Ec-00_003550.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003550.2
Unique NameEc-00_003550.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length197
Homology
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BLAST of Ec-00_003550.2 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.910e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = -1 
Query: 2952 ELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 3161
            ELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC
Sbjct:  289 ELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 358
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BLAST of Ec-00_003550.2 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.770e-27
Identity = 65/70 (92.86%), Postives = 67/70 (95.71%), Query Frame = -1 
Query: 2952 ELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVEC 3161
            ELSLKT EVEKLLI+LILDRRLNGKI+QIEGFLLLDGP ET TSRKHDAMERWSNSLRSLSSFVAARVEC
Sbjct:  381 ELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARVEC 450
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BLAST of Ec-00_003550.2 vs. uniprot
Match: D7FRR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR4_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 6.640e-20
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2 
Query:   26 GLKNVQEFDSLAAGGSGGPTPEATLAKRKKDIKSKKSKEEKQRARDSERXAXAAKKAEAK 205
            GLKNVQEFDSLAAGGSGGPTPEATLAKRKKDIKSKKSKEEKQRARDSERX X AKKAEAK
Sbjct:   10 GLKNVQEFDSLAAGGSGGPTPEATLAKRKKDIKSKKSKEEKQRARDSERXXXXAKKAEAK 69
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BLAST of Ec-00_003550.2 vs. uniprot
Match: A0A6H5JP83_9PHAE (EAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP83_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.840e-16
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 2 
Query:   26 GLKNVQEFDSLAAGGSGGPTPEATLAKRKKDIKSKKSKEEKQRARDSERXAXAAKKAEA 202
            GLKNVQEFD LAAGGSGGPTPEATLAKRKKDIKSKK KEEKQRARDSER A AAKKAEA
Sbjct: 1024 GLKNVQEFDGLAAGGSGGPTPEATLAKRKKDIKSKKIKEEKQRARDSEREAKAAKKAEA 1082
[Close]
BLAST of Ec-00_003550.2 vs. uniprot
Match: A0A7S2B813_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B813_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.330e-12
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = -1 
Query: 2958 ELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 3161
            EL L+ +EVE LL+D+ILD+R+ GKIDQI GFLLL G  +    +K+DA+E+W+N+L SL+  + ARV
Sbjct:  130 ELKLEVSEVELLLVDMILDKRVFGKIDQINGFLLLGGESDNVVEKKYDALEKWTNTLSSLNKNLGARV 197
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BLAST of Ec-00_003550.2 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.550e-11
Identity = 36/69 (52.17%), Postives = 55/69 (79.71%), Query Frame = -1 
Query: 2958 QELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 3164
