Ec-00_003730.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003730.1
Unique NameEc-00_003730.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length319
Homology
BLAST of Ec-00_003730.1 vs. uniprot
Match: D7FSK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK1_ECTSI)

HSP 1 Score: 601 bits (1550), Expect = 3.670e-208
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
Query:  166 MREMKKTYNKVWDSLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVHTGRAEGDGTASLYIGLV 1119
            MREMKKTYNKVWDSLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVHTGRAEGDGTASLYIGLV
Sbjct:    1 MREMKKTYNKVWDSLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVHTGRAEGDGTASLYIGLV 318          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5JGS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS6_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.380e-105
Identity = 200/294 (68.03%), Postives = 217/294 (73.81%), Query Frame = 1
Query:  238 PSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVHTGRAEGDGTASLYIGLV 1119
            P GEQE D LDYLLNGVYHLS+GNAEDPIELED DDDL                           EDGG  EESEG  P VGGIKEEPAVGNQG GDGAPS++IEE DG YPDR +KWMHPYLLTYCLIGR SSSEDP+LRT RKT G                    SGS TSGA+T+VDLSS+AIRMFAGAG+ +SRAQVKKE+ AVAAANAQEQ RRVQQ HTGK VTAVEA SAAVVSRQALDE+AAHR+ WDYARLAK+ +     GEVGV+TGRA+GDGTASLYIGLV
Sbjct:  113 PXGEQEEDVLDYLLNGVYHLSSGNAEDPIELEDGDDDL---------------------------EDGGEPEESEGDEPGVGGIKEEPAVGNQGDGDGAPSEDIEEVDGEYPDRGNKWMHPYLLTYCLIGRASSSEDPELRTARKTDG--------------------SGSRTSGAHTEVDLSSSAIRMFAGAGKIQSRAQVKKEYAAVAAANAQEQVRRVQQAHTGKQVTAVEALSAAVVSRQALDEDAAHRARWDYARLAKRPQ-----GEVGVYTGRAKGDGTASLYIGLV 354          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5JWP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP9_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 1.900e-97
Identity = 191/288 (66.32%), Postives = 204/288 (70.83%), Query Frame = 1
Query:  205 SLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVH 1068
            S VEGQPG NLPSGEQE DALDY LNG                                   DNG NDGESPPGQ+EDG         AP VGGIKEEPAVGNQG GDGAPS++IEE DGGYPDR +KWMHPYLLTYCLIGRPSSSEDPDLRT RKTSGPKGR GKQK+++ SP TSD SGSETSGAYT+V LSS+AIR FAGA E +SRAQVK EH AVAAANAQEQARRVQQ HTGKLVTAVEA SAAVVSRQALDE+AAH+         KK K     G   +H
Sbjct:    8 SFVEGQPGGNLPSGEQEEDALDYPLNG-----------------------------------DNGGNDGESPPGQLEDGXXXXXXXXXAPGVGGIKEEPAVGNQGDGDGAPSEDIEEVDGGYPDRSNKWMHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRAGKQKAQKESPSTSDGSGSETSGAYTEVGLSSSAIRTFAGADEIQSRAQVKNEHTAVAAANAQEQARRVQQAHTGKLVTAVEALSAAVVSRQALDEDAAHKLAGITLAWPKKLKSTTSGGSWSLH 260          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5K3M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M7_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 1.370e-90
Identity = 176/227 (77.53%), Postives = 187/227 (82.38%), Query Frame = 1
Query:  592 MHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVHTGRAEGDGTASLYIGLV*MDDAD-LPKPMSKLTPPSAGGTPSTSASASVSSAAASRATTPGVTALPFS 1269
            MHPYLLTYCLIGRPSSSEDPDLRT RKTSGPKGRGGKQK K GSP TSD SGSETSGAYTDVDLSS+AIRMFAGAGE +SRAQVKKEH AVAAANAQEQA RVQQ HTGKLVTAVEA SAAVVSRQALDEEAAHR+ WDYARLAK+AKIDDLRG++       +     +    L  MDDAD +PKP+S  TPP+AGG PSTSASASVSS     ATTP VTALP S
Sbjct:    1 MHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKVKNGSPSTSDGSGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQAPRVQQAHTGKLVTAVEALSAAVVSRQALDEEAAHRARWDYARLAKQAKIDDLRGKLEFTLEGPKAMALRASISALYDMDDADFMPKPISAPTPPAAGGAPSTSASASVSSXXXXXATTPEVTALPAS 227          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5KPB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB5_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 3.260e-88
