Ec-00_003820.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_003820.2
Unique Name	Ec-00_003820.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	380

Homology

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BLAST of Ec-00_003820.2 vs. uniprot
Match: D8LJH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH3_ECTSI)

HSP 1 Score: 722 bits (1863), Expect = 4.140e-253
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 3

Query:  252 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSAA 1577
            DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSAA
Sbjct:  194 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSAA 635

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BLAST of Ec-00_003820.2 vs. uniprot
Match: D8LSE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE5_ECTSI)

HSP 1 Score: 600 bits (1546), Expect = 7.250e-208
Identity = 386/441 (87.53%), Postives = 386/441 (87.53%), Query Frame = 3

Query:  252 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 1574
            DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAA VSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSG NLSAYAYANGVALGKELGGMFKEVPSV                                               GDAG  XXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXX  SAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA
Sbjct:   61 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGPNLSAYAYANGVALGKELGGMFKEVPSV-----------------------------------------------GDAGXXXXXXXXXXXXXXXXXGRXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXVNSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 454

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BLAST of Ec-00_003820.2 vs. uniprot
Match: D7FVI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI8_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 1.780e-144
Identity = 243/271 (89.67%), Postives = 246/271 (90.77%), Query Frame = 3

Query:  252 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALP 1064
            DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAA VSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSG NLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMK     +     RS R E++ R        P P LP
Sbjct:  194 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGPNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKFTPSNKSRW--RSGRYETSQRAGCSRELSPGPPLP 462

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BLAST of Ec-00_003820.2 vs. uniprot
Match: A0A6H5K6I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I6_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 1.910e-142
Identity = 276/426 (64.79%), Postives = 291/426 (68.31%), Query Frame = 3

Query:  318 AARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVA------SIQRLMESMKLHAKQQIE-VEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 1574
            AARRLFEELVADPTKANLTYDTGSGELVDPSIPTS+ A VSMVS TSVPHFAELLRDQNVHTVVRITP+STASECGHL ALGP GFFLCTCLRQLVYGLLCP+AIKA                     ETPWTMAA AAKPAKLSTGAAGL        QM PVD +PIVSSHSG NLSAYAYANGVALGKELGGMFKEV S        +  R+ E+++    +  E V  R + +      F    P P     +G  G                                       XR      XXXXXXXXXX   SA FAT +PS TTGVRRASHPPAGS TT AAPIGFQA PVNGAHTSEGLALPFR+LDNVDVSRRGGGQASPPFQTTAHLVQL RLQPP RKKQTGPSKRHKSSSA
Sbjct:  341 AARRLFEELVADPTKANLTYDTGSGELVDPSIPTSDVAGVSMVSHTSVPHFAELLRDQNVHTVVRITPISTASECGHLAALGPHGFFLCTCLRQLVYGLLCPNAIKAF--------------------ETPWTMAATAAKPAKLSTGAAGLTGPAGPPRQMLPVDPNPIVSSHSGPNLSAYAYANGVALGKELGGMFKEVSSGIVCGEHPTFDRVHEALRQATNRGGEAVVTRRVNEPGVHGNFPPAHPCPAAGSRRGSGGG-----------------------------------GNGXRXXXXXXXXXXXXXXXXGGNSASFATRTPSVTTGVRRASHPPAGSGTTGAAPIGFQATPVNGAHTSEGLALPFRSLDNVDVSRRGGGQASPPFQTTAHLVQLERLQPPSRKKQTGPSKRHKSSSA 711

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BLAST of Ec-00_003820.2 vs. uniprot
Match: D7G252_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G252_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 4.770e-134
Identity = 278/286 (97.20%), Postives = 278/286 (97.20%), Query Frame = 3

Query:  717 MAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 1574
            MAALAAKPAKLSTGAAGL XXXXXXXQMPPVDTSPIVSSHSG NLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDP XXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXX  SAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA
Sbjct:    1 MAALAAKPAKLSTGAAGLTXXXXXXXQMPPVDTSPIVSSHSGPNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPGXXXXXXXXXXXXXXGRAXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXVNSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 286

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BLAST of Ec-00_003820.2 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 1.160e-126
Identity = 290/441 (65.76%), Postives = 290/441 (65.76%), Query Frame = 3

Query:  252 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 1574
            DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAA VSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK                                                                                                                                                GDAGDP  XXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXX  SAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA
Sbjct:  355 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK------------------------------------------------------------------------------------------------------------------------------------------------GDAGDPGRXXXXXXXXXXXXXXRAXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXVNSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 651

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BLAST of Ec-00_003820.2 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 7.980e-112
Identity = 242/456 (53.07%), Postives = 290/456 (63.60%), Query Frame = 3

