Ec-00_003540.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_003540.1
Unique Name	Ec-00_003540.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	1150

Homology

[Close]

BLAST of Ec-00_003540.1 vs. uniprot
Match: D7FRR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR3_ECTSI)

HSP 1 Score: 1070 bits (2768), Expect = 0.000e+0
Identity = 734/1050 (69.90%), Postives = 736/1050 (70.10%), Query Frame = 3

Query:  945 MKPVGNGEGEEEEEDGEIQEGEIPTNSKGQAATPGSTAGEALPHQGLQQIEQARSLLEAAPGDGGGVDRVKKLLVQSKAAYLQAASALAAAGGENTDVAAISQGAPQAALICVASEAVFPEAIALVRWFCSKHVASLCEVAQAMEIEAKRLEKQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFAPVSPALDGGGEADENSQTTEQAAA-------------APNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIGALRRVATLAPRTYATIAEAFAAALRCMTRGAVGGPEGEWTRRPALNDANVRHTLFACCCNLAEGLPAAACPPPDDSRLRGRGKLVSALKACHVMRGFVADGHPLPLATAQPGGGSGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEADCAEAAVAAESXXXXXXXXXXXXXXXXXXXXXXXHAAVEGDLEPGHERGAGVVDGRSSDGSFSKSAAASDAAVASLIPATGERTKAPAVQSPAKQSVAGKRRTGKKPRPAEKKSKGAATAVPATSRSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDANAAAAARMSHAGKPTPSAGSKSGGPATPAGEEEGPTMAALFGEEEDNEPESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAGIDVADGAMPSAAAAPATKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGXXXXXXXXXXXXXXXXXXXXXRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSNPEPVRFTGDAVRILCARGRWGTFWGAHPLGRLNEMPAAGGYCRIRKAVS 4055
            MKPVGNGEGEEEEEDGEIQEGEIPTNSKGQAATPGSTAGEALPHQGLQQIEQARSLLEAAPGDGGGVDRVKKLLVQSKAAYLQAASALAAAGGENTDVAAISQGAPQAALICVASEAVFPEAIALVRWFCSKHVASLCEVAQAMEIEAKRLEKQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFAPVSPALDGGGEAD                        APNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIGALRRVATLAPRTYATIAEAFAAALRCMTRGAVGGPEGEWTRRPALNDANVRHTLFACCCNLAEGLPAAACPPPDDSRLRGRGKLVSALKACHVMRGFVADGHPLPLATAQPGGGSGEA                                                           AE A                                           AGVV G S       + A            TG  +K                                                                                                                                                       AGKPTPSA           GEEEGPTMAALFGEEEDNEPESA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAGIDVADGAMPSAAAAPATKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGXXXXXXXXXXXXXXXXXXXXXRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSNPEPVRFTGDAVRILCARGRWGTFWGAHPLGRLNEMPAAGGYCRIRKAVS
Sbjct:    1 MKPVGNGEGEEEEEDGEIQEGEIPTNSKGQAATPGSTAGEALPHQGLQQIEQARSLLEAAPGDGGGVDRVKKLLVQSKAAYLQAASALAAAGGENTDVAAISQGAPQAALICVASEAVFPEAIALVRWFCSKHVASLCEVAQAMEIEAKRLEKQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFAPVSPALDGGGEADXXXXXXXXXXXXXXXXXXXXXXXXAPNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIGALRRVATLAPRTYATIAEAFAAALRCMTRGAVGGPEGEWTRRPALNDANVRHTLFACCCNLAEGLPAAACPPPDDSRLRGRGKLVSALKACHVMRGFVADGHPLPLATAQPGGGSGEA-----------------------------------------------------------AETA-------------------------------------------AGVVVGGSGAAGIGSACAXXXXXXXXXXXTTGSASKT------------------------------------------------------------------------------------------------------------------------------------------------------AGKPTPSAXXXXXXXXXXXGEEEGPTMAALFGEEEDNEPESATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAGIDVADGAMPSAAAAPATKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGXXXXXXXXXXXXXXXXXXXXXRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSNPEPVRFTGDAVRILCARGRWGTFWGAHPLGRLNEMPAAGGYCRIRKAVS 798

