Ec-00_003690.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_003690.1
Unique Name	Ec-00_003690.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	270

Homology

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BLAST of Ec-00_003690.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 2.820e-77
Identity = 184/460 (40.00%), Postives = 185/460 (40.22%), Query Frame = 1

Query: 1567 AFSRERLEEQATLAPVRMWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDVRLPTESGKQFNSSTNLFGFTSEYNNERAGQQHVKTGFEHLQGRPDVCPRERVMDGREAFFMSGRKMVWLLSRYRAGSRCGTLWWPTFIEQAGVVQELAFDGHKPEHVCLCVFSVLQSGR*DSLADNHEHFARILEYPVRT*YVLWECAVNAAHHCIILSLGRPADIGKARKENDGITAPRISCSVIVKTRK*ICSSFAPEPFPRVGFLVSFIARRTRRNKNLGKTTNPYFWCSSCVTSSFGCADNHEDLQACMNNVKMRGCEAVYFQGSFGGEEYCSTPRHRLPADEEEPGLLVAGSTSPLETKRARSLVFHFRSGDVFKPRKDFHFQTYGQ 2946
            +FSRERLEEQATLAPVRMWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQV                                                                                                                                                                                                                                                                                   DNHEDLQACMNNVKMRGCEAVYFQGSFGGEEYCSTPRHRLPADEEEPGLLVAGSTSPLETKRARSLVFHFRSGDVFKPRKDFHFQTYGQ
Sbjct:    3 SFSRERLEEQATLAPVRMWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNHEDLQACMNNVKMRGCEAVYFQGSFGGEEYCSTPRHRLPADEEEPGLLVAGSTSPLETKRARSLVFHFRSGDVFKPRKDFHFQTYGQ 187

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BLAST of Ec-00_003690.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.610e-58
Identity = 110/178 (61.80%), Postives = 136/178 (76.40%), Query Frame = 1

Query: 1618 MWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDVRLPTESGKQFNSSTNLFGFTSEYNNERAGQQHVK----TGFEHLQGRPDVCPRERVMDGREAFFMSG 2139
            MWA++ +++G TM+ + T GTGL M S   + GVI VR GVVVQD+GCP AISPDEADIR+ST  WPGGVLTL+S+ ++GRSGNHY+AIS++FSMAFCCQVKVLELP  D RLPTESG++F SSTNLF F+  + N RA  Q++     T FE LQGR DVCP ER++DG  A  + G
Sbjct:    1 MWASVRRMVGATMVSMLTAGTGLHMESVTANGGVIDVRHGVVVQDRGCPQAISPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTN-RAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRG 177

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BLAST of Ec-00_003690.1 vs. uniprot
Match: A0A6H5JNM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.760e-41
Identity = 94/184 (51.09%), Postives = 120/184 (65.22%), Query Frame = 1

Query: 1612 VRMWANIWQILGVTMIPIFTVGTG---LSMASRAEDAG--VIAVRDGVVVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDVRLPTESGKQFNSSTNLFGFTSEYNNERAGQQHV---KTGFEHLQGRPDVCPRERVMDGREAFFMSG 2139
            +RM A IW+ L  T+ PI  V +    + +  R E+ G   I +R+G VVQ+ GCP AIS DEA  R S PSWPGGVL +TSL  VGRSGNHY+AIS+MFS+AFCC VKVLELP  D R PTE G +F SS +LF F+S   +    ++      TG E LQGR  VCP++R++DG  A  ++G
Sbjct:    1 MRMLALIWR-LRATLPPILAVSSSAFAVGVDERGEEGGGGAIGIREGFVVQEVGCPQAISHDEALARTSDPSWPGGVLNVTSLETVGRSGNHYMAISTMFSLAFCCGVKVLELPDTDYRFPTEEGGEFKSSKHLFSFSSHGTDGVEAERQTWSQLTGLEDLQGRVGVCPKKRIVDGTHANHITG 183

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BLAST of Ec-00_003690.1 vs. uniprot
Match: D7FHC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC1_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 2.990e-41
Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 1

Query: 1603 LAPVRMWANIWQILGVTMIPIFTVGTG---LSMASRAEDAG--VIAVRDGVVVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDVRLPTESGKQFNSSTNLFGFTSEYNNERAGQQHV---KTGFEHLQGRPDVCPRERVMDGREAFFMSG 2139
            +A +RM A IW++L  T+ PI  VG+    + +  R ++AG   I +R+G VVQ+ GCP AIS DEA  R S  SWPGGVL +TSL  VGRSGNHY+AIS+MFS+A+CC VKVL+LP  D R PTE G +F SS +LF F+S   +    ++      TG E LQGR  +CP+ER++DG  A  ++G
Sbjct:  122 VAGMRMSALIWRLLRATLPPILAVGSSAFAVGLDERGDEAGGGAIGMREGFVVQEVGCPQAISHDEALARTSDHSWPGGVLNVTSLETVGRSGNHYMAISAMFSLAYCCGVKVLQLPDTDYRFPTEEGGEFKSSKHLFTFSSNGTDGVEAERQTWSQLTGLEDLQGRVGICPKERIVDGTHANHITG 308

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BLAST of Ec-00_003690.1 vs. uniprot
Match: D7G2E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E6_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.050e-12
Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = 1

Query: 1618 MWANIWQILGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQ 1749
            MWANIW++LG TM+P+FT GTGL M S  ED GVIAVRDGVVVQ
Sbjct:    2 MWANIWKLLGATMLPMFTAGTGLGMTSTTEDGGVIAVRDGVVVQ 45

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BLAST of Ec-00_003690.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.010e-7
Identity = 53/165 (32.12%), Postives = 75/165 (45.45%), Query Frame = 1

Query: 1642 LGVTMIPIFTVGTGLSMASRAEDAGVIAVRDGV-VVQDKGCPHAISPDEADIRKSTPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDVRLP-TESGKQFNSSTNLFGFTSEYNNERAGQQHVKTGFEHLQGRPDVCPRERVMDGREAFF 2130
            LGVT   +F   TG          G   V  G  + Q  GCP A+S  +A+      +     +TL S +  GRSGNH++ ISS  +M FCC+ ++L LP  D  +P  + G  F +    F F+               GFE L   P+VC R ++ DG +  F
Sbjct:   59 LGVTATHVFVRETG----------GETHVMSGANLFQSAGCPQALSRSQAEAALDGGNSTSNTITLLS-FGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAMPGDDEGGGFKAGERWFDFSRV--------TPPWPGFEQLGDNPEVC-RPQMEDGADNAF 203

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BLAST of Ec-00_003690.1 vs. uniprot
Match: D8LSV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV7_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.600e-5
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 1

Query: 6964 VYGIEWRTTSNAYTVYNKW-DPSVNQLEMIVSDDLKGVQHCC 7086
            VYGIEW+TT N Y+VY++W +    +LEMI SD++K +Q CC
Sbjct:  156 VYGIEWKTTLNEYSVYDEWINTDAQRLEMITSDEVKSIQRCC 197

The following BLAST results are available for this feature:

BLAST of Ec-00_003690.1 vs. uniprot

BLAST of Ec-00_003690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D7FSJ7_ECTSI	2.820e-77	40.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L7B0_9PHAE	1.610e-58	61.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JNM4_9PHAE	2.760e-41	51.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FHC1_ECTSI	2.990e-41	49.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G2E6_ECTSI	1.050e-12	75.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FRV9_ECTSI	1.010e-7	32.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LSV7_ECTSI	2.600e-5	54.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:3942646..3956940 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	7772
Hectar predicted targeting category	other localisation
Gene id	Ec-00_003690.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_003690	Ec-00_003690	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 3942646..3957181 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003690.1	Ec-00_003690.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 3944147..3950674 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003690.1.1	Ec-00_003690.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3942646..3944213 +
Ec-00_003690.1.2	Ec-00_003690.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3946318..3946421 +
Ec-00_003690.1.3	Ec-00_003690.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3946736..3946813 +
Ec-00_003690.1.4	Ec-00_003690.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3947615..3947720 +
Ec-00_003690.1.5	Ec-00_003690.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3948319..3948389 +
Ec-00_003690.1.6	Ec-00_003690.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3950291..3951311 +
Ec-00_003690.1.7	Ec-00_003690.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3951664..3955682 +
Ec-00_003690.1.8	Ec-00_003690.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3956136..3956940 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003690	5UTR:Ec-00_003690.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 3942646..3944146 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003690.1	CDS:Ec-00_003690.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 3944147..3944213 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003690	3UTR:Ec-00_003690.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 3950675..3951311 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:3942646..3956940+
coding sequence from alignment at chr_00:3942646..3956940+

mRNA sequence

>Ec-00_003690.1 ID=Ec-00_003690.1|Name=Ec-00_003690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=270bp
MCRNLVAYAIAPGSRPTQDIAKAFSRERLEEQATLAPVRMWANIWQILGV
TMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQDKGCPHAISPDEADIRK
STPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDV
RLPTESGKQFNSSTNLFGFTSEYNNERAGQQHVKTGFEHLQGRPDVCPRE
RVMDGREAFFMSGRKMVWLLSRYRAGSRCGTLWWPTFIEQAGVVQELAFD
GHKPEHVCLCVFSVLQSGR*

