Ec-00_003560.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003560.1
Unique NameEc-00_003560.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length359
Homology
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BLAST of Ec-00_003560.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 707 bits (1824), Expect = 2.600e-248
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 3 
Query:   33 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 1106
            MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC
Sbjct:    1 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 358
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BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 697 bits (1799), Expect = 4.910e-243
Identity = 353/358 (98.60%), Postives = 355/358 (99.16%), Query Frame = 3 
Query:   33 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 1106
            MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKT EVEKLLI+LILDRRLNGKI+QIEGFLLLDGP ET TSRKHDAMERWSNSLRSLSSFVAARVEC
Sbjct:   93 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVEC 450
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BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 424 bits (1089), Expect = 2.510e-136
Identity = 205/354 (57.91%), Postives = 272/354 (76.84%), Query Frame = 3 
Query:   42 RYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVE 1103
            +Y+EL  ++  VTRNE +D+VN ILD VS + DL  +++MYE TL+ALK   NERMWF T  KL +V+LQ  DY  VQ  ID  H SC L +G DDP+KG  LLEVY + IQLCTAT N   M+EVYPKT++LNA+V DPRIMGVIRE+GGKM+M+ G W +AYNEFYEGFR++QEAGN  A+ CLKYVVLANML LS INPFAAREAKV+QE++EI AMM LR AY+ N+LAKFERTL + RNRI +DPF+M+Y+ PLR ++RE VLI L +PY K++M F++ EL ++  EVE+L++++ILD R  GKIDQI G L+L G  ++  ++K++A++RWS++L  L + +  +++
Sbjct:   95 KYQELFKYLGDVTRNECTDAVNAILDAVSAATDLAFLTKMYELTLAALKRAANERMWFGTLCKLGRVHLQQEDYSGVQRVIDEAHRSCLLPDGSDDPAKGTSLLEVYALEIQLCTATRNAARMREVYPKTLNLNAAVADPRIMGVIREEGGKMHMAAGRWAEAYNEFYEGFRSHQEAGNARARDCLKYVVLANMLALSDINPFAAREAKVYQEDREITAMMALRQAYDANELAKFERTLREDRNRILDDPFIMSYIEPLRHKMREQVLISLVQPYNKVSMKFLSQELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKIQ 448
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BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 7.840e-136
Identity = 212/361 (58.73%), Postives = 277/361 (76.73%), Query Frame = 3 
Query:   33 MQQRYKELLTHVSS--VTRNESSDSVNGILDTVSVS---EDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 1100
            M +RY E+L ++S+  VTRNE +DS+N IL+ VS +   +D+  +S+MY+ TL+ALK   NER+WFNTYVK  K YLQ  DY +V   +  LH SC+L +G DDP+KG  LLEVY + IQLCTAT ++  MK++YPKT++LNA+V DPRIMGVIRE+GGKMYMS   W  AYNEFYEGFR +QEAGNP AK  LKYVVLANML LS INPF+AREA  +QE+ EIVAM +LR AYE NDL  FE+TL DK N+I  DPF+MTY+ PLR+R+RE VL+ L +PYK+I + F+A EL L+   VE LL+D+I+D+R++GKIDQI+GFLLL G   + +S+K+DA+E+W  +L SL++ ++ARV
Sbjct:  112 MVKRYNEMLQYISNSAVTRNECTDSINSILEAVSANSSAKDVPFLSKMYDITLTALKTANNERLWFNTYVKYGKAYLQSKDYNQVNRIVQELHRSCQLPDGTDDPTKGTYLLEVYALEIQLCTATKSSSRMKQIYPKTLNLNAAVADPRIMGVIREEGGKMYMSESRWDDAYNEFYEGFRGFQEAGNPRAKDALKYVVLANMLALSEINPFSAREAIAYQEDPEIVAMRNLRSAYEANDLGSFEKTLLDKSNKIIADPFIMTYVEPLRRRMREQVLLALLRPYKRIRIEFVAQELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARV 472
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BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 5.430e-125
Identity = 205/352 (58.24%), Postives = 257/352 (73.01%), Query Frame = 3 
Query:   42 RYKELLTHVS--SVTRNESSDSVNGILDTVSVS----EDLRMVSQMYETTLSALKEE-GNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSL 1076
            R++++L ++S  SVTRNE + S+N +L+ VSV+    E+  M+S++YE  L+ LK+   NER+WFNT V+  K  L   D  +V+  +  LH SCRL +G DDP+KG  LLEVY + IQLCTAT +   MK +YPKT++LNA+V DPRIMGVIRE+GGKMYM+ G W +AYNEFYEGFR YQEAGNP AK  LKYVVLANML LS INPFAAREA  FQEEKEIVAM  LR AYE NDL  FE TL DK NRI EDPF+MTY+ PLR+R+RE VL+ L +PY +I + F+A EL L   EVE+L++D+IL+ R+ GKIDQI+GFLLL         +K DAM  W+ SL +L
