Ec-00_003670.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_003670.1
Unique Name	Ec-00_003670.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	281

Homology

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BLAST of Ec-00_003670.1 vs. uniprot
Match: D7FSJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ6_ECTSI)

HSP 1 Score: 527 bits (1358), Expect = 1.020e-188
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1

Query:    1 MHAPQDSEHVAAEQEDVLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQGKGWVRWGWV 840
            MHAPQDSEHVAAEQEDVLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQGKGWVRWGWV
Sbjct:    1 MHAPQDSEHVAAEQEDVLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQGKGWVRWGWV 280

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BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5J7W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W8_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 9.400e-122
Identity = 205/255 (80.39%), Postives = 220/255 (86.27%), Query Frame = 1

Query:   49 VLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            VLVAALRSLD+NMKRPSPYFDDLDAIAAGKSGRGSEQEEGE EG IPAKALLMFRGV+ MVA+ARD TEPFT EGVDYS ADLYDAM+KE+  EL D   SAGG         XXXXXXXXXXXXXXSGS TERKGPHCMMRLVGILCED IRPL+I+SR QATRQELDTS VGPR  LWTEVTDRFRDP H VRKIVDDEQV+HV+PNIIQQPNIS+EK+TK+W+  K +WN  YANWK ESGNNQPWL+FCQG
Sbjct:  236 VLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGE-EGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELED---SAGGXXXX-----XXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKVWSAAKAKWNTPYANWKSESGNNQPWLSFCQG 481

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BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 1.110e-119
Identity = 203/254 (79.92%), Postives = 217/254 (85.43%), Query Frame = 1

Query:   52 LVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            LVAALRSLD+NMKRPSPYFDDLDAI AGKSGRGSEQEEGE EG IPAKALLMFRGV+ MVA+ARD TEPFT EGVDYS ADLYDAM+KE+  EL D   SAGG         XXXXXXXXXXXXXXSGS TERKGPHCMMRLVGILCED IRPL+I+SR QATRQELDTS VGPR  LWTEVTDRFRDP H VRKIVDDEQV+HV+PNIIQQPNIS+EK+TKMW+  K +WN   ANWK ESGNNQPWL+FCQG
Sbjct:   75 LVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGE-EGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELED---SAGGXXXX-----XXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQG 319

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BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 6.660e-117
Identity = 202/255 (79.22%), Postives = 217/255 (85.10%), Query Frame = 1

Query:   49 VLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            VLVAALRSLD+NMKRPSPYFDDLDAIAAGKSGRGSEQEEGE EG IPAKALLMFRGV+ MVA+ARD TEPFT EG+DYS  DLYDAM+KE+  EL D   SAGG         XXXXXXXXXXXXXXSGS TERKGPHCMMRLVGILCED IRPL+I+SR QATRQELDTS VGPR  LWTEVTDRFRDP H VRKIVDDEQV+HV+PNIIQQPNIS+EK+TKMW+  K +WN   ANWK ESGNNQPWL+F QG
Sbjct:  236 VLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGE-EGVIPAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPELED---SAGGXXXX-----XXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQG 481

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BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 1.290e-116
Identity = 200/256 (78.12%), Postives = 218/256 (85.16%), Query Frame = 1

Query:   49 VLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSA-ADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            VLVAALRSLD+NMKRPSPYFDDLDAIAAG+SGRGSEQEEGE+EGAIPA ALLMFRGVV MVA+ARDSTEPFT EGVDYS+ ADLYDAM+KED+ EL D   SAG          XXXXXXXXXXXXXXSG+ TERKGPHCMMRLVG+LCED IRPL+I+SR QATRQELD S VGPR  LWTEVTDRFRDP H VR  VDDE V+HV+PNIIQQPNIS+EK+TKMW+  K +WN   ANWK ESGNNQPWL+FCQG
Sbjct:   78 VLVAALRSLDANMKRPSPYFDDLDAIAAGESGRGSEQEEGEEEGAIPASALLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDKPELED---SAGXXXXX-----XXXXXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQG 325