spliced messenger RNA

>Ec-00_003690.1 ID=Ec-00_003690.1|Name=Ec-00_003690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7772bp|location=Sequence derived from alignment at chr_00:3942646..3956940+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGACTGTTACAAAATAAACACCAGGTTGTTCTATCTGCTCTTCGAACAAA
CCTTCTCATTTTTACAATGCGCTCGCTCCAACGACCATCACACAAACTTG
CCAATAATACGATGGGTAGCGGATAGCTCTGACAACGCCCACCAGGTTGA
GAGTCATGGCGTCCACGCTTGCAAGGTAAGAGGGTGAGCAGCTGACGGTA
CCAATTTCGCATCTCACACAAACAAGCACGAACTGCTGTCGCATTCATGA
TTATATTGGCACGTGTTGGGTACGGGTTTCGCAGTCTTCCCATCAAAACA
TAACAAAAACAAAAAAAAACGGTATGCCGAAGGGTGTCGTGTGTGTGAAA
GAGAGAGCAAGTAAACATAACGCATACACACAATGATATATTTGAACGAC
ATGTAAATTTAATGTGTACATGCCAAAATAGAGTGAGGCGACCGCCACGA
CACGACGTGAAAATCACATTATTTTTTCGATGTGGTAATCGATCAGGCTA
TCAGATGCGTTGGGGAGCGAGGCCCTCGTTCTTGAGATGCTGGGGAGCTT
CTCTGGCTGCTGCCTCCCTGCTGTGTACGTGCATGATTGCGGGACGTTGG
ACAACCACACCTGCCCATAACAATTTGAATGTTTGAATATGTTGACCGCA
GGTTCCGCGAGATATCACACCCCGCGTGGTGACCAATTGGTTCAAACGTT
ACCACACAAGTGCTCGTGTGGTGTATCGGGTGTGCTATCGCATTCTACAG
GGACACCTGGATTGAATGTGAATGCATCTAATCCAACCTTTGCAGCATTG
CCCGTGCTGTACTCTGTTGGGCGTTTGTACACCGGAAATGTTTCGGCTGA
TGCTACAGGACCTGAGATTCAACTGTTCCCGGAAATCTACACAAGAGAAA
GCGCCACGAAAAGCGCGCATGAACGCACATGGTCTCACACGGCTGGCCTA
CCCGAAAGGCTTGCCTATCGGCGCACCCTGCGCGGTTTGGTCGTACTATG
ACTTGTGGGCAATAGGTCGCGTTGCACGCTTTCAATGACTAAACTACGAC
CACAATGAACGGACATGATGCCAATGTTTGCTGAACGGACACTGAAATTC
GTTTTTTATTTTTCCGAAATGGGTCGACAAGAAACAAAAGCGGTAAAGAC
ATTTGAGACGGTGAACATATGAAAGGAGAGAAACAGCGCACAACGTCGCA
CAGGGCCGATCACGTTTGTGACGTAGTCACTGCGCTCGGAGGGTGATTAA
ATTTGGCGAGGGACCACGAATAACGATGCCTACCGAGGCATCCTCAAGAT
ACGAGGTATCCTCAAGATATCGTGAGGAGAGCACCGTAGGACGATATCGG
TGTGTTGGTGACAGTCAGCCACACCCTCTGTGTTTCGATTATCGAACTTG
CTCTAGAAGACGAAAAGACAGATGAAGAGTGATGAAGACAGGAAGACGGC
AAACCGGTCAGCGTGAAGACGAGAGACACAACAGCGCGCGCGCATGGTTG
CATGTGCCGCAATCTTGTAGCGTATGCTATTGCGCCCGGAAGTCGACCTA
CTCAAGATATCGCGAAAGCGTTTTCCCGAGAAAGGCTTGAAGAGCAGGCG
ACACTCGCTCCGGTCAGGATGTGGGCAAACATATGGCAAATATTGGGAGT
CACCATGATTCCAATATTTACGGTGGGAACTGGGTTGTCTATGGCAAGCA
GGGCGGAAGACGCAGGCGTGATCGCTGTTCGAGATGGAGTCGTGGTGCAG
GACAAAGGATGCCCGCATGCCATATCACCGGACGAGGCGGACATCAGGAA
GTCTACCCCGTCCTGGCCGGGTGGTGTTTTGACTCTCACTTCCCTCTACC
AAGTAGGACGATCGGGGAATCACTACGTGGCGATATCGAGCATGTTCTCA
ATGGCGTTCTGCTGCCAAGTGAAAGTGCTTGAGCTTCCCGTCAAGGACGT
GCGCTTGCCAACAGAAAGCGGGAAACAGTTCAACTCGTCCACCAACCTCT
TCGGTTTCACGTCAGAATACAACAATGAACGTGCTGGGCAGCAGCACGTG
AAAACGGGTTTCGAACATCTTCAGGGCCGACCTGACGTCTGTCCGCGAGA
GAGGGTCATGGACGGACGGGAGGCGTTCTTCATGAGTGGTAGGAAAATGG
TTTGGTTGCTGTCACGGTATCGGGCAGGGTCTCGCTGTGGAACGCTGTGG
TGGCCAACGTTTATCGAACAGGCAGGGGTTGTTCAAGAGCTAGCATTCGA
TGGACACAAACCTGAACATGTATGTTTGTGTGTTTTTTCCGTTCTCCAGT
CCGGTCGGTAGCGATTCACTTGCAGATAACCACGAACATTTTGCACGGAT
TCTGGAGTACCCGGTACGTACTTAATACGTCCTTTGGGAATGTGCTGTAA
ATGCTGCCCATCATTGTATCATTCTTTCGCTTGGCCGTCCGGCTGACATT
GGTAAGGCCCGAAAAGAAAACGATGGAATAACAGCTCCTAGGATATCATG
CAGTGTCATCGTCAAGACACGGAAATAAATATGCTCATCATTCGCACCCG
AGCCGTTCCCGAGGGTTGGGTTTCTCGTTTCGTTCATTGCTCGGCGTACA
CGCCGAAATAAGAACCTGGGAAAAACCACGAACCCATATTTCTGGTGTTC
CTCGTGCGTGACATCATCGTTTGGTTGTGCAGACAATCACGAAGACCTTC
AGGCATGCATGAACAATGTGAAGATGAGAGGGTGCGAGGCCGTGTACTTC
CAGGGATCGTTTGGGGGAGAAGAATATTGTTCAACACCACGACACCGACT
CCCCGCAGATGAGGAGGAACCCGGTCTATTAGTGGCCGGGTCAACCTCGC
CGCTCGAAACAAAAAGGGCTAGATCACTAGTTTTTCACTTTCGATCCGGG
GATGTTTTCAAGCCGAGAAAGGACTTCCACTTCCAGACGTACGGCCAGCC
ACCTTTGCTTTACGTACTGGCAGTTATCGCCAGCAAGAAGTGGAGCAATT
TGACATTCATTACAAACGGGGAACATGAGAGGCTTCTCAACCCTACGTTC
AGAGTAATTGAAGAGCTCATCAGCCAGGGGATTCTTGGGACAAACGGGAC
GATAGTGGAAACTTATAAGGTGGGTGGGTGTAGGCGACCACGTTGTGCAA
GCACGGAACTTTCTTGTCCCCAAACAAAGTTAGCGGTGGTATATGAGCCA
ATGCGCGGGATCGTTTCAATTTATTCTTGCCCAAGCGCATCATGCACTCG
CTGGGTGCATCGCGAACGCGGGCGCAAGATATGCTAGGGTTAAGGTTGGC
CCCCCGGCCCCCAATGGAGCGGGCGGCCACAACGAGGCGGATGACAGTGA
GGGTTTGACAGGAGTCTGTATTCTAATAAAGTAAGAAGGAAGACGACCGT
ACTCTATTTGTCACTATATATTGTAGGTGGCAACCAAAGATGGACCGTCC
ATCGACGTAAACGAAAGAGCCGCATGTACCATTTAAAAGTGATTGCGAAG
AAGGGACTGCCTCTCTCTGGTCTTTTTTGGGGTTCTTTTTTCAGAGGTAA
CACAGTGTGACGTCACGCACGTGACTCTTTGCCCATTTTTGTCTGCTCGC
GCAACGTTCGTCCAGATGTGCAAGCCCTCACTCACGCGTCGCCCGTGCGG
TTCCACCACACTGCTCTGCCAAATTAACCTCTTCCTAGTATCTTGAGCCA
TCGAACTGAAGATCTCTTAATTCATCGTTGGCTCGTTCGTCTTTTGCTCT