Sbjct:  135 RFRDMLGYISNASVTRNECTSSINSVLEAVSVAPQGRENTPMLSKIYEIALTTLKQSVNNERLWFNTCVRYGKACLAAGDVAQVRKAVADLHASCRLPDGSDDPAKGTYLLEVYALEIQLCTATKDTARMKALYPKTLNLNAAVADPRIMGVIREEGGKMYMAEGRWNEAYNEFYEGFRGYQEAGNPRAKDALKYVVLANMLALSDINPFAAREAIAFQEEKEIVAMRSLRTAYEANDLTTFESTLKDKSNRILEDPFIMTYVAPLRRRMREQVLLALVRPYHRIQLSFIARELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEAL 486
[Close]
BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 382 bits (981), Expect = 8.550e-121
Identity = 196/356 (55.06%), Postives = 252/356 (70.79%), Query Frame = 3 
Query:   33 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 1100
            M +RY+E+L +VS VTRNE +DS+N +LDTVS   DL+ V ++Y  TL ALK  GNER+WFNT  KLAK YLQ  D+     TI  LH +C  A+G DD SKG  LLEVYG+ IQLCTAT +   M+EVYP+ + LNA                 MYM+ G W  AYNEFYEGFRNYQEAGN  AK CLKYVVLANML LS INPFAAREAKV+QEEKE+ AMM+LRMAYE NDLA+FE+TL +K NRI +D F+M Y+ PL++R+RE VL+ + +PY++I + FMA EL+L    VE LL++LILD RL+G IDQ++GFL +       + +K++A+  WS+ LR  ++ + +R+
Sbjct:   69 MLERYREMLGYVSRVTRNECTDSINQVLDTVSACTDLKSVGEVYRLTLGALKSGGNERLWFNTKAKLAKAYLQGGDFAAADHTIAELHRTCTGADGADDQSKGTYLLEVYGLIIQLCTATKDTARMREVYPRVMQLNA-----------------MYMATGQWSMAYNEFYEGFRNYQEAGNKRAKDCLKYVVLANMLALSDINPFAAREAKVYQEEKEVAAMMELRMAYETNDLARFEKTLQNKANRILDDNFIMAYVEPLKRRMREQVLLAIVRPYRRINLAFMARELNLPEPAVEGLLVELILDERLSGSIDQLQGFLQVGEDDADNSPKKYEALMGWSDELRKATTALTSRI 407
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BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA)

HSP 1 Score: 380 bits (977), Expect = 8.780e-121
Identity = 183/321 (57.01%), Postives = 252/321 (78.50%), Query Frame = 3 
Query:   42 RYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLD 1004
            RY+ +L ++S+VTRNE ++++N ILDT++ + D+ ++S+MYE TL ALK   NER+WFNT +KLAKVYL+     +V   I  L ++C+   G DD SKG  LLE+Y + IQLC  ++N++ MK++YPKT++LNA+V DPRIMG+IRE+GGKM MS GNW  AYNE YE FRNYQEAGN  A+  LKYVV+A+ML +S INPFAAREAKVF ++KEIVAM DLR   E NDLA+FERT+ +K+N+I ++PF+MTY+ PLR+R+RE VL++L +PYKK+T+ F+A EL+L   EVE LL+D+ILD++L+  IDQI+G ++L+
Sbjct:    2 RYRSMLNYISAVTRNECTEAINIILDTLATATDMTVLSEMYEITLLALKASNNERLWFNTNLKLAKVYLEEGKLQEVDRLISALKETCKTPEGNDDLSKGTLLLEIYCLEIQLCAVSHNSLRMKQIYPKTMNLNAAVADPRIMGIIREEGGKMQMSEGNWEDAYNELYESFRNYQEAGNARARDILKYVVVASMLTVSDINPFAAREAKVFSDDKEIVAMSDLRQCLEANDLARFERTIKNKQNKILDEPFLMTYIQPLRRRMREQVLLNLTRPYKKVTVAFLARELALNVDEVESLLVDMILDQKLSAHIDQIKGHVILE 322
[Close]
BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A7R9YB37_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB37_9STRA)

HSP 1 Score: 376 bits (966), Expect = 3.760e-118
Identity = 182/355 (51.27%), Postives = 258/355 (72.68%), Query Frame = 3 
Query:   42 RYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLET-TTSRKHDAMERWSNSLRSLSSFVAARVE 1103
            RY++++ ++S VTRNE +DS+N +LD+VS +  L  +  +YE TL ALK   NER+W NT +KL +V+L+  +Y +V      L ++CRL +G DD  KG+ LLE Y + IQLCT T+N   MKE+YPKT  LNA+V DPRIMG+IRE+GGKM+M +G+W +AYNEFY  FRNYQE GNP AK CLKYVVL+NML LS INPFAAREAKVFQ+++EI+AMMDLRMAYE +D+  F+R L +K N+I ED ++  ++  LR R+RESVL+ + KPY +I M  +A EL++++  VEK++++LILD R+ G+IDQ+ G ++LD   E  T  ++++ +  W  +L   +  + A+V+
Sbjct:   91 RYRQMMEYISMVTRNECTDSINKVLDSVSNNTSLANLQSVYEITLQALKNANNERLWLNTNIKLGRVHLEAKNYSRVAEIARELQEACRLPDGTDDLPKGSYLLEAYALEIQLCTQTHNTSRMKEIYPKTEALNAAVADPRIMGIIREEGGKMFMGLGSWSEAYNEFYAAFRNYQEGGNPRAKTCLKYVVLSNMLALSDINPFAAREAKVFQDDREIMAMMDLRMAYESSDMQGFDRILQNKSNKILEDEYLKMFVERLRNRMRESVLLAMVKPYVRIEMRSVAQELNIESDAVEKIVVNLILDGRVKGRIDQVHGCIILDKGTEAQTVGKEYEGLRGWCKALHDFNEHICAKVQ 445
[Close]
BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A7S1XNF2_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNF2_9STRA)

HSP 1 Score: 372 bits (954), Expect = 2.870e-116
Identity = 185/358 (51.68%), Postives = 257/358 (71.79%), Query Frame = 3 
Query:   33 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLD--GPLETTTSRKHDAMERWSNSLRSLSSFVAARV 1100