Query:  201 LRPERSEVRAVQPARHGDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSP--IVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHK 1562
            L  E+S   A++     DTEAQI+ AL+Y+   VV D +AARRL ++LVADP +A L YDT SGELVDPS  T +A+ ++MVSRTSVPHFA+LLR QNV  VVRI+ ++  SE GHLVA+G DGFFLCTCLRQLVYGLLCPH IKALW QR ++FNGA+I P WRDS TPWTM ALAA+PA+LSTGAAG         Q+PP+  +P  I S  SG  LSAY YANG++LGKELG +FKEV SVA I R+++++   A+QQ+EVEKRSLR ES  RVFTGT  +PT    +G A                                         R   G  XXXXXXXXXXXXX  G ATG+ S  +GV    +P A       AP   Q  P NGAHT +GL  P R+L+NVD    GGGQA  P Q  AHL+ +  L PP  +KQTG SKRHK
Sbjct:  597 LAHEKSSTHAME-----DTEAQIVAALTYQDRTVVSDADAARRLLDDLVADPAQAKLVYDTRSGELVDPSHETPDASGITMVSRTSVPHFADLLRGQNVDAVVRISKITPPSEFGHLVAVGSDGFFLCTCLRQLVYGLLCPHVIKALWSQRITRFNGASIGPWWRDSSTPWTMEALAARPARLSTGAAGAHG------QVPPLVGNPDAIGSLDSGPKLSAYGYANGLSLGKELGALFKEVGSVAGIHRVVDTVFNFARQQVEVEKRSLRQESRGRVFTGTFSQPTTVTGRGGASS-----------------------------RGGRGSTGTGRGDRGXXXXXXXXXXXXXXXXVGLATGTSSPVSGVPTVQNPVAAGAVP--APSVLQT-PANGAHTFQGLGTPLRSLNNVDFG--GGGQARSPPQEPAHLMHMEHLHPPLAQKQTGQSKRHK 1007

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BLAST of Ec-00_003820.2 vs. uniprot
Match: A0A6H5JRX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRX3_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 7.920e-93
Identity = 226/458 (49.34%), Postives = 276/458 (60.26%), Query Frame = 3

Query:  201 LRPERSEVRAVQPARHGDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGGRGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 1574
            ++ ER   RA++     DTEAQ++ A+ Y A  +VR E  A RL +EL A+P KA L YDT SGEL+DPS PT+EA  VS VSRTSVPHFA+LLRDQNV+ VVR++ ++  SE GHLVALGPDGFFLCTCLRQLVYGLLCPH +KALW +    F GATISPRW         AA A  PA +               Q P  D +  VS  +G N+ +YAY NGVALGKELGGMFKE+ ++A I R ME++KL A+ Q+++EKRS  + ST+RVF G   +P   LP GDAG           XXXXXXXXXXXXXXXXXXXXXXXXXX    R+ G G              AG ++             HPPA         +G    PV+GAH  +G  +P  +L NV V    G Q SP       L+ L ++Q PP  +Q GP KRHKSS+A
Sbjct:   87 VKNERCSTRAIE-----DTEAQVVAAIGYNATCLVRGEGEAWRLLDELAANPAKAKLCYDTSSGELIDPSQPTTEAPGVSTVSRTSVPHFADLLRDQNVNAVVRVSMIAPPSEFGHLVALGPDGFFLCTCLRQLVYGLLCPHGLKALWAEGVVSFKGATISPRWP--------AASAGLPAGVG--------------QPPRADPNSTVS-RTGPNVPSYAYTNGVALGKELGGMFKEINNLAGIHRAMETIKLFARAQVDLEKRSQDEHSTNRVFRGVFSQPAEDLPSGDAGGTGRGPGRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXATGVRTPGPG--------------AGDSS------------FHPPAA--------VGGAVPPVSGAHPLQGAGVPLGSLSNVAVPGGAGRQPSP-------LLALEQVQAPPVLRQKGPRKRHKSSAA 475

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BLAST of Ec-00_003820.2 vs. uniprot
Match: A0A6H5JGY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY2_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 1.140e-91
Identity = 216/463 (46.65%), Postives = 265/463 (57.24%), Query Frame = 3