[Close]

BLAST of Ec-00_003540.1 vs. uniprot
Match: A0A6H5JP83_9PHAE (EAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP83_9PHAE)

HSP 1 Score: 1033 bits (2671), Expect = 0.000e+0
Identity = 752/1009 (74.53%), Postives = 776/1009 (76.91%), Query Frame = 3

Query:  945 MKPVGNGEGEEEEED--GEIQEGEIPTNSKGQAATPGSTAGEALPHQGLQQIEQARSLLEAAPGDGGGVDRVKKLLVQSKAAYLQAASALAAAGGENTDVAAISQGAPQAALICVASEAVFPEAIALVRWFCSKHVASLCEVAQAMEIEAKRLEKQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFAPVSPALDGGGEADENSQTTEQAAAAPNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIGALRR-----VATLAPRTYATIAEAFAAALRCMTRGAVGGPEGEWTRRPALNDANVRHTLFACCCNLAEGLPAAACPPPDDSRLRGRGKLVSALKACHVMRGFVADGHPLPLATAQPGGGSGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEADCAEAAVAAESXXXXXXXXXXXXXXXXXXXXXXXHAAVEGDLEPGHERGAGVVDGRSSDGSFSKSAAASDAAVASLIPATGERTKAPAVQSPAKQSVAGKRRTGKKPRPAEKKSKGAATAVPATSRSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDANAAAAARMSHAGKPTPSAGSKSGGPATPAGEEEGPTMAALFGEEEDNEPESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAGIDVADGAMPSAAAA--PATKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGXXXXXXXXXXXXXXXXXXXXXRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSNPEPVRFTGDAVR 3944
            MKPVGNGE         GEIQE EIPTNS GQAATPGSTAGEALPHQGLQQIEQARSL+EAAPGDGGGVDRVKKLLVQSKAAYLQAASALAAAG ENTDV+AISQGAPQAALICVASEAVFP+AIALVRWFCSKHVASLCEV+QAMEIEAKRLEKQ  XXXXXXXXXXXXXXXXXXXXXXXXXXX       AERA RLLRVL+ SFNAFL+QSS GSGMFST+AHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFA VSPALDGGGEADE SQT EQ  AAPNSDNLDRMGKKDVDKLL+C+SGGE KKDE YLS PCIC+EAIGALRR     VATLAP TYATIAEAFAAALRCMTRGAVGGPEGEW+RRPALNDANVRHTLFACCC+LAEGLPAA  PPPDDSRLRG GKLVSALKACHVMRGFV DGHPLPLATA+PGGGSGEA                            XXXXXXXXX                TVEADCAE       XXXXXXX   XXXXXXXXXX      VE D+E GHE+ AGVVD RSS+G  SKSAAAS+AAVASL PATGERTKAP V+SPAKQ VAGKRRTGKKP  AE+K KGAATAVPA SRS  XXXXXXXXXXX                                                                                    DANA AAAR SHAGKPTPSA SKSGG ATPA EEEGP+MAALFGEEEDNEP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G  VADGAMPSAAAA  PATKSYPPLQTAPEK PAWREGERYGVVLG+SFYGSGXXXXXXXXXXXXXXXXXXXXX         TGE+NPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRW+G      GDV GGGQQQRWAAE+EYESRDPSNPEPVRFTGDAVR
Sbjct:    1 MKPVGNGEXXXXXXXXXGEIQESEIPTNSNGQAATPGSTAGEALPHQGLQQIEQARSLVEAAPGDGGGVDRVKKLLVQSKAAYLQAASALAAAGEENTDVSAISQGAPQAALICVASEAVFPKAIALVRWFCSKHVASLCEVSQAMEIEAKRLEKQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGSGTRAERATRLLRVLISSFNAFLEQSSPGSGMFSTAAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFASVSPALDGGGEADEKSQTKEQVPAAPNSDNLDRMGKKDVDKLLVCISGGEGKKDEAYLSPPCICVEAIGALRRQEKSVVATLAPPTYATIAEAFAAALRCMTRGAVGGPEGEWSRRPALNDANVRHTLFACCCHLAEGLPAATSPPPDDSRLRGHGKLVSALKACHVMRGFVTDGHPLPLATARPGGGSGEAPAVAAGVVIRGSGAAGIGSACASSSVVTXXXXXXXXXASKTAGDHCAGAEAAATVEADCAEXXXXXXXXXXXXXXVPLXXXXXXXXXX------VESDVELGHEKDAGVVDARSSEGPLSKSAAASNAAVASLCPATGERTKAPPVRSPAKQPVAGKRRTGKKPGAAEEKLKGAATAVPAASRSXXXXXXXXXXXXXGARAGGGIAESALPTAGGSHAKKRPRSPLPSPRQEEEGGRPERHGEAKRRAAAAPRGGRLAADLALLPARQQRQTEPRGGVVV-DANATAAARTSHAGKPTPSASSKSGGSATPADEEEGPSMAALFGEEEDNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTG--VADGAMPSAAAAAAPATKSYPPLQTAPEKKPAWREGERYGVVLGESFYGSGXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXTGENNPGQYVHLKYDFVPGRTNLDVPATLRQRPLTENEGRWRGXXXXXXGDVGGGGQQQRWAAEMEYESRDPSNPEPVRFTGDAVR 999