            M + Y+++L ++S VTRNE +DS+N +LD+VS    L  + ++YE TL ALK   NER+W NT +KL +V+L+  +Y +V      L  +CRL +G DD +KG+ LLE Y + IQLCT T+N   +KE+YPKT  L+A+V DPRIMG+IRE+GGKM+M +  WG+AYNEFY  FRNYQE GNP AK CLKYVVL+NML LS INPFAAREAKVFQ+++EI AMMDLRMAYE ND+  FER L +K N+I ED ++  ++  LR R+RESVL++L KPY +I + F+A EL+L+ A VE +++ LILD R+ GKIDQ+   ++LD  G      ++ ++ +++WS +L  L+  +  +V
Sbjct:   95 MLEMYEQMLAYISMVTRNECTDSINKVLDSVSSGTSLVHLQKIYEVTLQALKSANNERLWLNTNIKLGRVHLEAKNYGRVADIARELQVACRLPDGSDDVTKGSYLLEAYALEIQLCTLTHNTPRIKEIYPKTEALSAAVADPRIMGIIREEGGKMFMGLSQWGEAYNEFYAAFRNYQEGGNPRAKTCLKYVVLSNMLALSDINPFAAREAKVFQDDREITAMMDLRMAYESNDMPGFERVLSNKSNKILEDDYLERFVERLRYRMRESVLLNLVKPYVRIGLDFVAAELNLEAAAVEDIVVRLILDGRVAGKIDQVRRCIVLDRGGAAGAAIAKDYEGLQKWSKALFDLNDSLGLKV 452
[Close]
BLAST of Ec-00_003560.1 vs. uniprot
Match: A0A7S4ECH3_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECH3_9STRA)

HSP 1 Score: 359 bits (921), Expect = 1.840e-111
Identity = 181/360 (50.28%), Postives = 248/360 (68.89%), Query Frame = 3 
Query:   33 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDL---RMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVE 1103
            M  RY E+LTH  +VTRNE  D VN +LD ++  +      ++ +M+  T SALK   NER+WFN  VK  K++L   D+  V+  +D L  SC+  +G DD SKG  LLE Y + I LC AT +   MK +YP+T++LNA+V DPRIMGVIRE+GG+M+M   N+ +AYNEFY GFR YQEAGN  AK CLKYVVLANML LS INPF AREAK +QEE E+ AM  LR++Y+ NDL +FE TL DKRN I  DPF+M Y+ PLR+R+RE VL+ L KPY+++ + F+AG+L L  ++VE++++ +ILD R+ G++D +E  L+L G  E    +KH  + +W+ +L SL+  +A R +
Sbjct:   93 MASRYAEMLTHAQTVTRNECGDGVNAVLDALADPQSQCSDEIMRKMFAITFSALKSSSNERLWFNCNVKAGKLHLARGDHNAVRQVVDELKKSCQKPDGTDDSSKGTSLLEAYALEISLCAATRDARRMKRIYPRTLNLNAAVADPRIMGVIREEGGRMHMRDANFAEAYNEFYAGFRAYQEAGNSRAKDCLKYVVLANMLALSDINPFDAREAKAYQEETEVAAMRRLRVSYDANDLRQFETTLTDKRNNIQSDPFLMEYVDPLRRRMREQVLLSLVKPYRRVKLDFLAGKLQLSESDVEQIVVAMILDDRIEGEVDMLEKHLVLSGKEE---GKKHRELAKWAGALESLAKGMANRAQ 449
The following BLAST results are available for this feature:
BLAST of Ec-00_003560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI2.600e-248100.00COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE4.910e-24398.60COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6V1ITC2_HETAK2.510e-13657.91COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2BKS2_9STRA7.840e-13658.73COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S2W4K8_9STRA5.430e-12558.24COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A836CJA4_9STRA8.550e-12155.06COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A7S3M6V7_9STRA8.780e-12157.01COP9 signalosome complex subunit 2 n=1 Tax=Spumell... [more]
A0A7R9YB37_9STRA3.760e-11851.27COP9 signalosome complex subunit 2 n=1 Tax=Pinguio... [more]
A0A7S1XNF2_9STRA2.870e-11651.68COP9 signalosome complex subunit 2 n=2 Tax=Phaeomo... [more]
A0A7S4ECH3_9STRA1.840e-11150.28COP9 signalosome complex subunit 2 n=1 Tax=Pelagom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3531472..3541939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score709.5
Seed ortholog evalue7.8e-202
Seed eggNOG ortholog2880.D7FRR5
Preferred nameCOPS2
Length2731
KEGG koko:K12176
Hectar predicted targeting categoryother localisation
Gene idEc-00_003560.1
GOsGO:0000003,GO:0000122,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007399,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008180,GO:0008230,GO:0008231,GO:0008283,GO:0008356,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0014706,GO:0016043,GO:0016070,GO:0016333,GO:0016922,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0023052,GO:0030154,GO:0030163,GO:0030182,GO:0030582,GO:0030584,GO:0030718,GO:0030727,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031935,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0035914,GO:0036099,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044798,GO:0045892,GO:0045934,GO:0046483,GO:0046983,GO:0048134,GO:0048135,GO:0048138,GO:0048140,GO:0048142,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048609,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051427,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060537,GO:0060538,GO:0060968,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0080090,GO:0090052,GO:0090054,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902275,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein deneddylation