CACATAACACGAACGAGGCAGGTTTTCAGGACAGACGCCGTAACAATCAC
CCTCTCACACTCAGATTAAGCGGTTGAAAACGCCGATCGCGACGGAACCT
TTTACATACGCCCTACCTCTGAGCTGTTCGCTTCGATATCTGTTTGCCTG
TGGTAGGCTCGTGCTGACGGGGGTAGCTAGCGTGCTGGGCGGAGCCTGAG
CTCTGTTGCTTCTGTCGTTTGCAAATCGGCGTGTTGAAATCCCCCCCGGT
GGGGGATTCTACAAAAAACCCCACCGGTGGGGGGTTTGTGTCTCAACAGT
CCACCAGCTGTATATCGCCTACAAGGCACCAGTCGGCATACGACATCCAC
AACTGTGTTGCTGTGAGCCATCCTACAGCCGAAACGGTTCAGATTTGGTG
CAGCCATCGCTGATGGGAAAATTCATCAGGCGCCCCTGCCCCACTCGTTG
TACATATGTAGCCCTACAAAACTGCAATGGAGAGACAAACAACGGTCGGA
CGACATCTAACTGGTGGGGTGGATATGCCTGAAATACCCCACCACCTGGA
TCGCAACCTTACCAGGACTTGCAACAGAAGCACAAGCAAGGTGGCTTGAA
TGTGTGGTTGAGAAGAGGGACAGGACTGGGGGGACAGATCATAAGACCAC
TCCGGTCAGCCTGAAACTCGTGAAGTGGAAAATAGACAATTGGTTTCTCC
ACATGCTTCCCAAAACAAAAGAGACCCGACGCCTGGCATCATCGGGGACA
AGGACACACGAATTCATCGTACGTTTGGAAGGGGCCGTCGACAGGAGCAA
AATAGGCTATTCCAGGCGACTCCATTGACATTGATTGTATCTGTTGTAGA
ACGTGTTGACGTGCACTCTGCTGTGTATGTGCCTACCCGGCGTCAGGCGT
TGCGCCCCATACCGAAAAAACGAATACCCCATTTTGTGCCCAAACACGCG
GGGTATACCCCATTTTGTCAATCGCCCTTTATTTTGCTCTGTGTAACACG
TCGGGATCATTTTTTTGCTCCGCGCGTAACGCAAACATGCGTGGATGACA
CAAACAGTTTCGCGTTTCCACTTGACGTGTTTGAGGCCGCCCGGAGTGGT
TGTTGAATTACCTCTTCCTCGTCCTCTCCCTCTTCTTCAGCTGCTGCCTG
TTGTGTGTACTGTGTGTACATTAACCCATGATTCCTGCCACCATGCTTGT
GCTTGTGTTGCAAGTCCTGGTTAGGTTGCGATCCAGGTGGTGGGGAATAT
TTGGCATATCCACCCCGCCGGTGGGCACATGCACAGTTTGCCCCCGCCGG
CGCAGGCAGCATCGAAACGAAGCTCCTTGGGCATAATGACGATTCCGACG
ACCGCCCTGCCACACACGAATACGTCCTGTGTCGATCGGAGTTCTGTACG
TCGAGGTGGAGGTGGTGCTATATGTAGGCAAGGCTATGTACCCCACCAGT
GGGGTAGCTGCGAACGTCTCCCCACCAGGAGTGGCAGCGCCAAACCTGTA
TTATTTCGTCTTCACGACGGGTCCCATAATACCTCTGTAACGCAGCAACT
CACTGGTGCATGTCCTATATCGATTGGAGCGTTGCAGGACGACATAAAAC
TGGTGGGGTAAGAAAGGCTGATGTGCCCCACCAGTGAGATTGCAATGTTC
CCACTCCGACTTGGCGCGTTCGAGGTCTTCTGGCAGGAATACTTGATGTT
GCTGCTCGCCGCCTCAACTGCTCTCCGCTGCTGTGTGCTCTGGGTGCATG
TACAAAACACTCCGGTGGTTGAGTATTGATTGGAGCTTTGTAGGGCGAGA
TGCAGCCGTGGGGTTCTTGTGTAGATAAAGAAAAAAGCAAGAAGAAAGAA
GGTAGTGTTCGATTCCCATACATATTTGTTCCCCGCCTGGTGCTTCGTCT
GCCAACATGTACCAAACCAGAGTTTGCTCCCTGCTTGGAGCCTTGTAGGG
CAACATGAAGCTGGTGGGCCCTTCAAAGGCTATGTACGTACCCCACCAGT
TTGGGCAGCTCATGAATTCCCGATCAGCGATGGCTGCACCAAACCTGAAC
CGTTTTGGCTGTGTGATGGGTCCCACGATAACCCCACAACACAGCCACAC
CGTTGTGAAGTATGTAGACACTATTTTAACCAACCGGTGGGGGATTCTAC
AAAATACCCGTCCGGGGGGGTGTAGAAACGTCGTTTGAACATATTCACCC
ATCACGACAACAGAGAGCGTGTGTTGCGAGGTGCGGAGCTAAAACGAGTA
AAATGTGGGTGTGACAAAGGAACCTCTTGTTACCTTCCCCTGCGCTGTTT
CTCCTACCCCCCGGTGTTTGTCATCGGGGTTGAGTTTATGGTCGCCTGGC
AACGACTTCGCAAAATCAAGACGCCGTCCCCGGTGTTTGCCATTGGAGTT
AGGTTGTCGTCGCCTGGCAGCGATGTTGAAAACCAAGCCAATCACTTCGT
GACCTCGACCACGAGGATACCGCTTATTTTATCGCCCTTGGTTTTTTGTT
TGCGGTAAAATGAATGGTGGTAGAGTAGAATTGTTGTGCGGGGTTGAGAA
CCCTCACTTCCCGAAAGGGTAATAATCGCACCACGCTAGGCACACGCTGT
TGGGTGGTCGATGTTTGGTACATGCTGCTGTACCAAAGAACCAAATATTG
GAGCCCCTTCGGATATCCATGTACTGAATCACAAGAATGGTGTCACGACA
CGACGACCATCCTGAGAGTGTATACGAAGTATATTTGGTGATACTGCTTC
CACGGCGCCGAAGCGCTTGCTTTTCGTCACATCCAACATGGATATGCACG
GAAAACGTACACGTTGATTGCCACCTACCACCAAAAGCGTGCCATACTCG
CACCAAAAGTGTATAACAATCTTGTCTTCTGGTTTACACTAACCGACCGT
GTATCACGGTGCCGACGAGTTATGGGAGCACTGTACCAACCGCGGTAGCT
GCGAAAAATGTGGTCCCTAACCAGTCATTTTCTCTTGCGACCTTCCCTAC
GTTAACATAGAAACGATCACTCTGGGAAGATCTGCAGGCGATGCTGTGCG
CGGACGCCCTATCTGTTGCACATTCAACGCTTACGAATCTCCTGTTGGCG
CACTCGAGGGCCAAGATGTTCTTTCTGCCGTGGGGGTGTGAACCACAAAT
TGGGGATATGATGATTCCCCGCTTCGTTAGTGCCTCGATGATTTGCCTCC
AAAGGCCCGAGGTTGAGGTGTACGGCATTGAATGGCGGACAACAAGCAAT
GCTTACACGGTTTACAACAAGTGGGATCCATCCGTCAACCAGCTTGAGAT
GATTGTTTCCGACGACCTCAAAGGCGTTCAACACTGTTGTAATTAACTGG
GAGAACTTTGTTACGGCGGTTATTCTTGGGGACCTTTCTTCCCACAAGAG
TATCTCTGGTCAAAGAACCTCTTTTTGGCCGAGGCTTACCCTCCTAATAT
TGGATACCCAGATGGCGACGCTTTCGGCACAGAGAACTCAATGAAATGCT
TTTTACCGCACAGTTGTCACCCTAGGCTCCACTGTGCGCAGCACACGTGA
GAATCGTTGGTCTATCATGTTTTGGCTCAGATGGTACGGTGTGTATTGTA
TGTGTGATGCCTCTCCTCCGCCTCAGACTTGCTGTGCTCAACTCCCGTCA
ACCCGCCTGTCCCTAGCCCGAGTCGTAAAACTGTACATCGTCTGATAATG
GAAGTTGCCGACTTGGGTGCAGTATGAAAAGAAGTTTTGGGGGACACTTT
TTCATACTGGAATTCAGATTCTTTGGAGAGCCTGTAGCCCCTAGACATTT
CTTTGCGGAGGAACTGTGTGCTACTGTGTTCTACTATTCATGTAGGAGGG
TCAAGCATGCTGTTTTCCGGGAGTTTTTCTCTCTCTTGGTGAGTGGGGTT
GTCTCCATAGGGATTCCTAATTCAGATCCAAGCCACTCAGGAAGAAAATC
TCAAACGCAAAAAAAAAAGGTTGTGGCGCGAAGCACGCAGGACCCTCTTT
CGCTGTTCAACCGGCCATTCCC