Query:  201 LRPERSEVRAVQPARHGDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGG-----RGXXXXXXXXXXXXXSAGFATGSPSGTTGVRRASHPPAGSDTTSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTAHLVQLGRLQPPPRKKQTGPSKRHKSSSA 1574
            ++ ER    A++     DTEAQ++  L Y A  +VR E+ ARRL +EL ADP KA L YDT SG+ +DPS PT+EA  VSMVSRTSVPH A+LLRDQNV+ VVR++ ++  SE  HLVALGPDGFFLCTCLRQLVYGLLCPH ++ALW +    FNGA ISPRWR+SETPW MA LAAKPA LS  AA          Q P VD +  VS  SG N+ +Y YANGVALGK+LGGMFKE+ ++A I R ME++KL A+ Q++++KRS    ST+RVF G   +P   +P GDAG                                         RSGG      G  XXXXXXXXXXX                    PPA         +G     V+GAHT +G  +P  +L NV V   GG    P        + L + Q PP  +Q G SKRH+SS+A
Sbjct:  748 VKNERCSTHAIE-----DTEAQVVATLGYNATCLVRGEDEARRLLDELAADPAKAKLWYDTSSGDPMDPSQPTTEAPGVSMVSRTSVPHVADLLRDQNVNAVVRVSMITPLSEYSHLVALGPDGFFLCTCLRQLVYGLLCPHGLEALWAEGVVSFNGAIISPRWRESETPWLMAELAAKPASLSARAATSAGLPAGVGQPPRVDPNSTVS-RSGPNVPSYTYANGVALGKKLGGMFKEINNLAGIHRAMETIKLFARGQVDLDKRSQEKHSTNRVFRGVFSQPAEDVPSGDAGGTGRGPGRGG-------------------------------RSGGGERGATGMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAA--------VGGAVPLVSGAHTLQGAGMPLGSLSNVAVP--GGAGRQP--------LALDQEQAPPVLRQRGRSKRHESSAA 1155

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BLAST of Ec-00_003820.2 vs. uniprot
Match: D8LFR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR6_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.420e-75
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 3

Query:  252 DTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK 635
            DTE QILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAA VSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK
Sbjct:   61 DTETQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDTGSGELVDPSIPTSEAAGVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIK 188

The following BLAST results are available for this feature:

BLAST of Ec-00_003820.2 vs. uniprot

BLAST of Ec-00_003820.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJH3_ECTSI	4.140e-253	100.00	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D8LSE5_ECTSI	7.250e-208	87.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FVI8_ECTSI	1.780e-144	89.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K6I6_9PHAE	1.910e-142	64.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G252_ECTSI	4.770e-134	97.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G8C7_ECTSI	1.160e-126	65.76	Putative far-red impaired response protein n=1 Tax...	[more]
A0A6H5JXK5_9PHAE	7.980e-112	53.07	SWIM-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A6H5JRX3_9PHAE	7.920e-93	49.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JGY2_9PHAE	1.140e-91	46.65	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
D8LFR6_ECTSI	6.420e-75	98.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:4187997..4194503 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	73.6
Seed ortholog evalue	2.3e-10
Seed eggNOG ortholog	2880.D7FLF6
Length	2080
Hectar predicted targeting category	other localisation
Gene id	Ec-00_003820.2
EggNOG OGs	2CMGX@1,2QQB8@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_003820	Ec-00_003820	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 4187235..4194503 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003820.2	Ec-00_003820.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 4192868..4194007 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003820.2.1	Ec-00_003820.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4187997..4188043 +
Ec-00_003820.2.2	Ec-00_003820.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4188775..4188840 +
Ec-00_003820.2.3	Ec-00_003820.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4192169..4192310 +
Ec-00_003820.2.4	Ec-00_003820.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 4192679..4194503 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003820	5UTR:Ec-00_003820.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 4187997..4188043 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003820.2	CDS:Ec-00_003820.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 4192868..4194007 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003820	3UTR:Ec-00_003820.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 4194008..4194503 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:4187997..4194503+
coding sequence from alignment at chr_00:4187997..4194503+

mRNA sequence

>Ec-00_003820.2 ID=Ec-00_003820.2|Name=Ec-00_003820.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=380bp
MVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTC
LRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKP
AKLSTGAAGLTGPAGPTGQMPPVDTSPIVSSHSGLNLSAYAYANGVALGK
ELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTL
PRPTPALPQGDAGDPGRGGRGRGGKGSTGRGRAGEKGDPGSSSQGSGGGG
NGGRRSGGRGGGTGHGRAGGSVNSAGFATGSPSGTTGVRRASHPPAGSDT
TSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTA
HLVQLGRLQPPPRKKQTGPSKRHKSSSAA*

