Ec-00_003810.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003810.1
Unique NameEc-00_003810.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length790
Homology
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 1576 bits (4080), Expect = 0.000e+0
Identity = 789/789 (100.00%), Postives = 789/789 (100.00%), Query Frame = 1 
Query:    1 MTEWIWTPRSWWGGVRSWFPTTYTRARTAARCQVSGGLVLSRGFGVGGTHPCLHQTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMVRLPDRNASRPRHSATTSGRSWGRQQTPW 2367
            MTEWIWTPRSWWGGVRSWFPTTYTRARTAARCQVSGGLVLSRGFGVGGTHPCLHQTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMVRLPDRNASRPRHSATTSGRSWGRQQTPW
Sbjct:    1 MTEWIWTPRSWWGGVRSWFPTTYTRARTAARCQVSGGLVLSRGFGVGGTHPCLHQTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMVRLPDRNASRPRHSATTSGRSWGRQQTPW 789
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 608 bits (1569), Expect = 4.960e-203
Identity = 328/394 (83.25%), Postives = 332/394 (84.26%), Query Frame = 1 
Query:  187 PGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPGDQRGQR 1368
            P    G    FYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEE                                          DLADGNYDIVRNRRTDDQTEYALKVISTA TGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGID+FHQDAQNSL KIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVW LSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASS+ATHLLRSSSFNDETVASIDR QREK    S+  GD+ G R
Sbjct:  397 PWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEE------------------------------------------DLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVSLMSML-GDKHGGR 747
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 2.350e-62
Identity = 142/384 (36.98%), Postives = 212/384 (55.21%), Query Frame = 1 
Query:  172 QSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREK 1323
            Q  + P    G    F+D+R    ++N      VF  P  +FTDAF+F  +GG  Y I AT  +   ST++AFRR+  +W L  L APR RW+ +L  +   I  +Q GCRAR+ I  +                         + R  + T  PC+VC + Q++L DG YDI  N R  D  +++L ++    T T++  +S++ GV    V NP R+H+HLN V++ G+D+ HQD  NS  +  K ++ GLS A G   L+ L KDPSLR++G+ PL+D VS+GG+++ +  D+W L+ V+ L+FR VL   AS+K+   A F  ++   LG  +    T + V++ LR LL A SEA+H LR SSF D+ +  +   QREK
Sbjct:  300 QPKVLPWRFEGLYGLFFDKRAARVYFNK-AGLPVFSIPLVIFTDAFNFFQRGGSPYSINATHFT-IGSTTRAFRRRLESWDLCSLGAPRARWEQELDGVFGTIGKMQNGCRARVCIDGE------------------------PVVRSGSGTFKPCNVCNVTQDELGDGQYDIAGNARMMDGIDHSLSLVRKEATKTKQGIVSTREGVVGAFVRNPVREHLHLNPVKSIGVDIMHQDPLNSFGRAMKAMVDGLSPA-GRTWLAALVKDPSLRISGSEPLKDIVSEGGWASQTASDLWRLAEVSTLLFRGVLADTASLKKYMRAAFVEEVGDRLGLASGDHGTGSAVLKSLRDLLYALSEASHCLRLSSFGDKDIQRLLEVQREK 656
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: D7FGT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT2_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 3.450e-33
Identity = 72/117 (61.54%), Postives = 79/117 (67.52%), Query Frame = 1 
Query:  187 PGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEE 537
            P    G    F+DRR+ G+HWN+D+ER VFLTPAHLFTDAFDFRNQ G                         AWPLVGLSAPRVRW+DDLGFILE ISVLQKGCRARLA ADKV+E