protein sequence of Ec-00_003690.1

>Ec-00_003690.1 ID=Ec-00_003690.1|Name=Ec-00_003690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=270bp
MCRNLVAYAIAPGSRPTQDIAKAFSRERLEEQATLAPVRMWANIWQILGV
TMIPIFTVGTGLSMASRAEDAGVIAVRDGVVVQDKGCPHAISPDEADIRK
STPSWPGGVLTLTSLYQVGRSGNHYVAISSMFSMAFCCQVKVLELPVKDV
RLPTESGKQFNSSTNLFGFTSEYNNERAGQQHVKTGFEHLQGRPDVCPRE
RVMDGREAFFMSGRKMVWLLSRYRAGSRCGTLWWPTFIEQAGVVQELAFD
GHKPEHVCLCVFSVLQSGR*

mRNA from alignment at chr_00:3942646..3956940+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_003690.1 ID=Ec-00_003690.1|Name=Ec-00_003690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=14295bp|location=Sequence derived from alignment at chr_00:3942646..3956940+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGACTGTTACAAAATAAACACCAGGTTGTTCTATCTGCTCTTCGAACAAA
CCTTCTCATTTTTACAATGCGCTCGCTCCAACGACCATCACACAAACTTG
CCAATAATACGATGGGTAGCGGATAGCTCTGACAACGCCCACCAGGTTGA
GAGTCATGGCGTCCACGCTTGCAAGGTAAGAGGGTGAGCAGCTGACGGTA
CCAATTTCGCATCTCACACAAACAAGCACGAACTGCTGTCGCATTCATGA
TTATATTGGCACGTGTTGGGTACGGGTTTCGCAGTCTTCCCATCAAAACA
TAACAAAAACAAAAAAAAACGGTATGCCGAAGGGTGTCGTGTGTGTGAAA
GAGAGAGCAAGTAAACATAACGCATACACACAATGATATATTTGAACGAC
ATGTAAATTTAATGTGTACATGCCAAAATAGAGTGAGGCGACCGCCACGA
CACGACGTGAAAATCACATTATTTTTTCGATGTGGTAATCGATCAGGCTA
TCAGATGCGTTGGGGAGCGAGGCCCTCGTTCTTGAGATGCTGGGGAGCTT
CTCTGGCTGCTGCCTCCCTGCTGTGTACGTGCATGATTGCGGGACGTTGG
ACAACCACACCTGCCCATAACAATTTGAATGTTTGAATATGTTGACCGCA
GGTTCCGCGAGATATCACACCCCGCGTGGTGACCAATTGGTTCAAACGTT
ACCACACAAGTGCTCGTGTGGTGTATCGGGTGTGCTATCGCATTCTACAG
GGACACCTGGATTGAATGTGAATGCATCTAATCCAACCTTTGCAGCATTG
CCCGTGCTGTACTCTGTTGGGCGTTTGTACACCGGAAATGTTTCGGCTGA
TGCTACAGGACCTGAGATTCAACTGTTCCCGGAAATCTACACAAGAGAAA
GCGCCACGAAAAGCGCGCATGAACGCACATGGTCTCACACGGCTGGCCTA
CCCGAAAGGCTTGCCTATCGGCGCACCCTGCGCGGTTTGGTCGTACTATG
ACTTGTGGGCAATAGGTCGCGTTGCACGCTTTCAATGACTAAACTACGAC
CACAATGAACGGACATGATGCCAATGTTTGCTGAACGGACACTGAAATTC
GTTTTTTATTTTTCCGAAATGGGTCGACAAGAAACAAAAGCGGTAAAGAC
ATTTGAGACGGTGAACATATGAAAGGAGAGAAACAGCGCACAACGTCGCA
CAGGGCCGATCACGTTTGTGACGTAGTCACTGCGCTCGGAGGGTGATTAA
ATTTGGCGAGGGACCACGAATAACGATGCCTACCGAGGCATCCTCAAGAT
ACGAGGTATCCTCAAGATATCGTGAGGAGAGCACCGTAGGACGATATCGG
TGTGTTGGTGACAGTCAGCCACACCCTCTGTGTTTCGATTATCGAACTTG
CTCTAGAAGACGAAAAGACAGATGAAGAGTGATGAAGACAGGAAGACGGC
AAACCGGTCAGCGTGAAGACGAGAGACACAACAGCGCGCGCGCATGGTTG
CATGTGCCGCAATCTTGTAGCGTATGCTATTGCGCCCGGAAGTCGACCTA
CTCAAGATATCGCGAAAGGTGTGTCGTGATGTAGGTCGACAACGGGTTGT
TGATTGCTGCAAACAAAAGCTGGCATAAAATCCGAGTCTTCTTAACAGAG
CGATGACGATCGTGACACGGCAAACCAGTGAAGACGAGATAATACAGGGC
TTATTTATGACGTACGCCACGTACTTCAAGCGGAGTTGATCAAAATTGGC
GGCTGGCCATGATTTGGGATGCCCTATCAAACAATAGTACGGATGTCACG
AGCCGTGCGCCATAGATGAAGATCGGCTTTCGAGGGGCAGTCGGGCAAGG
GTGGGGGGATCGGAAGAGGGTTACTGCGACAAAGCCGGATTTAGGTCGGA
GAGACTGAACGCTTCAGAAATAGAGGCTAATAGAGTACGGCCGTCTTCCC
TGCTTTAGAAATAGAGGTTAATAGAGTACGGCCGTCTTCCCTCTGTGTAC
TTCACTCCCTCCAAAACCCTTGCCATCATCCGTCTGGTTATGGCCGCCCG
CCCAGTAAGGGAGGGGAGCCAATCCTTAACTCTAGTCATTATTAAAATAA
AGTAAACATATTATGACTTGGCAGAACATGCGCTGGCTCGAGGGGGGGGG
TCCGGTGGGGGGGTTACCCTCCCCCGGCACTCGTATCGTGACCCAGCAGA
CAACGCGTGCGATGGACCAAGCATACTACGCGTGTGATGAACCCAGCCAA
CCACGCTGGGGGGGTTACCTCTTCCTCGTGTTACCGGACGATGTCTTGCA
GGACAGAGAGTTAGCAAGAGATTTCTTCAAGGAGGCGTTCCAACAGCCCA
TCGATGCCATCAAAGCTCTAGCCGACATGCGACAAAGGGCGCCGGCCACT
GTTACGGTTAATGTGAGGGGTAGGGGAGTTGCGTACGCTACACTGTGGGA
CGAATGATGGTCATACAACGTCCCAGACTGGTAGGCGGGTGTATGGCCTG
GAGGTCTGTACAACGGTTTGGGTGAGGCAACGTGTGTGGGGGGTAGTATG
CACTCGCTGAGCGGTCGAACCATTAATCATCTTGTGCAACATAGCCAAGT
GGCTACGAACAAAGAGAAGAAAGGCACACCGGTGTGTGACGAAGCACATA
AGGAACTCTTGGAGAGGGGAACATGACGCTGCCGCGCATGAACTGTCGTT
GAGTACATGCGAGCAACACGGCACTCCTGTGACGCACACTGCACGACGCT
CGAATCCCCGTGAAGTGCCTTCGAGCGAATCGAGTCACGCGGCACTGTGA
CCGCACACTGCACCGCGCCCGAAACCCCGTGAAGTGTCTGCCAGCGAAGC
GAGTTACGATCCCACTATGTCTTACTTCAAAACCATTACACCAACAACAC
ATCAAACCAGGCTATGAATTGTTTGCGCTCTCGTGTGCCCACCAACAACC
TGTTACACTCCATAAAGTATGCGCATGTCGAGAAGGTCGAGCGCGCATCC
CTTCGTACACTCCTTTCGGTGTCGCAACAGATTACCCCACGCAAATAAGG
GCAATGACAAGTATAAATAAACGAACGTCGATGTTCAACATCTTGCAGAA
CACTTGTCTCAGCGTGGCGGCGGAAGCCCCTCAAAACCCTTGTACCCTAT
CCTTCGTTTCTTCGTGCGTTTCCGGCTATCACGGTTCTTCTGCATAACCG
CTGTAAAAATCTAAACGCATCGGCGTAGCGGCCACGCCTAACACCAGGTT
GTTTATGATTGAGTACCGCAGTAACGTCGCGTACGGGCTGTATGTCATTT
CCAACGTAATTTCCAAGAGTATTAGATCACCATGTCGCGCAAACGTTAAA
CCTGTCGCCCCCGTGGTTCAGATCGTAACCTCGAAAGCACGTTGTGGATA
GGGTCTCGAGTTCGATCTCGGTCGAGGTGCATTGTTCCAACTTTCCAGAT
TACTCTTAGAAATAGCTGCAGACGCTCGGCCGTGAGCGAAAAAGGATAGG
GGGAGGTCTAATGTCACAGGGACTCTCATTAGTTGACAGAGTCGAGGCAT
CTTTTCCCACGTTGCCTTTCCTGTGCCAAACTACGCGTGATCTTCCGAGC
TTGTGCGAGAACAACATTTTGTTCGATGTACTGACATTTGCTTTGAATCA
ACTTCTCATTTTGCTTCCACAGCGTTTTCCCGAGAAAGGCTTGAAGAGCA
GGCGACACTCGCTCCGGTCAGGATGTGGGCAAACATATGGCAAATATTGG
GAGTCACCATGATTCCAATATTTACGGTAAGTGCAAGCGATTGCCATCGT
CAACATACTGGCGACAATACTTGAGTTTGAGGCCACGATGTTTGCATGTT
CATCCCTCCCAATCCCAGCAAGAACTACTGTTTGACTGGGAATGTTTTCT
CCTCACCCAACGGTGAGGGAGGACGCAAGACGGTATCACGGATTAGGTCT
AAGGTTTCGCATGCGGCAAGAGACGGCAAAGCGTTGGAGGCAGAGGGGAC
TCGCATGGAATTTGCTCCTGGTACAGTGGTTGCCTTTCGCCCATGTCAAT
GGCTTTCCTACAAAGAGGGTGCCCACGACACTTTCAACAGGTGGGAACTG
GGTTGTCTATGGCAAGCAGGGCGGAAGACGCAGGCGTGATCGCTGTTCGA
GATGGAGTCGTGGTGCAGGTGTGTCGGACATGTTGGTGCCACCCCCTTCG
ATACCCCTCTGCGCTAATCTCTCCATTTTCTCACAACCTCGCTGCTTGGC
