Ec-00_003600.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-00_003600.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI) HSP 1 Score: 385 bits (988), Expect = 5.230e-128 Identity = 197/229 (86.03%), Postives = 208/229 (90.83%), Query Frame = 1 Query: 10 ISPPISTLRT-AFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNPLRKKFR 693 + P S+ T AFPGKVVVLAGDTRQLPPVVPNGGEAETTAAS+LSSAYYRDNVEIFHLSKTMRNKDDPR+SKMVDDIG+GVSDIDEAGL TITGVRTE+ALDV IDF FPDDVLQNPSACAKRGIISTHNDSVARVNAAVLAR+NGET TLQGRTMLDH+HLDPDVDDFFRMSQFLNQME S VPSHDINL VGVVV+LCRNLSIDDCLTNGTKVV+ P K + Sbjct: 316 VPPTASSPSTGAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASVLSSAYYRDNVEIFHLSKTMRNKDDPRYSKMVDDIGDGVSDIDEAGLITITGVRTEEALDVAIDFVFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARVNGETYTLQGRTMLDHKHLDPDVDDFFRMSQFLNQMEHSGVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQ 544
BLAST of Ec-00_003600.1 vs. uniprot
Match: D7FRZ0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ0_ECTSI) HSP 1 Score: 338 bits (867), Expect = 1.800e-116 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 Query: 193 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNPLRKKFRH 696 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNPLRKKFRH Sbjct: 1 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNPLRKKFRH 168
BLAST of Ec-00_003600.1 vs. uniprot
Match: A0A6H5KSD8_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE) HSP 1 Score: 268 bits (685), Expect = 1.910e-83 Identity = 144/221 (65.16%), Postives = 169/221 (76.47%), Query Frame = 1 Query: 1 MSFISPPI-STLRTAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVL 660 + F SP I + AFP KV V+AGDTRQLPPVV NGGE+ETTAAS+LSSA+YRDNV++FHL+ TMRNKDDP FSKMVD IG+G + +D GL T+TGV T +L+ IDF FP VLQNP+ACAKRGIISTHNDSVARVNAAVL+R+ G+ TL+GRTMLDHE +DPD S +PSH+I LKVGVVV LCRN+SID LTNGTKVV+ Sbjct: 268 LHFASPSIFAHFLPAFPKKVFVIAGDTRQLPPVVANGGESETTAASVLSSAFYRDNVDVFHLNTTMRNKDDPDFSKMVDAIGDGEAPVDADGLVTMTGVDTALSLESAIDFVFPYYVLQNPTACAKRGIISTHNDSVARVNAAVLSRVQGDMFTLRGRTMLDHEQMDPD----------------SGIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVV 472
BLAST of Ec-00_003600.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51) HSP 1 Score: 124 bits (310), Expect = 9.520e-29 Identity = 76/221 (34.39%), Postives = 117/221 (52.94%), Query Frame = 1 Query: 43 FPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNGV----------SDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNP 675 F GK+V+ AGD RQ+PPVV + S+ + ++IF+LS + RN+DDP +S + +G+ S ++ LT+ T+ L+ +IDF F V+ P CA R I++THN +V +N+ VL R+ E + E+ D+ F + LN+++P VP HD+ LKVG V ++ RNLS D L NGTKV++ + P Sbjct: 755 FGGKIVIFAGDFRQIPPVVVRAKSNSDIINCSVKSSPIWEQIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSHLSYVTD--LNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSEN----TDEIFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTP 969
BLAST of Ec-00_003600.1 vs. uniprot
Match: UPI001ED89BAA (ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA) HSP 1 Score: 120 bits (301), Expect = 9.340e-28 Identity = 81/223 (36.32%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 22 ISTLRTAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNG-VSDIDEAGLTTIT--GVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDP---DVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFN 672 I + AF GKVVVLAGD RQ+PP++P+G +A+ ASL SS + ++ L +R++DD +S+ V +G V + TI + +L +IDF +P DVL NP+ C R I+S N +++ +N VL + GE L + P VD+ S LN + S VP H + LKVG V +L RN+S +D L NGTKV++ + + Sbjct: 253 ICQVEAAFGGKVVVLAGDFRQIPPIIPDGSKADIIGASLKSSELWPIIIKK-KLRSILRSRDDRAYSEFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLSNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRL-----CSADSTPPCAGAVDNTLIHSDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIVEKIS 469
BLAST of Ec-00_003600.1 vs. uniprot
Match: UPI001ED8A18C (ATP-dependent DNA helicase PIF1-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A18C) HSP 1 Score: 119 bits (297), Expect = 3.120e-27 Identity = 81/223 (36.32%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 22 ISTLRTAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNG-VSDIDEAGLTTIT--GVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDP---DVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFN 672 I + AF GKVVVLAGD RQ+PP++P+G +A+ ASL SS + ++ L +R++DD +SK V +G V + TI + +L +IDF +P DVL NP+ C R I+S N +++ +N VL + GE L + P VD+ + LN + S VP H + LKVG V +L RN+S +D L NGTKV++ + + Sbjct: 253 ICQVGAAFGGKVVVLAGDFRQIPPIIPDGSKADIIDASLKSSVLWPIIIKK-KLRSILRSRDDRAYSKFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLCNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRL-----CSADSTPPCAGAVDNTLIHTDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIIEKIS 469