Sbjct:   97 PWRPEGAERLFHDRRRTGNHWNHDEERLVFLTPAHLFTDAFDFRNQLG-------------------------AWPLVGLSAPRVRWKDDLGFILEAISVLQKGCRARLATADKVKE 188
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.870e-32
Identity = 106/383 (27.68%), Postives = 178/383 (46.48%), Query Frame = 1 
Query:  187 PGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVE-EVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQ 1332
            P  Q+G    F+DRR +G H N      VF T     +DAF++ +  G  Y + AT +      S A  R+  +W L  L  P   W+ D+  ++++I +LQ GC+A +A+ DK       R+GLL  + DSP   L    K    KT   C  C + ++DL +  YDIV+N R+ D     L ++++     ++  +S   GV      NP  + V  + V   G+D+ HQ A N+ +KI   +L  L  A G  ++        +      P+ D  S GG++AL+G  +W +SS+   +  P+      +     A    ++   +   + T      V    + L+ A S ++ ++RS SF  E + ++ +SQ ++  Q
Sbjct:    3 PWRQQGYHGWFFDRRASGVHANLTGLP-VFSTGLACSSDAFNYFSLSGKRYSVNATFVG-LGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDE-VTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSA-GSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQ 381
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: A0A6H5K6B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B6_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 7.310e-27
Identity = 65/81 (80.25%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:  217 FYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVS----YPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRW 447
            FYDRR+ G+HWNN KERRVFLT AHL TDAFDFRNQ  VS    Y IKATLLSPFASTSQAFR QPGAW LVGLSA RVRW
Sbjct:  285 FYDRRRTGNHWNNGKERRVFLTSAHLSTDAFDFRNQASVSRRASYSIKATLLSPFASTSQAFR-QPGAWLLVGLSALRVRW 364
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 8.450e-23
Identity = 85/295 (28.81%), Postives = 131/295 (44.41%), Query Frame = 1 
Query:  469 LEVISVLQKGCRARLAIADK-VEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPG 1350
            +++I  LQ GC+A  +I DK       RLGLL  + DSP   L    K    KT   C  C + + DL +  YDIV+N RT D     L  ++       R  LS   GV      NP +  V  + V   G+D+ HQ A NS +KI   ++  L  A G  ++        +      P+ D  S GG+SAL+G  +W +SS    +  P+  S  ++ R        ++   +     T      V    + L+ A S +  ++RS SF  E + ++ +SQ E+  Q++   G
Sbjct:    1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNP-QDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPA-GSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMG 293
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.070e-17
Identity = 112/379 (29.55%), Postives = 173/379 (45.65%), Query Frame = 1 
Query:  229 RQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKV-----EEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQED------LADGNYDIVRNRRTDDQTEYA---LKVISTAPTGTQRQALSSKHGV-TPQEVENPFRKHVHLNMVRTF---GIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCL-AKDPSLRV-AGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASID 1305
            R+ G + NND     F  P   + +AF+    G   + +  T    +   SQA +R      +  L++       ++G   E++ +LQ+GC     + D       +EVF R GLL+   D P R  +LG K   + +  PC  C + Q D      L +  YDI  +RRT  Q       LK ++  P    RQ++     + TP     P       +  R     G      D   S +      L  LS  +G  L+S + A++PSL   AGT  L+D V++  +S+L+G D WTL S+ LLVFRPVL +V +MK+       N  R ++    D   TD +V+E L+ L+  +S  +  +R+ S ND  +A +D
