Ec-00_003860.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003860.1
Unique NameEc-00_003860.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length406
Homology
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: D7G2D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D5_ECTSI)

HSP 1 Score: 546 bits (1406), Expect = 7.550e-192
Identity = 392/409 (95.84%), Postives = 397/409 (97.07%), Query Frame = 1 
Query:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGR----SATKTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFPGDPGFRSCWCTTLRFSNPVAAW 1215
            MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKG+GRPRSATRKKK LHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGG+RRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTS R       +TGIGGVSTINMEMSG+NLFDALDTALVPKAAK ALLGLLLQLISPDVANMLGGESSKKTVG  EKTARGVAANVMSVYAYGFVGPARM+FSGGGPTNALTNPFLALGSHAWPGARQNLNTFPGDPGFRSCWCTTLRFSNPVAAW
Sbjct:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGEGRPRSATRKKKALHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGVRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSERHHREECHETGIGGVSTINMEMSGRNLFDALDTALVPKAAKTALLGLLLQLISPDVANMLGGESSKKTVGSDEKTARGVAANVMSVYAYGFVGPARMKFSGGGPTNALTNPFLALGSHAWPGARQNLNTFPGDPGFRSCWCTTLRFSNPVAAW 409
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: D7FUZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ7_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 1.090e-123
Identity = 310/315 (98.41%), Postives = 312/315 (99.05%), Query Frame = 1 
Query:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGRSATKTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGE 945
            MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGRSATKTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDV++  G E
Sbjct:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGRSATKTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVSSRPGRE 315
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: A0A6H5K0W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W4_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 2.260e-92
Identity = 193/199 (96.98%), Postives = 195/199 (97.99%), Query Frame = 1 
Query:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGAS 597
            MGGSEVNLNHHQTRGRT SSRKPSQKTPAA+SKGKGRPRSATRKKK LHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLR SNIAPMRT LDVRVPRSAIGGGG+RRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGAS
Sbjct:    1 MGGSEVNLNHHQTRGRTTSSRKPSQKTPAARSKGKGRPRSATRKKKALHTTCPSTATYEEPPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDSSYTLDPDEIGSDDEESQNLLRPSNIAPMRTILDVRVPRSAIGGGGVRRSDFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGAS 199
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 2.140e-66
Identity = 118/123 (95.93%), Postives = 119/123 (96.75%), Query Frame = 1 
Query:  781 KTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP 1149