TAAAACCTTCTTGTCGTCGGTGTGCATAGTACTTCTTTTGGTTCCGGGGC
GTGTTGGTACTTCTTGAACCAGGAAACGCCTTGTTGGTGTTCCTTAGCTA
GTGGACTTAGCGGCGTATGGCTCCAGCTTTTTGCCCCACATATGTCATGG
TGATGATATCATCACTGGCCATGCGTACGTTTTTCTGGCGCAGCAATTAA
AATCGATAAGAATGCGCGGCAATTAAAATTACAGAAGTTGAGGCGTGGGT
GGCCAGATTGCGCCATTGCAAAATTCGTATCCTGCACGTCTGCTCTTGAT
GAGGTGTCCGAGCGTAATTAATCCGCACAAAGTTCGAGACCCGTCACAGG
GGCAGAAGGAAGCACACCGTCCCCTTGTTGTGTGTTACAACCAAGCTCGT
GCCATTCGAGCCGCGAAGAAGGCTAGACAACATGTCAACGCCGTTTGCTA
CGCTGGCGGTACCGTTCCAGCTTTATCACTAGGTAAAGGTTTCCGAGCTG
TGCTTACTGATTCTTCGTTGAAAATCGAAAATTGCCATTGCTTTTTCCGT
TGCGCCCACGCCAGAACGCATGGGACAATTTCCGAACCAAACATGGATGC
AAACAACACGCCATCTTTTTCGATAATTTTTCTCGTCGAGCTCTGCCCAT
GTGCACATGCACCAATCGTGCTGTTTTCGTGGGTTGTCGGTTGTTGTTTC
TTGCGCGAATAACGAGCAGGACAAAGGATGCCCGCATGCCATATCACCGG
ACGAGGCGGACATCAGGAAGTCTACCCCGTCCTGGCCGGGTGGTGTTTTG
ACTCTCACTTCCCTCTACCAAGTAGGTGAGCGTTTCCGGCTGAGTAGTAC
GCATTTCCCTCTTCTTAGGGATGCTAGCTGCGGTATTCTCAGATAGTGCT
CTGATAGATGCTCTGGTTGAATTGAACGGAAAAATGATAATCTAGACACA
GTTCGGGTTTGCTGGTAGTGTGTGTACTACTCCCGAACTGAGATGAGTAG
AATATCTGTACGTTGTCGAATTAGTCAAAGACCAAGAAGCTGGTTGGTTC
ATCGTCACCATCAAATCCCTTTCAAGCAAATCTCCGTGATCGGAACCACT
AACAACCGATCGAAGACCAATGAAAAGAAAAGTATGATCGAAAACCAATG
AAAATTCTTCTTGGATGTAGTCTAAATATCCGGCACCGAGCTCAACTACA
TTTTTTGTAGTCAACGTAATCGAAATTCCAATTTGAACACAAATAGTCTC
GTCTGTTTTCCCAACCGCCGTAAGCCAGGCCATACGTTTTTCATTATGAT
TCTGAATTTCGAGCATGGCTCAAACGCTGCTTCACCCGTTCCACCCATGT
GACATCGGTTTACTAGGGTTTATCATAATCATACGATAGCTAATTCTAAG
GTGCCCCGCGTATTCCTCCTCAGGACGATCGGGGAATCACTACGTGGCGA
TATCGAGCATGTTCTCAATGGCGTTCTGCTGCCAAGTGAAAGTGGTAAGT
TGGCTACACAAGATTTGTCTGTAAACTTGATTCGATCAGAAATTGTGTCC
CGTGAGGACCTACATCCACCTACTGTCCGACATGTTCTGCCCTCTACGCA
TTGATTATGTTGCATCGATTGGGGTCTGTGTGTTGGACGAAATATGTAAC
CTGACCAATTTGAGTCCAGTCAAGTAGTTTGAAATACGATGGGCGCTCGT
ACAATACGTTCGCGTAATCAGACACACTTCATGCTAGCTCTGCGCTGTTC
CACCATTAGCGTAAGGGTGCCCCTCGCTAGGACTGACGACCTACTTGGAA
GTCATTTCGATGTTTCCCGAGCGGGTAAACTGCGGTCTACGTTGGAGTCG
CAACGGAGAGTCAGACTCTCCTGAGGTTCATGGCCTGATTGTCGGTTATG
CGTTTGGTCCCCAATGTGAGCATCGAGCGTGTTTCACACTCTCTACAGTT
TTGATAATCCGCCCATTGGAAATGCCCATGTGTAGCCCGTGAGCAGCCCA
TGGTCATTTCCCATTGACCGCCCATGGACCGTCGATGAGTGAGTGCCCTC
CAACCGGAACGACGTTACGCCGAAACAACAGTCGATCTGCTCTAGAACGG
GCACTATGAGAGTTAAATACCCTAACGCTACCGCGAACCCTAACCCCAAG
CCCACACGAAACGTGCTAGGTTGGCGCTGGTTGGCCAAGTGCTAGTTTAA
TGTGCCGGTGGCGAAGTGCTAGGTAACGGCCCGCGGTGCGCACTTCGGGG
ACAGTTCATGGGCTGCCCATGGGCCTACCCATGGGAAGCTAAGGGACAGT
CCGTGAAGTGCCAATGGGCTGCCCATGGGCGCCCCATGGGCGGTGTAGCA
TGACTGCCAGTGGTTTGGGAGATTGGGCATCTAGCGTAGCGGCAGTGGTG
TCGGCAGACCATGTCTTTTCGAACTTTGTGCCTTTCGTATGGTTACGACG
TACGTAGCGCCATGCGAGGTACAGTGTGTCCCTTTCGCGCGGGAGGTTCT
CTCGGTCAAACCATCGCGGGAACGACGGTGGGATCGTATGCTGGAGGTCG
GGGGTTGGCGTCTGGAGTCAGTAGCGACGTGCTCTCGTAATCACCACTCC
TTGGTGTGTGCAAAGTTGAGAGATATTCTGTGAAAACCGCTACGCCGACC
TTAACGCCCTTCTGGCAGTGTTCCGACAAGAGCTTACCTCATGTGCGGAT
CGATTGACGCCGGTGCCACGACGTGTATAAATGAAGTTGGGTGAGACCAT
ATTGTGCCGGACGAGCGGTCAAACTTTGTAAAGCCAACGGATGCAACGAA
CAATGGGCGGGACTACAGTCGGGCGCAGGAGGCCTCATCCAGTCCACTTT
TTAAATCACATGTCCTTGGTATGAAGACAGATACAACAGAACAACGATTA
GATGGATGTATTCAAGAATTGGGACAAATCGCGAACCACGGAACTCGTCG
GAGGTCTTGGAAATGTTTTGCAAGCAAGAAATGACACGTCGTATTTCACC
TCCGAAACATAGGGAGCAGCTTCGGCCACGATATTCTCGAGGCCACCCCG
CCCACCTGGCGGAGCGTTGACACATCACGCATGATACCTGTACAATACCT
TGATCCTTGATTGGTGCGCATTCCGCGATGGGAAACACCAGGTGTGCTTG
ATCAGCGCGGTGCAACATTTCAGGCGAGCACTCCTGCCCGGCGCAGGAGG
CCTAATCTAATCGAACACTCCTTAAGTTGATCCTCGGGATGGAGACAGAA
TACACGAATGCTATGCGTAGTCCCGAGTATTAGGTCCACACAAAGCATGT
AGTTCACGCTCAATCACAACAACGAAGGTTTCAATCAACCTTAACCTTTT
TGCATCTTCCCATTCACGCTGCTTGTTTGGTGGTACTCGTTTCAGCTTGA
GCTTCCCGTCAAGGACGTGCGCTTGCCAACAGAAAGCGGGAAACAGTTCA
ACTCGTCCACCAACCTCTTCGGTTTCACGTCAGAATACAACAATGAACGT
GCTGGGCAGCAGCACGTGAAAACGGGTTTCGAACATCTTCAGGGCCGACC
TGACGTCTGTCCGCGAGAGAGGGTCATGGACGGACGGGAGGCGTTCTTCA
TGAGTGGTAGGAAAATGGTTTGGTTGCTGTCACGGTATCGGGCAGGGTCT
CGCTGTGGAACGCTGTGGTGGCCAACGTTTATCGAACAGGCAGGGGTTGT
TCAAGAGCTAGCATTCGATGGACACAAACCTGAACATGTATGTTTGTGTG
TTTTTTCCGTTCTCCAGTCCGGTCGGTAGCGATTCACTTGCAGATAACCA
CGAACATTTTGCACGGATTCTGGAGTACCCGGTACGTACTTAATACGTCC
TTTGGGAATGTGCTGTAAATGCTGCCCATCATTGTATCATTCTTTCGCTT
GGCCGTCCGGCTGACATTGGTAAGGCCCGAAAAGAAAACGATGGAATAAC
AGCTCCTAGGATATCATGCAGTGTCATCGTCAAGACACGGAAATAAATAT
GCTCATCATTCGCACCCGAGCCGTTCCCGAGGGTTGGGTTTCTCGTTTCG
TTCATTGCTCGGCGTACACGCCGAAATAAGAACCTGGGAAAAACCACGAA
CCCATATTTCTGGTGTTCCTCGTGCGTGACATCATCGTTTGGTTGTGCAG
ACAATCACGAAGACCTTCAGGCATGCATGAACAATGTGAAGATGAGAGGG
TGCGAGGCCGTGTACTTCCAGGGATCGTTTGGGGGAGAAGAATATTGTTC
AACACCACGACACCGACTCCCCGCAGATGAGGAGGAACCCGGTCTATTAG
TGGCCGGGTCAACCTCGCCGCTCGAAACAAAAAGGGCTAGATCACTAGTT
TTTCACTTTCGATCCGGGGATGTTTTCAAGCCGAGAAAGGACTTCCACTT
CCAGACGTACGGCCAGGTAACGTATATATTTTGCAGAGTGAACAGCATGA
CCCGGAAGTTGCATAGCTCTCTTTGTGGCTGTTCATTCCCGTTCACGATG
GTATATCAGAAGACAAGCTCTAAGGCGCGTCAATTCGTTCTCATTTTGCT
CACAAAAAAAGCCACACAAAGCGTCTAAGTGGTTCAGTTCAACGCGGTAT
GGGAACAGCACAGTGCAATGCGTGTGTTTCATCTCACTGACCGCCCTCAC
AGTGGCAGAAACGGCCGCGGAACCAACGCTCAGAAATCACAGTTTGCACA
TGGCATTTCCCTCTCATGCCAATGTTTCGTTTTCATGTTCTCGGCCTCGT
TTTTTCTTGCGCGTGAAGCCACCTTTGCTTTACGTACTGGCAGTTATCGC
CAGCAAGAAGTGGAGCAATTTGACATTCATTACAAACGGGGAACATGAGA
GGCTTCTCAACCCTACGTTCAGAGTAATTGAAGAGCTCATCAGCCAGGGG
ATTCTTGGGACAAACGGGACGATAGTGGAAACTTATAAGGTGGGTGGGTG
TAGGCGACCACGTTGTGCAAGCACGGAACTTTCTTGTCCCCAAACAAAGT
TAGCGGTGGTATATGAGCCAATGCGCGGGATCGTTTCAATTTATTCTTGC