Sbjct:  299 RREGFNLNNDNLV-FFSAPVVCYNNAFNCFGMGN-KHSVGGTYFG-WPWRSQAVQRLRQQTHVGTLASTGASCAGEIGLQCEILGLLQRGCVGECTLKDDDGATYNQEVFVRGGLLMWCGDGPGRAKVLGSKACNHFSRFPCPYCMVEQRDNITGGDLGNAQYDIDAHRRTWGQITAGFDTLKSLADNPAEHSRQSMVYWGLLRTPTAPPCPCTTQCSPSRPRWSLWSGCTSMPCDL-GSCQLCQVSCLEMLS-TQGRRLVSAVVAQNPSLLYPAGTERLKDIVTN--YSSLTGSDKWTLQSIMLLVFRPVLANVGAMKK-------NMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLD 663
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: A0A6H5JWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD2_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.480e-11
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 1 
Query:  862 IDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSC-LAKDPSLRV-AGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASID 1305
            ++  H DA  S +     LL  LS  +G  L+S  +++ PSL   AGT  L+D VS+  +S+L+G D WTL S+ LLVFRPVL+ V +MK+       ND+R   G       TD +V+E L+ L+  +S  ++ +R+ S ND  ++ +D
Sbjct:   11 VERLHFDALGSCQLCQVFLLEMLS-TRGRRLVSAVMSQTPSLLYPAGTERLKDIVSN--YSSLTGSDKWTLQSIMLLVFRPVLQDVRAMKKNMKRQDINDLREIWG-------TDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLD 150
[Close]
BLAST of Ec-00_003810.1 vs. uniprot
Match: D7FXD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.620e-9
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 1 
Query: 1801 VCPIGQED----LADGNYDIVRNRRT-----DDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNS--LRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVA-GTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMV 2283
            +CP   +D    L +  YDI  NRRT     D   E AL V   A    +   L    G +      P    +H+N +R   I+  H DA  S  L ++F  +L  LS      + S +A+ PSL    GT  L+D V++  +S+L+G D WTL S+ LLVFRPVL+ V S+V
Sbjct:    1 MCPQADDDTGGELGNARYDIETNRRTYGQMKDGFAELALLVDQPAEQARKSMELGLAAG-SANGPGLPLWTSLHINPLRHMPIERLHFDALGSCQLNQVF--VLELLSTQGRRLVQSVMAQPPSLLYPPGTEHLKDIVTN--YSSLTGSDKWTLQSMLLLVFRPVLQDVESLV 168
The following BLAST results are available for this feature:
BLAST of Ec-00_003810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LJH2_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW6_ECTSI4.960e-20383.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYQ6_9PHAE2.350e-6236.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGT2_ECTSI3.450e-3361.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZI4_ECTSI2.870e-3227.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6B6_9PHAE7.310e-2780.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWW9_ECTSI8.450e-2328.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9E1_9PHAE3.070e-1729.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWD2_9PHAE3.480e-1137.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXD1_ECTSI1.620e-935.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4179043..4185166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2370
Hectar predicted targeting categoryother localisation