spliced messenger RNA

>Ec-00_003820.2 ID=Ec-00_003820.2|Name=Ec-00_003820.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2080bp|location=Sequence derived from alignment at chr_00:4187997..4194503+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AACGTGTCGCGGATCCGAGCGCTCGCCGCAACACAAAGTCACAGAAGGTG
GGTTGCGAGTTCCACTTGGGGCTGTGGTGGGGGGCCGACATGAATACACC
GCAAGTTGCAAAGACGAAACCTGGGAGGAACGGTCGCCCGAGTGGCTGTG
CAGGAACACTCGTATGTGGAAAGCTTCAGGACCAAGCACCTGCGAACGTT
CAACTTCGTCCTGAACGCAGTGAAGTACGAGCAGTGCAGCCAGCACGCCA
CGGAGGACACTGAAGCACAGATCCTCGGGGCTCTCAGTTACGAGGCGATA
CCTGTCGTGCGTGACGAAGAGGCGGCGCGGAGACTGTTCGAGGAGTTGGT
GGCAGACCCGACGAAGGCGAACCTCACGTACGACACCGGCTCCGGAGAGT
TGGTGGACCCTTCAATACCGACGTCCGAAGCCGCTTGTGTCTCCATGGTG
TCCCGCACATCCGTGCCTCACTTCGCGGAGTTACTTCGTGACCAGAACGT
CCACACGGTGGTGCGCATCACACCGATGTCTACGGCGTCCGAGTGCGGTC
ACCTCGTCGCCCTTGGACCGGACGGCTTCTTCCTCTGCACGTGCCTGCGG
CAGCTCGTCTACGGGCTACTTTGCCCGCACGCCATCAAGGCCTTGTGGTA
CCAGCGTGCCTCCCAATTCAACGGAGCAACCATTTCACCAAGGTGGCGTG
ACAGTGAGACGCCATGGACGATGGCAGCGCTGGCCGCTAAGCCTGCCAAG
CTATCGACCGGAGCTGCGGGGCTGACGGGACCTGCGGGGCCTACCGGACA
GATGCCGCCCGTCGACACCAGTCCGATCGTGTCGTCCCACTCCGGACTCA
ACTTGTCGGCCTACGCGTACGCCAACGGCGTCGCCTTAGGGAAGGAGCTG
GGTGGTATGTTCAAAGAGGTCCCGTCTGTGGCGAGCATCCAACGCTTGAT
GGAGTCCATGAAGCTTCACGCCAAGCAACAAATCGAGGTGGAGAAGCGGT
CGTTACGAGACGAGTCAACGAGCCGGGTGTTCACGGGAACTCTCCCCCGG
CCCACCCCTGCCCTGCCGCAGGGAGACGCCGGGGACCCTGGTCGGGGGGG
GCGCGGCCGGGGGGGAAAGGGGTCTACCGGAAGAGGACGGGCAGGGGAAA
AGGGTGACCCTGGAAGCAGCAGCCAGGGAAGCGGTGGCGGTGGAAACGGC
GGCCGGCGAAGCGGGGGCAGGGGCGGAGGGACAGGCCACGGGCGCGCAGG
GGGGAGCGTAAACTCTGCTGGTTTCGCTACGGGTTCGCCGAGCGGTACCA
CGGGGGTTCGCCGAGCGTCCCACCCTCCGGCAGGATCGGACACCACCAGC
GCCGCGCCTATTGGCTTCCAGGCGGCACCCGTCAACGGGGCGCACACGTC
CGAGGGCTTGGCGTTGCCGTTTCGTGCCCTGGACAACGTGGACGTTTCTC
GTCGCGGGGGGGGGCAGGCTTCGCCACCTTTCCAGACGACCGCCCATCTT
GTTCAGTTGGGGCGTCTGCAACCACCGCCCCGTAAGAAGCAAACGGGGCC
GAGCAAACGACACAAAAGTAGTAGTGCGGCGTAGTGGAGGAGACCATTTA
CCTGTAGGACACGTCAGGAAAATGTAAAGCGTGTTGCCGATGCCTTACTC
GGCGTTGCATTCGCTTTGTTACCGTTGGAGCGTGTTGGTTTGCGCGCGCG
TGTGGATGTGTGTTGCGTGTGTTGGGGGGTCTGCCAACAGCATCTGTTGT
GTCGGATTGGTATTATTTCCTTCGGTAGCCGGCCCGCCGCAGCAAGGAGA
AGGGGGATTCGCTTGGAAAACCATTGCCGGTTGGCAGGGGTGGAGGGGCA
AGAGTCTCTCGACCCCGCGGAGTCTTCGTTCTTCCCCGTGTCCGATATGT
TTTGAGTTTTTTTTTGCGCGTTGGATGAGAGTACCGCTGGTCCCTTTATC
ATGACCACTCATTGGAATTAAGTTGCAGCCTTGATTCGCCGTCGTGATGG
TGTATCTTCATTGCCCGTTGACATTTTATGCGGTTTCCCTAGAGCTCTCC
GGTTTTGAAAGTACTCGCGTGTTCATGATG