            QEL L+   VE LL+D+I+D+R++GKIDQI+GFLLL G   + +S+K+DA+E+W  +L SL++ ++ARV
Sbjct:  404 QELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARV 472
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BLAST of Ec-00_003550.2 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 2.430e-7
Identity = 28/70 (40.00%), Postives = 51/70 (72.86%), Query Frame = -1 
Query: 2955 QELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARVE 3164
            QEL ++  EVE+L++++ILD R  GKIDQI G L+L G  ++  ++K++A++RWS++L  L + +  +++
Sbjct:  379 QELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKIQ 448
[Close]
BLAST of Ec-00_003550.2 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.010e-5
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = -1 
Query: 2982 QELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSL 3164
            +EL L   EVE+L++D+IL+ R+ GKIDQI+GFLLL         +K DAM  W+ SL +L
Sbjct:  426 RELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEAL 486
[Close]
BLAST of Ec-00_003550.2 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.130e-5
Identity = 30/60 (50.00%), Postives = 45/60 (75.00%), Query Frame = -1 
Query: 2985 QELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRS 3164
            +EL L   E+E LL+DLILD+R+ G+IDQI GF+LL  P   ++S KH A+ RW+++L++
Sbjct:  381 KELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLR-PEGRSSSGKHAALARWADALQA 439
The following BLAST results are available for this feature:
BLAST of Ec-00_003550.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FRR5_ECTSI1.910e-31100.00COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE1.770e-2792.86COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
D7FRR4_ECTSI6.640e-2096.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP83_9PHAE2.840e-1693.22EAF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2B813_9STRA1.330e-1254.41COP9 signalosome complex subunit 2 n=1 Tax=Florenc... [more]
A0A7S2BKS2_9STRA2.550e-1152.17COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A6V1ITC2_HETAK2.430e-740.00COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2W4K8_9STRA1.010e-549.18COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
W7U093_9STRA2.130e-550.00COP9 signalosome complex subunit 2 n=2 Tax=Monodop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3528571..3533314 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length3174
Hectar predicted targeting categoryother localisation
Gene idEc-00_003550.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003550Ec-00_003550Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 3528571..3533314 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003550.2Ec-00_003550.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 3531046..3531636 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003550.2.1Ec-00_003550.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3528571..3528597 +