EggNOG OGsCOG5159@1,KOG1464@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003560Ec-00_003560Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 3531472..3541939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003560.1Ec-00_003560.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 3533093..3541906 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003560.1.9Ec-00_003560.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3531472..3533305 -
Ec-00_003560.1.8Ec-00_003560.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3533875..3534100 -
Ec-00_003560.1.7Ec-00_003560.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3534668..3534747 -
Ec-00_003560.1.6Ec-00_003560.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3535410..3535502 -
Ec-00_003560.1.5Ec-00_003560.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3536134..3536214 -
Ec-00_003560.1.4Ec-00_003560.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3537565..3537741 -
Ec-00_003560.1.3Ec-00_003560.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3538058..3538147 -
Ec-00_003560.1.2Ec-00_003560.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3539568..3539675 -
Ec-00_003560.1.1Ec-00_003560.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3541898..3541939 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0035603UTR:Ec-00_003560.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 3531472..3533092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003560.1CDS:Ec-00_003560.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 3533093..3533305 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0035605UTR:Ec-00_003560.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 3541907..3541939 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003560.1 ID=Ec-00_003560.1|Name=Ec-00_003560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=359bp
MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSA
LKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDP
SKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIR
EQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDL
SRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRIT
EDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKL
LIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSS
FVAARVEC*
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spliced messenger RNA

>Ec-00_003560.1 ID=Ec-00_003560.1|Name=Ec-00_003560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2731bp|location=Sequence derived from alignment at chr_00:3531472..3541939- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GGAATTCATTTCCTGCTGAGGGAGTTCGACCAGATGCAACAGAGGTACAA
GGAGCTGCTGACGCACGTGAGCTCTGTGACAAGAAATGAGAGCTCGGACA
GCGTGAACGGCATCTTGGATACAGTGTCGGTTTCGGAAGACTTGAGAATG
GTGTCCCAGATGTATGAGACGACCCTTTCGGCCTTGAAGGAGGAGGGGAA
CGAGCGAATGTGGTTCAACACCTACGTCAAGCTTGCCAAGGTGTACCTGC
AAATCCCCGATTACGTCAAGGTCCAGACGACCATCGACACCCTCCACGAC
TCGTGCCGATTGGCCAACGGTCAGGACGACCCCTCCAAGGGGAACCAGCT
GCTGGAGGTGTATGGCATCACCATTCAGCTGTGCACGGCCACCAACAACA
ACATCCTCATGAAGGAGGTGTACCCAAAGACGATCGACCTCAATGCGTCC
GTGGAAGATCCTCGAATCATGGGCGTCATCAGAGAGCAGGGGGGAAAGAT
GTACATGTCGATGGGGAACTGGGGCCAGGCGTACAACGAGTTTTACGAGG
GGTTCCGGAACTATCAGGAGGCGGGGAACCCTAACGCGAAGGTTTGTCTC
AAGTACGTGGTTCTGGCGAACATGCTGGACCTTTCGCGCATCAACCCTTT
CGCGGCAAGAGAGGCAAAAGTGTTCCAGGAGGAGAAGGAGATCGTGGCGA