protein sequence of Ec-00_003820.2

>Ec-00_003820.2 ID=Ec-00_003820.2|Name=Ec-00_003820.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=380bp
MVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTC
LRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKP
AKLSTGAAGLTGPAGPTGQMPPVDTSPIVSSHSGLNLSAYAYANGVALGK
ELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTL
PRPTPALPQGDAGDPGRGGRGRGGKGSTGRGRAGEKGDPGSSSQGSGGGG
NGGRRSGGRGGGTGHGRAGGSVNSAGFATGSPSGTTGVRRASHPPAGSDT
TSAAPIGFQAAPVNGAHTSEGLALPFRALDNVDVSRRGGGQASPPFQTTA
HLVQLGRLQPPPRKKQTGPSKRHKSSSAA*

mRNA from alignment at chr_00:4187997..4194503+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_003820.2 ID=Ec-00_003820.2|Name=Ec-00_003820.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6507bp|location=Sequence derived from alignment at chr_00:4187997..4194503+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AACGTGTCGCGGATCCGAGCGCTCGCCGCAACACAAAGTCACAGAAGGTT
TGTCTGCCTGAAGTACGAACCGATGTGGAGCTCCCGATGTTGAGCTCTCG
CCACCGTTGTGTCTCGGCTCCTCTTTTTAGCGCGTCGGGTGACGAGTCAT
CTGACAAGTCAACGGAGGAGTCGCGATGGGAAATGGACATTGGGCGCGCT
TTGTTGTTGAACTTCATTTCTTTTTGGCGCCGATTGAACATGATCGCTGC
ATACATGGACTTTTCGGGACATCGTCCGCGGTTGAACGTTCTGAGCTGCT
GCGCTGTAGTCCCCCTCGCTCTGCAATATGAAGCGCTCGAAAACGCGAGC
GTCGACGCAAGGAGTAGTTGTGTGCCGGGTCAGGACCTTGTGTTGGTCGC
ACGGCGGCCGCACCTCTTCGCTGTGGTCTCCGTTGTGCGGGCGATGCTCC
AACGCGTTCTTCCGGCAAATTTGTTGGCTTTTCTGATGTTGCTTGCTTGC
TGGTTGCGCACCCTCTGCGCTGTAGTTGTCGAGGAAAGCACCGCAACAAG
GGACGTAGGTGAGTCCACCTCCCGTGTGTATGTGTGTGTGTGTGCGGTTT
GTCTTCGTCCACCTCCCGTGTGTATGTGTGTGTGTGTGCGGTTTGTCTTC
GTGCGTATGAAACGCATGGAACGCAAATGGCGTAACGCTAAATGGCCATC
GCTCTTCGCGCGGACACACTTATTTCTTCTGTACCCTCACAACACTGTCG
TGTTGTTTATACCCTGTCCGAATCCCAGGTGGGTTGCGAGTTCCACTTGG
GGCTGTGGTGGGGGGCCGACATGAATACACCGCAAGTTGCAAAGGTGAGT
TAAGTTGAGGGGAAGTACGTCGGTACAATGGATGGATCGCGTTGGATGTG
TTAATGTAGGCAGCCCAAAGCTAGACATTCTTAACAAATGATGTTCACGC
GGGTTCGAATCCCAGCTCTGACGCTTTGGACTCAGGAGGCACCCTTGATA
TATTTTGCCAGCACCGCATGGCGAGGGGTCCGTCCCCGGACATCACTGCC
GACTGCACCTTACCAAATCAACTGCGCGTAGCCTGAGGTATGACAGGAGC
GCACCCGCTTGTTTGAACATGGAGACCTTGCGATCATGTGCGTACTGTTG
ACACTGCTTCGCTTGCCTCCCGATACCGGATGCGCAGGGAAAGGTTTGCC
TCGCGCATCTTACCCCCGATCCAGATTCAGCCGGAATGGAGCACGAGCGC
CCACGACGCTACGAAAACGACGTGAGCGAGGAGGACATCGAGAAGGAATC
CGAACTCATCCGTCTGCTACACTTCAAAAATTTGCCAACGATAGAGATCC
ACAAGGCTTTCGAGGACATCGGAAAGAGGCTGGGGAGAGCCGGAAAGCAA
AAGGTGAGTGGGCGAGAGTGTAGTTTGCGGTAGTAAACGCTACCTAGACG
GCGCGACGGGGGGGGGAGGGGGAGTACTCATCGCCGTGCATGCCGCAGTC
GTTAGACCGGTGACATGGCATCCCTACAAAGCCGGGACGGAATCATGCCG
GCTTGTCACCGGACCAGTCTGTGACATCGCCAAGCGCGAAGCACCGTGAG