Gene idEc-00_003810.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003810Ec-00_003810Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4179043..4185166 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003810.1Ec-00_003810.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4179043..4185166 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003810.1.8Ec-00_003810.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4179043..4179115 -
Ec-00_003810.1.7Ec-00_003810.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4179262..4179863 -
Ec-00_003810.1.6Ec-00_003810.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4180625..4180837 -
Ec-00_003810.1.5Ec-00_003810.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4181687..4181845 -
Ec-00_003810.1.4Ec-00_003810.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4182072..4182272 -
Ec-00_003810.1.3Ec-00_003810.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4182436..4183020 -
Ec-00_003810.1.2Ec-00_003810.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4183781..4183993 -
Ec-00_003810.1.1Ec-00_003810.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4184843..4185166 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003810.1CDS:Ec-00_003810.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4179043..4179115 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003810.1 ID=Ec-00_003810.1|Name=Ec-00_003810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=790bp
MTEWIWTPRSWWGGVRSWFPTTYTRARTAARCQVSGGLVLSRGFGVGGTH
PCLHQTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFT
DAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQ
DDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLL
GMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTA
PTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLR
KIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSG
MDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTD
TEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPG
DQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYP
IKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQ
KGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCH
VCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHG
VTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAK
GVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVF
RPVLRSVASMVRLPDRNASRPRHSATTSGRSWGRQQTPW*
back to top

spliced messenger RNA

>Ec-00_003810.1 ID=Ec-00_003810.1|Name=Ec-00_003810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2370bp|location=Sequence derived from alignment at chr_00:4179043..4185166- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGAGTGGATCTGGACACCTCGAAGTTGGTGGGGAGGTGTGAGGTC
GTGGTTTCCGACGACGTACACACGGGCGAGGACGGCAGCGCGTTGCCAAG
TTTCAGGGGGGTTGGTTTTGTCAAGAGGCTTCGGAGTGGGCGGCACACAC
CCCTGCCTTCACCAGACCCTGCAGTCAAGCATCTTCCCTGGAGACCAGAG
GGGGCAGAGGGCCTCTTTTTACGATCGACGACAGAACGGAAGCCATTGGA
ACAATGACAAGGAGCGCAGAGTGTTCTTGACGCCGGCCCATCTGTTCACG
GACGCCTTCGACTTTCGCAACCAGGGAGGGGTATCCTACCCCATCAAAGC
TACGCTGCTCAGCCCTTTCGCGTCGACCTCTCAAGCTTTTCGTCGTCAGC
CTGGGGCATGGCCGTTAGTCGGGCTTTCGGCGCCTAGGGTGAGGTGGCAG
GACGATCTGGGCTTCATTTTGGAGGTTATCAGCGTTCTGCAGAAGGGGTG