Identity = 208/382 (54.45%), Postives = 228/382 (59.69%), Query Frame = 1
Query:  322 IELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYA-------------------------------------------------RLAKKAKIDDLRGEVGVHTGRAEGDGTASLYIGLV*MDDAD-LPKPMSKLTPPSAGGTPSTSASASVSSAAASRATTPGVTALPFSISTSPVASTAASAVGP 1317
            +  ED DDD+   AD GG AGLQD G ND                          IK+EPAVGNQG GDGAPS++IEE DGG PDRP+KWMHPYLLTYCLIGRPSSSEDPDLRT RKTSG KGRGGKQ +K+GSP T D SGSETSGAYT+VDLSS+AIRMFAG GE +SRAQ+KKEH  VAAANAQEQARRVQQ HTGKLVTAV A SAAVVS QALDEEAAHR  WDYA                                                 RLA+KAK DD  G++             +    L  MDDAD + KP+S  TPP+A G PS SAS          AT P VTALP     SP  ST ASA+ P
Sbjct:    1 MTTEDGDDDV---ADGGGPAGLQDKGGNDXXXXXXXXXXXXXXXXXXXXXXXXXXIKKEPAVGNQGHGDGAPSEDIEEVDGGCPDRPNKWMHPYLLTYCLIGRPSSSEDPDLRTARKTSGLKGRGGKQNAKKGSPSTIDGSGSETSGAYTEVDLSSSAIRMFAGTGEIQSRAQMKKEHAVVAAANAQEQARRVQQAHTGKLVTAVGALSAAVVSMQALDEEAAHRGRWDYAXPAKFKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAEKAKTDDPSGKLEFILEGPRAMALRASISALYDMDDADFMLKPVSAPTPPAAAGAPSISASXXXXXXXXPPATAPEVTALPAXXXXSPAGSTPASAIDP 379          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5JU95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU95_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 2.170e-74
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 1
Query:  592 MHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEV 1059
            MHPYLLTYCLIGRPSSSEDPDLRT RKTSGPKGRGGKQK+K+GSP TSD SGSETSGAYTDVDLSS+AIRMFAGAGE +SRAQVKKEH AVAAANAQEQARRVQQ HT  LVTAV A SAAVVSRQALDEEAAHR+ WDYARLAKKAKIDDLRG++
Sbjct:    1 MHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSPSTSDGSGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQARRVQQAHTVFLVTAVGALSAAVVSRQALDEEAAHRARWDYARLAKKAKIDDLRGKL 156          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5KXV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV2_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.420e-73
Identity = 138/160 (86.25%), Postives = 146/160 (91.25%), Query Frame = 1
Query:  562 GGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQA---RRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKA 1032
            GGYPDRP+KWMHPYLLT CL+GRPSSSEDPDLRT RKTSGPKGRGGKQK+K+GSP TSD SGSETSGAYT+VDLSS+AIRMFAG GE +SRAQVKKEH AVAAANAQEQA   RRVQQ HTGKLVTAVEA SAAVVSRQALDEEAAHR+ WDYARLA KA
Sbjct:  117 GGYPDRPNKWMHPYLLTCCLVGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSPSTSDGSGSETSGAYTEVDLSSSAIRMFAGGGEIQSRAQVKKEHAAVAAANAQEQAEQARRVQQAHTGKLVTAVEALSAAVVSRQALDEEAAHRARWDYARLANKA 276          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5JZK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK0_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.010e-65
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 2
Query: 1919 MPCPAGSRCVATPDHTPAPPQFTNHTCRVCGGYLHGLCGVPDPLSDNEMHRVCHGCVNSNNRKESSTDSTAGAASSKRPCAGGRATGKAKQAGALGSLNPVGNTAPRKVRGAENRKRPTLDQKVRALDLLKSMS 2320
            MPC AGSRC+ATPDH PAPP FTNH CRVCGG+LHGLCGV D L D+EMHRVCHGCVNS+NRKESSTDSTAGAASSK PC  GRATGK K+A ALGSL PVGNTA RKVRGAEN KRP L+ KVRALDLLKSMS
Sbjct:    1 MPCAAGSRCLATPDHAPAPPLFTNHPCRVCGGHLHGLCGVHDLLGDDEMHRVCHGCVNSSNRKESSTDSTAGAASSKHPCPDGRATGKEKRASALGSLKPVGNTARRKVRGAENHKRPKLEDKVRALDLLKSMS 134          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5K2E1_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E1_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 6.120e-63
Identity = 115/135 (85.19%), Postives = 121/135 (89.63%), Query Frame = 2
Query: 1919 MPCPAGSRCVATPDHTPAPPQFTNHTCRVCGGYLHGLCGVPDPLSDNEMHRVCHGCVNSNNRKESSTDSTAGAASSKRPCAGGRATGKAKQAGALGSLNPVGNTAPRKVRGAENRKRPTLDQKVRALDLLKSMSG 2323