[Close]

BLAST of Ec-00_003540.1 vs. uniprot
Match: A0A6H5JHA5_9PHAE (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA5_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.960e-98
Identity = 201/215 (93.49%), Postives = 202/215 (93.95%), Query Frame = -2

Query:   11 MAWCRLDLLVRLTLSISLYLFVQCLSILASDDLALPSQDRPRGNQKRAQVTSLEETTDGPARHGMHMKAASLTPTARGSSVAALGSAGASLAVASGRSLRSFTPSGSGRKWQHSSRRGSSERLNGSVGSSCGDGWNNRSVAGGGXXXXXARGALSSLAPAVAPRAGTSALFVVSSVDPAVSLATTPEATLAGSAAAGAEGSVFAAERARCRCAVR 655
            MAWCRL LLVRLTLSISLYL VQCLSILA+DDLALPSQDR R NQKRAQVTSLEET DGPARHGMHMKAASLTPTARGSSVA LGSAGASLAVAS RSLRSFTPSGSGRKWQ SSRRGSSERLNGSVG SCGDGWN RSVAGGGXXXXXARGALSSLAPAVAPRAGTSALFVVSSVDPAVSLATTPEATLAGSAAAGAEGSV AAERARCR  VR
Sbjct:    1 MAWCRLALLVRLTLSISLYLVVQCLSILAADDLALPSQDRSRANQKRAQVTSLEETKDGPARHGMHMKAASLTPTARGSSVAVLGSAGASLAVASRRSLRSFTPSGSGRKWQLSSRRGSSERLNGSVGKSCGDGWNKRSVAGGGXXXXXARGALSSLAPAVAPRAGTSALFVVSSVDPAVSLATTPEATLAGSAAAGAEGSVVAAERARCRPLVR 215

The following BLAST results are available for this feature:

BLAST of Ec-00_003540.1 vs. uniprot

BLAST of Ec-00_003540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FRR3_ECTSI	0.000e+0	69.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JP83_9PHAE	0.000e+0	74.53	EAF domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JHA5_9PHAE	1.960e-98	93.49	BPL/LPL catalytic domain-containing protein n=1 Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:3514912..3527005 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	4059
Hectar predicted targeting category	mitochondrion
Gene id	Ec-00_003540.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_003540	Ec-00_003540	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 3514912..3527005 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003540.1	Ec-00_003540.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 3515521..3527005 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003540.1.1	Ec-00_003540.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3514912..3515827 +
Ec-00_003540.1.2	Ec-00_003540.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3518418..3518653 +
Ec-00_003540.1.3	Ec-00_003540.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3518859..3519031 +
Ec-00_003540.1.4	Ec-00_003540.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3519758..3520042 +
Ec-00_003540.1.5	Ec-00_003540.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3521165..3521354 +
Ec-00_003540.1.6	Ec-00_003540.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3522376..3522545 +
Ec-00_003540.1.7	Ec-00_003540.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3522886..3523027 +
Ec-00_003540.1.8	Ec-00_003540.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3524964..3526795 +
Ec-00_003540.1.9	Ec-00_003540.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 3526891..3527005 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003540	5UTR:Ec-00_003540.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 3514912..3515520 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_003540.1	CDS:Ec-00_003540.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 3515521..3515827 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:3514912..3527005+
coding sequence from alignment at chr_00:3514912..3527005+