CCGGGCAAGGCTCGCGATTGCGGACAAGGTCGAAGAGGTGTTTTTCCGGC
TTGGTTTGTTGTTGTGCGACGCGGATTCACCAGAACGCCAATTACTGTTG
GGCATGAAGCGGGTAACCAACAAAACGCTGATGCCATGTCACGTGTGCCC
CATCGGCCAAGAGGACCTAGCCGATGGAAACTACGACATCGTGCGCAACC
GCCGCACCGATGATCAGACCGAGTACGCCCTTAAGGTGATCAGCACGGCC
CCCACCGGGACGCAACGGCAGGCGCTTTCGTCTAAACACGGTGTGACCCC
GCAAGAGGTAGAGAACCCTTTCCGAAAGCACGTGCACTTGAACATGGTGC
GGACGTTCGGGATAGACCTGTTTCACCAGGACGCCCAGAATTCCCTTCGG
AAAATCTTTAAGCGCCTCTTGGGCGGTCTCTCGAAAGCGAAGGGCGTGCC
CCTCCTCTCGTGTCTAGCGAAAGATCCTTCTCTGCGAGTCGCCGGCACAC
CACCGCTCAGGGACTTCGTGAGCGATGGCGGGTTCTCCGCTCTGTCTGGG
ATGGATGTCTGGACACTGTCGAGTGTAGCCCTCCTCGTCTTCCGCCCGGT
CTTGAGGAGCGTGGCGTCGATGAAACGCCTCACGACCGCGCCATTCCGCA
ACGACATCCGGGCGGAGCTGGGGGCGACAACAGACACCGTGGTAACAGAC
ACCGAGGTGATGGAGAAACTACGGGCCCTACTGCTCGCCTCCTCCGAGGC
GACGCACTTGTTGCGCTCAAGCTCCTTCAACGACGAGACCGTGGCATCCA
TCGATAGGTCACAGCGAGAGAAGACCCTGCAGTCAAGCATCTTCCCTGGA
GACCAGAGGGGGCAGAGGGCCTCTTTTTACGATCGACGACAGAACGGAAG
CCATTGGAACAATGACAAGGAGCGCAGAGTGTTCTTGACGCCGGCCCATC
TGTTCACGGACGCCTTCGACTTTCGCAACCAGGGAGGGGTATCCTACCCC
ATCAAAGCTACGCTGCTCAGCCCTTTCGCGTCGACCTCTCAAGCTTTTCG
TCGTCAGCCTGGGGCATGGCCGTTAGTCGGGCTTTCGGCGCCTAGGGTGA
GGTGGCAGGACGATCTGGGCTTCATTTTGGAGGTTATCAGCGTTCTGCAG
AAGGGGTGCCGGGCAAGGCTCGCGATTGCGGACAAGGTCGAAGAGGTGTT
TTTCCGGCTTGGTTTGTTGTTGTGCGACGCGGATTCACCAGAACGCCAAT
TACTGTTGGGCATGAAGCGGGTAACCAACAAAACGCTGATGCCATGTCAC
GTGTGCCCCATCGGCCAAGAGGACCTAGCCGATGGAAACTACGACATCGT
GCGCAACCGCCGCACCGATGATCAGACCGAGTACGCCCTTAAGGTGATCA
GCACGGCCCCCACCGGGACGCAACGGCAGGCGCTTTCGTCTAAACACGGT
GTGACCCCGCAAGAGGTAGAGAACCCTTTCCGAAAGCACGTGCACTTGAA
CATGGTGCGGACGTTCGGGATAGACCTGTTTCACCAGGACGCCCAGAATT
CCCTTCGGAAAATCTTTAAGCGCCTCTTGGGCGGTCTCTCGAAAGCGAAG
GGCGTGCCCCTCCTCTCGTGTCTAGCGAAAGATCCTTCTCTGCGAGTCGC
CGGCACACCACCGCTCAGGGACTTCGTGAGCGATGGCGGGTTCTCCGCTC
TGTCTGGGATGGATGTCTGGACACTGTCGAGTGTAGCCCTCCTCGTCTTC
CGCCCGGTCTTGAGGAGCGTGGCGTCGATGGTAAGATTGCCCGACAGAAA
CGCCTCACGACCGCGCCATTCCGCAACGACATCCGGGCGGAGCTGGGGGC
GACAACAGACACCGTGGTAA
back to top

protein sequence of Ec-00_003810.1

>Ec-00_003810.1 ID=Ec-00_003810.1|Name=Ec-00_003810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=790bp
MTEWIWTPRSWWGGVRSWFPTTYTRARTAARCQVSGGLVLSRGFGVGGTH
PCLHQTLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFT
DAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQ
DDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLL
GMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTA
PTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLR
KIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSG
MDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTD
TEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPG
DQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYP
IKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQ
KGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCH
VCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHG
VTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAK
GVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVF
RPVLRSVASMVRLPDRNASRPRHSATTSGRSWGRQQTPW*
back to top