            MPC AGSRC+ATPDHTP PP FTNH CRVCGGYL+GLCGV D L DNEMHRVCHGCVNS+NRKESSTDSTAGAASSKRPC  GRAT K K+AGALGSL PVGNTA +KVRGAENRKRPTL+ KVRALDLLKSMSG
Sbjct:    1 MPCAAGSRCLATPDHTPGPPLFTNHPCRVCGGYLYGLCGVHDLLGDNEMHRVCHGCVNSSNRKESSTDSTAGAASSKRPCPDGRATEKEKRAGALGSLEPVGNTAHKKVRGAENRKRPTLEDKVRALDLLKSMSG 135          
BLAST of Ec-00_003730.1 vs. uniprot
Match: A0A6H5J848_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J848_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 2.750e-57
Identity = 145/229 (63.32%), Postives = 163/229 (71.18%), Query Frame = 1
Query:  592 MHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRG--------GKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGVHTGRAEG-DGTASLYIGLV*MDDADLPKPMSKLTPPSAGGTPSTSASASVSSAAASRATTPGV 1251
            MH YLLT+CLIGRP SSEDPDLRT RKTSGP GRG        G QK+K+GSPGTSDESGSE SGAYT++DLSSNAIRMF GAGE  S AQVK E  AVAAANAQ QARRVQ+T+TGKLVTAVEA SAAVVSRQ+LDEEAA R+    AR AKKAKI DL+G +       +  +  A++       D   L KP+S  TPP AG    TSAS     AAA+RA+T GV
Sbjct:    1 MHQYLLTFCLIGRPCSSEDPDLRTARKTSGPNGRGASGAKGCGGTQKAKKGSPGTSDESGSE-SGAYTEIDLSSNAIRMFTGAGEIESLAQVK-ETAAVAAANAQLQARRVQETNTGKLVTAVEALSAAVVSRQSLDEEAAGRARLADAREAKKAKIADLKGMLEYAPSEQKTMELRAAIMAAYEQPDSYFLAKPISAATPPGAGAALRTSASXXX--AAATRASTAGV 225          
The following BLAST results are available for this feature:
BLAST of Ec-00_003730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK1_ECTSI3.670e-208100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGS6_9PHAE1.380e-10568.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWP9_9PHAE1.900e-9766.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3M7_9PHAE1.370e-9077.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPB5_9PHAE3.260e-8854.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU95_9PHAE2.170e-7488.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXV2_9PHAE1.420e-7386.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZK0_9PHAE1.010e-6582.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2E1_9PHAE6.120e-6385.19HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5J848_9PHAE2.750e-5763.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:4041256..4054058 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2593
Hectar predicted targeting categoryother localisation
Gene idEc-00_003730.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003730Ec-00_003730Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 4041256..4054058 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003730.1Ec-00_003730.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 4046302..4052589 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003730.1.1Ec-00_003730.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4041256..4041369 +
Ec-00_003730.1.2Ec-00_003730.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4046249..4046342 +
Ec-00_003730.1.3Ec-00_003730.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 4051674..4054058 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0037305UTR:Ec-00_003730.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 4041256..4041369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003730.1CDS:Ec-00_003730.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 4046302..4046342 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0037303UTR:Ec-00_003730.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 4052590..4054058 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003730.1 ID=Ec-00_003730.1|Name=Ec-00_003730.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=319bp
MREMKKTYNKVWDSLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAE
DPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEG
GAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTY
CLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGA
YTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHT
GKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGV
HTGRAEGDGTASLYIGLV*
back to top

spliced messenger RNA

>Ec-00_003730.1 ID=Ec-00_003730.1|Name=Ec-00_003730.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2593bp|location=Sequence derived from alignment at chr_00:4041256..4054058+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGGACAGCAGCAGCCGCCTAACGCAGTAGCGGCGGCAGTTTAGAAAGACG
GGACGGGACACGGCGCAAGCATTGGGGAAGCGACCAGCGCGCGCTCGGGA
CCCTGCATATAAAGCGTCGGTCCTGTTCAACGACGGGAAGAAGCTGTGGA
AGCGCTTCGACAAGATCATGCGCGAGATGAAGAAGACGTACAACAAAGTG
TGGGACAGTCTGGTGGAAGGACAACCTGGAGAGAACCTGCCGTCGGGCGA
GCAAGAAGGAGATGCCCTCGACTACCTTCTGAACGGGGTATACCACCTCA
GCACCGGGAACGCTGAGGACCCCATCGAGTTGGAAGACATCGACGACGAT
CTAGACAACGATGCGGACGACGGGGGAGCGGCGGGCTTGCAGGACAACGG
TCGCAACGATGGGGAGTCGCCACCGGGGCAGGTCGAGGACGGCGGTGGGG
CGGAGGAGAGCGAAGGTGGTGCACCGGCGGTGGGGGGAATCAAGGAGGAG
CCAGCCGTCGGCAACCAGGGCAGCGGGGATGGCGCCCCCTCCGATAATAT
CGAAGAAGCAGACGGCGGGTATCCTGACAGGCCCGACAAGTGGATGCACC
CGTATCTCCTCACCTACTGCCTTATCGGAAGGCCAAGCAGCAGCGAGGAC
CCTGACCTCAGGACCACGCGGAAAACGTCCGGGCCGAAGGGTCGCGGAGG
GAAGCAGAAGTCGAAGAGGGGGTCGCCCGGCACCAGCGACGAAAGCGGGT
CGGAGACAAGCGGTGCGTACACCGATGTAGATTTGTCGTCGAACGCGATT
CGGATGTTCGCAGGGGCCGGCGAAAGTCGAAGCCGAGCGCAGGTGAAAAA
AGAGCATGAAGCGGTGGCGGCGGCGAACGCGCAAGAGCAGGCGCGCCGCG
TCCAGCAGACCCATACAGGGAAGCTGGTGACGGCTGTGGAAGCTTGGTCG
GCAGCCGTTGTGTCGAGGCAGGCGTTGGACGAAGAAGCCGCCCATAGGTC
TCACTGGGATTACGCTCGCTTGGCCAAGAAAGCTAAAATCGACGACCTCA
GGGGGGAAGTTGGAGTTCACACTGGAAGGGCCGAGGGCGATGGCACTGCG
AGCCTCTATATCGGCCTTGTATGACATGGATGACGCCGACTTGCCCAAAC
CCATGTCGAAGCTGACGCCACCCTCTGCAGGCGGTACCCCCAGTACGTCC
GCGTCTGCGTCGGTGTCATCTGCAGCGGCAAGTCGTGCCACTACTCCTGG
GGTCACTGCCCTCCCTTTTTCCATTTCGACATCGCCTGTTGCTTCAACGG
CCGCATCTGCGGTCGGGCCCGTGTCTTCATCGCCTGATACGGCAACGCCC
ACTTCCAGTGCCCCATCGTTTTGGGCGCAACACGATCCAGGACAAGGTCT
GCTGGCCTACCGGGATTTGCCGGGGCGCGGAAGAGGGGTGCTGTTCGTGA
GGGAGGGGAAGAAAGGAGAGTTTAAAACACGAGTCCCCTGAGAGGAGACA
CTGCCTCTCTTGTTTTAGGTATTGTTTATTGCGAGCTGGTATGCGTACGT
GTTTTCAGTTTTAGCAATGTCTTGCTGTGTGGCATGTACGGGGCACCCCC
TCCCCGCCCCCTTCTCCCTTCGTCTCTGTCCCCTGTACCCACGTTTATTT
TTGGTTGTGCCATCCAACCTATTATCTTTGGCCGTGTTTTTCTTGTACAG
TGGGGGCTACGGTTTAAGAGAGCTCAGTTTAAGAGAATTGCCGGTTGAAG
AGAGGTCAAAATAGCCAGACACACATCTTAAATCGAACCCCGATTCTCTT
AAACCGAACCTGCCCCCCCCCCACCCCCCCCACCTGTAGCCCATCAGCTG
CCCCCCAACACTGCAGCTACAGTAGTGTCATCACATACATACATAGCTAG
CGAGACAAACGGCTCCCACGGATGCCTTGCCCCGCGGGGTCTCGCTGCGT
GGCAACGCCGGACCACACACCGGCCCCCCCACAGTTTACGAACCACACAT
GCCGTGTCTGCGGAGGCTACCTTCATGGACTGTGCGGTGTGCCTGACCCG
CTTAGCGACAACGAGATGCACCGTGTTTGCCACGGATGCGTCAACTCGAA
CAACCGCAAGGAATCAAGCACAGACTCGACTGCTGGGGCTGCATCTTCGA
AGCGTCCCTGCGCGGGCGGGCGGGCAACGGGGAAGGCGAAGCAAGCGGGT
GCACTGGGCAGCTTGAATCCCGTTGGAAACACTGCACCTAGGAAAGTTCG
TGGCGCCGAAAACCGCAAAAGACCGACGCTTGACCAAAAGGTTCGAGCGC
TCGACCTTTTGAAGAGCATGAGCGGCGAAGAAGACAACTCTCGATGAAGA
CCTTGGCGAGGCACTTAAGGGTCTGGGGTTGGCACCTGGCGCAACGCCAA
CCCAGGCTTCCATGGAAGCCGTGCAGACATGGTTGGGTGTAGAGGAGAAA
GCGGACGTGGCGGAGGCCATTATTGCAGATCTGAAGGACGATCTTTGTGA
GGAGTCGCTTGCCTAAATAAACTTAGACCAACTGAACCTAGACTCGGACG
ACGACGAGGCCGACTCTTCGTCGGGAGACGAGGGCCAGTGTAC
back to top

protein sequence of Ec-00_003730.1

>Ec-00_003730.1 ID=Ec-00_003730.1|Name=Ec-00_003730.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=319bp
MREMKKTYNKVWDSLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAE
DPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEG
GAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTY
CLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGA
YTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHT
GKLVTAVEAWSAAVVSRQALDEEAAHRSHWDYARLAKKAKIDDLRGEVGV
HTGRAEGDGTASLYIGLV*
back to top