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BLAST of Ec-00_003670.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 2.770e-109
Identity = 190/255 (74.51%), Postives = 212/255 (83.14%), Query Frame = 1

Query:   49 VLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            VLV ALRS D NM RP PY+DDL+AI AGKSGR + +E+ E+EGAIPAKALL FR VV MVA+ARDS  PF  + V+YS ADLYDA+ KEDE   G+   S         XXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCED IRPLLI+SR QATRQ+LDTS+VGPRN+LWTEVT RFRDPDH+VRKIVDDEQV+HVDPNIIQQPNIS+EKL++MWA  K +WN  YANWK ESGNNQPWL+FCQG
Sbjct:  171 VLVQALRSHDGNMNRPCPYYDDLNAITAGKSGRRNGEED-EEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKEDEAGKGN---SXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQG 421

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BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 1.950e-108
Identity = 195/258 (75.58%), Postives = 213/258 (82.56%), Query Frame = 1

Query:   46 DVLVAALRSLDSNMKRPSPYFDDLDAIAAGKSG--RGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            D+LVAALRSLD+NMKR SPYFDDLDAIAAGKSG  RGSEQEEGE+E AIPAKA+  FRGVV MVA ARDSTEPF FE VDYS A+L+DAM+ ED+ ELGD   SAGGSAP G   XXXXXXXXXXXXXXXSGS TERKGPH MMRLVGI CED I PL I+SR QATRQELDTS V PRN+LWTEVTDRFRD  H VRKIVDD QV+HV+PNIIQQPN S+EK+T  W+  +  WN  YANW  ESGNNQPW++F QG
Sbjct:  203 DLLVAALRSLDANMKRSSPYFDDLDAIAAGKSGCGRGSEQEEGEEEAAIPAKAMPTFRGVVNMVAQARDSTEPFIFEDVDYSVANLFDAME-EDKPELGD---SAGGSAPNGGSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQG 456

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BLAST of Ec-00_003670.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 6.730e-108
Identity = 187/255 (73.33%), Postives = 209/255 (81.96%), Query Frame = 1

Query:   49 VLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            VLV ALRS D NM RP PY+DDL+AI AGKSGR + +E+ E+EGAIPAKALL FR VV MVA+ARDS  PF  + V+YS ADLYDA+ KEDE                  XXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCED IRPLLI+SR QATRQ+LDTS+VGPRN+LWTEVT RFRDPDH+VRKIVDDEQV+HVDPNIIQQPNIS+EKL++MWA  K +WN  YA+WK ESGNNQPWL+FCQG
Sbjct:   48 VLVQALRSHDGNMNRPCPYYDDLNAITAGKSGRRNGEED-EEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKEDE---AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQG 298

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BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 3.670e-100
Identity = 192/294 (65.31%), Postives = 210/294 (71.43%), Query Frame = 1

Query:   49 VLVAALRSLDSNMKRPSPYFDDLDAIAAG---------------------------------------KSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQG 813
            VLV ALRS D NM RPSPY+DDL+AI AG                                       KSGR S  EE E+EGAIPAKALL FR VV MVA+ARDS  PF  + V+YSA DLYDA+ KEDE   G              XXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCED IRPLLI+SR QATRQ+LDTS+VGPRNDLWTEVT RFRDPDH+VRKIVDD+QV+HVDPNIIQQPNIS+EKL++MWA  K +WN  YANWK ESGNNQPWL+FCQG
Sbjct:  244 VLVQALRSHDGNMNRPSPYYDDLNAITAGNMRNMEFCSGWGCTPEASSHAKAYSLCGPLSPIPNARAGKSGR-SNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKEDEAGTGXXXXXX---XXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQG 533

[Close]

BLAST of Ec-00_003670.1 vs. uniprot
Match: A0A6H5K6G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6G9_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.240e-94
Identity = 169/223 (75.78%), Postives = 185/223 (82.96%), Query Frame = 1