mRNA from alignment at chr_00:4179043..4185166-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003810.1 ID=Ec-00_003810.1|Name=Ec-00_003810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6124bp|location=Sequence derived from alignment at chr_00:4179043..4185166- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGGAGTGGATCTGGACACCTCGAAGTTGGTGGGGAGGTGTGAGGTC
GTGGTTTCCGACGACGTACACACGGGCGAGGACGGCAGCGCGTTGCCAAG
TTTCAGGGGGGTTGGTTTTGTCAAGAGGCTTCGGAGTGGGCGGCACACAC
CCCTGCCTTCACCAGACCCTGCAGTCAAGCATCTTCCCTGGAGACCAGAG
GGGGCAGAGGGCCTCTTTTTACGATCGACGACAGAACGGAAGCCATTGGA
ACAATGACAAGGAGCGCAGAGTGTTCTTGACGCCGGCCCATCTGTTCACG
GACGCCTTCGACTTTCGCAACCAGGTGTGCATCTCGTTTATTTTTTTTTC
CTCGTGTCACTCAATTTTGTACTTCTAGGGTTTTGTCATGTTTCATGCTT
CTGTACTTCTTTCTCTCGCGGCAGCGAGTCTTTTCTCGCGATTTCTTCTC
AGGGGCAAGCAGGAGCCTCGTCGGTACAATATCGCTCGTGCCCCGACCTC
CGTAGGCCTCCGTATCGCGTGTGATTGACGGTCAAAGCTGTGAAAACTGG
CTCTATACCCCGGGGGCGGGTTCGGCGCAGACAAAGCCTGGCGAACCAAT
TCTGAAACCCATCCACAACGACAGTTTGAAATATTTACCTCCACATTCAT
TCATGCATTCGCTGATTCCACATCGCTGTGACTGTTCGTGTTGTCGCAAT
GTCCAAACAGTACCCACCTACGTTTGTTTGGTCATTTACACGTGGCAGCG
ATGAACAGTATTTTGTTTGTGACGTTCGTTTCGGATTCAGATTCAGTTCT
CATTGGAAACCTGCCACCATTTATCGCAAGACCAATCATAAAAGAGGTCT
GAATTTTCGCTGGCAAGTTGTAGTCAGCTCGAGCTGGCTCCAACGTGGAA
AAACTGTACGTGCGCGATGTTTTGTACTGAATATGAGCGTTATAAAACTG
CCCATCGACAATAAGACACGCCGCCCCTCTTCGGGCAATTGCGCGTGTGT
TCCTGCGTCACCCATGTCCCGAACGGAGACCTTGTACAATATATTTTGGC
GTGCCTCTCTGGAGGGGTGGGGTGTCCCCCCGCTTTGCTGTTTTGTGGAA
CCCACACGACGTGCGTCCCGACATGTTTTTATATACTCCGAGTTCGTTTT
TTCTTGTCTCGGCCGATTCGCAGGGAGGGGTATCCTACCCCATCAAAGCT
ACGCTGCTCAGCCCTTTCGCGTCGACCTCTCAAGCTTTTCGTCGTCAGCC
TGGGGCATGGCCGTTAGTCGGGCTTTCGGCGCCTAGGGTGAGGTGGCAGG
ACGATCTGGGCTTCATTTTGGAGGTTATCAGCGTTCTGCAGAAGGGGTGC
CGGGCAAGGCTCGCGATTGCGGACAAGGTCGAAGAGGTGAGCTGTAGCTG
TCAAGCGACCTTATTTTGTTGCTGTCGCCTGGCGAGGAAATGAGTGTTTT
GTCCTCCTCAGCGTCGCACGAGGAGTGGCAGGACGGAGGTGGCAGAACCG
CGGTAGCGAGACATGTGCCAGACTGATGATGGAGGTGGCAAGAAGAACGC
CTTATTGCTACCCACTCCCCCCTAGGAGCTCCCTCTCGTTGCCCCACACG
TGACGGTGGGGTACGTTTGATAGAGAACAACGACAGGACCCTCCGACTCT
TGTCATTGATACATGCTTCATCTGGGATCCTTTTGTCTCATTTTTGGCAT
CGCGTGTCCGGCAAGCACGGGCAATGGGCCCACTCTCCCTTTCTCTCTTT
TTTTTTTGCGTGCTCGGGTTCGCTAGATACCCTGTGCTTGGAGGATGTTT
TTCTCCGGTTCCTTCTTGTGTGTTTGTTTTTGTCCGTTCGTTGCTTTCTA
GAAAGTAAAAGCAGAGACCACAGGACGTTTTTGTTTGTGTGTGTGAAGAC
GGCAACAACCATCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGTTTTTCT
TTCGATCTATCTCTTTTTATCTTTCCATTTCTCTGGCCTCGATCAAGATT
AGTTGTTGTTTTCGTCCAGCATCTGGTGAGCCACCTGTATGCGACGTAAC
GCCCTACAATTCAATTGCATATGCATACGCGGGTTATTCGCTGACTCCTC
CCGTCACAATCCCACCCACTGTCCTCCCCCCCACCCCGGCGACCAGGTGT
TTTTCCGGCTTGGTTTGTTGTTGTGCGACGCGGATTCACCAGAACGCCAA
TTACTGTTGGGCATGAAGCGGGTAACCAACAAAACGCTGATGCCATGTCA
CGTGTGCCCCATCGGCCAAGAGGACCTAGCCGATGGAAACTACGACATCG
TGCGCAACCGCCGCACCGATGATCAGACCGAGTACGCCCTTAAGGTGATC
AGCACGGCCCCCACCGGGACGCAACGGCAGGCGCTTTCGTCTAAACACGG
TGTGACCCCGCAAGAGGTAGAGAACCCTTTCCGAAAGCACGTGCACTTGA
ACATGGTGCGGACGTTCGGGATAGACCTGTTTCACCAGGACGCCCAGAAT
TCCCTTCGGAAAATCTTTAAGCGCCTCTTGGGCGGTCTCTCGAAAGCGAA
GGGCGTGCCCCTCCTCTCGTGTCTAGCGAAAGATCCTTCTCTGCGAGTCG
CCGGCACACCACCGCTCAGGGACTTCGTGAGCGATGGCGGGTTCTCCGCT
CTGTCTGGGATGGATGTCTGGACACTGTCGAGTGTAGCCCTCCTCGTCTT
CCGCCCGGTCTTGAGGAGCGTGGCGTCGATGGTAAGATTGCCCGACAGGT
GATAATACTATAGTCTAGAGCTCTTGATGCTGCTTTGGGTCTAGTGCTGA