mRNA from alignment at chr_00:4041256..4054058+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003730.1 ID=Ec-00_003730.1|Name=Ec-00_003730.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12803bp|location=Sequence derived from alignment at chr_00:4041256..4054058+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGGACAGCAGCAGCCGCCTAACGCAGTAGCGGCGGCAGTTTAGAAAGACG GGACGGGACACGGCGCAAGCATTGGGGAAGCGACCAGCGCGCGCTCGGGA CCCTGCATATAAAGGTGTGTACTGGTGTCCAACATCCATCGTGTCGGCCG TGTTCCTATCCGCGTCCCGCTACTCTTGTGACCTCACCGCTGCGTGCTAT TACGAGGGGGGAGGGTGCAGTAAGATAAGCGGCGGCAAGCCGGCGTACCG CAGTCTCGCTCGCCACGCCGCTCAGATAGGTACCTTCCCAAACATGGGAT GCGGTTCATCCCAACCGAGATGTACTCTCGCTGAACAAAATTCACCGAGA AAAAAAGAAAGCGCGGGGCCTGTTGTATGGTGGCACGCTGACTTGCGCGG TTGCTGTACGTGCCACGATAGCAGCCATTGTACTGCACGGGGTGGAGGAA CCTTGCGGCATCGGACATAACCAATCGACCCGCGGCAGTAGGGCATGATG CTGTCAAGATTAGGCACATGATGCAGGTGCCTTGTTTTCTGTTTCCCCCG GCTTACTCGGGACTACTTGCCAGACAACCTTGTCTGTGCCGCGCACAGAC GGGCAATGTAGCTGAAGGCATCGACGACAATATGCTCACGTAAGCTATCG TCTCTACGGATGGTATTGACAAGTCCCCACTGATGGTATTGACAAGTCCC ACGGTATACAAAGCGGCTGCATACGTAATCGGAAAGTGCATACAACAGCA TTCACGGGAACGGATAAAAGCAAAAACCACATGCATGCGAGAGAAAGACT CAAAGAAAATGACTGAAAATCAGAGAAGACGGGAAAAAAACGAGGCAGAG AACTACGTGTTGTATCCAGAAGGAAAAAAGAAGATGAAAAGAAGAAGAAG ATGACACGAGAGATTCGATCCTGTGATGGCTTGTTGTTGTTGTTGTTGTT GTTGTTGTCTTCACTTTAAACACCGTTCCGATCTCTCTCTACCCAGTACC TTCGTATGTCCGTACTGATCCAACACTTGACGCGGTCGATTCCCGTGGTC ACAGGTAAACTTACCCCAAAAAAGGTACACTCAAATAAACTGGCCCCGAA GGGTGCGCAAGTCAATAGAAATCAACGACAGATATTCTGGAATCCTCCAC TCCCTCTGCGCGCTATGCGAGGTATCAGCTGAGACTAGCAGTCACTATCT ATCATGGGCCGGAGAAAGAGGCACACCCCCTTGGTTCGATCTTGGTACTT CACAACGCAAGCAGAGATCAGGCCATCTGGCACAGAAAAAGAGAGAAAAA AAGAGAAAAAAGAGAAACAAGAGAGAAAAAAGAGAAAAAATAAAAATGGA AACCGTAAGGCCACTTGTTAAGCTGTCCTTTTTTGGGCTGTCCCTTTTCT CAAAAAGGGACGAACCAAAAAATAATCTAGCAAAAAGATGACCCACTTGT TACCGTGCTGGCCGATCCTTTTTGCTCATCCGCCAAAAAAAATGACCCTG CAACAAGTGCAACGGCCGTTCGTCACACATTAAGTACCTTGGCACCGAGC GAGTTGGTTTTTCGGTGATATCTCCGCACAGAGCGAAGCATCAGCAACTG TAAAGCTATCCCCCGCGAGCTGGGTGCTTGGTCCGCCTTGTGTGGCGGCT GATCGAGACCACAGGGCAGTGGGAGGCACGGCAACTGAGATGGCGAGAGT CAACAGCACCTTGAAAAACCCCACCGCGCCAACAACCAGTTTTTTTGCTC TTTTTTGCCCATGCCGCAACTTTGGTTCTTGGATGCTCCCTCACCACACA CTGAAACAACAGCGATGACAAAGGTATCTGCCACGAGCTATGTGTATGGT CCGTCTTGTGTGGTGGTTGATACAGACCAGGAGGCTGACGGGCGGTCAGA GGTTGTGAGCGCGAGAGTGGTGGACAAGCGAGAAAAATGACCCGCCGCGT CTCCAAGCATATTTTTTGATATTTTTCCCGTGTTGCAACTTTGGTTCATC GATGCTCCCTCGTCACACACCGAAGCAACAGCGATGACAAAGGTATCCGC CATGAGCTGTGCGTCTGATTCGTCTTGTGTGATGATTGATACAGACCAGG ACGCTATAGGTCGCCCAGAAGTTGGGTTCGCAAAAGCTGACTGTGCACTA AAAAGACCCACCGCTGGTGCGTCCAGGCTCTTTCGGCTCGTTTGCCGCTT GTTTGCCGCACACATCGGGTTGTCCACCTGGTCAGCCGAATGACAACATT ACGTCTATCGCCGAGGCTACTGACTCCGTACCAGTCACATGACACGACTC GTGCGAATACCGTTAGAGTTTGCGGGGATCATCCGTCGAGATAGTCAAGT TTGTGGGCAAGTGTCATGTGTTGTGACAGAAAAAGGACAACAAAAAAGGA CCGTCCCATCCTGTCACAAAGTTGCCCAAAAAGGGACAGGATGGGGCGAT CTTTTTTCGCTGTCCCTTTTCGGGAGGTTCAAAAATGCAAAAAAAGACCA CGTAACAAGTGGTTCTTTGGGCAGTTGTCCCTTTTTGAGAAAAAGACAGC CCAAAAAAGGACAGCTAAAAGGCCATTTCTTGCGGTTCTTTTTTCGCAGA TCTTTTTTCCCCCCTTCCGGACAACCCAGAAAGGGATCTACAAAAAAGAT GACCCCCTTCTTACGGTGTTTGTCGATCCTTTTTCACCGACCAAAAAAAA ACAGACTCTGCAACGGCTGCTGTCACACATACATGTACCTTCCCACCGAA ATGGTTTTTCGGTGATATCTCCTCACAGAGTGAAGCAGCGCCTACTGTAA GGCTATCCCTCGCGAGCTGTGTGTATGGTCCGTCTTGGGTGGCGGCTGAC AGAGACCACAGGGCGATAGGAGGCACGGGAATGGAGGTGCCGAGAGTCGA CAGCACGCTGACAAAATGCCCACCGCGCCAGCAACCATTTTTTTTGCTCT TGTGCCCCTGTCAAAACTTTGGTTTACCGGTACTCCCTCGCCATCCACTC TAGCAACAGCGATGACAAAGGTATGCGCCACGAGCTGTGTGTATGGTCCG TCTTGTGTTGTGGCTGACACAGACCAGGAGGCTATAGGACGTTCAGAAAT TGTGAGCGCGAGAGTGGTGGACAAGCGGGAAAAATGACCCGCCGCATCTT CAAGCAACATTTTTCGCTCTTTTGCCCGTGTCGCAACTTTGGTTTGCCAG TACTCCCTCGCCACCCACTCAAGCAACAGCGACGATATAGGCATGCGCCA CGAGCTGTGCGTATGGTTCGTCTTGTGTGATGATTGATACAGACCAGGAG