Ec-00_003550.2.2Ec-00_003550.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3529402..3529581 +
Ec-00_003550.2.3Ec-00_003550.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3530348..3533314 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0035505UTR:Ec-00_003550.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 3528571..3528597 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003550.2CDS:Ec-00_003550.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 3531046..3531636 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0035503UTR:Ec-00_003550.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 3531637..3533314 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003550.2 ID=Ec-00_003550.2|Name=Ec-00_003550.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=197bp
MRENTILKQHGGGAQRNTHVVKYASFFGSNAYSRILHEVSNIARAVPLTC
YILLNEPPGIGRVHIWFLCTPACMAGIEASRHGALALGAPALLSAQVSPK
QRYPSTLFSRHPCTCVVRTSHRSQASSVFTVSRQLLAVFLPPPPPSTALK
SSNPTLNIERELLAVSSPSLPLPNQGKPIPTRGRQKREYKTRHKQE*
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spliced messenger RNA

>Ec-00_003550.2 ID=Ec-00_003550.2|Name=Ec-00_003550.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3174bp|location=Sequence derived from alignment at chr_00:3528571..3533314+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGATTGGTTTTGCCAACCAGCTCGGGGCTTAAGAACGTCCAGGAATT
CGACAGCCTGGCGGCGGGAGGGTCGGGAGGGCCTACGCCGGAGGCCACCT
TGGCGAAGAGGAAGAAGGACATCAAGTCCAAGAAGAGCAAGGAGGAGAAG
CAGAGGGCGAGGGATAGCGAGCGAGAAGCCAAGGCCGCGAAGAAGGCGGA
AGCAAAGGCGGCAGAAATGGCGGCGAAAGCGGCAGAAAAAGCGACAGCGA
AAGCCGCGAAGGCGGAAGAAAAGGCCGCGGCAAAAGCCGCAAAGGCGGCA
GAAAAAGCGGCGGCAAGAGCCGCCAGGGCTGCGGAAAAGGCCGCAGCGAG
AGCGTCAGCCAAGGAGTCGAAGGGCACAGCCAGAGGAAGAGAGGCAAGGC
CAGCGGGGGGAGGTGATGGGAACATCTTGGGGTAGCCGCTGCTGCTGCTG
CTGCTGCTGCTGCTGTCAGAAAGAGGCGGCGGTGGGCAGGGATAGGAAGG
CGATCGGAGACGCATACCGAAATCGCGTCGGTTATCCCGCAAGAGGACGG
GGTGCCTCGGTTCCTGAGGCGTTCTTGTACTGCGTTTGTCGAGGAAAGTC
GCAGCTGTTGCTATTTAGGACTTGCTTCCTGCAAGTGATGCCTCGGCGTA
TGCTGTACCACAACGTTGAGACTGCGTGTGCGATTTAACGGATGAAACAC
GACGAGGGGGGGGGTGGCTTCCACAACGGCGAGGCCTCCGCGGGACCGTC
GTGGCTGTGGTTGAGGTGTCTGCATGTGACGGTGGTTGTGCTAGCGCTTA
CATAGCGAGACAAGTTCGTTGGCTCGCTTCCCCGTTCGTCCCACTTACAT
GTTGATGGTGTTTTCGGTGTTCTCTACAATTGTTGCTTAGCTTTTCAACG
CGTTCATGCGGGAAAACACGATCTTGAAGCAACATGGAGGGGGGGCGCAG
AGAAACACGCACGTCGTGAAGTACGCCTCGTTTTTTGGCAGCAACGCCTA
TTCGCGCATACTCCATGAGGTAAGCAACATCGCCAGGGCGGTGCCTCTGA
CGTGCTACATACTACTGAACGAACCGCCGGGCATTGGTCGTGTTCACATA
TGGTTTCTCTGCACCCCGGCGTGCATGGCTGGAATCGAGGCGTCGCGACA
CGGGGCACTAGCGCTTGGTGCACCCGCGTTGTTATCGGCACAAGTCTCTC
CGAAGCAAAGGTACCCGTCCACTCTCTTCTCGAGACATCCTTGCACGTGC
GTCGTTCGCACCTCGCATAGGTCACAGGCGTCAAGTGTGTTCACCGTCTC
ACGACAACTATTGGCAGTCTTCTTGCCCCCCCCCCCCCCCTCGACTGCAC
TCAAGTCAAGCAATCCAACTTTGAACATCGAACGAGAACTGCTGGCAGTC
TCTTCTCCCTCCCTTCCTCTACCAAACCAAGGAAAGCCCATCCCGACAAG