Query:  124 IAAGKSGRGSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQP 792
            I AGKSGR S  EE E+EGAIPAKA L FR V  MVA+ARDS EPF  + V+YSAADL+DA+ +EDE    D   SAGGSAPTG   XXXXXXXXXXXXXXXSGSNTER GPHCMMRLVGILCED IRPLL +SR QATRQ+LDTS+VGPRNDLWTEVT RFRDPDH+VRKIVDDEQV+HVDPNIIQQ  IS+EKL++MWA  K +WN  YANWK ESGNNQP
Sbjct:  241 IRAGKSGR-SNGEEDEEEGAIPAKAFLTFRNVFGMVAIARDSKEPFKVDNVEYSAADLFDALAEEDEAATAD---SAGGSAPTGGSSXXXXXXXXXXXXXXXSGSNTERNGPHCMMRLVGILCEDVIRPLLTESRLQATRQDLDTSSVGPRNDLWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQSTISAEKLSRMWATAKAKWNQPYANWKSESGNNQP 459

The following BLAST results are available for this feature:

BLAST of Ec-00_003670.1 vs. uniprot

BLAST of Ec-00_003670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSJ6_ECTSI	1.020e-188	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J7W8_9PHAE	9.400e-122	80.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZX9_9PHAE	1.110e-119	79.92	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFU0_9PHAE	6.660e-117	79.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNY9_9PHAE	1.290e-116	78.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU69_ECTSI	2.770e-109	74.51	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5JSN7_9PHAE	1.950e-108	75.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJ39_ECTSI	6.730e-108	73.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KKV3_9PHAE	3.670e-100	65.31	Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5K6G9_9PHAE	2.240e-94	75.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:3837790..3839692 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	531.6
Seed ortholog evalue	2.3e-148
Seed eggNOG ortholog	2880.D7FSJ6
Length	843
Hectar predicted targeting category	other localisation
Gene id	Ec-00_003670.1
EggNOG OGs	2EJXG@1,2SPZB@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_003670	Ec-00_003670	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 3837790..3839692 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003670.1.1	Ec-00_003670.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3837790..3837922 +
Ec-00_003670.1.2	Ec-00_003670.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3838422..3838915 +
Ec-00_003670.1.3	Ec-00_003670.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3839477..3839692 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003670.1	CDS:Ec-00_003670.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 3837790..3837922 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003670.1	Ec-00_003670.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 3837790..3839692 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:3837790..3839692+
coding sequence from alignment at chr_00:3837790..3839692+

mRNA sequence

>Ec-00_003670.1 ID=Ec-00_003670.1|Name=Ec-00_003670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=281bp
MHAPQDSEHVAAEQEDVLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRG
SEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLY
DAMDKEDEEELGDFGDSAGGSAPTGSSSTGGAVGSDGGGSAGGSGSNTER
KGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVT
DRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNP
SYANWKGESGNNQPWLAFCQGKGWVRWGWV*

spliced messenger RNA

>Ec-00_003670.1 ID=Ec-00_003670.1|Name=Ec-00_003670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=843bp|location=Sequence derived from alignment at chr_00:3837790..3839692+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCACGCACCGCAAGATTCCGAGCATGTCGCAGCAGAACAGGAAGATGT
CCTGGTGGCGGCCCTGCGATCTCTCGACAGCAACATGAAACGGCCATCTC
CGTACTTCGACGACCTCGATGCTATCGCAGCCGGCAAATCTGGACGCGGC
AGCGAGCAGGAGGAGGGGGAGGACGAGGGAGCCATCCCTGCGAAAGCACT
GCTTATGTTTCGAGGCGTTGTCAAGATGGTCGCCGTAGCACGTGACAGTA
CTGAGCCGTTTACATTCGAGGGTGTGGACTACAGCGCGGCGGACCTTTAC
GACGCCATGGACAAGGAAGACGAAGAGGAACTTGGGGATTTCGGGGATTC
TGCCGGCGGGAGTGCTCCCACTGGTAGTTCATCGACGGGTGGTGCAGTCG
GATCGGACGGGGGTGGTTCCGCCGGAGGGAGTGGCAGCAACACGGAGCGC
AAGGGCCCACACTGCATGATGCGGCTCGTTGGGATCCTGTGCGAAGACTT
TATCCGCCCACTTCTCATCGATAGCCGCTTCCAGGCGACCCGGCAGGAGC
TGGACACCTCAACAGTCGGGCCGCGGAACGATTTGTGGACAGAGGTCACC
GACCGCTTCCGAGACCCTGACCACAAGGTGAGAAAAATCGTGGACGACGA
ACAAGTGAATCACGTCGACCCGAACATCATCCAGCAACCAAACATCTCGT
CGGAAAAGCTTACCAAGATGTGGGCTGTGGGAAAGGGGAGGTGGAACCCG
TCTTATGCCAACTGGAAGGGTGAATCCGGCAACAACCAGCCATGGCTTGC
ATTTTGCCAAGGTAAGGGGTGGGTGAGGTGGGGCTGGGTATAA