GCTATAGGACGCCCAAAAGTTGGGTTCGCAAGGTTGACAGTACACGAAAA ATGACCCACCGCTGCTGCGTCCAGGCTTTCTCGGTTTGTTTGCCTCTTGT TTGCCGCACACATCGGGTTGTCCACCTGGTCCAGCTCATTGAAAAAACAT TGGCTACCGCCGGTGCCACCGACTCTGTACCAGCCAGCAACATGACACAA CTCGTGTGACCGCCATTAGAGTTTGCGGTGGGCCGTCGAGAGATTCAAGT TTCTAGGTACGAGTGATGTGGTTGTGACCAAAAAAAGACAACAGTTTTGG ACAGCCTCCACTTGTCCAAAACTGCCCCCAAAAAAGACAGGATGGGCTGT CCAAAACGGGTTGTCTTTTTGTGGCGATATTTTTATGAGGAAAAAAGACA TTGTAAGAAGACCTTCTACGGCCAATTGTCTTTTTTTGAGAAGGACAAAA GAAAAAAATCATAAAAAAAGACAACCGCAAGAAATGGCCTAGGGCCTTAA TAAGCTGTGTTTTTTTGGGCTGTCTTTTTCTCAAAAAGGGACAACTGCCC AAAGAACCACTTGTTAGGCCACTTGTCCAGCTGTGTTTTTTTGGGCTGTC CCTTTTCTCAAAAAGAGACGACCCAAAAAAAGATCTGGAAAAACGACAAC CCACTTCTTACGCTGTCTTTTTCCAAAAGCGAGGTGTTCGATGATTCTCG GAGGCGTTTGGCGTGCGCGCGCGAACGAATTTTGAATTCTTGCATTTCGG CCGCTTCTCTCGCGCGCACGCACACAAGCTATCTCAGCACACCACGCGCA CCCACATCACACACACATACCACGAGCCACCGCGTACCATGGATGTAATG AAACTAGACAACGTCCAGCCTCTCCCGCTGGACTACAATGGGTATGTCGA GGGCACGTTAGAGTTGCTCCTGGGCGGCAAAGGCCTCTCCACCATCAAGC TTCTCAAGCACCTCCAGACGTGTGCATCGTGTACGCTTGCTTGGCGGTCA AGCGGAACGCCGGGATCGTCAGCACGGAGGCGAAGTACCAGGCAGCGGCG AATGGGTACAAGGACATCGCTGTCCCAGGTTTCTTCAAGTGTCTTCAACG TGAGACTCAACGTGAGACACAGCCAACCGTAGCGACAGAGAGAGGCGGGT TTCGAATGCGTATCCGACCGTCTGCGGCGCCATGGTCTGCTCTTGAACAC GATATGCGCAACGCCGGATGCAGGGTGGCGCTGTGTTTGGTCCGCTCAGC GCCCAACACCATGTTTTCAAAGTTGTCCTGTTGTTGACAGGACAGACAGG CCATCAGGGTGCGCTGCCTCGACACCGATGCATCAACCAAGCAGCAACCA CATAATAGGCTTTTCAACAGAACTCTACTCGGCTGTGCGTAGTTTGGTGA GCCCCAGGTGTATGCTAATAAAGCACGCCCGGCTTTGTGCAGCTATCGGC TAAAAATGACGACTGACAGCGATGGGCATCCTCCTGCAACGTCGGTGTCA CCAGGAAATGTTGCCGTTTGCTAGGCGCTCATGTGGCATAAGGAAACAAA CAGTTCGATTCATGTGCTAATGTCATGTCTGCTTTAGTGCTGTACAGGGG ATGCTGTACTGGGGATGCAAAGGTCTGTGCTGCTACTGCTGACAGTGACG TGCTACTGCTGTTCCACTGTTTGTTGTTCGACTTGCCCCGCAGCGTCGGT CCTGTTCAACGACGGGAAGAAGCTGTGGAAGCGCTTCGACAAGATCATGC GCGAGATGAAGAAGACGTACAACAAAGTGTGGGACAGGTGTGTAGATTTT TTGTTGTACTGTTTTGCTCCTCAACAGTGGTTGAGGCTCAATACAGCTTT TGCTCTAACACATCTACCGTAGCGTGTTGTGTATGCTCCTGAATCAGCCG TAAACGGCACGCCCACACTCGGAACGGACGCTGATTGGTGGCGGTGTTTC TGCTGCAGCTGATGTAGAGGCAGCAGCTCATGTCGTGTCGAAGGATAGGC CTGCACGTGTCGAAGGGTAGGCCTGCACAAATGCTGTAAAACCGGAGGTA GACGAGAGACGCGTTGGCGCACACGTGGTGGATGTGTGCAAGTTAGCATG TCCTCTTGATCGGTTGTGCTCATGAGTCGTGTGTGTGTTGGAGATTTAAT CTTCCAGCAGTCGTATTGAGTAGAGACAAGCAAGAGAGGGCACACGGCAT GCTCCTACACAACATATGGGTCATGTATGTACTGCTGAATACGTCTCCAT ACTTTTGTGCGAGTGTCTAGTTCGCCACCGGCCTTCGCTGCCATTGTGGT CCTTCATCACACGCTTTTTTGTTTTGGCTAGGTGTTTGGGTGCGGTAGCC CGTCAGAGGCCGAAAGAGAAAGAAGGTTGACTCAAGACCTTGGTTGATTA GAGGTGAGCAACATGCGGTAGGCAACACCATCGCCATGCAGCATGCCCAT CAACACATTTCATCCGCGTACCCCCCGGAGACCCCGTAGACAGTATACTC TGCCGAGCACCCCAAACAGCCCCCCTGCTCGGTACGAGATACGATCTACG AAATCCTCGTCACGACTATCATTGCCAGCTAAAACGGCGATAAATCAATG TACGCATCCAAACGGAAATAATCTACCATTCATTCCAATTCAAACAATTT CCCAATAGAACAATGTTCTACGAAATCTGTCGATCTCCCAATAAAACATG CTCTACGAAATATTTCAAATCTTCTGATGATATCAAATTACTATCTCCTA CAAGGTCTGTCAATAAACAATTCACCCTCTTGAGAAAAATTCTTTACCAA ATTCTCAAGAAGTCAAAAAACAAACAAATACCCTTGGAAAAATACCCAGC AAAGATACACATTACATCAGAATCACGTCAGAACGGGGACGGGTAACTCC GGGAAAATGTGTCCAACGTCCTGACTTACTCAGAACAAATTCCGCAGATA AACATTCATGCTTCAACTCATTGACCAGCTCAAATAACCTTCGGAAGCAC AAAGGCTTCAACCATGACTTACGAGAACATGCCAAATCCTTCCTCCAATA CCCAATACCTTGACAAACATACCAGTCCAACAGCCCCCCTGCTGTAACAT CCAACCCAAACACGAAGAAACCAAACAAACAAGTCCGAAACAACCATGAA GAAACCAACAAAATCCAAAACAGACAATCAACAATCCCGCATCCCCCCTG CTGGGACACGTCATATAAACGCAACGAAAATCCCATTCAATATTCAATTT CATGTCACCTCCGCAGGTAAAACGCGGAAAACGATCCAGACATGAACTAC CCAAATCCCATCAGCCAACATCAATTCCATATAAAATCCCCAGGGAAAAC AAGGAAAATCTCAACATGAACTGCCACCCGGTGTCAGAAAAACTGCTTGT TGTGCTGCGGCGGACAGCATGGTATCACATTAGAAACACTGCTTATTGTG CTGCGGCGGACAGCATGGTATCACATCCCCCCCCCCATGATTTCCGACAG CAGCGCAACAATCAGGCGTGATTCCGCAAAATCCAGCATGCCATTTCTGC ATCCAACTTCATCAACTCCAAACCGAAACAAGAAAAAAAAACATATCATC AAAGAAAAGGCGTCACACGTCCAGCACATACCAGTCTGCCGTACAGGCCT