            +TGIG  STINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGV A VMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP
Sbjct:  147 ETGIGRESTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVTAKVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP 269
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: A0A6H5JWT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT7_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 3.510e-66
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 1 
Query:  781 KTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKT-VGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP 1149
            +TGIG  STINMEMSGQNLFD LDTALVPKAAKAALLGLLLQLISPDVA MLGGESSKKT VGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPT+ALTNPFLALGSHAWPGARQNLNTFP
Sbjct:   82 ETGIGRESTINMEMSGQNLFDTLDTALVPKAAKAALLGLLLQLISPDVATMLGGESSKKTTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTSALTNPFLALGSHAWPGARQNLNTFP 205
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: D8LH35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH35_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.650e-63
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 1 
Query:  814 MEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP 1149
            MEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALG HAWP ARQNLNTFP
Sbjct:    1 MEMSGQNLFDALDTALVPKAAKAALLGLLLQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGPHAWPRARQNLNTFP 112
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.820e-38
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1 
Query:  925 ANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNALTNPFLALGSHAWPGARQNLNTFP 1149
            ANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPT+ALTNPFLALGSHAWPGARQNLNTFP
Sbjct:   45 ANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTSALTNPFLALGSHAWPGARQNLNTFP 119
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: A0A6H5KNE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE2_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.610e-25
Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = 1 
Query:  925 ANMLGGESSKKT-VGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPTNA-LTNPFLALG 1104
            ANMLGGESSKKT VGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGP NA LTNPFLALG
Sbjct:   25 ANMLGGESSKKTAVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPANAPLTNPFLALG 86
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: D8LH36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH36_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.200e-24
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 1 
Query:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHTTCPSTAT 171
            MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKK LHTTCPSTA+
Sbjct:    1 MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKALHTTCPSTAS 57
[Close]