GTATTCGCCGAGTCGCATGGGGCGTGCCGCTACATCCTGCTGGGTGTGCG
GCGTGTTGGGCTAAGGATGACAGCTGCGAGTAACCCTGAATTTGTTTTCG
TGCTGCACTCTTCCAGAGACAGCAGTAAGGACAGTGTCAATACGTTGAGG
GTGCTCGACCAATTCAACAGAAAGTGGTGCCACCATCCCCTTTGCGCAGA
GTGAAGGTTGTCCACCCCGCACACCATGATGTACTCGACCACCATCATGT
TTGCCGCTAACAAACACCAAGGCGACAAAAAGTGGCAACCTTTTTGTCGA
GCTCACAAAGCCATCGGCGTGTTGCCGAGCGACGAAAACCCACGGGGGGA
ACGGGGGGTAGCCCAAAAGTGGGGTGATGACGAATTATGTAACCGGCGGC
ATTTTCGTTGAAACCATTCTTGTTTCGTCTGCATGCTTTCGTCCGAGTAC
ACCCTAACCGAGTTCACTGCCGGGTTGTCCATGTTTCCGTTAGGTGCGAA
GCATGAGGGATGCGTTCGACGCAGAACCTAAGGCCGACAACGGAGTGTTC
AACGACGCCCAGCTGTTCGCTTCGCACCTCCAGCAGAGCGAGGCTTTCAT
GAGGTTCAAGGCAGACGAGCAGGGCCGCATCACGTCCATCGCCTGGGCAT
ATCAGCAGCAGACGTACAACGCCGTACGATACCACTCCGTCATCGTCCAG
GACAACACGTTCAACACGAACATGTGAGTGTAGTGTTTGACGCTCTTTGT
TCAAGTCCCTTGGCACCCCAAGTTGTGGGGGCAATACTGTTGTCGAGAAA
AGTGTCGACGGTATCTTCTTTTCCACCATCTCACGCATGCCACGTCCCTT
CTCCACGATCTCATGCACGCCATGTCCATTTCTTGTGCTTGTTGTGCCAC
GCCTCCTCCAACCAGATACAAGTTCCATCTTGCATTGATAGTCGTGGTGG
ACAAGGAGAACCACAGCCAGATTGCGATGCAAGCTCTGCTGTCAGACGAG
CGGTCGGAATCCTTCGAGTTCGTCTTCGAGTCGTTCAAGCAGCTCTGCGA
AGGAGGAACCCCGGAGGTAAAACAAAGTATGACAAGGCAATACAGTATGC
ACTCGCCCATAAATGGCGCCAGTCAATGTTAGAATAAAGGAACTGAACGC
GATTTAGTTGAACACGACATGATCATGCGGTGAACTTCCTCCGGTCTACT
GTGCTCGAATGTTGAATAAGGTGGTCTTCACTGACTGTGACGCAGCCGCG
ATGTTGGCAATCGCGAAGGTCTATCCATCGGCCCTGAACAAGTTGTGCAT
CTGGCACACCATGGGGAACATCCGGGAGCATGGGGGGGGTCTTGAGAAGG
GTGTCCTGGGTCAGGTTCTTCAACTTTTCAAGGCAGCGGCGTACGCGCAA
ACGGAGGAGGTGAGCCATCTTGGTTGGACATTGAATCATTTTTTTCGTGG
GTGATGTTCCGCACGGATCTTCCACTTGCAGGTGTAGGCCGTGTTGTCCA
ACGCTTGAGAGAGCTGCGATCGTAGAAGCGCGGGAATCGTCGCCGCCGCG
TGCGGCTACACCCAACGGCCCGCTCTCCTTGTTTTGTCTATTTCATACGA
AAGGTCCTTGGCACCTTCTTTCTCCCGGTCCATTTTCTTTCATCCCGTCG
CGTGCTCCGTTACTTGTCACTCTCGCAGTATTTCCTGCAATGTAAAGGGG
CGCTCCTCGACCTCTTGCCCCCGGAGAGCAAGATGTACGAGTACATGGAG
AAGAACATCTTCGGCACAGGGTAAGCACCGACTAGAATGGCAGCCGATGC
TAAGTAGGCCACGGACGCGTGACGTCTTGCTCCTCCTCCGTCGACGATGC
CTTTCTCCTGTTTATTCTGTTTGAAGGTTCCGTCAGTTGGTGACGTCGTC
CGTCTCGTGCCCACTAAGTTTGAGCCGTCCCGTAACGTGTGACAGGCGGG
CTGGCAAATGGGCGTCGTACGTCCACCCTGGGCTGCACACTCTCGGCATT
GCCTCCACCCAGCGTGTTGAGTCGATGAATGCTGCGGTGAAGAAGCTGGT
GACCAGGAAGGGCGACATGGTCGACCTCGGCCGAGCGCTCCTAGGCAAGG
TTCAGGATGACATCAACAGGACCCAAAGGTGGGCGTCCGGTTGTGACATT
TGCGTGTACATATTTTGCGACACCAGCTGAGGCAACCCATGGTCCAGTGA
CCTCGACGCATTGCGTGGTTGAGTTCTGGCAACCTGTTCAGAAGGAAGGT
GGTAGCATTTGAAGGTGGTAGCATTTGAATTTTTGTGCGTGTCTCGTAGG
TCGCCTCTCGACAACAAAGAGCAATTGACCAACCACGCGGAAGCACGCCC
GTTGCATGTGGATGAGGTCAACTCAACGTTCGCGAGGTGGTATGTCGTCG
GTAGTGCGTATGCACGACGGACTCGAGGCTTCCCAGGCGGCCCACACCAG