CCAAGCGCATCATGCACTCGCTGGGTGCATCGCGAACGCGGGCGCAAGAT
ATGCTAGGGTTAAGGTTGGCCCCCCGGCCCCCAATGGAGCGGGCGGCCAC
AACGAGGCGGATGACAGTGAGGGTTTGACAGGAGTCTGTATTCTAATAAA
GTAAGAAGGAAGACGACCGTACTCTATTTGTCACTATATATTGTAGGTGG
CAACCAAAGATGGACCGTCCATCGACGTAAACGAAAGAGCCGCATGTACC
ATTTAAAAGTGATTGCGAAGAAGGGACTGCCTCTCTCTGGTCTTTTTTGG
GGTTCTTTTTTCAGAGGTAACACAGTGTGACGTCACGCACGTGACTCTTT
GCCCATTTTTGTCTGCTCGCGCAACGTTCGTCCAGATGTGCAAGCCCTCA
CTCACGCGTCGCCCGTGCGGTTCCACCACACTGCTCTGCCAAATTAACCT
CTTCCTAGTATCTTGAGCCATCGAACTGAAGATCTCTTAATTCATCGTTG
GCTCGTTCGTCTTTTGCTCTCACATAACACGAACGAGGCAGGTTTTCAGG
ACAGACGCCGTAACAATCACCCTCTCACACTCAGATTAAGCGGTTGAAAA
CGCCGATCGCGACGGAACCTTTTACATACGCCCTACCTCTGAGCTGTTCG
CTTCGATATCTGTTTGCCTGTGGTAGGCTCGTGCTGACGGGGGTAGCTAG
CGTGCTGGGCGGAGCCTGAGCTCTGTTGCTTCTGTCGTTTGCAAATCGGC
GTGTTGAAATCCCCCCCGGTGGGGGATTCTACAAAAAACCCCACCGGTGG
GGGGTTTGTGTCTCAACAGTCCACCAGCTGTATATCGCCTACAAGGCACC
AGTCGGCATACGACATCCACAACTGTGTTGCTGTGAGCCATCCTACAGCC
GAAACGGTTCAGATTTGGTGCAGCCATCGCTGATGGGAAAATTCATCAGG
CGCCCCTGCCCCACTCGTTGTACATATGTAGCCCTACAAAACTGCAATGG
AGAGACAAACAACGGTCGGACGACATCTAACTGGTGGGGTGGATATGCCT
GAAATACCCCACCACCTGGATCGCAACCTTACCAGGACTTGCAACAGAAG
CACAAGCAAGGTGGCTTGAATGTGTGGTTGAGAAGAGGGACAGGACTGGG
GGGACAGATCATAAGACCACTCCGGTCAGCCTGAAACTCGTGAAGTGGAA
AATAGACAATTGGTTTCTCCACATGCTTCCCAAAACAAAAGAGACCCGAC
GCCTGGCATCATCGGGGACAAGGACACACGAATTCATCGTACGTTTGGAA
GGGGCCGTCGACAGGAGCAAAATAGGCTATTCCAGGCGACTCCATTGACA
TTGATTGTATCTGTTGTAGAACGTGTTGACGTGCACTCTGCTGTGTATGT
GCCTACCCGGCGTCAGGCGTTGCGCCCCATACCGAAAAAACGAATACCCC
ATTTTGTGCCCAAACACGCGGGGTATACCCCATTTTGTCAATCGCCCTTT
ATTTTGCTCTGTGTAACACGTCGGGATCATTTTTTTGCTCCGCGCGTAAC
GCAAACATGCGTGGATGACACAAACAGTTTCGCGTTTCCACTTGACGTGT
TTGAGGCCGCCCGGAGTGGTTGTTGAATTACCTCTTCCTCGTCCTCTCCC
TCTTCTTCAGCTGCTGCCTGTTGTGTGTACTGTGTGTACATTAACCCATG
ATTCCTGCCACCATGCTTGTGCTTGTGTTGCAAGTCCTGGTTAGGTTGCG
ATCCAGGTGGTGGGGAATATTTGGCATATCCACCCCGCCGGTGGGCACAT
GCACAGTTTGCCCCCGCCGGCGCAGGCAGCATCGAAACGAAGCTCCTTGG
GCATAATGACGATTCCGACGACCGCCCTGCCACACACGAATACGTCCTGT
GTCGATCGGAGTTCTGTACGTCGAGGTGGAGGTGGTGCTATATGTAGGCA
AGGCTATGTACCCCACCAGTGGGGTAGCTGCGAACGTCTCCCCACCAGGA
GTGGCAGCGCCAAACCTGTATTATTTCGTCTTCACGACGGGTCCCATAAT
ACCTCTGTAACGCAGCAACTCACTGGTGCATGTCCTATATCGATTGGAGC
GTTGCAGGACGACATAAAACTGGTGGGGTAAGAAAGGCTGATGTGCCCCA
CCAGTGAGATTGCAATGTTCCCACTCCGACTTGGCGCGTTCGAGGTCTTC
TGGCAGGAATACTTGATGTTGCTGCTCGCCGCCTCAACTGCTCTCCGCTG
CTGTGTGCTCTGGGTGCATGTACAAAACACTCCGGTGGTTGAGTATTGAT
TGGAGCTTTGTAGGGCGAGATGCAGCCGTGGGGTTCTTGTGTAGATAAAG
AAAAAAGCAAGAAGAAAGAAGGTAGTGTTCGATTCCCATACATATTTGTT
CCCCGCCTGGTGCTTCGTCTGCCAACATGTACCAAACCAGAGTTTGCTCC
CTGCTTGGAGCCTTGTAGGGCAACATGAAGCTGGTGGGCCCTTCAAAGGC
TATGTACGTACCCCACCAGTTTGGGCAGCTCATGAATTCCCGATCAGCGA
TGGCTGCACCAAACCTGAACCGTTTTGGCTGTGTGATGGGTCCCACGATA
ACCCCACAACACAGCCACACCGTTGTGAAGTATGTAGACACTATTTTAAC
CAACCGGTGGGGGATTCTACAAAATACCCGTCCGGGGGGGTGTAGAAACG
TCGTTTGAACATATTCACCCATCACGACAACAGAGAGCGTGTGTTGCGAG
GTGCGGAGCTAAAACGAGTAAAATGTGGGTGTGACAAAGGAACCTCTTGT
TACCTTCCCCTGCGCTGTTTCTCCTACCCCCCGGTGTTTGTCATCGGGGT
TGAGTTTATGGTCGCCTGGCAACGACTTCGCAAAATCAAGACGCCGTCCC
CGGTGTTTGCCATTGGAGTTAGGTTGTCGTCGCCTGGCAGCGATGTTGAA
AACCAAGCCAATCACTTCGTGACCTCGACCACGAGGATACCGCTTATTTT
ATCGCCCTTGGTTTTTTGTTTGCGGTAAAATGAATGGTGGTAGAGTAGAA
TTGTTGTGCGGGGTTGAGAACCCTCACTTCCCGAAAGGGTAATAATCGCA
CCACGCTAGGCACACGCTGTTGGGTGGTCGATGTTTGGTACATGCTGCTG
TACCAAAGAACCAAATATTGGAGCCCCTTCGGATATCCATGTACTGAATC
ACAAGAATGGTGTCACGACACGACGACCATCCTGAGAGTGTATACGAAGT
ATATTTGGTGATACTGCTTCCACGGCGCCGAAGCGCTTGCTTTTCGTCAC
ATCCAACATGGATATGCACGGAAAACGTACACGTTGATTGCCACCTACCA
CCAAAAGCGTGCCATACTCGCACCAAAAGTGTATAACAATCTTGTCTTCT
GGTTTACACTAACCGACCGTGTATCACGGTGCCGACGAGTTATGGGAGCA
CTGTACCAACCGCGGTAGCTGCGAAAAATGTGGTCCCTAACCAGTCATTT
TCTCTTGCGACCTTCCCTACGTTAACATAGAAACGATCACTCTGGGAAGA
TCTGCAGGCGATGCTGTGCGCGGACGCCCTATCTGTTGCACATTCAACGC
TTACGAATCTCCTGTTGGCGCACTCGAGGGCCAAGATGTTCTTTCTGCCG
TGGGGGTGTGAACCACAAATTGGGGATATGATGATTCCCCGCTTCGTTAG
TGCCTCGATGATTTGCCTCCAAAGGCCCGAGGTTGAGGTGAGAGTTCGGC
TTCCTGTTGTCTATCCCTGGTCGACTGCTCCCACTTAGAGACAAACCGCG
GTGCGTTGTATATTTGATCCGAAATGTCCCTCACCAGAATCGGTCGTCTC
AGTTGGCATTGGCAACCACAAGAGAAATATTGTGTTGAAAATCACCTCTA
TTCCGAAGGAGATCAGTGTAATCGATGGTGTTTTTCAGGTATTTTACATC
TAGAATACGACGATTGCCCCAGCATCTCTCCCGTTTAGTGTGTCCACCGG
CAGTCCTACATGCGATATGGAAAAGGTCTTCCTCATAGAGTGTCATGTGT
CCAGAAACATCATCTATCGCATTGAGCATCAACGCATATGGCCGTTGCAG
ATAGGCCTCTCCTCTCCTCGGTATCCCTAACCCCTCCCCGTACATATCCC
ACCCGTCCATTCGCTTTTGTGCCTGTCGTACCGGAGACAGGTGTACGGCA
TTGAATGGCGGACAACAAGCAATGCTTACACGGTTTACAACAAGTGGGAT
CCATCCGTCAACCAGCTTGAGATGATTGTTTCCGACGACCTCAAAGGCGT
TCAACACTGTTGTAATTAACTGGGAGAACTTTGTTACGGCGGTTATTCTT
GGGGACCTTTCTTCCCACAAGAGTATCTCTGGTCAAAGAACCTCTTTTTG
GCCGAGGCTTACCCTCCTAATATTGGATACCCAGATGGCGACGCTTTCGG
CACAGAGAACTCAATGAAATGCTTTTTACCGCACAGTTGTCACCCTAGGC
TCCACTGTGCGCAGCACACGTGAGAATCGTTGGTCTATCATGTTTTGGCT
CAGATGGTACGGTGTGTATTGTATGTGTGATGCCTCTCCTCCGCCTCAGA
CTTGCTGTGCTCAACTCCCGTCAACCCGCCTGTCCCTAGCCCGAGTCGTA
AAACTGTACATCGTCTGATAATGGAAGTTGCCGACTTGGGTGCAGTATGA
AAAGAAGTTTTGGGGGACACTTTTTCATACTGGAATTCAGATTCTTTGGA
GAGCCTGTAGCCCCTAGACATTTCTTTGCGGAGGAACTGTGTGCTACTGT
GTTCTACTATTCATGTAGGAGGGTCAAGCATGCTGTTTTCCGGGAGTTTT
TCTCTCTCTTGGTGAGTGGGGTTGTCTCCATAGGGATTCCTAATTCAGAT
CCAAGCCACTCAGGAAGAAAATCTCAAACGCAAAAAAAAAAGGTTGTGGC
GCGAAGCACGCAGGACCCTCTTTCGCTGTTCAACCGGCCATTCCC