TGATGGACCTGCGCATGGCGTACGAGGGGAACGACCTGGCCAAGTTCGAG
CGGACGCTGCACGACAAGCGCAACCGCATCACGGAGGACCCCTTCGTTAT
GACGTACCTGGGACCCCTCAGGCAGCGCATACGGGAGTCGGTGCTCATCC
ACCTCTGCAAGCCGTACAAGAAGATCACCATGGGGTTCATGGCGGGGGAG
CTGAGCTTAAAGACGGCGGAGGTGGAGAAGCTGCTGATCGACCTCATCTT
GGACCGCAGGCTCAACGGCAAGATCGACCAGATCGAGGGCTTCTTGCTGC
TGGACGGGCCACTGGAGACGACCACCTCCCGCAAGCACGACGCCATGGAA
CGGTGGAGCAACTCCCTCCGATCCCTCTCGTCCTTCGTGGCGGCGAGGGT
CGAGTGCTAGCCGGTTGTGGTGGTTATGTTTTTTTAGCGCACACACGACG
CGGCTTGTGTCTTGTTGAGAACCTGGTGTGGGGCTAGGGTTCCAATCTCG
CAGCATGTCCTTGTCTCTTCCCCTCTCCTCCTGAACTCGGGCAGGTCTTG
CGTGGTGATACTGTCGGGTTTTTTTTGTTTTTTGGTCTCTCTCTCCACCT
CGCCGTCGTCTCTTTCTTTGTTGGCTCGCTTGCGGTTGGCGCGGGTCTTC
TGTTGTTTATGCTGTTGTCGTCGGTGGTGTTTTTTGGTGTCATCTTTTGT
ATTGGCTGTTTGGTTCCGTAGAACGTTCTCCTGCTTCTCTGGAGATGAGA
CAACGGTACGTGTTGTTAATCCCCCGCCCCCAGGCGATTGTGTCTCGAAG
TCTCCCCCCTCCTTTTCACGTGGGCTACATGGAAATAGGGGTCACGTTTA
TCAAATGCGATAGTATGGCTGTGCATGACCACGGATGGGGGTCCGTTTTC
ATGCCCACCGTTTTCGCTCCCGCTTGCTTCTCTGCAGGCATCTGGGCGGG
GTAGCACCGGACGGGACTTTTTTCTTTTTCTTCCCTTGTCTACCCCGTGG
CAATATCACATCTTGTTTACCCTGTGTTCACCTGGAAATTGGCGTGGCCG
GCCGGTTGCAGGGCACACACTTGTTCGTTGGTGGATGATGCAAACATGAA
GGAAGGCAGACAGCAAGTATATAGCAGTGTGGACAACTACCTCTACCTGT
ATCCATGTAGCAGTGATCTTGTTCGTCCGCGTACAAAGAGAAAAGGACGG
GGGGGCGACCGGTGCTGTGCCATTGAGCTCGTTCTGGATACGAGCATTTG
CTGCGGTCCTTGTCGACCCTCGTGTGGGTGGTTCCACGGTTTCTGTACCA
ACAATTTTGCGGGATTTTCTGTTTCGCCTCTCAACGGGACGGGTGGGATG
ATTTCGTGGGCTCTCTTTTTCCACTCCACGGGACGGGCTGTCATACCATG
ATTCCGCGGCTCTCTCACTCTCACGAGGGGGATTCGTTGCATGGCATGGG
TGGGGGCTGTCTGGCAGATCGTATGCAAATAAATCACTCGTTGACGTCGG
ACCGACGGTGCTGACAAGGAGCAGGCTCCCGTCGACACGGCGTGGACGGT
CGGTGTGCTCATCAGGAACGGCTTCTTCGTCGTCGGCGGTGGGCGATGTC
AACTGCTAGAGTTGGTTAGGCTTGACGCGCGTTCATCGTTGAGGTTAGCA
CCGGGGGGAGGGGGAGGGGAGGGGGTGAGAACGCCCCGCTCTTGTGTGTC
TGTCGTAGAGCTAGTTCTGTGGTGTTTTCTGGGGGTGAGGTGTGTAGTAT
GTCGTTTTTTGGTTTTTTGTATGCACGGGTCCCCACGAATTTGAACTTCT
TGAGGGGATGTGGGGTCTGGAGCTAGCTGCCTCGCGAGTTGGACGTTGTG
GTTCCATCGTGTGGATCTATTCTTGTTTGTGGCGAGTTTTGTACTCTCGT
TTCTGTCGTCCTCTTGTCGGGATGGGCTTTCCTTGGTTTGGTAGAGGAAG
GGAGGGAGAAGAGACTGCCAGCAGTTCTCGTTCGATGTTCAAAGTTGGAT
TGCTTGACTTGAGTGCAGTCGAGGGGGGGGG
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protein sequence of Ec-00_003560.1

>Ec-00_003560.1 ID=Ec-00_003560.1|Name=Ec-00_003560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=359bp
MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSA
LKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDP
SKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIR
EQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDL
SRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRIT
EDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKL
LIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSS
FVAARVEC*
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mRNA from alignment at chr_00:3531472..3541939-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003560.1 ID=Ec-00_003560.1|Name=Ec-00_003560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10468bp|location=Sequence derived from alignment at chr_00:3531472..3541939- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GGAATTCATTTCCTGCTGAGGGAGTTCGACCAGATGCAACAGGTAGAGGG
GTGGGGTTGGGGGGGGGGGGCGTGCTCTTATGTTTTGCATGCCTTAGCGG
TTAGACCGTTGACCACGCGTCGTCCTCGAGAGGACGGAACATTGTTCCCA
CAGGACCAATCACCGATGGCCAATCGTTCCTTCCTATTTTGCCAAAGGTG
GCTCAAAAAGTCTTCTGTAGTCCATCTATCCTGACGATTTCCCTGCCCGC
CTGTTCAAACCACTTCCTACTCCCCAGTACAGCTACCGCCTTCTCCTCTC
TACTCCATACCTCAAACATCTCCCTATACCTCCCTTGTATTTTTCCCAGC
TCAGTCATGTGCACTTCCCTCTCCTTTTCGTACCACGGACATTCCGCGAC
TACATGAACAAGGTCTTCGCATTCGCGTCCGCAATCACATTTGAACTTGT
CGTCTTCGTCGTCTACCGTCCTATGTCTTCGTCGATATTCTCGAAGGTCC
ATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACA
TTAAAAACCGTTCCGATCTCTCTCTACCCAGTACCTTCGTATGTCCGTAC
TGATCCAACACTCGACGCGGTCGATTCCCGTGGTCACAGGTTAACTTACC
CTAAAAAGGTACACTCAAATAAACTGGCCCCGAGGGGTCCGCAAGTCAAT