AGGACGACAGAAACGAGAGTACAAAACTCGCCACAAACAAGAATAGATCC
ACACGATGGAACCACAACGTCCAACTCGCGAGGCAGCTAGCTCCAGACCC
CACATCCCCTCAAGAAGTTCAAATTCGTGGGGACCCGTGCATACAAAAAA
CCAAAAAACGACATACTACACACCTCACCCCCAGAAAACACCACAGAACT
AGCTCTACGACAGACACACAAGAGCGGGGCGTTCTCACCCCCTCCCCTCC
CCCTCCCCCCGGTGCTAACCTCAACGATGAACGCGCGTCAAGCCTAACCA
ACTCTAGCAGTTGACATCGCCCACCGCCGACGACGAAGAAGCCGTTCCTG
ATGAGCACACCGACCGTCCACGCCGTGTCGACGGGAGCCTGCTCCTTGTC
AGCACCGTCGGTCCGACGTCAACGAGTGATTTATTTGCATACGATCTGCC
AGACAGCCCCCACCCATGCCATGCAACGAATCCCCCTCGTGAGAGTGAGA
GAGCCGCGGAATCATGGTATGACAGCCCGTCCCGTGGAGTGGAAAAAGAG
AGCCCACGAAATCATCCCACCCGTCCCGTTGAGAGGCGAAACAGAAAATC
CCGCAAAATTGTTGGTACAGAAACCGTGGAACCACCCACACGAGGGTCGA
CAAGGACCGCAGCAAATGCTCGTATCCAGAACGAGCTCAATGGCACAGCA
CCGGTCGCCCCCCCGTCCTTTTCTCTTTGTACGCGGACGAACAAGATCAC
TGCTACATGGATACAGGTAGAGGTAGTTGTCCACACTGCTATATACTTGC
TGTCTGCCTTCCTTCATGTTTGCATCATCCACCAACGAACAAGTGTGTGC
CCTGCAACCGGCCGGCCACGCCAATTTCCAGGTGAACACAGGGTAAACAA
GATGTGATATTGCCACGGGGTAGACAAGGGAAGAAAAAGAAAAAAGTCCC
GTCCGGTGCTACCCCGCCCAGATGCCTGCAGAGAAGCAAGCGGGAGCGAA
AACGGTGGGCATGAAAACGGACCCCCATCCGTGGTCATGCACAGCCATAC
TATCGCATTTGATAAACGTGACCCCTATTTCCATGTAGCCCACGTGAAAA
GGAGGGGGGAGACTTCGAGACACAATCGCCTGGGGGCGGGGGATTAACAA
CACGTACCGTTGTCTCATCTCCAGAGAAGCAGGAGAACGTTCTACGGAAC
CAAACAGCCAATACAAAAGATGACACCAAAAAACACCACCGACGACAACA
GCATAAACAACAGAAGACCCGCGCCAACCGCAAGCGAGCCAACAAAGAAA
GAGACGACGGCGAGGTGGAGAGAGAGACCAAAAAACAAAAAAAACCCGAC
AGTATCACCACGCAAGACCTGCCCGAGTTCAGGAGGAGAGGGGAAGAGAC
AAGGACATGCTGCGAGATTGGAACCCTAGCCCCACACCAGGTTCTCAACA
AGACACAAGCCGCGTCGTGTGTGCGCTAAAAAAACATAACCACCACAACC
GGCTAGCACTCGACCCTCGCCGCCACGAAGGACGAGAGGGATCGGAGGGA
GTTGCTCCACCGTTCCATGGCGTCGTGCTTGCGGGAGGTGGTCGTCTCCA
GTGGCCCGTCCAGCAGCAAGAAGCCCTCGATCTGGTCGATCTTGCCGTTG
AGCCTGCGGTCCAAGATGAGGTCGATCAGCAGCTTCTCCACCTCCGCCGT
CTTTAAGCTCAGCTCCTGCAATCA
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protein sequence of Ec-00_003550.2

>Ec-00_003550.2 ID=Ec-00_003550.2|Name=Ec-00_003550.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=197bp
MRENTILKQHGGGAQRNTHVVKYASFFGSNAYSRILHEVSNIARAVPLTC
YILLNEPPGIGRVHIWFLCTPACMAGIEASRHGALALGAPALLSAQVSPK
QRYPSTLFSRHPCTCVVRTSHRSQASSVFTVSRQLLAVFLPPPPPSTALK
SSNPTLNIERELLAVSSPSLPLPNQGKPIPTRGRQKREYKTRHKQE*
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mRNA from alignment at chr_00:3528571..3533314+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003550.2 ID=Ec-00_003550.2|Name=Ec-00_003550.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4744bp|location=Sequence derived from alignment at chr_00:3528571..3533314+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGATTGGTTTTGCCAACCAGCTCGGTAAGTCCTACTGGGACGACACG
GTTAGCGCTCAACAAGTCGCAGTTTTTTTTCCCTTCGGAATGAAAGTACT
GGTGCTAGATACGGTTGTGGCACCACCGCTGGGGCGGGACTGCTGCACCC
GGTTAGCGGGGGCGAGGAGAGGGGGGCGAAATCATGGTTTCTGGGTGGTA
CGGGGCACGGCCTACAAGTGCTCATCCTCGCAGACGTTTCGTTTTGTGGG
AAAAGGTTTCTCACATGCATACAGGCGTTTTTTTGTCGTCTCGGTGAGCG
