTCCGTTTAGTGGTTAACCTCGCAAACCTGCTAGTAGCAGGTTGC
GGGTCAGATTATCTGCCTGGAGGTGTTTTGTCTTGGCTACAATTTCGTGT
TGTCGGCAGGTGACGAGGTGGAGCGCGGCGTGCCTGTCAACGTATTAATC
CGGTACAACACTCGAATGCTTACGCTTCGAAACTGGTAATAACGATTTCG
TTGCGATGCATATCATGATCATAAGGCTACTAACAAACTCAACTCTGCGA
TAGACAGTATCGCGACGATCGAGACTGTTGGGTTAGCAGCAGGTGGTCCA
GCTGGGCAAGCAGCTGGTGGAAGTAGAGCATACGGCGGAGGTGGGTCCGA
CGGTGGATACGGGGCCAACGAGAGAACGGCCCACAGAAAAAAAAAATGAA
ACTCCCCGGCTTATGACGGGGACTTCGCCGTCTTCCCACTCTTGTCTTTC
GGCCTAGAAGACTCTGTTCGTGGGTCTACGGACATGGTTTGGATATGTTA
GCCGTACGTACAAGTGTGGCGCAGATGGTGTAGAACCTTTTAGGTAGGGG
TACGGTGATGATGCACCGGGGCCCCCTTTTGTTGTGTGCAGCAGCCCTGC
TGCCACTCCTCCTTTCTGAGCACGACAGCGCCCTGGGTACGGGCGTTGCC
TCACCGTCTGAAGTTAATACACTACACAAACAATACCCGATAAGTACGCG
GAGTACGGCCGACAAACACTCTAGAGTTATTTGTCCTTCGAGGGATAGCC
GCATCGGGTGATGGCTGTGTCGGACAGCGGTTCGGTCGAAGGGCTGGGGG
AAGAGACCTCAGCCATGCAACAGCAACACGCCGAGGACCCGGCGATTGCG
AGACTGGAGGGCCAGTTATCGCAGCTGATGAGCATAGTGATGGAGCTTAA
GAGGAAGGAGCCTGGCGACGCCGTGGCGGGCGATGCCAGTAGGGGCGGCG
GTGCTGCCGTCCCAAGCCAGAGAGAGTCCTTGCCGTCAGAGGGCGGCAGG
GCATTTTCCCGGGAAGCGGCCCGTGATGGGCCAAATCACCCGCGGGAAAG
CCGCTGGGACAACATACCGGGAGCGAGTCCTGGGGTTCCAGCGAGAGTGG
GGCCTGGCGTAGGAGCTGACCGCGGGGAAGCGAGGGGGTTAAACCCCCCA
GAGTACCAACAAGCGAAGTTCCTGTTGGAGACGGCGACAAAGCTGGACAG
GGGCGAGATCGTCAGGATCGTAAGCACGGTGCACGCGAGCCTCCCGGAGG
GGAGGAAGGCCCCGAAGGGCCAGCGGAAGGCGGAGCATGCTTTCCTCGCG
AGCGACGGTAACAGCAGGGGTGGAGCGCCCGGCCGCAGCAGCGGCGGCCG
CAACAAGGGTGGCGGCGGCGGTGGTGGCGGCCAGAACGGGAAAGGGGCTG
GCAGCAAGGGCGGTGGGGGCGGTGGTGGTGGCAACAGCGGCGGAGGCGGC
GGCGGCGGTGCGAGTAGCATGCACGGCCGCTGCTTCCGGTGCGGAGAGAA
GGGTCACCAGGCGGCCGCCTGTACCAAGCCCGAGCCCCTGCGATGCGAGA
AGTGCCTGGGCTACGGACACGACAAGAGCACGTGCTCGTCCGAGCAGGCG
GTGCTCGCGGTGGAGCTGCCGGTCTTGGACGCCACCGCACTGGACGTGGC
AGAGGAGGCGCTAGTGGTCCGTGACTTCACAGGCGAGTGGAACAGAGTCG
TTGATCGAGGGGGTGTAGAGCAGGCCAGGCAGGAAAGGTTTGTGGCCGAT
ACCGGCGCAACCAACCACATGTTCCCGAGCGCTAACGCGTTCGAAAACTA