mRNA sequence

>Ec-00_003540.1 ID=Ec-00_003540.1|Name=Ec-00_003540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1150bp
MLRVSLTSKSSRHQAMQTWTSRLPLARHSTLGTRHTLSQNSGSQFGSLRP
EPARDSTHNTSPRHPSSRGQRERSASECTVSRSLLEGIGGRLPCRINRSG
SLGLRVWRQDATMKPVGNGEGEEEEEDGEIQEGEIPTNSKGQAATPGSTA
GEALPHQGLQQIEQARSLLEAAPGDGGGVDRVKKLLVQSKAAYLQAASAL
AAAGGENTDVAAISQGAPQAALICVASEAVFPEAIALVRWFCSKHVASLC
EVAQAMEIEAKRLEKQGKSKSKSKSKNRSSKSSSGVAAGSGGQAQDEGSG
TGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKA
IERLSRECSADPSVGKAAARLRGLTAAACFAPVSPALDGGGEADENSQTT
EQAAAAPNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIG
ALRRVATLAPRTYATIAEAFAAALRCMTRGAVGGPEGEWTRRPALNDANV
RHTLFACCCNLAEGLPAAACPPPDDSRLRGRGKLVSALKACHVMRGFVAD
GHPLPLATAQPGGGSGEAAETAAGVVVGGSGAAGIGSACASSCVVTAATS
STTGSASKTAGDCCAAAEAATTVEADCAEAAVAAESAADATAAVPVAAAA
AAAAAVAAAHAAVEGDLEPGHERGAGVVDGRSSDGSFSKSAAASDAAVAS
LIPATGERTKAPAVQSPAKQSVAGKRRTGKKPRPAEKKSKGAATAVPATS
RSEAAAPPPAAGPTEGGARAGGGIAESALPTAGGSHAKKRPRSPPPSPRQ
EEEGGRPEQHGGAKRRAAAAPRGGRLAADLALPPARQQQPPEPRGGVVVD
ANAAAAARMSHAGKPTPSAGSKSGGPATPAGEEEGPTMAALFGEEEDNEP
ESATAAAEADVEAPGAAVLAAAAAALAVEVAAATAAATATAPAAGIDVAD
GAMPSAAAAPATKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGGGGS
TIAASSKSGGRRAKGGNRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLD
VPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSN
PEPVRFTGDAVRILCARGRWGTFWGAHPLGRLNEMPAAGGYCRIRKAVS*