BLAST of Ec-00_003860.1 vs. uniprot
Match: A0A6H5KF69_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF69_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.610e-20
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:  931 MLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPT 1071
            MLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPT
Sbjct:    1 MLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQFSGGGPT 47
The following BLAST results are available for this feature:
BLAST of Ec-00_003860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G2D5_ECTSI7.550e-19295.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUZ7_ECTSI1.090e-12398.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0W4_9PHAE2.260e-9296.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5R4_9PHAE2.140e-6695.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT7_9PHAE3.510e-6694.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH35_ECTSI1.650e-6398.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR20_9PHAE1.820e-3898.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNE2_9PHAE2.610e-2595.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH36_ECTSI1.200e-2496.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF69_9PHAE1.610e-20100.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4341204..4345514 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1218
Hectar predicted targeting categoryother localisation
Gene idEc-00_003860.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003860Ec-00_003860Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4341204..4345514 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003860.1Ec-00_003860.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4341204..4345514 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003860.1.5Ec-00_003860.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4341204..4341497 -
Ec-00_003860.1.4Ec-00_003860.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4342134..4342291 -
Ec-00_003860.1.3Ec-00_003860.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4342506..4343106 -
Ec-00_003860.1.2Ec-00_003860.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4345090..4345239 -
Ec-00_003860.1.1Ec-00_003860.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4345500..4345514 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003860.1CDS:Ec-00_003860.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4341204..4341497 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003860.1 ID=Ec-00_003860.1|Name=Ec-00_003860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=406bp
MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHT
TCPSTATYEEPPQPEPEEEEPEEEEPDEEEPDEEEPDEEEPDEEEAEHSD
SSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRS
DFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASG
RPGAGASDGRGRASSVGGGGRQSGLLGGRGSGSASGGGPLGWPGAGSSEG
GGSTSGRSATKTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLL
LQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQ
FSGGGPTNALTNPFLALGSHAWPGARQNLNTFPGDPGFRSCWCTTLRFSN
PVAAW*
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spliced messenger RNA

>Ec-00_003860.1 ID=Ec-00_003860.1|Name=Ec-00_003860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1218bp|location=Sequence derived from alignment at chr_00:4341204..4345514- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGGCTCTGAGGTGAACCTCAACCACCACCAAACGCGCGGGAGGAC
TGCTTCGTCCAGGAAGCCATCCCAGAAGACGCCGGCCGCCAAGTCGAAGG
GAAAGGGGCGGCCCAGGTCGGCGACCCGCAAGAAGAAGGTTCTACACACG
ACGTGTCCATCCACGGCCACGTATGAAGAACCACCCCAGCCGGAGCCCGA
AGAGGAGGAGCCCGAAGAAGAGGAACCCGACGAGGAGGAGCCCGACGAGG
AGGAGCCCGACGAGGAGGAGCCCGACGAGGAGGAGGCCGAACACTCTGAC
TCATCGTACACCCTGGACCCGGACGAGATCGGCAGTGACGACGAGGAGAG
CCAGAATCTTCTCCGGTCGTCCAACATCGCGCCCATGCGCACAACCCTTG
ACGTTCGCGTCCCGCGCTCGGCGATCGGCGGAGGAGGTATCCGCCGGTCC
GATTTTGCTCGCCGCAATTCCACCGGTGGCCCTGGCCGCGGAGCCTCGTC
CGCACGCGGCCGCCCATCATCCGTCGGCGGCCGCACTGGTCAACCCAGTC
TTCTAGCCGGCCGCGGACACAGCAGGGCCTCGGGCGGTGGCGCATCCGGC
AGGCCTGGCGCTGGTGCTTCGGACGGTCGCGGCCGCGCGTCATCCGTGGG
CGGCGGCGGTCGTCAATCCGGTCTACTCGGCGGCCGCGGCTCTGGCAGTG
CCTCTGGCGGTGGCCCCTTGGGGTGGCCTGGCGCTGGTTCTTCGGAAGGT
GGCGGGTCTACCAGTGGGAGGAGTGCCACGAAGACGGGCATTGGCGGGGT
ATCAACCATCAACATGGAGATGTCCGGACAAAACCTCTTCGACGCGCTTG
ACACTGCGCTGGTGCCCAAGGCGGCGAAGGCCGCGCTGTTGGGCCTTTTG
CTGCAGCTCATCAGCCCCGACGTGGCCAACATGCTCGGCGGCGAGTCCTC
CAAGAAGACAGTGGGCCCCGGCGAGAAGACTGCCCGCGGGGTCGCTGCGA
ACGTCATGAGTGTTTACGCCTATGGGTTCGTCGGCCCCGCCAGGATGCAA
TTTTCCGGCGGGGGGCCCACCAACGCTCTGACAAACCCTTTCCTCGCGTT
GGGTTCTCACGCGTGGCCGGGAGCGAGGCAAAACCTGAACACCTTCCCCG
GTGATCCTGGTTTCCGTAGTTGTTGGTGTACTACCCTGAGGTTCAGCAAT
CCTGTCGCTGCATGGTAA
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protein sequence of Ec-00_003860.1

>Ec-00_003860.1 ID=Ec-00_003860.1|Name=Ec-00_003860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=406bp
MGGSEVNLNHHQTRGRTASSRKPSQKTPAAKSKGKGRPRSATRKKKVLHT
TCPSTATYEEPPQPEPEEEEPEEEEPDEEEPDEEEPDEEEPDEEEAEHSD
SSYTLDPDEIGSDDEESQNLLRSSNIAPMRTTLDVRVPRSAIGGGGIRRS
DFARRNSTGGPGRGASSARGRPSSVGGRTGQPSLLAGRGHSRASGGGASG
RPGAGASDGRGRASSVGGGGRQSGLLGGRGSGSASGGGPLGWPGAGSSEG
GGSTSGRSATKTGIGGVSTINMEMSGQNLFDALDTALVPKAAKAALLGLL
LQLISPDVANMLGGESSKKTVGPGEKTARGVAANVMSVYAYGFVGPARMQ
FSGGGPTNALTNPFLALGSHAWPGARQNLNTFPGDPGFRSCWCTTLRFSN
PVAAW*
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mRNA from alignment at chr_00:4341204..4345514-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003860.1 ID=Ec-00_003860.1|Name=Ec-00_003860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4311bp|location=Sequence derived from alignment at chr_00:4341204..4345514- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGTGGCTCTGAGGTGAGGTGTCAGATTGCCGAGTATTTCGATTGGGC
GGTTAACCTGTTGAAGTCACGCGTCTGCGCTCTCCTCTCCTATTTTTTGA
TTTTTTCACGCTCATCGCACATCACCGTCACCATCACGCCCGCCCCACAC
TGTCACAACCCATCTACCCTCATCTGCTCCCCCTCTCCTGTGTACGGCAA