CCATGAGTGCGATCGACGTTTGAGTCTCGCCGCAGGGAAGCAAGCCTTCG
CCATCGTAGGGTATGGCGACGTGAGGGTGACCATCGGTTCTCGCGTTGGG
ACCACAGACCTGTTGTTGAAACGGGTCGCTCATGTGCCGGAGCTCAACTA
CAACCTCGTGTCCCTCACAGCCCTCTTGAAACAAACCAAGGGCCGCTTAG
CCGCAGATGAGAACGAGTTGGAGGTGTTCGTTGGTGGGGGGGAGTCGGTG
TACTTCCCTCTATGGGGGGACCTGTTCGTTCAGACTGGTCACCGCGTAGA
GTCGGGTAGGGAACTAGCCTGTGCCATAATTGCTCCTGGTAACGCGAAAG
CGAACCGCACCCCCGTTGACATCAACGACTTCCACTGCGCGCACGGCCAC
TCCCACGAGGTGCTGCTGAAGAACACGGCGAAGCAGCAAGGGGTGACGCT
GGTGGGCCAGCTCCGGGAGTGCATGGTTGCGGGCTGTGTCCCAATGGCAG
GAGTAGGAGGCTTGCCTCGCATTCTTGTCTTCGCCTTGGCCTTCCTGATA
AGTGCGGCCGTTGTGATCCGCCGTGATAGCAATGGTTTGTGTTGGATGGG
ATTTATTTTCGAGGGGTTTTGCCCGGGCGCCGGGTTTCCCCTGGACCACC
GTATTGGCATTTTAATGATGTATCCGGGGTGTTTTTGCCCCACTGATGGT
TAGTCACTTGCGTGAAGAACCAGGGAGGGTGTTGGTGGGTCTACGGACAT
GGTTGGGATATGTTAGCCGTACGTACAAGTGTGACGCAGATGGTGTAGAA
CCTTTTAGGTAGGGGTACGGTGATGATGCACCGGGGCCCCCTTTTGTTGT
GTGCAGCAGCCCTGCTGCCATTCCTCCTTTCTGAGCACGACAACGCCCTG
GGTACGGGCGTTGCCTCACCGTCTGAAGTTAATACACTACACAAACAATA
CCCGATAAGTACGCGGAGTACGGCCGACAAGCAGACTCCAATCGGCGCAA
GCACCGGTAGGAGAGTGCGTGAAAGATGCCGTGACAGCACAACTCCACTT
TCCTACGACATCTATGCACATGCTGTCGTTGTAGCACCACGTATGTGGAA
AATCTCGGAGGGATCCTCCTGCGCGGTAACGACAACGTCGTGAGAGCTCT
GCGTGTGTACCTGTCGTCGATACATGTGGCAGCCGCACGACACACGAAAG
GATGTTTGCATCGCATTGTAGTATGGTTCGCCGTGGCAGGAAATATCTCG
TCCAGTTAGGTCTGTAGCAAAAACACAGCAGCAGCAGTAATCGAGCTATG
CATGCAACGTTTTGCTGTGGCTGCAGGCAGACGTTTCGCCTCCACGTCTC
GAGAATCCCACTCCTGTATCTCGACCTACAAGACTCCAATCAACAAACCA
GCACTGGAAGAAGTGCGTGGGAGATGCCGTGTGATAGATATACTTGTAGC
AATGCCAAGTGGTTGATACGGAATGTTCCCATCATGTTATATATATACTT
ACAGGATGGTCGTCGTGACGTGAACATTTTGTTGTTATTAGTATGGAAAA
AAATAAAAAAAAAGATGGCTCGATTTTTGAATTTCTACAGCAGTATGGAC
CAGACGCCGACTTTACATGGAAGTCGTACGAATGTCGACTTAGTTGTGCT
GTCACAGCATCTTCCACGCACTTCTGCCAGTGCTGGTTTGTTGATCGGAG
TCTTGTAGGTCGAGATACAGCGGTGGGATTCTCGGGTTGTGGAGGCAAAA