GGGCTGTCACCATGTGCATGCGAACATACAACGAAATACAACAACACCAA
TAAACATTTTACTGCTTTTTGCTCCACCTTCGTGTCGCTCGCAGAAACGC
CTCACGACCGCGCCATTCCGCAACGACATCCGGGCGGAGCTGGGGGCGAC
AACAGACACCGTGGTAACAGACACCGAGGTGATGGAGAAACTACGGGCCC
TACTGCTCGCCTCCTCCGAGGCGACGCACTTGTTGCGCTCAAGCTCCTTC
AACGACGAGACCGTGGCATCCATCGATAGGTCACAGCGAGAGAAGGTACC
CGCCCTTGGCTCACTTGGTGGGAAAAATGGTTTATCACCCGCTTGACCTT
CGTTGTTGTTGTTGCGCTCCTCCACTAATAGCTAAAAGTGACCACCANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGC
ACACACCCCTGCCTTCACCAGACCCTGCAGTCAAGCATCTTCCCTGGAGA
CCAGAGGGGGCAGAGGGCCTCTTTTTACGATCGACGACAGAACGGAAGCC
ATTGGAACAATGACAAGGAGCGCAGAGTGTTCTTGACGCCGGCCCATCTG
TTCACGGACGCCTTCGACTTTCGCAACCAGGTGTGCATCTCGTTTATTTT
TTTTTCCTCGTGTCACTCAATTTTGTACTTCTAGGGTTTTGTCATGTTTC
ATGCTTCTGTACTTCTTTCTCTCGCGGCAGCGAGTCTTTTCTCGCGATTT
CTTCTCAGGGGCAAGCAGGAGCCTCGTCGGTACAATATCGCTCGTGCCCC
GACCTCCGTAGGCCTCCGTATCGCGTGTGATTGACGGTCAAAGCTGTGAA
AACTGGCTCTATACCCCGGGGGCGGGTTCGGCGCAGACAAAGCCTGGCGA
ACCAATTCTGAAACCCATCCACAACGACAGTTTGAAATATTTACCTCCAC
ATTCATTCATGCATTCGCTGATTCCACATCGCTGTGACTGTTCGTGTTGT
CGCAATGTCCAAACAGTACCCACCTACGTTTGTTTGGTCATTTACACGTG
GCAGCGATGAACAGTATTTTGTTTGTGACGTTCGTTTCGGATTCAGATTC
AGTTCTCATTGGAAACCTGCCACCATTTATCGCAAGACCAATCATAAAAG
AGGTCTGAATTTTCGCTGGCAAGTTGTAGTCAGCTCGAGCTGGCTCCAAC
GTGGAAAAACTGTACGTGCGCGATGTTTTGTACTGAATATGAGCGTTATA
AAACTGCCCATCGACAATAAGACACGCCGCCCCTCTTCGGGCAATTGCGC
GTGTGTTCCTGCGTCACCCATGTCCCGAACGGAGACCTTGTACAATATAT
TTTGGCGTGCCTCTCTGGAGGGGTGGGGTGTCCCCCCGCTTTGCTGTTTT
GTGGAACCCACACGACGTGCGTCCCGACATGTTTTTATATACTCCGAGTT
CGTTTTTTCTTGTCTCGGCCGATTCGCAGGGAGGGGTATCCTACCCCATC
AAAGCTACGCTGCTCAGCCCTTTCGCGTCGACCTCTCAAGCTTTTCGTCG
TCAGCCTGGGGCATGGCCGTTAGTCGGGCTTTCGGCGCCTAGGGTGAGGT
GGCAGGACGATCTGGGCTTCATTTTGGAGGTTATCAGCGTTCTGCAGAAG
GGGTGCCGGGCAAGGCTCGCGATTGCGGACAAGGTCGAAGAGGTGAGCTG
TAGCTGTCAAGCGACCTTATTTTGTTGCTGTCGCCTGGCGAGGAAATGAG
TGTTTTGTCCTCCTCAGCGTCGCACGAGGAGTGGCAGGACGGAGGTGGCA
GAACCGCGGTAGCGAGACATGTGCCAGACTGATGATGGAGGTGGCAAGAA
GAACGCCTTATTGCTACCCACTCCCCCCTAGGAGCTCCCTCTCGTTGCCC
CACACGTGACGGTGGGGGTACGTTTGATAGAGAACAACGACAGGACCCTC
CGACTCTTGTCATTGATACATGCTTCATCTGGGATCCTTTTGTCTCATTT
TTGGCATCGCGTGTCCGGCAAGCACGGGCAATGGGCCCACTCTCCCTTTC
TCTCTTTTTTTTTTGCGTGCTCGGGTTCGCTAGATACCCTGTGCTTGGAG
GATGTTTTTCTCCGGTTCCTTCTTGTGTGTTTGTTTTTGTCCGTTCGTTG
CTTTCTAGAAAGTAAAAGCAGAGACCACAGGACGTTTTTGTTTGTGTGTG
TGAAGACGGCAACAACCATCTCTCTCTCTCTCTCTCTCTCTCTCTATGTG
TTTTTCTTTCGATCTATCTCTTTTTATCTTTCCATTTCTCTGGCCTCGAT
CAAGATTAGTTGTTGTTTTCGTCCAGCATCTGGTGAGCCACCTGTATGCG
ACGTAACGCCCTACAATTCAATTGCATATGCATACGCGGGTTATTCGCTG
ACTCCTCCCGTCACAATCCCACCCACTGTCCTCCCCCCCACCCCGGCGAC
CAGGTGTTTTTCCGGCTTGGTTTGTTGTTGTGCGACGCGGATTCACCAGA
ACGCCAATTACTGTTGGGCATGAAGCGGGTAACCAACAAAACGCTGATGC
CATGTCACGTGTGCCCCATCGGCCAAGAGGACCTAGCCGATGGAAACTAC
GACATCGTGCGCAACCGCCGCACCGATGATCAGACCGAGTACGCCCTTAA
GGTGATCAGCACGGCCCCCACCGGGACGCAACGGCAGGCGCTTTCGTCTA
AACACGGTGTGACCCCGCAAGAGGTAGAGAACCCTTTCCGAAAGCACGTG
CACTTGAACATGGTGCGGACGTTCGGGATAGACCTGTTTCACCAGGACGC
CCAGAATTCCCTTCGGAAAATCTTTAAGCGCCTCTTGGGCGGTCTCTCGA
AAGCGAAGGGCGTGCCCCTCCTCTCGTGTCTAGCGAAAGATCCTTCTCTG
CGAGTCGCCGGCACACCACCGCTCAGGGACTTCGTGAGCGATGGCGGGTT
CTCCGCTCTGTCTGGGATGGATGTCTGGACACTGTCGAGTGTAGCCCTCC
TCGTCTTCCGCCCGGTCTTGAGGAGCGTGGCGTCGATGGTAAGATTGCCC