AGAAATCAACGACAGATATTCTGGGATCCTCCGCTCCCTCTTCGCGCTAT
GCGGGGTATCAACTGAGATTAGCAGTTCGGTAATCCTTGAACCCTATTCC
TTCTTTCAACATTCCGTACACTTCTAGACCCTCCTTGTCCTTGGTTTCTT
TCCTTCGATTCTGTTCTTCTCTCTCGGCACAAGCAACAGATATCTTCTCC
TTGAACCCCTGTAGACCCTCCGTTTCCAGCGTTTCATCTTCGTCGATTTC
GAACCCCTTCCATATGTCCTCTACAACCTTGACCCATTCCGTGGGTTGTC
TACCCCTCTTTTTGTTTGCCCACTTCGCCTCCCATGCTATTCTCGGCAAC
CTCTCCTCTCCCATCCCGCACATGCGATGCTGCCATGTCAGCTTTCTTGC
GTCTCTTCCCGACCGTAGGGATTGCATCCCCAATTCTGCCCTGACGGCTG
CATTACTTGTGCGCTTGGAGCATCCTAGGACGATGTTCGCTGCTTTCATC
TGCGCCGCCTCGAGTTCTTTCACTACCTTTTTATATTTCCTTCCCATGGT
TCTCCGGTGTACTCTAGCGGCGGTACGATTACGCTCTTCAAAACCGTCAG
TTTGATGCGTGTATCGAGGTGCCGGTTCGCGAGTATTGGGTGCAGCTTCC
CTGCTCGTGCTTTGCCCTTTTCCGCTACCTTGGACATGTGTGCATTCCAC
GAGCAGTCTTTTGCGATCTCTACTCCGAGGTATGTGCACTGGTCCACTAC
TGCACTCTCCTCGAACCCCCCACTCCCATCTATATTCTACTGGTTCCTCC
CTGTCCTCGTTGCATACCATAACGGCACTCTTCTTAACGTTGGCAGACAA
ACTCCACTTGTCAGTAAACTTCTTCGCCGCGTCAATTTGCAGTTGCCTGC
CTTTTTTGCTTTTTCGATGAATGTTTTTAGGAGGTATACTTACAATCAAT
GACACGTTACGTACAGTACCCATTGGAGGCCTAGCCACAGCAGTAGTCGA
AGGGGGGGGTGTTTTTGCCATTGTCCTCTGCATGATGGGGCGTTCAACGT
GTCTCGGTTTTTTCCGCTGCTGGTGTGCTGTATGGATGTGGCCCCCCAAG
GGGGTGGTCGGTACAAAAGGACAATTCGCACGCGTGGCAGCCAGACCCTG
CGAGCGCCGCCGTGTTGCTCCCATTGGTGTGCCTGCCGGAGGAGGCATCT
TCCATGCCTCTCATACGCCACACCCATCGCACGCCGCACCCTATCCCACG
TAGAGAAGCGGCGGCTTGAGGGACGCGTGACACACGCACATCAGTCGAGT
TTTTTTTTTCTTTTGCTCGTTGTGGTCGTGGCGTGTGTCTTGCCCCATTG
GTCTCGCGTGAGCATGCTTTGGAGTGTTTTTCGTCTCTTTTTTTTTAATA
CTTCCGGTTGCGCGTTTGGAGCAAGATACATGTGAACTGTAAAGACTGGC
AGCATGAGACACGCACCACAAAGTATACTTTTCCCTTTGCATACCTGGTC
CTATTTTTTCATTTGCGAATTAATTGGTGGCGATTTTTTCCTTGCTGTTT
TTGCTCTCCACCAGAGGTACAAGGAGCTGCTGACGCACGTGAGCTCTGTG
ACAAGAAATGAGAGCTCGGACAGCGTGAACGGCATCTTGGATACAGTGTC
GGTTTCGGAAGACTTGAGAATGGTGAGTCATGACATCCACGGCGGAGAAG
CCGGGGGGGGGGGGGGGGGGGGGGGGCAAAATTAAAAAACAAAAAGGGGG
GTTTATTTTGGGGGGGGGGGGCAACTTTCAAAAATTTTGGAAAGAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTA
AAAAATAAAAAGGGGGGGATTTTTTTCCTCTTTTTTTTCCCCCCCCCCCA
AAATAAAAAGGGATGTTTCCCCACCGGTTTTTTTTTAAAAAAAAAAAATG
TTCCGCCCTCGGGAGGCCATTTTTGGGTAAAGGGTTTTTTTTGGAAGCCT
TGAAAAAGGTGGGGGCACCCCCCCCCCCCCCAACACCCTTGGGGGGGGGG
GGGGGGGGGGGGCGACGATTCAACGACAGAGCTGGGCGTTACGTTTGGGT
GGTGTCGGGACATTCAAGAATTGTTGGACAGGAGGCGTCGATTTTTTAGG
AGCGGGTGCACGAAGTATATGATTTTCATAGAGAGGGTGGGGAGTATTGG
CTGCTGGGGGGGGTGCTCATAGTCGTGCATGCCGTAGTAGTTAAACCATC
GACCTCACATCCCTACAAAGCCGCGACGGAGCACGCCGGGTTCTCACCGG
ACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGAG
TCGCATGAAGGGTGCGCTGCATCCTGCTAAGTTTGGCATCTTGTGCTTAC
TTCCTTGCGTACGGATGACAGCTGCGTATGACTTAATTTATTTTCTGGTG
CTTTCACTTCCGGAGACAGTTGTAAGCACTGTGTAACTGCCTCGAGGATG
CTTGACCATTTTAACACAACGTGGTGCCATCATCCCCCTTGCGCGGAGTG
AGGTTTCTCGACCCCGCACAACATGATCTACTCGACCACCATTACGGTTA
CCGCAAAAAAGTACAGAGGTAAAAAAGGTAACCTGGTTGCCGAGTTCACG
AAGTGAATTGGCTTGTTCTACAACGTCGTTGCCAAGCGACGAAAACCCAA
TCCCGATGGCAAACACCGGGCACGAAGTGTATGATTTCATAGAGAGGGTG
GGAGGGGGTGGAGAGTATTCGCTGCTGGGGAGGGTGGTAAGGATGTAAAA
CAACGATGCACTCTAGGTTTTATCGTCAGAAGAGTGAGAGCGCCGACCGA
TCGCTTGATCATGGGTAAATCATGCAGTTGTTGTCATGTGTGGGGATAGC
TTCGAGTACGACTTCAAGGAGGCGAACGTGACTCTCGACACGCGACGAAA
AAAGCGACACACTGCTGTGCCCGATACGCGTCCCCATGTCCCTCCGCTTT
CCTCCAACCGTGTTTGGTGGTGGTGGTGACGTGATACGACAGGTGTCCCA
GATGTATGAGACGACCCTTTCGGCCTTGAAGGAGGAGGGGAACGAGCGAA
TGTGGTTCAACACCTACGTCAAGCTTGCCAAGGTAGGTACCGTGTGTTGG
AAGAAAATGCCGCTTCAGTGGTGCAGACGACCGTCGATGTCTCTACCTGG
TCGCGGGGTGATGGCGTCGACCATCTGCCTTTCTCGAGGCTGCTGTTCGC
TTCTTCTTGTAGATTTGTTCCGTTCAGCACGATACCTTTCGAATACAGAA
AAACCATCAAGCCAACCGGCAGAGGTGATGTACTCACACACACTATACAA
TGCACGCCCCCGGCCGGAACGAGCGTTGCACTGCACGCGCGTCGCTTTGA
ACGTTACTTTTTTTTTCTTTTTTTTTCCCTCCCGAATACCGCAAACAGGT
GTACCTGCAAATCCCCGATTACGTCAAGGTCCAGACGACCATCGACACCC
TCCACGACTCGTGCCGATTGGCCAACGGTCAGGACGACCCCTCCAAGGGG
AACCAGCTGCTGGAGGTGTATGGCATCACCATTCAGCTGTGCACGGCCAC
CAACAACAACATCCTCATGAAGGAGGTAACCGCTGTACGCCGTGATCATC
TCGGTACAGTATTGGTTTATAGCTCGGCTCGCTTAGCGCCGTGAGACGAT
GCGATTTTTTTTGTTTTTCCGAAGAGAAGAGCAGAGAGGGCGGCGGTGGT