GTGAACCAGAGCAAAACATTTCATGCATAGCTCGATTACTGCTGCTGTGT
TTTTGCTACAGCAGTATGGACTAGACGCCGAACGACGTCCGCGTGCTACA
AGTACCGCAACGACCTAACGGGATGGGATACTTGCTGCCACGGCGAACCA
TAGTGCAATGCGATGCAAACATCCGTTCGTGTGTCGCGCGGCTGCCACAT
GTGTCGACGACAGGTACACGTAGAGCTCTCGCCATGTTGTCGTTACCGCG
CAGGGGCACCCCTCGGAGATGTTCCACATGGTGCTACAACGACAGCAGTA
CTACTGTACATAGACGTCGAAGGAGAGTGGAGCTGTGCTGTCACGGCATC
TTCCACGCACTCTCCTACTGGTGCTTGTGTCGATTGGAGTCTTGTAGGCC
GAAATACCAGAGTGGGTTCGACTCTCGGGTTGTGGAAGCAAACCTGCCTG
CAACAACAGAGAAGGCGGTGTTCTATGTATCATAGAGTATCCCGCTCAAC
TTTTTTTTTTTCGCGGCATGTGGTCGCATATTTCTATGCCACTGTCGAAA
ACGACCGCTGGATCTTTTACGTAGTACATCTTTTGCATTTATCATTTTAC
ACTCCGACTGTACATGGAAGTCGTACGAGTGTCGAGATAGTTGTGCTGTC
ACAGCATCTTCTACGCACTTCTGCCAGGGCTGGTTTGTTGATTGGAGTCT
TGTAGGTCGAGATACAGCAGTGGGATTCTCGGGTTGTGGAGGCAAAAAGT
GAACCAGACCAAAATTTTCATGCATAGCTCGATTACTGCTGTGTTTTTCC
TACAGCAGTATGGACTAGACGTCGAACGACGTCCGCGTACTGCCGCAACG
ACCTAACTGCATGGGATACTTCCTGCCACGGCGAACCATAGTACAGTACG
ATGCAAACATCCGTTCGTGTGTCGCGCGGCCGCCACATGTGTCGACGACA
GGTACACGTAGAGCTCTCGCCATGTTGTCGCAGAAGGACCCTCCGCAGAT
CTTCCACAACATGGTGCTACAACGACAGCAGTACTACTGCAGTACATAGA
TGTCGTAGGAGAGTGAAGTTGCGTTGTCTGGGCATCTTCCACGCACTCTC
CTACCGGTGTTTGCGTCGATTGGAGTCTTGTAGGCCGAAATACAAGAGTG
GTTTGGGTCTGTTCGTGTGTGCATGAGCGGATGAGAATCTTCCAACGGGA
CTGTAGGAATTGGCTACGCAGATAGGAATTGATAGTCCCCTGGGTTGGTT
TCATGGTTGATCCACGGGGCTCGACCCTGCGAGAGTGCTTGCTGTGTCGT
GGCACTCTCTTTCTCCCGCCGCGTCCTGATCGTGCCTGCTGTCCTAAATA
CAAGTCATACCATCATCTTCAACACACTTACATGGGTATACTAACACTCT
AGAGTGTATCCCTCGCGGGAACCCGTGCTGGAGATGAGTGACGCCGATGT
TGCAGCAGAGGCTGTCGACGTCACCACTAGTACGCAGGGCAGGGTTGACA
ACCTGGAGAGCAAAGTTTCAGGCCTGACGGACGAGATACAGCAGCTGGCA
GGGCTGCTCTGAGCCGCCCTCGGAAAGTTAGACAAGGAGGTGGAGTCCGG
CGGCGCTGGGGTAGGCGCTATCATCACGGGCACTACGTCCACCGGCGGTG
CCCATGATGTCCGAGATTCGTCTAGAGAAGGACAGAGTACGGATAATAGT
GGAATGCTTGGGCGGAGATGGAGGCGCGAATGAAGAAGAAGCAGGAGAGT
GTGAGGGCTTATGCCCTCATCAGTAGCGGTGAGAACCGTAGTGGCGGGGG