CCCAACCTATCCCCATCTGCTGCGATGCCTCTCCGCGCTGTCCACCGCAC
GACCTCCGTAACTCCACTCGGAGAGGTGAACCTCAACCACCACCAAACGC
GCGGGAGGACTGCTTCGTCCAGGAAGCCATCCCAGAAGACGCCGGCCGCC
AAGTCGAAGGGAAAGGGGCGGCCCAGGTCGGCGACCCGCAAGAAGAAGGT
TCTACACACGACGTGTCCATCCACGGTAAGCATGTAGGTTCTTTGCTTGC
CTTCTTTTGTGCTTCCTTCCAATCTAAACAACTTTCCCGAACAAAGCGTG
TGTTGTTTAAATTCGACATGATTTACGTCTGTACGAGAACATGACCGTAA
CATGGCCGTACGCATCTCGATAACCGCCTACATGGGCGTGTCGATTTTTG
ACGTACAGGTTGCAGCGAGTACGGCAGCCAACAAACGGTAGTGGGCATGC
GTTGCTAAATTGATATCCATGCGGTGGAGCCCATAGATCGTCCATACAGC
AGCATTCCCAATACGCTAGAGGCACGTGGATACAACTATTTATGTACAAG
TACGGAGTGTTTCCTTCCCGGCGTTCGCCCACGCCGGCCTCCGTTGAGGG
TATGGCTGTCCGGATCCTTTGTAGAGGGCGAGAGTTACAAAGGGTGTGGG
CGTTGTTGTGGGTGTGCCAAATGTGAGGTACTGTAGTTGTGTTATATATG
GTGAGCCTACCCCTTTTCGGTCGAAGAGCCCCTGTTGTGAACATGGTGTG
TCCCACAATACACGAACAATGGGTAAGGGGTCTAGCATATCTTGCTGTGG
GCGCCATCCGCACGTTGATCGATATGTCGTTGACCCAGTAGAGAACTACA
GGGGATGTATTGTAAAATGTAGGTTTACCTGTACAGATGTTTTTGTACTT
AGCACCAGCTGGCATCACTGACATAAATCATCAGTGTATAGACTAAAAAA
GACTCGAAATAATTTAAGTACCCAGCCGGTTTTCCTCCGCTCACTGAAAA
GACTCCACCACATCCCGTTCGACTGTGGGTATATCTCGAACGGATAGTCT
TTATGTGCGTGTATTTATTTCTCCTTAATCGATATAGATTTATGGCGGGG
GGAGGGGGGGGGGGGGGCGTACTCATTTGTTGCTTGCCGTAGTCATTTGA
CCATTGACCACGCGTCCCTTTCTCCTCCCAGTGCTATTTTTTTAAAAGTC
ACGCGTACAAACGTCAGCACCTTGAGCAACATGTTACTTGCATGACCATA
CAATCATTTTCCTAGCCTACATCCCTTTGCAATTGGCAATGGAGGCCAGC
AGCAGTCGAAGGTAGCCACACGAGTGTTGATTGGAGCAGCAAACATAGGG
AGGGGTGCGGTGCTGCAATTACGTCCGCGCTTGCTTTAATGTAGCTAGGT
CCCTCCAACCCCTGCTGATCGACTTCGCCGTCTATTGTTTCCAACGGGAG
AACAGAAAGTTTCTTGCGTTCACGTGTGCAGTCCTTCCGTACGTCGCCAC
CACAAACTATAGCCGCGCTTGGTCATGTGTGCAGAAATGTAATGGGATGC
TTGGTTCTGTTGTACGACGTCCGTCGAGTCGCAGCGAACGACAAAATAGT
ACCCTTCTCTTCCTCTCAGCGTAAGGGCAGCCACACCACCCACACCACAC
AAGCAGCGAACGTAAACACCCGGTAGTTTAGTAAAATTGGTGAACTGCGT
GCGTACCGCCCCAGCATGCCACCCTCTGTTGGCGTTGCGCGATGGATAGG
TTCTGGCGATCGCCATCAAAGCTGCTCTTATTTTTCCACTGTTGCTGCGC
CGCTGCGCCGTGATCTGGAGGCAGCGGCGGTATCAGCAGCCAACGGCGCG
GACATGTTGCCTCCATGCCCCACAAGCCTCTTCTACTCTTGTGTGTGCTC
TGTGTACTGCTGAACCGGCCAGTGATATGTGTGCCTGCGGTACCCTTCTT
CGAATATTTTGCCCCAAAACGATGACAACCGTATACAACTAAATGCAGCC
AAACACCGACCTCGACCTATCAGGAAACCACCGCCTCTCCCGACTCTTGA
CTACCCTAACCCATGTTTTTTAAGTGGCAAATTAGAACGCAGCGAAGAAA
AGTAGACCCGGACCTGTCAAGTTTCCCGTATCCTTCTCCGTACAAAGGCT
TTCGAATATCCAAACCTACATGCGCCCTATCCTTTTCGCTCGCATCCGGT
CATGACAGGCCACGTATGAAGAACCACCCCAGCCGGAGCCCGAAGAGGAG
GAGCCCGAAGAAGAGGAACCCGACGAGGAGGAGCCCGACGAGGAGGAGCC
CGACGAGGAGGAGCCCGACGAGGAGGAGGCCGAACACTCTGACTCATCGT
ACACCCTGGACCCGGACGAGATCGGCAGTGACGACGAGGAGAGCCAGAAT
CTTCTCCGGTCGTCCAACATCGCGCCCATGCGCACAACCCTTGACGTTCG
CGTCCCGCGCTCGGCGATCGGCGGAGGAGGTATCCGCCGGTCCGATTTTG
CTCGCCGCAATTCCACCGGTGGCCCTGGCCGCGGAGCCTCGTCCGCACGC
GGCCGCCCATCATCCGTCGGCGGCCGCACTGGTCAACCCAGTCTTCTAGC
CGGCCGCGGACACAGCAGGGCCTCGGGCGGTGGCGCATCCGGCAGGCCTG
GCGCTGGTGCTTCGGACGGTCGCGGCCGCGCGTCATCCGTGGGCGGCGGC
GGTCGTCAATCCGGTCTACTCGGCGGCCGCGGCTCTGGCAGTGCCTCTGG
CGGTGGCCCCTTGGGGTGGCCTGGCGCTGGTTCTTCGGAAGGTGGCGGGT
CTACCAGTGGTGTGTCATCGGATCAGAGCGCAGCAAGACACCAGGCTAAA