protein sequence of Ec-00_003670.1

>Ec-00_003670.1 ID=Ec-00_003670.1|Name=Ec-00_003670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=281bp
MHAPQDSEHVAAEQEDVLVAALRSLDSNMKRPSPYFDDLDAIAAGKSGRG
SEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLY
DAMDKEDEEELGDFGDSAGGSAPTGSSSTGGAVGSDGGGSAGGSGSNTER
KGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVT
DRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNP
SYANWKGESGNNQPWLAFCQGKGWVRWGWV*

mRNA from alignment at chr_00:3837790..3839692+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_003670.1 ID=Ec-00_003670.1|Name=Ec-00_003670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1903bp|location=Sequence derived from alignment at chr_00:3837790..3839692+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCACGCACCGCAAGATTCCGAGCATGTCGCAGCAGAACAGGAAGATGT
CCTGGTGGCGGCCCTGCGATCTCTCGACAGCAACATGAAACGGCCATCTC
CGTACTTCGACGACCTCGATGCTATCGCAGCCGGTGAGATGCTGGTATTG
TGTACATTCGTCGTCGATTAGAGTCACAGCAGACGGCACAGCGTATTGAC
CAAGTATAGGTAGGTAGATATGCTGCAGTTAAACGCAGTGTGCGCAAAGG
AAAACACAAAATTACTGCTGTGTGTGTAGTGCCCGCTTCCAATCTAACTG
TTCGTACAGCAGAAGGTACGGCATGCTCGAGAGCTGTTTTAATATTTGCC
CCAGTAGGTTGGATGTTGAAGGCACTCACAGCGTACCACACGGCATGCTT
TCTTGATGATATTCAATCGGTGGTGCACCGACCAATACGCTTAAGCTTTG
GGTATTCTGTCCTCTCACGCCCAGAGGAAGTAAGGCAAGGTAAACGATGT
TTTATGGAGGACAGTCGTTAGGAACGTACATGTAGTTTTGCTCCGGTTGG
GCGTGTACACCTGAGGCTTCCTCTCATGCGAAGTCTTACTCATTGTCTGG
GCCGCTTTCTCATATCCCCAACGTCTGCGCAGGCAAATCTGGACGCGGCA
GCGAGCAGGAGGAGGGGGAGGACGAGGGAGCCATCCCTGCGAAAGCACTG
CTTATGTTTCGAGGCGTTGTCAAGATGGTCGCCGTAGCACGTGACAGTAC
TGAGCCGTTTACATTCGAGGGTGTGGACTACAGCGCGGCGGACCTTTACG
ACGCCATGGACAAGGAAGACGAAGAGGAACTTGGGGATTTCGGGGATTCT
GCCGGCGGGAGTGCTCCCACTGGTAGTTCATCGACGGGTGGTGCAGTCGG
ATCGGACGGGGGTGGTTCCGCCGGAGGGAGTGGCAGCAACACGGAGCGCA
AGGGCCCACACTGCATGATGCGGCTCGTTGGGATCCTGTGCGAAGACTTT
ATCCGCCCACTTCTCATCGATAGCCGCTTCCAGGCGACCCGGCAGGAGCT
GGACACCTCAACAGTCGGGCCGCGGAACGATTTGTGGACAGAGGTCACCG
ACCGCTTCCGAGACCCTGACCACAAGGTACGTGCTGGGGGTAGGGGGTTG
ATGAGCACGGATCGGCCGAGAACGTTGTACAAAAGACAGCAGTCGAAAGT
CGTATGCCGTTTATTTATGGATATTTTAGCCATGGTACTCATCACCTCAT
AATAACGTCCATTGACGATCGCCATCGTTTAAGGCAATAAACCTGCTGTT
GTTGACGTCTACCGGTAGCTACGTTGTTGTTGCTGACGCGGACGACCATA
TTGCTGCAGTTGCTTCGTCAGCCTAGAGTGGAAGACGTAAGAAAACGCGC
CGAACTGTTTCAAACGAATGCACAGATAGCCAGACAATACTATTATATAA
TAGGAGTATGACAGAAGAAATAACAGGCCGGGATCAGGCCGACATCGGTC
CTTCCCGCGCGAGAGGTGCATTCCCCGTTCTTTGTTTTTTTCGTATCGAA
GTCGAGGTCAATTCCTCGCACGTCGGGGGGCGGCATCATTGTAGGTACGT
TTAAAGAACACGTGTATGATCTACGTTTCCCCTTCCCTCGCTCCTTCGCT
GTATGCCTGACCTATGGGTAATGTGGACGTTTTTCAGGTGAGAAAAATCG
TGGACGACGAACAAGTGAATCACGTCGACCCGAACATCATCCAGCAACCA
AACATCTCGTCGGAAAAGCTTACCAAGATGTGGGCTGTGGGAAAGGGGAG
GTGGAACCCGTCTTATGCCAACTGGAAGGGTGAATCCGGCAACAACCAGC
CATGGCTTGCATTTTGCCAAGGTAAGGGGTGGGTGAGGTGGGGCTGGGTA
TAA