CGGGAACACGGAGGGCCCAGGGAAGACGAGAGGAGAACGGAGAACGGCAA
CGCGGCAACAGCAGCAACAGCCGCAGCAGCCACAGCAGCAGCATCAGCTG
TACTTCAACCAGCAGCAACAGGTATACCCGCCGCCGTACCCGCCTGAGAT
AAAATATTGTGACCTCCACAACTCCTCGTCCCACAGCAACGAGGAGTGTC
GCTTGTAGCAAGCTTGGGGCGGCCAAGGTGCGAGCTACGGCGGAAGGCAC
GGGCCCCAGCATGGGGGCCGAGGCTTTTCTGGAGGAGGACGTCGTCAGCA
GCAGCCGGCAAGAGGAAGACACTAGGGACGTGTCGCCAATCCCGGTGGAT
GGGGCAGAGGCCCTCCTCACCAGGGAGCAACAGGCAGCAACCTTCCCGCC
TACCCCGTGTCTCAGCAGGGGTACGACTACAGCGCGTACCCTCCGAACCT
CTACCGCCCCCAAGGAAACGAGCCGCCCATCCACGCAGCAGATCCGAGAA
AGCGGTACGATAGCTGCGGTGGGATAGGTCACAACCACATCTTCAGCCCT
TCACGGGTGGATGTAGGCAGACCAGCCGGCTAGCCCACACCGCTCGCCCC
GCCCCGCCCGCCGGCCGCCGGATACAACACCCGGTGGCCCCAGTGGGCCC
ACTTCTAGGGCCAGGCTCACGGCGCACAACAGTACGGCGGGGGGGCGCAC
GAGACAGGAGCAGCGACAGGAGCGTCAGCAGGAGCGGCGGCAGGAGCACA
ACAGCAAGCGGTGATGCACGTGAGCGGCGTTTACCAAAATCCGGTGACGC
ACGCGAGCGGTGTTTACGAGTACCCGCCCCAACACCAGCAGCCGGAGTAC
CTTTCCCCCCCCGTGCAACAGCATCAGTCCATCCCCAACCCGTACGCTCC
TCCGACGCCTTCGACCGGAACGTCTCCATCGACTGGTGGGGATTTGCAGG
TATGTGTGGTGTGGGCTTTTCCAAGTGAGCCTGAGAATGGTGTGCTGGTA
GAGCGTAGGGTCGAAGGTTTTGCAATGATGAACGTGATTGACGAGAGTGT
AGGAGACGAAACTTGGCTTGCAGACTCTGACGCCACGAGAAGCGTTGTTG
TGCCAACCCCCGTCTCTGGTTTCCCGCCCGCTGCCAGCAGCGTAGTACAT
TCTGGCGACCCCACCGCTCACAGGTATATTTTTCATGCCCCCGTGTCGAA
TTCTCCGCCCGCTGATGCCGGCGTACTACCCTCTCCCGTGTCCGGTTTCC
CGCCCGCTACGAGTAGCGTCGTTCCTCCGGCAAATGTATGCCCCCTCCCC
CGCTGACAGGAGTTGTGGCTTCTTCTTCCGCTCCTCAAGTGCCGCATGGA
ATGGAGTTGGTGGCTGTTCCCGGGCTGCCCTCGCCCGACGTCTCCGTTTT
TCAGGAGAGTATTGACGATGATGACCGTAGGTGCATTTCGTACACAGAGC
AGGGAGATTACAAGTGGGCTGTGTACCTCTTGGAAACGAAGAGAAGAATC
AGAAGACCCTCATGAATTTTTAGACTTGATGTTATAGTCTGGGTTTGCGA
ATGTCTTCGATGATGTTCCCTTTGCCGTCCCCGTCATGGCCCCGGGCAAG
CGACCTTTTTCGGTGAGGAAACACACCACCATTGTTGACATCAATCTTCT
CCACGTGTCGTGTTCCCATGCGGATGAGGTTTTGTTGCGTGAGCTTTCAA
AGCAGCACGGCCTCCGCCTGACAGGTGTTCGGCAGCCTTGTGGTGGTTGC