spliced messenger RNA

>Ec-00_003540.1 ID=Ec-00_003540.1|Name=Ec-00_003540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4059bp|location=Sequence derived from alignment at chr_00:3514912..3527005+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGGCCCTTCCCTCTCACAGCACACCTGCAACGAGCGCGTTCAGCCGCAAA
GACAGATCCTTCCGCGCCTGCAGCAGCACTCCCTGCCAGTGTTGCCTCGG
GTGTGGTGGCGAGAGAAACAGCGGGGTCGACGGAAGAAACAACGAACAGT
GCACTTGTGCCAGCACGCGGAGCGACCGCAGGGGCAAGGGACGACAGAGC
TCCCCGTGCCCCGCCGCCGCCGCCACCACCACCAGCTACGCTCCTGTTGT
TCCAGCCGTCACCGCAACTGCTGCCGACACTCCCGTTCAACCGCTCGCTA
CTGCCGCGGCGGCTGCTGTGTTGCCACTTCCGACCGCTACCGCTCGGTGT
GAAGCTCCGGAGGCTTCTTCCGCTTGCTACTGCCAACGAAGCCCCTGCGG
AACCAAGTGCAGCTACCGATGATCCTCTTGCTGTTGGTGTGAGCGATGCT
GCCTTCATATGCATACCATGCCGTGCAGGCCCGTCCGTGGTTTCCTCTAA
ACTCGTGACCTGAGCGCGTTTCTGGTTCCCTCTAGGGCGGTCTTGCGAGG
GCAACGCAAGGTCGTCGGAAGCCAAGATAGACAGGCACTGGACGAATAGG
TAGAGGGAGATGCTGAGGGTGAGTCTCACGAGCAAATCGAGTCGGCACCA
GGCCATGCAGACATGGACTAGTCGCCTACCTCTAGCTCGGCACTCGACAC
TCGGCACTCGGCACACACTCTCGCAAAACAGCGGTTCTCAATTTGGTTCT
CTCCGTCCCGAACCGGCACGCGACAGCACCCACAACACCTCCCCACGCCA
CCCCAGCTCCCGTGGACAGAGAGAGCGGAGTGCCAGCGAATGCACAGTGA
GTCGATCGCTGCTGGAAGGGATTGGAGGGCGTCTTCCGTGTCGAATCAAC
CGCTCTGGCAGTCTAGGTCTCCGGGTGTGGCGACAAGACGCCACGATGAA
GCCCGTTGGGAACGGCGAGGGGGAGGAGGAGGAGGAAGATGGGGAAATCC
AAGAGGGCGAAATCCCTACCAACAGCAAGGGCCAAGCAGCTACCCCCGGG
AGCACTGCCGGAGAGGCGCTCCCGCATCAGGGCCTCCAGCAGATCGAGCA
GGCGAGGAGCTTACTCGAAGCTGCTCCTGGGGACGGCGGCGGCGTCGATA
GGGTCAAGAAGCTCCTTGTGCAGTCGAAGGCGGCATATCTTCAGGCAGCC
AGCGCGCTGGCAGCAGCTGGAGGAGAGAACACGGATGTGGCCGCCATCTC
CCAGGGAGCGCCTCAGGCGGCCCTCATCTGCGTGGCCTCGGAGGCGGTCT
TCCCTGAAGCGATAGCGCTAGTCAGGTGGTTCTGCTCCAAGCATGTCGCC
AGCCTGTGCGAGGTGGCCCAGGCCATGGAGATCGAGGCGAAGCGGTTAGA
AAAGCAGGGCAAGAGCAAGAGCAAGAGTAAGAGCAAAAACAGAAGCAGCA
AGAGCAGCAGCGGCGTCGCTGCCGGCAGCGGGGGACAGGCCCAGGACGAA
GGCTCAGGCACAGGCGCCGAGAGGGCCATCCGGCTGCTGCGTGTCCTGCT
TGGCTCCTTCAACGCTTTCCTCCAGCAGTCTTCTCTGGGGAGCGGGATGT
TCAGCACCAGCGCGCACGTCCGCGTGCTTGACATAGCCGTGAGCCTGGCG
AGGAAGGCGATCGAGAGGCTCAGCCGAGAGTGCTCCGCCGACCCGTCGGT
AGGCAAGGCGGCGGCCAGGCTGAGGGGGCTCACGGCGGCCGCCTGCTTCG
CGCCCGTGTCTCCTGCCCTCGACGGCGGTGGCGAAGCCGACGAAAATTCG
CAAACGACAGAACAAGCGGCAGCGGCGCCGAACTCAGACAACCTTGACAG
GATGGGGAAAAAAGACGTGGACAAGCTCTTGATGTGCGTCTCGGGGGGCG