AGATCCTTTGCAATGACGGGGACAATACATTAATAGTCGCCGGCATTTCT
ACATCATGTTGTGTTGTGGCGCGTTTGGTTGACAAGTTTTGTGCTCTGCT
CGTTGTGCCCCGTGCTTTCTAGACGAAACCTGGGAGGAACGGTCGCCCGA
GTGGCTGTGCAGGAACACTCGTATGTGGAAAGCTTCAGGACCAAGCACCT
GCGAACGTTCAACTTCGTCCTGAACGCAGTGAAGTACGAGCAGTGCAGCC
AGCACGCCACGGAGGTTAGTTGTGGCGGCCTTCGCTTGCGGCGATGGACG
GACCCAGATTTTTTCTCCCCCATTACACCTAACCGTACCCCCCTCAGATG
CGGTGCCTGACCAAGGAAAGTCACAGCGACGCGGCCATGAGTTGTGTCTT
TTCCCCTCATTTCCTTCACTCGCCAACCCGACTTCTGCGTGCCCGCTTGT
ATAGCACAAGGTTATGTAATGGAGTTGTACTTGCCTTCGAGTTGTGGAAG
GCGATCAGTCTTTGTGGGCAGCACCAACGACGCTGCTGGTATTCATGTCA
ATGCCGAACCTGACTTCCCTCCCGAACCCCCCCCCCCCCCTGTCGCACAC
CGCCCTTACCCATGGGTAAGCCGTGTTGGCAGGACACTGAAGCACAGATC
CTCGGGGCTCTCAGTTACGAGGCGATACCTGTCGTGCGTGACGAAGAGGC
GGCGCGGAGACTGTTCGAGGAGTTGGTGGCAGACCCGACGAAGGCGAACC
TCACGTACGACACCGGCTCCGGAGAGTTGGTGGACCCTTCAATACCGACG
TCCGAAGCCGCTTGTGTCTCCATGGTGTCCCGCACATCCGTGCCTCACTT
CGCGGAGTTACTTCGTGACCAGAACGTCCACACGGTGGTGCGCATCACAC
CGATGTCTACGGCGTCCGAGTGCGGTCACCTCGTCGCCCTTGGACCGGAC
GGCTTCTTCCTCTGCACGTGCCTGCGGCAGCTCGTCTACGGGCTACTTTG
CCCGCACGCCATCAAGGCCTTGTGGTACCAGCGTGCCTCCCAATTCAACG
GAGCAACCATTTCACCAAGGTGGCGTGACAGTGAGACGCCATGGACGATG
GCAGCGCTGGCCGCTAAGCCTGCCAAGCTATCGACCGGAGCTGCGGGGCT
GACGGGACCTGCGGGGCCTACCGGACAGATGCCGCCCGTCGACACCAGTC
CGATCGTGTCGTCCCACTCCGGACTCAACTTGTCGGCCTACGCGTACGCC
AACGGCGTCGCCTTAGGGAAGGAGCTGGGTGGTATGTTCAAAGAGGTCCC
GTCTGTGGCGAGCATCCAACGCTTGATGGAGTCCATGAAGCTTCACGCCA
AGCAACAAATCGAGGTGGAGAAGCGGTCGTTACGAGACGAGTCAACGAGC
CGGGTGTTCACGGGAACTCTCCCCCGGCCCACCCCTGCCCTGCCGCAGGG
AGACGCCGGGGACCCTGGTCGGGGGGGGCGCGGCCGGGGGGGAAAGGGGT
CTACCGGAAGAGGACGGGCAGGGGAAAAGGGTGACCCTGGAAGCAGCAGC
CAGGGAAGCGGTGGCGGTGGAAACGGCGGCCGGCGAAGCGGGGGCAGGGG
CGGAGGGACAGGCCACGGGCGCGCAGGGGGGAGCGTAAACTCTGCTGGTT
TCGCTACGGGTTCGCCGAGCGGTACCACGGGGGTTCGCCGAGCGTCCCAC
CCTCCGGCAGGATCGGACACCACCAGCGCCGCGCCTATTGGCTTCCAGGC
GGCACCCGTCAACGGGGCGCACACGTCCGAGGGCTTGGCGTTGCCGTTTC
GTGCCCTGGACAACGTGGACGTTTCTCGTCGCGGGGGGGGGCAGGCTTCG
CCACCTTTCCAGACGACCGCCCATCTTGTTCAGTTGGGGCGTCTGCAACC
ACCGCCCCGTAAGAAGCAAACGGGGCCGAGCAAACGACACAAAAGTAGTA
GTGCGGCGTAGTGGAGGAGACCATTTACCTGTAGGACACGTCAGGAAAAT
GTAAAGCGTGTTGCCGATGCCTTACTCGGCGTTGCATTCGCTTTGTTACC
GTTGGAGCGTGTTGGTTTGCGCGCGCGTGTGGATGTGTGTTGCGTGTGTT
GGGGGGTCTGCCAACAGCATCTGTTGTGTCGGATTGGTATTATTTCCTTC
GGTAGCCGGCCCGCCGCAGCAAGGAGAAGGGGGATTCGCTTGGAAAACCA
TTGCCGGTTGGCAGGGGTGGAGGGGCAAGAGTCTCTCGACCCCGCGGAGT
CTTCGTTCTTCCCCGTGTCCGATATGTTTTGAGTTTTTTTTTGCGCGTTG
GATGAGAGTACCGCTGGTCCCTTTATCATGACCACTCATTGGAATTAAGT
TGCAGCCTTGATTCGCCGTCGTGATGGTGTATCTTCATTGCCCGTTGACA
TTTTATGCGGTTTCCCTAGAGCTCTCCGGTTTTGAAAGTACTCGCGTGTT
CATGATG