GGTGTGTGTGCCGCGCGTGCGGACAGCGACGCCCCGGTGTTGTGCTAGCA
GCAGCAGCAGCACACGCGGGACGGGGAACGCGCCCGTGCCCATGTCTCCC
TCGTTTGCTGCTGTGCATGCACGTTGGTGCTTCGGGTGTTTTGTTCTTAA
CCTCCCATGTCTTGACCGATATGATGTCGTTGGATCGTGGGGCGTGCGGC
TCCAACGCCTCACCACTTTGATTGACATCCTCGCTTGAAGGGGGTGTCTG
GTTTTTCGTGCTTGCGGTTTTTGCTAACGGCACTTCCAAGGATTCTACCT
CTTGCGTCGTCTGTCCAGCTAACGGCTGTAGGCGTTGGTGCGCCAGGCTA
GAGCCCTACACCATTACAGCTCAACAGTTTATATGCACCAGAGTCTTTCG
TCCATGAACAGTTCCGCGGCGCTCTCACGAAGAACATGCCTACGTTGTGG
TATGTACTCGCGAGCTTGGGCCGGTGTATGGTGATGATCGTGCTCTCTCT
CATGTGTGTTTGCGGTGTGAAATTGTTCTCCTTGGCGTCAACGACCACGG
TGAGTTGCTGACGACCATTGCTGGAGAGAAACGAAAAGTTTTTTTTATAC
TCACCATATTCCTGGCTGTGCTTCGGTCCTTCAACTCTTCTTGATTTTGG
CCAATGCACCAATCTTCGTCTTGCCCTCCCTCCCTCCGTGCCGTTGCTTC
ATTGCCTTGCTATGGTCGTGTATCGCTTGGCTGTCTTGTTCTGTTGCCAC
ACCTCTGTCTTTCGCTCCCACTCTATTGTTCGTCTATGGCTCAGCGCCCC
CCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNACCCCCGGGGGGGTTGTGGAGGCCCTTTGGGGGGAGAA
AAAAAAAATTTTTTTTTTAACCCCCCATTTTCCGGGGGGGGGTTGGGCCC
TTAAATTTTTTTTTTTTTGGGCAAAACCCCCATTTTTTTTTTTCCCCCCC
CCCCCCCGGGGGGGGGGTTTTTTCCCCTTTTAAGGGGGGGTTTTCGTTGG
GGTTTTTTTTTTTTTCCCCCCCCCTTTTTTTTTCCCCCCCCCTTTTTTTT
TTTTTTTGGGTTCGGCCCCCCCCCCCCCCCCCCCCCCCCCTCCCACTCGA
CATCGTCTCCCTCGAAATTGGTAAGGTGTACCCAAAGACGATCGACCTCA
ATGCGTCCGTGGAAGATCCTCGAATCATGGGCGTCATCAGAGAGCAGGGG
GGAAAGGTAAAGGTTTGATTAGATTCCTGAGTGAAGCATTGTGGTGCGAC
GCCGCTGACTTTCACACGGACTTCTATGCTCGTCAGGCTTGGAAGTAGTT
GTTGAAAGAGGCGTTTCTTGTGGACAGGTGAGTCCTTTGTTCACTCCATG
TATGGATTTTTACTATTTACGAAGAAAATGAACGGGCTGTGCAGATGTGA
GCGTGTGGTGTTTTTTGTTGTTTCGCACACGATCATGAGAGCGTTCCGGG
GGAGCAGCCAACTCGGTACTGCTGTAACGTATTTTTTGTTCTCTCCTTTT
TCGTGTATTTTGTTGTCTTACACCTCGGTCCCTCCTCCCGACGATGTTGC
AACATCTTTGTGAAAATGATCGACAATGTGTTCAGACTGCGGCAGTTTTT
CTGCAGGTTTTCTTTTTGTTCACCTCCTAGCTGCTTCCTACTCCGTTCGC
CCCGTGCTTATGAATTATGCTTTGCGACACCCGCTCGTGCGTCAATACTG
CTGTGTGGTATTTGTTGGGTTTTTTGGTAGCGGCTTCCGCGCTGTGTTGT
CCTCTCCAGATACGGTCTTAAAAAAAATTCTTCGTGGTTTGCCGGAGGTT
AATTCCACGACGCGCGTACGCTTGCTTCTATGTGCAGATGTACATGTCGA
TGGGGAACTGGGGCCAGGCGTACAACGAGTTTTACGAGGGGTTCCGGAAC
TATCAGGAGGCGGGGAACCCTAACGCGAAGGTAAGGGGATTGTTACGCAT
GATGCTGCTGGCGTAGCAGTGACGGTATTGCCGTGGAACTTCGTTAATAT
ATGGTGGAGGTATGATAGTCACGGATGGTGCTGGGGGTGTAGCTGTGACA
GTATTGCTGTGGTGAGCGCCGTTGATGTATGCGGGGGAGTTATTGGAGTC
ACACATGATGCGCTGGGGGTGTAGTTGTGACGATGTTGCTGTGATGGGGC
TTCGTTGATGTGTGCATTTGGGTTGTGATAATTATGGTGGTGGTGGTGTA
GCGATAACGATATTGCTGTGGTGGTGATGGTGGTGGTGGCGATATATCAA
AGGCACGCACGTACACCAGATGAGATTCATGTGGCGACTACTGTTGGACC
TACGCAAGTCTTACCCCCTCCGCTCTGCTTGTTGTTCGTGCCCTCTTGGT
TTGGTCATCTACCAAGAACGATCTAGCTCCCTGAATGGGGCTTTCTGAGA
ATGCCATCAAGAGCGTGTGTGTTCCATCACTCAACATCAAGTTGAAGCTA
CGTCCACTATAAGACCCTTTGGTGTTTGCAATGTGATCCTGCACAAGAAA
CAGCAGTGCAGTACATAACCTGACGGCCGTGTTTTCTGTTGTTTATGCAT
CATCCGGATTTTGTTGCTGTAACGCGCGTGCGTGGGTGACAGGTTTGTCT
CAAGTACGTGGTTCTGGCGAACATGCTGGACCTTTCGCGCATCAACCCTT
TCGCGGCAAGAGAGGCAAAAGTGTGAGTCTGGTAGCAAGGGACCATCATC
ATCGAAAAGCTAGAGATGGTATTGGGTGTGAGTGAGTTTTAACGGGATCA
CTTTGCAGCGAACTGGTCGTGCGGGCGCCAGCGAATTAGATAGTCGTGTG
GGAGGTACGGAGTGGTGCGTTGATGCTATGTGCGAAGAAGAACTGACCAA
GGCCGTGCCCCCTTAACACCCCCCGCAGGAAGTATGGTTGGTTGCCCCGT
ACAAGGCCGGCGACATCCCTTGTCACCCTTGGTTCTTCTTCAGGAACCAC
GACTGCCCTTGCATATGCGATTAGTATCGAGTAGCCGTTGGAGGGAGGTG
GGGCGTCAATTTATTCTTGTGGGGTAAGGCAGGGCGTCGACTTCCGTTCA
CACGAAGCTCGAGCAACTGCTGTGAAAAAAGTGCATCACCGCTCTCGCTT
CCTGCTCCAGAGGTCTCGGTCCGCAAAACGACGCCCCCGTCTTTTGTAGG
GATGCATGCAAGGTGAATGGTCCAACGTCTGTAGCACGGGCGTGAATTAC
CACCTCCCTTCCCCCTGTCCCCCAACCTGCTACACGCAGGTTCCAGGAGG
AGAAGGAGATCGTGGCGATGATGGACCTGCGCATGGCGTACGAGGGGAAC
GACCTGGCCAAGTTCGAGCGGACGCTGCACGACAAGCGCAACCGCATCAC
GGAGGACCCCTTCGTTATGACGTACCTGGGACCCCTCAGGCAGCGCATAC
GGGAGTCGGTGCTCATCCACCTCTGCAAGCCGTACAAGAAGATCACCATG
GGGTTCATGGCGGGGGTGAGTGTGGCGAGCCTTTGGCTGACGTTCGTGCG
CCTACAGTATCCGGGTCTAGCCGGATTTCTGGTTCGGCTGGACCCACTCG
CTTCTTTCCTTTTGCGGACGGGGTTGCATGGGCGAGGTATCTGGGAGCGC
TCTTCCTGGGAAAGGGGTCTTGGTTTGTGGCTGTGGTGCATTGCCGGTGT
CTGGGAGCTGTTCACCGATCGGTGGCATCCATTGTCTTCTGGTGCCTTGC