AGGCCAAGAAGGACGAGGTGTACCTGTCTCTGCCCTGCATCTGCATCGAG
GCGATAGGGGCCCTTCGAAGGGTTGCGACTCTGGCGCCGCGGACGTATGC
CACCATAGCCGAGGCCTTCGCGGCGGCGTTGCGGTGCATGACTCGGGGAG
CCGTCGGGGGCCCTGAAGGGGAATGGACCCGCCGGCCGGCGCTCAACGAC
GCCAACGTTCGGCACACGCTGTTCGCCTGCTGCTGCAACCTGGCCGAGGG
ACTGCCCGCCGCCGCCTGCCCGCCGCCGGACGACAGCCGCCTCCGGGGGC
GCGGCAAGCTCGTGTCCGCCCTCAAGGCCTGCCACGTCATGCGGGGCTTC
GTCGCGGACGGCCACCCCCTTCCTCTTGCCACCGCCCAACCCGGCGGCGG
CAGCGGCGAAGCCGCCGAGACGGCGGCCGGGGTGGTCGTCGGTGGAAGCG
GCGCCGCCGGAATCGGGAGCGCCTGCGCTTCCTCATGCGTTGTCACGGCC
GCCACCTCCTCGACGACCGGATCTGCCTCGAAGACTGCCGGTGACTGCTG
TGCTGCTGCTGAAGCTGCTACTACTGTTGAAGCCGATTGCGCTGAAGCTG
CTGTTGCGGCTGAGTCGGCGGCGGACGCTACAGCGGCCGTTCCAGTCGCT
GCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTCATGCCGCCGTTGA
GGGCGATTTGGAGCCTGGACACGAAAGGGGTGCGGGCGTCGTCGACGGGC
GTAGCAGCGACGGGTCTTTCTCGAAATCCGCCGCCGCTTCTGATGCGGCC
GTCGCGTCCCTTATTCCCGCCACCGGGGAGAGAACGAAGGCACCGGCCGT
GCAGTCACCTGCGAAACAATCGGTGGCAGGAAAGAGGCGGACGGGGAAGA
AACCGCGGCCGGCAGAGAAGAAGTCGAAAGGCGCGGCCACGGCCGTTCCG
GCAACGTCACGATCAGAAGCAGCAGCACCACCACCAGCAGCAGGCCCGAC
AGAAGGTGGTGCGAGAGCTGGCGGGGGCATCGCCGAGTCTGCCCTACCGA
CGGCAGGCGGCAGCCACGCCAAGAAGAGGCCCCGCTCCCCTCCTCCCTCC
CCTCGACAAGAAGAAGAGGGAGGACGGCCAGAACAGCACGGAGGAGCCAA
ACGCCGCGCTGCTGCCGCCCCCCGTGGCGGGCGACTCGCGGCCGACCTGG
CGTTGCCTCCCGCAAGGCAACAACAACCGCCGGAACCGCGGGGCGGCGTC
GTCGTCGACGCCAACGCCGCCGCGGCAGCGCGCATGTCGCATGCAGGCAA
GCCGACGCCGTCGGCCGGCTCGAAGAGCGGCGGTCCGGCGACCCCGGCAG
GCGAAGAAGAGGGTCCGACGATGGCGGCTCTCTTCGGAGAAGAAGAAGAC
AACGAACCGGAGTCGGCGACAGCAGCAGCGGAAGCCGACGTCGAGGCGCC
GGGGGCGGCGGTGCTAGCGGCGGCGGCGGCAGCGCTGGCGGTGGAGGTGG
CGGCGGCGACCGCGGCGGCGACGGCGACGGCACCGGCAGCGGGAATCGAC
GTCGCAGACGGGGCGATGCCGTCAGCGGCGGCGGCACCGGCGACGAAGTC
GTACCCGCCGCTGCAAACGGCGCCCGAGAAAATGCCGGCGTGGCGGGAGG
GGGAGCGGTACGGGGTCGTCTTGGGAGACTCGTTCTACGGCAGCGGCGGT
GGTGGTAGTACTATAGCCGCAAGCAGTAAGAGCGGTGGTCGTCGTGCCAA
AGGAGGCAACAGGAGAGGTCTTGTCGGTGATGACGATACGGGTGAGAGCA
ACCCGGGGCAGTACGTCCACCTCAAGTACGACTTCGTGCCCGGGCGGACG
AACCTGGACGTGCCGGCCACGCTGCGGCAGCGGCCACTGACGGAGAACGA
AGGGAGGTGGAAAGGCCGCGGCAGCGGTACCGGCGGCGACGTCGTCGGTG
GCGGGCAGCAGCAGCGGTGGGCGGCGGAAGTGGAGTACGAGAGCCGAGAT
CCCTCCAACCCGGAACCCGTTCGTTTCACCGGGGATGCTGTAAGAATATT
GTGCGCTAGAGGCAGATGGGGGACGTTTTGGGGGGCGCACCCACTCGGGC
GGTTAAACGAAATGCCGGCAGCCGGCGGGTATTGTCGCATCAGAAAGGCA
GTATCCTGA