Coding sequence (CDS) from alignment at chr_00:4187997..4194503+

>Ec-00_003820.2 ID=Ec-00_003820.2|Name=Ec-00_003820.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1140bp|location=Sequence derived from alignment at chr_00:4187997..4194503+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGTCCCGCACATCCGTGCCTCACTTCGCGGAGTTACTTCGTGACCA
GAACGTCCACACGGTGGTGCGCATCACACCGATGTCTACGGCGTCCGAGT
GCGGTCACCTCGTCGCCCTTGGACCGGACGGCTTCTTCCTCTGCACGTGC
CTGCGGCAGCTCGTCTACGGGCTACTTTGCCCGCACGCCATCAAGGCCTT
GTGGTACCAGCGTGCCTCCCAATTCAACGGAGCAACCATTTCACCAAGGT
GGCGTGACAGTGAGACGCCATGGACGATGGCAGCGCTGGCCGCTAAGCCT
GCCAAGCTATCGACCGGAGCTGCGGGGCTGACGGGACCTGCGGGGCCTAC
CGGACAGATGCCGCCCGTCGACACCAGTCCGATCGTGTCGTCCCACTCCG
GACTCAACTTGTCGGCCTACGCGTACGCCAACGGCGTCGCCTTAGGGAAG
GAGCTGGGTGGTATGTTCAAAGAGGTCCCGTCTGTGGCGAGCATCCAACG
CTTGATGGAGTCCATGAAGCTTCACGCCAAGCAACAAATCGAGGTGGAGA
AGCGGTCGTTACGAGACGAGTCAACGAGCCGGGTGTTCACGGGAACTCTC
CCCCGGCCCACCCCTGCCCTGCCGCAGGGAGACGCCGGGGACCCTGGTCG
GGGGGGGCGCGGCCGGGGGGGAAAGGGGTCTACCGGAAGAGGACGGGCAG
GGGAAAAGGGTGACCCTGGAAGCAGCAGCCAGGGAAGCGGTGGCGGTGGA
AACGGCGGCCGGCGAAGCGGGGGCAGGGGCGGAGGGACAGGCCACGGGCG
CGCAGGGGGGAGCGTAAACTCTGCTGGTTTCGCTACGGGTTCGCCGAGCG
GTACCACGGGGGTTCGCCGAGCGTCCCACCCTCCGGCAGGATCGGACACC
ACCAGCGCCGCGCCTATTGGCTTCCAGGCGGCACCCGTCAACGGGGCGCA
CACGTCCGAGGGCTTGGCGTTGCCGTTTCGTGCCCTGGACAACGTGGACG
TTTCTCGTCGCGGGGGGGGGCAGGCTTCGCCACCTTTCCAGACGACCGCC
CATCTTGTTCAGTTGGGGCGTCTGCAACCACCGCCCCGTAAGAAGCAAAC
GGGGCCGAGCAAACGACACAAAAGTAGTAGTGCGGCGTAG

Synonyms

The feature 'Ec-00_003820.2' has the following synonyms


Synonym
Esi0258_0027
Esi_0258_0027