CTGGAGGCGAAGGGGAAGAAGGCGGGCGTGCCCCATACAATGGGCGCGCG
CGGGCAGGCCGCACGATCTTTGGCACATCGATCTGTGTGGGCCCATGACG
GCGTCGCTGGGGGGGTCGTTTTTCATGATCATTTTCGTGGACAGCTTCTC
GCGGTGGATGAAGCTGTACGGGATGAGGCGCAAGTCGGACACCCTCGCCT
TCGTCAAGAAGTTCCTCGCCGATATGAGTGGCACCGGTGTTCCTCGTTCT
TTCCGGATGGACAACAGGGGGGAGTTCTTAAGCCGCGACTTCATCGCCTT
CTGACTACAACCGCGGCATCCGCCGTACGTACACGGCGCTGGACACCCCG
CAACAGAATAGTCCAGCGGAGAGCGCGATCTGGCGCGTGAACAAGGCCGG
CCACGCCGCTCGTCTGGAGGCATGCCGCCTGTTCCCCAAGTTCGACTTTA
CCCGCATCCCCGGTTACGGGCGCGATGGCGAGCGCCTTTGGCTAGAGTCC
TGTCACTGGGCAGCCGGCGGCTTCAACCGTTCCCCGACCAAGGCAAACGT
CGGGTACAAGTCGCCGCACGAGCTTTTCATCGGTCGCCCGCCCCCGCTCC
AAATCGTCCCGTTCTTGCAGCCGGGGTACATGCTTGTGACGCGTGCGCGG
AAGATGGATCCCCAGGCAGTGCTGTGCTGCTACCTCAACAACGGCGACAA
CCACCACGACTCGGCGTTCAAGGTCCTGGAGTTTGCGACGGGGCGCGTAT
GCATGACGAACAACGTTGTGTGGGTCTCCAACCGCGCGCCATTGCTGACC
CCGCCGCTGGAGCTGCCGGCGCCGGCGGGCGAGGGGAGGAATTCAGATGT
CGCCGCCGCACCGACGTTTCTAGTTGAGTACATTGCGCCGCCTCTCTTAC
CCCATAACTGTTCGCCCGAACTCCCACTTCACCCGCTGCCATACCCTTAC
AGGCGCCGCCGGCAACTTCCACACCACCATCGCCGGCGCCGCCGTCTACC
GCAGCCACGCCACCGTTCACCACCGCCGCTGCACCGTCAGTAA back to topCoding sequence (CDS) from alignment at chr_00:4429762..4438204+ >Ec-00_003900.1 ID=Ec-00_003900.1|Name=Ec-00_003900.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=264bp|location=Sequence derived from alignment at chr_00:4429762..4438204+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGATGGGGGCCGTCCGCACGGAGAAAGAGGACAGCCTGCAGCAGACATT TGGCATAGAAACAGATCTCCCAATCACTGGCATGTGCGACAATGTTGCTC GTGTGTTGGAGAGACCCCGAGACATCGAAATCGAGGCTCCACCTGAAAGC TTATCGGGCTGGTTTACGACCTGGCGCCGCCGGCAACTTCCACACCACCA TCGCCGGCGCCGCCGTCTACCGCAGCCACGCCACCGTTCACCACCGCCGC TGCACCGTCAGTAA back to top
Synonyms
The feature 'Ec-00_003900.1' has the following synonyms
Synonym |
Esi284_0050 |
Esi_284_0050 |
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