ACTTGGGAAGGAAAATTGCTACTCCGCAAGGATTGGCTCGCCGGGTACGG TACATCGGAGGGACAGAGAAACGGTGCGTGCCCCCCGACGTCTTTACCCA GCACGTCGCACGCCAAGCCAACGCCTACTTACATATATCCAGTACCATCA GAAAAACATAGTGGTAACTACCATAGAGAATGTTATCCCAACAAAGAAGG AAAAACCAAAGTGGAACAAACCGTACGCAGAAACTATACTACCACCGCCA TTTGAGATATTTTCCTGGCAAACAACAGCCCCCCGGCCGCAACATTCCAT TTGCCTCCCAGAAAAACAATAATCTACCATGGAGATTCCCTGCCAGTTGG CCGTGGAAATTAGTGTCCCTGCAAAGTAAAACGCGGGTGGGCATCTCTAC AGAACAAAACAAAAACAAATCCAAACCTGCAAATGTGCCAACGATAGGAA AAATGATTTGCAGACGGTGAAAAATGCAGCATTGTATGTGAAGATCAAAA CACAAGAACAACATCCTGCACAAAACAAATTTCAGAAAAATGACAAGAAT ACGCAAACAAACATCACGTGGCTTGCCGAGTTTAAGACCCCAGCAGAAGT CGCGCTGCTTGCCGTCATTGTTGGACTCGCCCGGTCCTCCGAACTCCCTT CCCCGCTTCATGATCCTCCTGTCGTTGCTCCGGTCGCGAACACGCGCTCC CCGGCCGTTGCCCACCCGACATCTTTCCACGGTCGAACGGGGTGTCCATC CCCATCACCAGCCCCACTCTCCCAGCCTTCAGACGGCACAGCTTCCCCGG CTCGAAGGGGCGCAGCAGTGCCCCAGACCAGGCCACATCCATCCCCTCTG CCTCGTCGTTGCCACTGCTGCCGATGTTGCTGCCGCTACTGCTGCTGGAG CCATCGACCAGGTCGTCCACCCCGGGATAGTTGGCGCCGCGCACCCCCGA ACACACGGTGCCGGGATCGAAAGGGTGCGTGGACGCCCCCCTCTCGCCAC AGACGCTGTCATCCCAGCAGCCATCAACCTCACCTGCGCACCAACCGCCA TCATCGCTGCCGTCGTCGATGCCGTTGACCACCGCTTCTCCGTTGCTGGC CGCCCCCCCAACCGATATGGTGGGGGAAACGTTACCGACGGTCGCCATCG TAGCGGCCGGTGCCGTCGCCGCGGTCGCGGGTGATGCCGTCACTGATGTC GCCACTCCAGCCGCCGATGCCGCCACTGTAGCCACCTGCGCGGGCTCTCG AGCCATTCTCCCCGCCGCCGCAGCGGGAGAAACAACACCGTCGGGTGCCG CCGCCGTCGCCGCTGGAACCGCCGTCGATACCGACACTCCAACCACCAAC GGGGGCGCTCCGGTCGTTCTCCCCGCCACCGTCGCGGAGATAACAGTGTC GCCGGGCACCGCCGCCGTCGCCGCTGGAACCGCCGCCGATGCCGCTACTC CACCTGCCGCCGCGAGCCCTCCGGGCGCTTCCTCCGCCGTCGCAGCGAGG GAAACACTACCGCCGTCGTAAGTCGCCACCGTCGCCTCTGGAGCTGCCGC CGATGCCGCCGCTCCTGCCACCACTGCAGGGACCCCGGCAATTCCCCCCG CCGCCGTCGCGGCGACAACACTACCGCCGCCGTAGGTCGCCGCCGTCGCC GCTGGAGCTGCCGCCGATGCCGCCGCTCGTGCTGCCACCGCGGGGACTCG GATCATCCCCCCTGCCGCCGTCGCGGGGAAAACACTGCCGCCAGAGGTCA CCGCCGTTGCCGCTGGAGCTGCTGCCGATGCCGCCGCTCCTCCCGCCACC GCGGGGACTCCGGCCGTTCCCCCAGCCGCCGTCGCGGGGAAAACACTGCC GCCAGAGGTCGCCGCCGTCGCCGCCGGAGCTGCTGCCGATGCCGCTGCTC CTGCCGCCACCGCGGGGACCCCGGCCGTTCCCCCCGCCGCCGCCGCGGGG AAAACATCATCGCAGACACTGCCACCAGCGTGAACTATGTCCACAGAATC ATTCCATCCGAACCATCCGTCATCATCACCCACCACAGCACCGCCAGCGT GAACCATGTCGACGAAATCAGAGCGGTACTCGCTCTCTGCCATCACTTCG CCGCCAACGTGAACCAGGTCGACAAAATCAGAGCGGTACTCGCGCTCTAC CACCACCTGCTGCTGTACGACCGAGCTTCCACCGATGTCCATGCAGCTGC CGCCGCCATTGACGCCCATCCAGCAGCCACCGCGGACGATACGGCCGTCA TCCTCGCCGCTGCTGCCATGAAGATGCACGGCGCAGTTCCCCCACATATG GCCGTACTGACCACAGGCGCCGCACGTACCCTCGAACCTGCGGGGTGCGG TGCATTCTTCGCCGTGGTGGCCGTTCCTGCCGCACCGAGTGCAATGGTAT ACCGCACCAGGCGGAGGGGGTGATTCCTGCTGGAAATTCACGGCGTTGCT CCCGCAGTCATATATCCCACCAACTCCGGTTGGCGGCAGCTGCTGTTGCT GCCGCGCCAACTGCTGGTGCTGCCGCGCCTGGTGGCTCTGAGTGAAAACG CAGTGTTGGTTCTGCTGACGGACAAAACCACCACGAGAACACTGCTGTAC CTGCGATGGCTGCTGCTGCCATTGAGCACTCCATCGCTGCTGCTGTTGTT GTTGTTGTTGCTGCCGCCTAAGTCTCTCCTTCTCATACTCGGCAGCCTCC GCAGCTCTGAGCACCTTCACCAGCATCTCCACCTCCGACTCGGCAGCTCG TAGCTTCTCTGCTGCGTTGCGCGACCTCTCCTCCATCTTGATGCGCACAA CTGTAGTCTCCTCCTTTTGCGAATCTCTTCCTATTCCGCCGCTTCTCTCC GCCATAGCCTACACTTGAAAAATATCCTGTACCCTGCTGTCCCAGCCCTG AAGCGCTGTCCCAGCAATACACCCCCTGCTGTCCCGGTCCCCGATGGCCA CCGTCCCAGCTATACACTACCCGCTGCCGTGCTGTCCCGTCCCCGTTGGC CACGTCCCAGCTTAGCTATGTATATCGTATTCACCGCCCCATCGGCCCGG CACATACAGCTCAGACGCCAATACCCACTACCAACACCAGGCCATACAAT ATATTGTGTTTGGATGCGGTAGCCCGTCAGAGGCCGAAAGAGAAAGAAGG TTGACTCAAGACCTTGGTCGATTAGAGAGTGAGCGACATGCGGTAGGCAA CACCATCACTCAAAACGCACTAGTGTACTGCAGGAAAACAATAGGTAATT CAACCCCAACCCGCAACCCTGTAATTTTCCAGCAATAACCCCAGAATCCT TGGTCATAGCCCCCCTTCATGGCATAGCCCGCCCCCAAATTACTCCACCG ACGTACCACAAAAATATTTGCGTATTCCCCGCTTACCGTTTGCTCTGTCC TCTGTAACCTCACCCCTTCTTGCAACCCCAACCCTCCCCCTCCCTGCTCC GGTGCGCCCCTTTCCCAGTCTGGTGGAAGGACAACCTGGAGAGAACCTGC CGTCGGGCGAGCAAGAAGGAGATGCCCTCGACTACCTTCTGAACGGGGTA TACCACCTCAGCACCGGGAACGCTGAGGACCCCATCGAGTTGGAAGACAT