Coding sequence (CDS) from alignment at chr_00:3942646..3956940+

>Ec-00_003690.1 ID=Ec-00_003690.1|Name=Ec-00_003690.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=810bp|location=Sequence derived from alignment at chr_00:3942646..3956940+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGCCGCAATCTTGTAGCGTATGCTATTGCGCCCGGAAGTCGACCTAC
TCAAGATATCGCGAAAGCGTTTTCCCGAGAAAGGCTTGAAGAGCAGGCGA
CACTCGCTCCGGTCAGGATGTGGGCAAACATATGGCAAATATTGGGAGTC
ACCATGATTCCAATATTTACGGTGGGAACTGGGTTGTCTATGGCAAGCAG
GGCGGAAGACGCAGGCGTGATCGCTGTTCGAGATGGAGTCGTGGTGCAGG
ACAAAGGATGCCCGCATGCCATATCACCGGACGAGGCGGACATCAGGAAG
TCTACCCCGTCCTGGCCGGGTGGTGTTTTGACTCTCACTTCCCTCTACCA
AGTAGGACGATCGGGGAATCACTACGTGGCGATATCGAGCATGTTCTCAA
TGGCGTTCTGCTGCCAAGTGAAAGTGCTTGAGCTTCCCGTCAAGGACGTG
CGCTTGCCAACAGAAAGCGGGAAACAGTTCAACTCGTCCACCAACCTCTT
CGGTTTCACGTCAGAATACAACAATGAACGTGCTGGGCAGCAGCACGTGA
AAACGGGTTTCGAACATCTTCAGGGCCGACCTGACGTCTGTCCGCGAGAG
AGGGTCATGGACGGACGGGAGGCGTTCTTCATGAGTGGTAGGAAAATGGT
TTGGTTGCTGTCACGGTATCGGGCAGGGTCTCGCTGTGGAACGCTGTGGT
GGCCAACGTTTATCGAACAGGCAGGGGTTGTTCAAGAGCTAGCATTCGAT
GGACACAAACCTGAACATGTATGTTTGTGTGTTTTTTCCGTTCTCCAGTC
CGGTCGGTAG

Synonyms

The feature 'Ec-00_003690.1' has the following synonyms


Synonym
Esi0235_0029
Esi_0235_0029