GACAGGTGATAATACTATAGTCTAGAGCTCTTGATGCTGCTTTGGGTCTA
GTGCTGAGGGCTGTCACCATGTGCATGCGAACATACAACGAAATACAACA
ACACCAATAAACATTTTACTGCTTTTTGCTCCACCTTCGTGTCGCTCGCA
GAAACGCCTCACGACCGCGCCATTCCGCAACGACATCCGGGCGGAGCTGG
GGGCGACAACAGACACCGTGGTAA
back to top

Coding sequence (CDS) from alignment at chr_00:4179043..4185166-

>Ec-00_003810.1 ID=Ec-00_003810.1|Name=Ec-00_003810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2370bp|location=Sequence derived from alignment at chr_00:4179043..4185166- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGGAGTGGATCTGGACACCTCGAAGTTGGTGGGGAGGTGTGAGGTC
GTGGTTTCCGACGACGTACACACGGGCGAGGACGGCAGCGCGTTGCCAAG
TTTCAGGGGGGTTGGTTTTGTCAAGAGGCTTCGGAGTGGGCGGCACACAC
CCCTGCCTTCACCAGACCCTGCAGTCAAGCATCTTCCCTGGAGACCAGAG
GGGGCAGAGGGCCTCTTTTTACGATCGACGACAGAACGGAAGCCATTGGA
ACAATGACAAGGAGCGCAGAGTGTTCTTGACGCCGGCCCATCTGTTCACG
GACGCCTTCGACTTTCGCAACCAGGGAGGGGTATCCTACCCCATCAAAGC
TACGCTGCTCAGCCCTTTCGCGTCGACCTCTCAAGCTTTTCGTCGTCAGC
CTGGGGCATGGCCGTTAGTCGGGCTTTCGGCGCCTAGGGTGAGGTGGCAG
GACGATCTGGGCTTCATTTTGGAGGTTATCAGCGTTCTGCAGAAGGGGTG
CCGGGCAAGGCTCGCGATTGCGGACAAGGTCGAAGAGGTGTTTTTCCGGC
TTGGTTTGTTGTTGTGCGACGCGGATTCACCAGAACGCCAATTACTGTTG
GGCATGAAGCGGGTAACCAACAAAACGCTGATGCCATGTCACGTGTGCCC
CATCGGCCAAGAGGACCTAGCCGATGGAAACTACGACATCGTGCGCAACC
GCCGCACCGATGATCAGACCGAGTACGCCCTTAAGGTGATCAGCACGGCC
CCCACCGGGACGCAACGGCAGGCGCTTTCGTCTAAACACGGTGTGACCCC
GCAAGAGGTAGAGAACCCTTTCCGAAAGCACGTGCACTTGAACATGGTGC
GGACGTTCGGGATAGACCTGTTTCACCAGGACGCCCAGAATTCCCTTCGG
AAAATCTTTAAGCGCCTCTTGGGCGGTCTCTCGAAAGCGAAGGGCGTGCC
CCTCCTCTCGTGTCTAGCGAAAGATCCTTCTCTGCGAGTCGCCGGCACAC
CACCGCTCAGGGACTTCGTGAGCGATGGCGGGTTCTCCGCTCTGTCTGGG
ATGGATGTCTGGACACTGTCGAGTGTAGCCCTCCTCGTCTTCCGCCCGGT
CTTGAGGAGCGTGGCGTCGATGAAACGCCTCACGACCGCGCCATTCCGCA
ACGACATCCGGGCGGAGCTGGGGGCGACAACAGACACCGTGGTAACAGAC
ACCGAGGTGATGGAGAAACTACGGGCCCTACTGCTCGCCTCCTCCGAGGC
GACGCACTTGTTGCGCTCAAGCTCCTTCAACGACGAGACCGTGGCATCCA
TCGATAGGTCACAGCGAGAGAAGACCCTGCAGTCAAGCATCTTCCCTGGA
GACCAGAGGGGGCAGAGGGCCTCTTTTTACGATCGACGACAGAACGGAAG
CCATTGGAACAATGACAAGGAGCGCAGAGTGTTCTTGACGCCGGCCCATC
TGTTCACGGACGCCTTCGACTTTCGCAACCAGGGAGGGGTATCCTACCCC
ATCAAAGCTACGCTGCTCAGCCCTTTCGCGTCGACCTCTCAAGCTTTTCG
TCGTCAGCCTGGGGCATGGCCGTTAGTCGGGCTTTCGGCGCCTAGGGTGA
GGTGGCAGGACGATCTGGGCTTCATTTTGGAGGTTATCAGCGTTCTGCAG
AAGGGGTGCCGGGCAAGGCTCGCGATTGCGGACAAGGTCGAAGAGGTGTT
TTTCCGGCTTGGTTTGTTGTTGTGCGACGCGGATTCACCAGAACGCCAAT
TACTGTTGGGCATGAAGCGGGTAACCAACAAAACGCTGATGCCATGTCAC
GTGTGCCCCATCGGCCAAGAGGACCTAGCCGATGGAAACTACGACATCGT
GCGCAACCGCCGCACCGATGATCAGACCGAGTACGCCCTTAAGGTGATCA
GCACGGCCCCCACCGGGACGCAACGGCAGGCGCTTTCGTCTAAACACGGT
GTGACCCCGCAAGAGGTAGAGAACCCTTTCCGAAAGCACGTGCACTTGAA
CATGGTGCGGACGTTCGGGATAGACCTGTTTCACCAGGACGCCCAGAATT
CCCTTCGGAAAATCTTTAAGCGCCTCTTGGGCGGTCTCTCGAAAGCGAAG
GGCGTGCCCCTCCTCTCGTGTCTAGCGAAAGATCCTTCTCTGCGAGTCGC
CGGCACACCACCGCTCAGGGACTTCGTGAGCGATGGCGGGTTCTCCGCTC
TGTCTGGGATGGATGTCTGGACACTGTCGAGTGTAGCCCTCCTCGTCTTC
CGCCCGGTCTTGAGGAGCGTGGCGTCGATGGTAAGATTGCCCGACAGAAA
CGCCTCACGACCGCGCCATTCCGCAACGACATCCGGGCGGAGCTGGGGGC
GACAACAGACACCGTGGTAA
back to top
Synonyms
The feature 'Ec-00_003810.1' has the following synonyms
Synonym
Esi0258_0024
Esi_0258_0024