protein sequence of Ec-00_003540.1

>Ec-00_003540.1 ID=Ec-00_003540.1|Name=Ec-00_003540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1150bp
MLRVSLTSKSSRHQAMQTWTSRLPLARHSTLGTRHTLSQNSGSQFGSLRP
EPARDSTHNTSPRHPSSRGQRERSASECTVSRSLLEGIGGRLPCRINRSG
SLGLRVWRQDATMKPVGNGEGEEEEEDGEIQEGEIPTNSKGQAATPGSTA
GEALPHQGLQQIEQARSLLEAAPGDGGGVDRVKKLLVQSKAAYLQAASAL
AAAGGENTDVAAISQGAPQAALICVASEAVFPEAIALVRWFCSKHVASLC
EVAQAMEIEAKRLEKQGKSKSKSKSKNRSSKSSSGVAAGSGGQAQDEGSG
TGAERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKA
IERLSRECSADPSVGKAAARLRGLTAAACFAPVSPALDGGGEADENSQTT
EQAAAAPNSDNLDRMGKKDVDKLLMCVSGGEAKKDEVYLSLPCICIEAIG
ALRRVATLAPRTYATIAEAFAAALRCMTRGAVGGPEGEWTRRPALNDANV
RHTLFACCCNLAEGLPAAACPPPDDSRLRGRGKLVSALKACHVMRGFVAD
GHPLPLATAQPGGGSGEAAETAAGVVVGGSGAAGIGSACASSCVVTAATS
STTGSASKTAGDCCAAAEAATTVEADCAEAAVAAESAADATAAVPVAAAA
AAAAAVAAAHAAVEGDLEPGHERGAGVVDGRSSDGSFSKSAAASDAAVAS
LIPATGERTKAPAVQSPAKQSVAGKRRTGKKPRPAEKKSKGAATAVPATS
RSEAAAPPPAAGPTEGGARAGGGIAESALPTAGGSHAKKRPRSPPPSPRQ
EEEGGRPEQHGGAKRRAAAAPRGGRLAADLALPPARQQQPPEPRGGVVVD
ANAAAAARMSHAGKPTPSAGSKSGGPATPAGEEEGPTMAALFGEEEDNEP
ESATAAAEADVEAPGAAVLAAAAAALAVEVAAATAAATATAPAAGIDVAD
GAMPSAAAAPATKSYPPLQTAPEKMPAWREGERYGVVLGDSFYGSGGGGS
TIAASSKSGGRRAKGGNRRGLVGDDDTGESNPGQYVHLKYDFVPGRTNLD
VPATLRQRPLTENEGRWKGRGSGTGGDVVGGGQQQRWAAEVEYESRDPSN
PEPVRFTGDAVRILCARGRWGTFWGAHPLGRLNEMPAAGGYCRIRKAVS*