Coding sequence (CDS) from alignment at chr_00:3837790..3839692+

>Ec-00_003670.1 ID=Ec-00_003670.1|Name=Ec-00_003670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=843bp|location=Sequence derived from alignment at chr_00:3837790..3839692+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCACGCACCGCAAGATTCCGAGCATGTCGCAGCAGAACAGGAAGATGT
CCTGGTGGCGGCCCTGCGATCTCTCGACAGCAACATGAAACGGCCATCTC
CGTACTTCGACGACCTCGATGCTATCGCAGCCGGCAAATCTGGACGCGGC
AGCGAGCAGGAGGAGGGGGAGGACGAGGGAGCCATCCCTGCGAAAGCACT
GCTTATGTTTCGAGGCGTTGTCAAGATGGTCGCCGTAGCACGTGACAGTA
CTGAGCCGTTTACATTCGAGGGTGTGGACTACAGCGCGGCGGACCTTTAC
GACGCCATGGACAAGGAAGACGAAGAGGAACTTGGGGATTTCGGGGATTC
TGCCGGCGGGAGTGCTCCCACTGGTAGTTCATCGACGGGTGGTGCAGTCG
GATCGGACGGGGGTGGTTCCGCCGGAGGGAGTGGCAGCAACACGGAGCGC
AAGGGCCCACACTGCATGATGCGGCTCGTTGGGATCCTGTGCGAAGACTT
TATCCGCCCACTTCTCATCGATAGCCGCTTCCAGGCGACCCGGCAGGAGC
TGGACACCTCAACAGTCGGGCCGCGGAACGATTTGTGGACAGAGGTCACC
GACCGCTTCCGAGACCCTGACCACAAGGTGAGAAAAATCGTGGACGACGA
ACAAGTGAATCACGTCGACCCGAACATCATCCAGCAACCAAACATCTCGT
CGGAAAAGCTTACCAAGATGTGGGCTGTGGGAAAGGGGAGGTGGAACCCG
TCTTATGCCAACTGGAAGGGTGAATCCGGCAACAACCAGCCATGGCTTGC
ATTTTGCCAAGGTAAGGGGTGGGTGAGGTGGGGCTGGGTATAA

Synonyms

The feature 'Ec-00_003670.1' has the following synonyms


Synonym
Esi0235_0006
Esi_0235_0006