TCCAGACGTGTGTCGACTGGCATCAACGGCAACGAGAGTTCAGCTTCTGG
TACATCACACAGTGGCGGTACCAGGTCCGGTGGTCCCACGGGCGGTGGTT
CCACTTCGACCGGGGCGAGCACCACGACCTTCCGCGCCCTGGGTAAGCGC
TCTGTTCAAGAGCGCCACCACAGGGAGGAGTGCCACGAAGACGGGCATTG
GCGGGGTATCAACCATCAACATGGAGATGTCCGGACAAAACCTCTTCGAC
GCGCTTGACACTGCGCTGGTGCCCAAGGCGGCGAAGGCCGCGCTGTTGGG
CCTTTTGCTGCAGCTCATCAGCCCCGACGTGGTGAGTGGTTTCTTTTATC
ATGAGATGAAGGGTAGTAAAACGTATTGCCTTTTTCTTGTTTTTTTTTCT
TGTTCGAGTGGAAGTGGAGCATGCACGCGCTGGTGGACTGATCTTAGAAT
CACCACCCATTGGTATTTTTGTTTGTGTATCTGTGGGGAATGCTTGGACT
TCGGCCGCGAGCCTAGTTGCAGTGGTCTTGGATGAGGTAACTGTTTTATC
GTTGCGTAGCCTTGGCATCGGGTTGAGAGCAGGAGGCATGGGCTCTGCGT
CTTTATTTCTGAGTGAGGTTCTTCCTGTTTTCTCTTCGTTTTTTTTTGCC
GATTTCAACCCCCGATTTGTCATTTCGTCATTTTATCTCGCATTTGATGT
TCTCTTCGCTGATTAATAGGTGTGTACGGCTTCTGGGGCTGGTTGCCCTG
TGCCCACGGGAGGCGTCCGCGTTACTCGCACCAGTCCATATGATATTTTA
CGAAACCTTGCCACCCAAACTTCACGCGCAAACACTTGCTGCCTGTACGC
GATGACCACATTTTCTATCGTCCATGTTCCTGTGTGTTCTCGCCCATGTA
CTACATAGTGTGCGCGTCGCCTTACTACATCAGGAGACATTCGCTTGCTG
TCTTTGCTCGAACACAGGCCAACATGCTCGGCGGCGAGTCCTCCAAGAAG
ACAGTGGGCCCCGGCGAGAAGACTGCCCGCGGGGTCGCTGCGAACGTCAT
GAGTGTTTACGCCTATGGGTTCGTCGGCCCCGCCAGGATGCAATTTTCCG
GCGGGGGGCCCACCAACGCTCTGACAAACCCTTTCCTCGCGTTGGGTTCT
CACGCGTGGCCGGGAGCGAGGCAAAACCTGAACACCTTCCCCGGTGATCC
TGGTTTCCGTAGTTGTTGGTGTACTACCCTGAGGTTCAGCAATCCTGTCG
CTGCATGGTAA
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Coding sequence (CDS) from alignment at chr_00:4341204..4345514-

>Ec-00_003860.1 ID=Ec-00_003860.1|Name=Ec-00_003860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1218bp|location=Sequence derived from alignment at chr_00:4341204..4345514- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGTGGCTCTGAGGTGAACCTCAACCACCACCAAACGCGCGGGAGGAC
TGCTTCGTCCAGGAAGCCATCCCAGAAGACGCCGGCCGCCAAGTCGAAGG
GAAAGGGGCGGCCCAGGTCGGCGACCCGCAAGAAGAAGGTTCTACACACG
ACGTGTCCATCCACGGCCACGTATGAAGAACCACCCCAGCCGGAGCCCGA
AGAGGAGGAGCCCGAAGAAGAGGAACCCGACGAGGAGGAGCCCGACGAGG
AGGAGCCCGACGAGGAGGAGCCCGACGAGGAGGAGGCCGAACACTCTGAC
TCATCGTACACCCTGGACCCGGACGAGATCGGCAGTGACGACGAGGAGAG
CCAGAATCTTCTCCGGTCGTCCAACATCGCGCCCATGCGCACAACCCTTG
ACGTTCGCGTCCCGCGCTCGGCGATCGGCGGAGGAGGTATCCGCCGGTCC
GATTTTGCTCGCCGCAATTCCACCGGTGGCCCTGGCCGCGGAGCCTCGTC
CGCACGCGGCCGCCCATCATCCGTCGGCGGCCGCACTGGTCAACCCAGTC
TTCTAGCCGGCCGCGGACACAGCAGGGCCTCGGGCGGTGGCGCATCCGGC
AGGCCTGGCGCTGGTGCTTCGGACGGTCGCGGCCGCGCGTCATCCGTGGG
CGGCGGCGGTCGTCAATCCGGTCTACTCGGCGGCCGCGGCTCTGGCAGTG
CCTCTGGCGGTGGCCCCTTGGGGTGGCCTGGCGCTGGTTCTTCGGAAGGT
GGCGGGTCTACCAGTGGGAGGAGTGCCACGAAGACGGGCATTGGCGGGGT
ATCAACCATCAACATGGAGATGTCCGGACAAAACCTCTTCGACGCGCTTG
ACACTGCGCTGGTGCCCAAGGCGGCGAAGGCCGCGCTGTTGGGCCTTTTG
CTGCAGCTCATCAGCCCCGACGTGGCCAACATGCTCGGCGGCGAGTCCTC
CAAGAAGACAGTGGGCCCCGGCGAGAAGACTGCCCGCGGGGTCGCTGCGA
ACGTCATGAGTGTTTACGCCTATGGGTTCGTCGGCCCCGCCAGGATGCAA
TTTTCCGGCGGGGGGCCCACCAACGCTCTGACAAACCCTTTCCTCGCGTT
GGGTTCTCACGCGTGGCCGGGAGCGAGGCAAAACCTGAACACCTTCCCCG
GTGATCCTGGTTTCCGTAGTTGTTGGTGTACTACCCTGAGGTTCAGCAAT
CCTGTCGCTGCATGGTAA
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