CGACGACGATCTAGACAACGATGCGGACGACGGGGGAGCGGCGGGCTTGC AGGACAACGGTCGCAACGATGGGGAGTCGCCACCGGGGCAGGTCGAGGAC GGCGGTGGGGCGGAGGAGAGCGAAGGTGGTGCACCGGCGGTGGGGGGAAT CAAGGAGGAGCCAGCCGTCGGCAACCAGGGCAGCGGGGATGGCGCCCCCT CCGATAATATCGAAGAAGCAGACGGCGGGTATCCTGACAGGCCCGACAAG TGGATGCACCCGTATCTCCTCACCTACTGCCTTATCGGAAGGCCAAGCAG CAGCGAGGACCCTGACCTCAGGACCACGCGGAAAACGTCCGGGCCGAAGG GTCGCGGAGGGAAGCAGAAGTCGAAGAGGGGGTCGCCCGGCACCAGCGAC GAAAGCGGGTCGGAGACAAGCGGTGCGTACACCGATGTAGATTTGTCGTC GAACGCGATTCGGATGTTCGCAGGGGCCGGCGAAAGTCGAAGCCGAGCGC AGGTGAAAAAAGAGCATGAAGCGGTGGCGGCGGCGAACGCGCAAGAGCAG GCGCGCCGCGTCCAGCAGACCCATACAGGGAAGCTGGTGACGGCTGTGGA AGCTTGGTCGGCAGCCGTTGTGTCGAGGCAGGCGTTGGACGAAGAAGCCG CCCATAGGTCTCACTGGGATTACGCTCGCTTGGCCAAGAAAGCTAAAATC GACGACCTCAGGGGGGAAGTTGGAGTTCACACTGGAAGGGCCGAGGGCGA TGGCACTGCGAGCCTCTATATCGGCCTTGTATGACATGGATGACGCCGAC TTGCCCAAACCCATGTCGAAGCTGACGCCACCCTCTGCAGGCGGTACCCC CAGTACGTCCGCGTCTGCGTCGGTGTCATCTGCAGCGGCAAGTCGTGCCA CTACTCCTGGGGTCACTGCCCTCCCTTTTTCCATTTCGACATCGCCTGTT GCTTCAACGGCCGCATCTGCGGTCGGGCCCGTGTCTTCATCGCCTGATAC GGCAACGCCCACTTCCAGTGCCCCATCGTTTTGGGCGCAACACGATCCAG GACAAGGTCTGCTGGCCTACCGGGATTTGCCGGGGCGCGGAAGAGGGGTG CTGTTCGTGAGGGAGGGGAAGAAAGGAGAGTTTAAAACACGAGTCCCCTG AGAGGAGACACTGCCTCTCTTGTTTTAGGTATTGTTTATTGCGAGCTGGT ATGCGTACGTGTTTTCAGTTTTAGCAATGTCTTGCTGTGTGGCATGTACG GGGCACCCCCTCCCCGCCCCCTTCTCCCTTCGTCTCTGTCCCCTGTACCC ACGTTTATTTTTGGTTGTGCCATCCAACCTATTATCTTTGGCCGTGTTTT TCTTGTACAGTGGGGGCTACGGTTTAAGAGAGCTCAGTTTAAGAGAATTG CCGGTTGAAGAGAGGTCAAAATAGCCAGACACACATCTTAAATCGAACCC CGATTCTCTTAAACCGAACCTGCCCCCCCCCCACCCCCCCCACCTGTAGC CCATCAGCTGCCCCCCAACACTGCAGCTACAGTAGTGTCATCACATACAT ACATAGCTAGCGAGACAAACGGCTCCCACGGATGCCTTGCCCCGCGGGGT CTCGCTGCGTGGCAACGCCGGACCACACACCGGCCCCCCCACAGTTTACG AACCACACATGCCGTGTCTGCGGAGGCTACCTTCATGGACTGTGCGGTGT GCCTGACCCGCTTAGCGACAACGAGATGCACCGTGTTTGCCACGGATGCG TCAACTCGAACAACCGCAAGGAATCAAGCACAGACTCGACTGCTGGGGCT GCATCTTCGAAGCGTCCCTGCGCGGGCGGGCGGGCAACGGGGAAGGCGAA GCAAGCGGGTGCACTGGGCAGCTTGAATCCCGTTGGAAACACTGCACCTA GGAAAGTTCGTGGCGCCGAAAACCGCAAAAGACCGACGCTTGACCAAAAG GTTCGAGCGCTCGACCTTTTGAAGAGCATGAGCGGCGAAGAAGACAACTC TCGATGAAGACCTTGGCGAGGCACTTAAGGGTCTGGGGTTGGCACCTGGC GCAACGCCAACCCAGGCTTCCATGGAAGCCGTGCAGACATGGTTGGGTGT AGAGGAGAAAGCGGACGTGGCGGAGGCCATTATTGCAGATCTGAAGGACG ATCTTTGTGAGGAGTCGCTTGCCTAAATAAACTTAGACCAACTGAACCTA GACTCGGACGACGACGAGGCCGACTCTTCGTCGGGAGACGAGGGCCAGTG TAC
back to top

Coding sequence (CDS) from alignment at chr_00:4041256..4054058+

>Ec-00_003730.1 ID=Ec-00_003730.1|Name=Ec-00_003730.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=957bp|location=Sequence derived from alignment at chr_00:4041256..4054058+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGCGAGATGAAGAAGACGTACAACAAAGTGTGGGACAGTCTGGTGGA
AGGACAACCTGGAGAGAACCTGCCGTCGGGCGAGCAAGAAGGAGATGCCC
TCGACTACCTTCTGAACGGGGTATACCACCTCAGCACCGGGAACGCTGAG
GACCCCATCGAGTTGGAAGACATCGACGACGATCTAGACAACGATGCGGA
CGACGGGGGAGCGGCGGGCTTGCAGGACAACGGTCGCAACGATGGGGAGT
CGCCACCGGGGCAGGTCGAGGACGGCGGTGGGGCGGAGGAGAGCGAAGGT
GGTGCACCGGCGGTGGGGGGAATCAAGGAGGAGCCAGCCGTCGGCAACCA
GGGCAGCGGGGATGGCGCCCCCTCCGATAATATCGAAGAAGCAGACGGCG
GGTATCCTGACAGGCCCGACAAGTGGATGCACCCGTATCTCCTCACCTAC
TGCCTTATCGGAAGGCCAAGCAGCAGCGAGGACCCTGACCTCAGGACCAC
GCGGAAAACGTCCGGGCCGAAGGGTCGCGGAGGGAAGCAGAAGTCGAAGA
GGGGGTCGCCCGGCACCAGCGACGAAAGCGGGTCGGAGACAAGCGGTGCG
TACACCGATGTAGATTTGTCGTCGAACGCGATTCGGATGTTCGCAGGGGC
CGGCGAAAGTCGAAGCCGAGCGCAGGTGAAAAAAGAGCATGAAGCGGTGG
CGGCGGCGAACGCGCAAGAGCAGGCGCGCCGCGTCCAGCAGACCCATACA
GGGAAGCTGGTGACGGCTGTGGAAGCTTGGTCGGCAGCCGTTGTGTCGAG
GCAGGCGTTGGACGAAGAAGCCGCCCATAGGTCTCACTGGGATTACGCTC
GCTTGGCCAAGAAAGCTAAAATCGACGACCTCAGGGGGGAAGTTGGAGTT
CACACTGGAAGGGCCGAGGGCGATGGCACTGCGAGCCTCTATATCGGCCT
TGTATGA
back to top
Synonyms
The feature 'Ec-00_003730.1' has the following synonyms
Synonym
Esi0235_0047
Esi_0235_0047