TTTGGGTTTGCTGCGTGGCTGTGGCCACGGACTCGTTGGTTTGGGTGAAG
GGAACCGAAGACTTAAGAGTACGGCAGTAGTGGCTCCGATGCAAGAGTGT
GGTGCGACCATGGCCCTCGACTCTATTCTATCGGAGCCCCCTCGTTTACC
GGAACAAAAGGGTACCCAGCTATACTAAATACGTGGACCGAGTCCGTGTG
ACAACTGATTTCTACTCTCGAATATCGGAGCCCCCTCATATCAGGTACCC
TGTTGTATCGGAGCCACGACTGTAAGTCTGACGTGGGTCAGAGTCGATCA
ATAGTTCTCGTTTGTATTTGTTTTCTGATTGCAGGAGCTGAGCTTAAAGA
CGGCGGAGGTGGAGAAGCTGCTGATCGACCTCATCTTGGACCGCAGGCTC
AACGGCAAGATCGACCAGATCGAGGGCTTCTTGCTGCTGGACGGGCCACT
GGAGACGACCACCTCCCGCAAGCACGACGCCATGGAACGGTGGAGCAACT
CCCTCCGATCCCTCTCGTCCTTCGTGGCGGCGAGGGTCGAGTGCTAGCCG
GTTGTGGTGGTTATGTTTTTTTAGCGCACACACGACGCGGCTTGTGTCTT
GTTGAGAACCTGGTGTGGGGCTAGGGTTCCAATCTCGCAGCATGTCCTTG
TCTCTTCCCCTCTCCTCCTGAACTCGGGCAGGTCTTGCGTGGTGATACTG
TCGGGTTTTTTTTGTTTTTTGGTCTCTCTCTCCACCTCGCCGTCGTCTCT
TTCTTTGTTGGCTCGCTTGCGGTTGGCGCGGGTCTTCTGTTGTTTATGCT
GTTGTCGTCGGTGGTGTTTTTTGGTGTCATCTTTTGTATTGGCTGTTTGG
TTCCGTAGAACGTTCTCCTGCTTCTCTGGAGATGAGACAACGGTACGTGT
TGTTAATCCCCCGCCCCCAGGCGATTGTGTCTCGAAGTCTCCCCCCTCCT
TTTCACGTGGGCTACATGGAAATAGGGGTCACGTTTATCAAATGCGATAG
TATGGCTGTGCATGACCACGGATGGGGGTCCGTTTTCATGCCCACCGTTT
TCGCTCCCGCTTGCTTCTCTGCAGGCATCTGGGCGGGGTAGCACCGGACG
GGACTTTTTTCTTTTTCTTCCCTTGTCTACCCCGTGGCAATATCACATCT
TGTTTACCCTGTGTTCACCTGGAAATTGGCGTGGCCGGCCGGTTGCAGGG
CACACACTTGTTCGTTGGTGGATGATGCAAACATGAAGGAAGGCAGACAG
CAAGTATATAGCAGTGTGGACAACTACCTCTACCTGTATCCATGTAGCAG
TGATCTTGTTCGTCCGCGTACAAAGAGAAAAGGACGGGGGGGCGACCGGT
GCTGTGCCATTGAGCTCGTTCTGGATACGAGCATTTGCTGCGGTCCTTGT
CGACCCTCGTGTGGGTGGTTCCACGGTTTCTGTACCAACAATTTTGCGGG
ATTTTCTGTTTCGCCTCTCAACGGGACGGGTGGGATGATTTCGTGGGCTC
TCTTTTTCCACTCCACGGGACGGGCTGTCATACCATGATTCCGCGGCTCT
CTCACTCTCACGAGGGGGATTCGTTGCATGGCATGGGTGGGGGCTGTCTG
GCAGATCGTATGCAAATAAATCACTCGTTGACGTCGGACCGACGGTGCTG
ACAAGGAGCAGGCTCCCGTCGACACGGCGTGGACGGTCGGTGTGCTCATC
AGGAACGGCTTCTTCGTCGTCGGCGGTGGGCGATGTCAACTGCTAGAGTT
GGTTAGGCTTGACGCGCGTTCATCGTTGAGGTTAGCACCGGGGGGAGGGG
GAGGGGAGGGGGTGAGAACGCCCCGCTCTTGTGTGTCTGTCGTAGAGCTA
GTTCTGTGGTGTTTTCTGGGGGTGAGGTGTGTAGTATGTCGTTTTTTGGT
TTTTTGTATGCACGGGTCCCCACGAATTTGAACTTCTTGAGGGGATGTGG
GGTCTGGAGCTAGCTGCCTCGCGAGTTGGACGTTGTGGTTCCATCGTGTG
GATCTATTCTTGTTTGTGGCGAGTTTTGTACTCTCGTTTCTGTCGTCCTC
TTGTCGGGATGGGCTTTCCTTGGTTTGGTAGAGGAAGGGAGGGAGAAGAG
ACTGCCAGCAGTTCTCGTTCGATGTTCAAAGTTGGATTGCTTGACTTGAG
TGCAGTCGAGGGGGGGGG
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Coding sequence (CDS) from alignment at chr_00:3531472..3541939-

>Ec-00_003560.1 ID=Ec-00_003560.1|Name=Ec-00_003560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1077bp|location=Sequence derived from alignment at chr_00:3531472..3541939- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAACAGAGGTACAAGGAGCTGCTGACGCACGTGAGCTCTGTGACAAG
AAATGAGAGCTCGGACAGCGTGAACGGCATCTTGGATACAGTGTCGGTTT
CGGAAGACTTGAGAATGGTGTCCCAGATGTATGAGACGACCCTTTCGGCC
TTGAAGGAGGAGGGGAACGAGCGAATGTGGTTCAACACCTACGTCAAGCT
TGCCAAGGTGTACCTGCAAATCCCCGATTACGTCAAGGTCCAGACGACCA
TCGACACCCTCCACGACTCGTGCCGATTGGCCAACGGTCAGGACGACCCC
TCCAAGGGGAACCAGCTGCTGGAGGTGTATGGCATCACCATTCAGCTGTG
CACGGCCACCAACAACAACATCCTCATGAAGGAGGTGTACCCAAAGACGA
TCGACCTCAATGCGTCCGTGGAAGATCCTCGAATCATGGGCGTCATCAGA
GAGCAGGGGGGAAAGATGTACATGTCGATGGGGAACTGGGGCCAGGCGTA
CAACGAGTTTTACGAGGGGTTCCGGAACTATCAGGAGGCGGGGAACCCTA
ACGCGAAGGTTTGTCTCAAGTACGTGGTTCTGGCGAACATGCTGGACCTT
TCGCGCATCAACCCTTTCGCGGCAAGAGAGGCAAAAGTGTTCCAGGAGGA
GAAGGAGATCGTGGCGATGATGGACCTGCGCATGGCGTACGAGGGGAACG
ACCTGGCCAAGTTCGAGCGGACGCTGCACGACAAGCGCAACCGCATCACG
GAGGACCCCTTCGTTATGACGTACCTGGGACCCCTCAGGCAGCGCATACG
GGAGTCGGTGCTCATCCACCTCTGCAAGCCGTACAAGAAGATCACCATGG
GGTTCATGGCGGGGGAGCTGAGCTTAAAGACGGCGGAGGTGGAGAAGCTG
CTGATCGACCTCATCTTGGACCGCAGGCTCAACGGCAAGATCGACCAGAT
CGAGGGCTTCTTGCTGCTGGACGGGCCACTGGAGACGACCACCTCCCGCA
AGCACGACGCCATGGAACGGTGGAGCAACTCCCTCCGATCCCTCTCGTCC
TTCGTGGCGGCGAGGGTCGAGTGCTAG
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Synonyms
The feature 'Ec-00_003560.1' has the following synonyms
Synonym
Esi0217_0043
Esi_0217_0043