BLAST of Ec-00_003600.1 vs. uniprot
Match: UPI001E68D7A0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0) HSP 1 Score: 113 bits (283), Expect = 5.530e-26 Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 43 FPGKVVVLAGDTRQLPPVVPNGGE-AETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIG-NGVSDID------EAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNP 675 F GK+++ AGD RQ+PPVV + ++ AS+ SS ++ ++ F L + R +DD FS+ + +G N ++ + L ++ + LD +IDF +P+ +L P C R I+STHN SV +NA +L + + +D E + + D F LN+M+P +P HD+ LKVG V ++ RNL+ D L NGTKV++ +P Sbjct: 63 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQK-LKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS---ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSP 276
BLAST of Ec-00_003600.1 vs. uniprot
Match: A0A6H5GVM8_9HEMI (ATP-dependent DNA helicase (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GVM8_9HEMI) HSP 1 Score: 115 bits (288), Expect = 8.860e-26 Identity = 76/221 (34.39%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 22 ISTLRTAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNG----VSDIDEAGLTTITGVRTEQALDVVIDFGFP--DDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDD--FFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVL 660 I+ F GK++V AGD RQ+PP+VP+ + AS+ SS ++ + + +F LS R D FS+ + +G G V DE L + ++T L+ +IDF +P DD ++NP R ++S N ++ +N VL R G+ L + DVDD F + +FL+ + VP HD+ LK+G V + RNLS D L NGTKV++ Sbjct: 1808 ITQCELPFGGKIIVFAGDFRQIPPIVPSNTPVDVVNASVKSSPFWAE-LNVFTLSTAQRTAGDELFSRFLLAVGEGRVEPVRVADET-LIPLRNIQTVSNLNDLIDFVYPPNDDSIENPDLSRSRTVLSGTNAAIDDINRTVLDRCPGDVIHLYSA-----DRTTSDVDDPRFLPLPEFLHSLTHPGVPDHDLQLKIGSVCTVLRNLSFDCGLVNGTKVIV 2021
BLAST of Ec-00_003600.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E) HSP 1 Score: 115 bits (287), Expect = 1.170e-25 Identity = 75/222 (33.78%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 34 RTAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVR---TEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTML------DHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFN 672 R AF GKV+VLAGD RQ+PP++P+G + + ASL SS + N+ L +R+++D ++ V ++G G+ +R +L+ +++F +P DVL NP C +R I+S N ++A +NAAVL + E L D+ H+ DV LN + + VP H + LKVG +V+L RN+S D L NGTK+ + + + Sbjct: 1216 RQAFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLW-PNIIKKRLRTILRSREDQDYTDFVLEVGENKVPSISIGIYRPIPLRMIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHTDV---------LNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFVEKIS 1427
BLAST of Ec-00_003600.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66) HSP 1 Score: 113 bits (282), Expect = 5.270e-25 Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 43 FPGKVVVLAGDTRQLPPVVPNGGE-AETTAASLLSSAYYRDNVEIFHLSKTMRNKDDPRFSKMVDDIG-NGVSDID------EAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNP 675 F GK+++ AGD RQ+PPVV + ++ AS+ SS ++ ++ F L + R +DD FS+ + +G N ++ + L ++ + LD +IDF +P+ +L P C R I+STHN SV +NA +L + + +D E + + D F LN+M+P +P HD+ LKVG V ++ RNL+ D L NGTKV++ +P Sbjct: 919 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQK-LKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS---ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSP 1132 The following BLAST results are available for this feature:
BLAST of Ec-00_003600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_003600.1 ID=Ec-00_003600.1|Name=Ec-00_003600.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=233bpback to top spliced messenger RNA >Ec-00_003600.1 ID=Ec-00_003600.1|Name=Ec-00_003600.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=699bp|location=Sequence derived from alignment at chr_00:3594761..3595459+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGTCGTTCATCTCCCCACCGATCTCTACTCTTCGTACAGCCTTTCCTGGback to top protein sequence of Ec-00_003600.1 >Ec-00_003600.1 ID=Ec-00_003600.1|Name=Ec-00_003600.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=233bp MSFISPPISTLRTAFPGKVVVLAGDTRQLPPVVPNGGEAETTAASLLSSAback to top mRNA from alignment at chr_00:3594761..3595459+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_003600.1 ID=Ec-00_003600.1|Name=Ec-00_003600.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=699bp|location=Sequence derived from alignment at chr_00:3594761..3595459+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:3594761..3595459+ >Ec-00_003600.1 ID=Ec-00_003600.1|Name=Ec-00_003600.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=699bp|location=Sequence derived from alignment at chr_00:3594761..3595459+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_003600.1' has the following synonyms
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