CCCGATGAACTCAAGCGCGCGGACCCTCGTTGCACGCGCGATACATGCGT
GTTTTGAGACGCAGCAGTCCAAGCGTGCCCGATTGTATTGTTTGCCGTTT
TTCTGCTGGGATTTTCGGGTGCTCTCTCGAGAGACACACGTGTGCTCACA
CGTTGGGGCGACATGTTCTTCATTCCCCCGTGCTTGTAATTTCGTTTCCC
CATTCGTTGAGTGTGTCCTTTCTTTTTTTTTTGCTTAGCTGTCCTTCCAC
GTACAAGCAGAGGGGATCAAACACCGCCACAGGTAGTCGTTCGTTTGGAT
TTCTGCCTTCGTTTTTCACGTCTTGAGCTTTCCCTCGAGAACAAAGGCGT
TTCTGGCATCGCAATGTGTCGTATCGCAACGTAACCGCTTAGCTCTTACA
TGGTCTTTTTTTTTTCCTTCTTTTCGTTCTGCATGTCTTTTGTCGTCCTG
CATTCGTTTTTTTTTAGTGTGGGTGTTTTTTTTTCGTTCAATATTCAATG
CCGCGTTTGTTTGATCGCCTTCGAAACACAGGGGCTTAAGAACGTCCAGG
AATTCGACAGCCTGGCGGCGGGAGGGTCGGGAGGGCCTACGCCGGAGGCC
ACCTTGGCGAAGAGGAAGAAGGACATCAAGTCCAAGAAGAGCAAGGAGGA
GAAGCAGAGGGCGAGGGATAGCGAGCGAGAAGCCAAGGCCGCGAAGAAGG
CGGAAGCAAAGGTGTGCGTGCGATTGCAGGGGAACCACGGAGAGAGACAG
AGAGGGGGGGAGGGGGGGAGGGAGAGACAGACAGACAGACAGAGAGAGAG
AGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGGGAGGGAGACGGGGCGTTGAAGAGATGGATGGAGAGATAGATAGGCAG
ACAAAGCGATGGGGAGATCAAATAATTGACAGACACGCTTGTAGATACAG
AATTGGACGTGGGCAGATAGCATGGATGAAAATTACAGCGGCAGGTGGTG
CGTGTGTAGCGATACGGTGTATTACTCTTATGCTGGAAACACACACACTC
TCGCGCGTATGTATGCAGTGCTGTCGTTTTGGAAACCGCTGGCGAACGTC
TTGAGAGTAGTAGGGGGGGGAAATCATTCTGGGTCATTGTCCTTCACGCC
ACCGGAACCAGCGCCTCCCCCCCCCCGGAAGTGCTGCTCCCCCGTCCCCT
TCCGAAGCCCCTTTCAGTAGTCGTGTCTGCCGAACGTGAGATGTTTGGTT
AGCCGGGATGCCGTAGCATATCTGGTTGGCACGGTAACCGCTAGGATCAT
AGCCAGGTCATCCTTGTGAAACTCAGCCCGGGCCGGCGAAAACCCGGCAT
TATCGCTCCATCCCGTTATTTTTTTGACATGCGAGGCCAATGACCTAAGG
ACTTGAGCATATGTTTTCATTAGTGCACCCTACTGCCGCATCCTGCGTGC
CTGTTCCCTCGTGTACTGCTTACGCAGGCGGCAGAAATGGCGGCGAAAGC
GGCAGAAAAAGCGACAGCGAAAGCCGCGAAGGCGGAAGAAAAGGCCGCGG
CAAAAGCCGCAAAGGCGGCAGAAAAAGCGGCGGCAAGAGCCGCCAGGGCT
GCGGAAAAGGCCGCAGCGAGAGCGTCAGCCAAGGAGTCGAAGGGCACAGC
CAGAGGAAGAGAGGCAAGGCCAGCGGGGGGAGGTGATGGGAACATCTTGG
GGTAGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCAGAAAGAGGCGGC
GGTGGGCAGGGATAGGAAGGCGATCGGAGACGCATACCGAAATCGCGTCG
GTTATCCCGCAAGAGGACGGGGTGCCTCGGTTCCTGAGGCGTTCTTGTAC
TGCGTTTGTCGAGGAAAGTCGCAGCTGTTGCTATTTAGGACTTGCTTCCT
GCAAGTGATGCCTCGGCGTATGCTGTACCACAACGTTGAGACTGCGTGTG
CGATTTAACGGATGAAACACGACGAGGGGGGGGGTGGCTTCCACAACGGC
GAGGCCTCCGCGGGACCGTCGTGGCTGTGGTTGAGGTGTCTGCATGTGAC
GGTGGTTGTGCTAGCGCTTACATAGCGAGACAAGTTCGTTGGCTCGCTTC
CCCGTTCGTCCCACTTACATGTTGATGGTGTTTTCGGTGTTCTCTACAAT
TGTTGCTTAGCTTTTCAACGCGTTCATGCGGGAAAACACGATCTTGAAGC
AACATGGAGGGGGGGCGCAGAGAAACACGCACGTCGTGAAGTACGCCTCG
TTTTTTGGCAGCAACGCCTATTCGCGCATACTCCATGAGGTAAGCAACAT
CGCCAGGGCGGTGCCTCTGACGTGCTACATACTACTGAACGAACCGCCGG
GCATTGGTCGTGTTCACATATGGTTTCTCTGCACCCCGGCGTGCATGGCT
GGAATCGAGGCGTCGCGACACGGGGCACTAGCGCTTGGTGCACCCGCGTT
GTTATCGGCACAAGTCTCTCCGAAGCAAAGGTACCCGTCCACTCTCTTCT
CGAGACATCCTTGCACGTGCGTCGTTCGCACCTCGCATAGGTCACAGGCG
TCAAGTGTGTTCACCGTCTCACGACAACTATTGGCAGTCTTCTTGCCCCC
CCCCCCCCCCTCGACTGCACTCAAGTCAAGCAATCCAACTTTGAACATCG
AACGAGAACTGCTGGCAGTCTCTTCTCCCTCCCTTCCTCTACCAAACCAA
GGAAAGCCCATCCCGACAAGAGGACGACAGAAACGAGAGTACAAAACTCG
CCACAAACAAGAATAGATCCACACGATGGAACCACAACGTCCAACTCGCG
AGGCAGCTAGCTCCAGACCCCACATCCCCTCAAGAAGTTCAAATTCGTGG
GGACCCGTGCATACAAAAAACCAAAAAACGACATACTACACACCTCACCC
CCAGAAAACACCACAGAACTAGCTCTACGACAGACACACAAGAGCGGGGC
GTTCTCACCCCCTCCCCTCCCCCTCCCCCCGGTGCTAACCTCAACGATGA
ACGCGCGTCAAGCCTAACCAACTCTAGCAGTTGACATCGCCCACCGCCGA
CGACGAAGAAGCCGTTCCTGATGAGCACACCGACCGTCCACGCCGTGTCG
ACGGGAGCCTGCTCCTTGTCAGCACCGTCGGTCCGACGTCAACGAGTGAT
TTATTTGCATACGATCTGCCAGACAGCCCCCACCCATGCCATGCAACGAA
TCCCCCTCGTGAGAGTGAGAGAGCCGCGGAATCATGGTATGACAGCCCGT
CCCGTGGAGTGGAAAAAGAGAGCCCACGAAATCATCCCACCCGTCCCGTT
GAGAGGCGAAACAGAAAATCCCGCAAAATTGTTGGTACAGAAACCGTGGA
ACCACCCACACGAGGGTCGACAAGGACCGCAGCAAATGCTCGTATCCAGA
ACGAGCTCAATGGCACAGCACCGGTCGCCCCCCCGTCCTTTTCTCTTTGT
ACGCGGACGAACAAGATCACTGCTACATGGATACAGGTAGAGGTAGTTGT
CCACACTGCTATATACTTGCTGTCTGCCTTCCTTCATGTTTGCATCATCC
ACCAACGAACAAGTGTGTGCCCTGCAACCGGCCGGCCACGCCAATTTCCA
GGTGAACACAGGGTAAACAAGATGTGATATTGCCACGGGGTAGACAAGGG
AAGAAAAAGAAAAAAGTCCCGTCCGGTGCTACCCCGCCCAGATGCCTGCA
GAGAAGCAAGCGGGAGCGAAAACGGTGGGCATGAAAACGGACCCCCATCC
GTGGTCATGCACAGCCATACTATCGCATTTGATAAACGTGACCCCTATTT
CCATGTAGCCCACGTGAAAAGGAGGGGGGAGACTTCGAGACACAATCGCC
TGGGGGCGGGGGATTAACAACACGTACCGTTGTCTCATCTCCAGAGAAGC
AGGAGAACGTTCTACGGAACCAAACAGCCAATACAAAAGATGACACCAAA
AAACACCACCGACGACAACAGCATAAACAACAGAAGACCCGCGCCAACCG
CAAGCGAGCCAACAAAGAAAGAGACGACGGCGAGGTGGAGAGAGAGACCA
AAAAACAAAAAAAACCCGACAGTATCACCACGCAAGACCTGCCCGAGTTC
AGGAGGAGAGGGGAAGAGACAAGGACATGCTGCGAGATTGGAACCCTAGC
CCCACACCAGGTTCTCAACAAGACACAAGCCGCGTCGTGTGTGCGCTAAA
AAAACATAACCACCACAACCGGCTAGCACTCGACCCTCGCCGCCACGAAG
GACGAGAGGGATCGGAGGGAGTTGCTCCACCGTTCCATGGCGTCGTGCTT
GCGGGAGGTGGTCGTCTCCAGTGGCCCGTCCAGCAGCAAGAAGCCCTCGA
TCTGGTCGATCTTGCCGTTGAGCCTGCGGTCCAAGATGAGGTCGATCAGC
AGCTTCTCCACCTCCGCCGTCTTTAAGCTCAGCTCCTGCAATCA
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Coding sequence (CDS) from alignment at chr_00:3528571..3533314+

>Ec-00_003550.2 ID=Ec-00_003550.2|Name=Ec-00_003550.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=591bp|location=Sequence derived from alignment at chr_00:3528571..3533314+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGGGAAAACACGATCTTGAAGCAACATGGAGGGGGGGCGCAGAGAAA
CACGCACGTCGTGAAGTACGCCTCGTTTTTTGGCAGCAACGCCTATTCGC
GCATACTCCATGAGGTAAGCAACATCGCCAGGGCGGTGCCTCTGACGTGC
TACATACTACTGAACGAACCGCCGGGCATTGGTCGTGTTCACATATGGTT
TCTCTGCACCCCGGCGTGCATGGCTGGAATCGAGGCGTCGCGACACGGGG
CACTAGCGCTTGGTGCACCCGCGTTGTTATCGGCACAAGTCTCTCCGAAG
CAAAGGTACCCGTCCACTCTCTTCTCGAGACATCCTTGCACGTGCGTCGT
TCGCACCTCGCATAGGTCACAGGCGTCAAGTGTGTTCACCGTCTCACGAC
AACTATTGGCAGTCTTCTTGCCCCCCCCCCCCCCCTCGACTGCACTCAAG
TCAAGCAATCCAACTTTGAACATCGAACGAGAACTGCTGGCAGTCTCTTC
TCCCTCCCTTCCTCTACCAAACCAAGGAAAGCCCATCCCGACAAGAGGAC
GACAGAAACGAGAGTACAAAACTCGCCACAAACAAGAATAG
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Synonyms
The feature 'Ec-00_003550.2' has the following synonyms
Synonym
Esi0217_0042
Esi_0217_0042