mRNA from alignment at chr_00:3514912..3527005+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_003540.1 ID=Ec-00_003540.1|Name=Ec-00_003540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12094bp|location=Sequence derived from alignment at chr_00:3514912..3527005+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGGCCCTTCCCTCTCACAGCACACCTGCAACGAGCGCGTTCAGCCGCAAA
GACAGATCCTTCCGCGCCTGCAGCAGCACTCCCTGCCAGTGTTGCCTCGG
GTGTGGTGGCGAGAGAAACAGCGGGGTCGACGGAAGAAACAACGAACAGT
GCACTTGTGCCAGCACGCGGAGCGACCGCAGGGGCAAGGGACGACAGAGC
TCCCCGTGCCCCGCCGCCGCCGCCACCACCACCAGCTACGCTCCTGTTGT
TCCAGCCGTCACCGCAACTGCTGCCGACACTCCCGTTCAACCGCTCGCTA
CTGCCGCGGCGGCTGCTGTGTTGCCACTTCCGACCGCTACCGCTCGGTGT
GAAGCTCCGGAGGCTTCTTCCGCTTGCTACTGCCAACGAAGCCCCTGCGG
AACCAAGTGCAGCTACCGATGATCCTCTTGCTGTTGGTGTGAGCGATGCT
GCCTTCATATGCATACCATGCCGTGCAGGCCCGTCCGTGGTTTCCTCTAA
ACTCGTGACCTGAGCGCGTTTCTGGTTCCCTCTAGGGCGGTCTTGCGAGG
GCAACGCAAGGTCGTCGGAAGCCAAGATAGACAGGCACTGGACGAATAGG
TAGAGGGAGATGCTGAGGGTGAGTCTCACGAGCAAATCGAGTCGGCACCA
GGCCATGCAGACATGGACTAGTCGCCTACCTCTAGCTCGGCACTCGACAC
TCGGCACTCGGCACACACTCTCGCAAAACAGCGGTTCTCAATTTGGTTCT
CTCCGTCCCGAACCGGCACGCGACAGCACCCACAACACCTCCCCACGCCA
CCCCAGCTCCCGTGGACAGAGAGAGCGGAGTGCCAGCGAATGCACAGTGA
GTCGATCGCTGCTGGAAGGGATTGGAGGGCGTCTTCCGTGTCGAATCAAC
CGCTCTGGCAGTCTAGGTGAGCAGCAGCCAGTAGCACTACTGGCCCTGCA
CAGGCTTGAGGGCAAAGCTCAGAGCGGGAAGGAACGAAGGAACCCTCCCG
CTGCCGTTGTCAGTTGAGAACACGCGCAGCAACCCAAAATAAAGTCAATG
TCCCCCGCGTGAGCGTGTGAGTGTATAACGGCGAGCATGTCTTGTGCGAG
CTAGTTGCAATCACGTCAGCATGAACCCCCTGCGCCATGCGTGACCCGCA
GCATGAGTGTTTGCCGCGATGCCGTCTCTCGTTCGTCCAACACAACAGTC
TCGTCTCCATTGTCAATAGTCTGCACAGCAGCCAATGATAGGCTGTCCAC
CACACCGTTCCCCCCGCTACGGTCACAACTTGCAGCGCTTCTAGCCGGGG
GGTGCCCTTGCCATGCATGTGGTTATTTTGGGGGTTCCCTTTGTGCTCAC
TCGAGGTGCGCTTGGCCCGTGGACGCTGCTGCCGCCGGCCGGTGGTCGTT
GAATATTCCGCACGACCCCGAGAAAACAGCAACGGCTCAACACAAACAGC
GTGGATATATGTCAGTCTACTGTACTGTACCTTGAAAGTTTAAGTTTCCC
GGTTTTGATACCCACACAGTTGTGAGACCTACGAAATAACTTCTAACGTG
ATTGCCACTCGATTCATGCATACCTGCCACCCGTCCCCACACCTGGAGCG
AATGGCAGCTATGGATGACACCATTGTGCACGAAAGACCTGTAGATAGCG
CGGGGTAATGAGCCACGGGGTAGCCGACTCAATACCTTGCAGTAGTCTAT
CTGTGACACCTTTTGCGGTGGCGAGTGCACCCGGCCGTTGAATATTGAAC
CCGAGTCATCATCAACAACAAGGACATAAAAGAGGCTCTTCCTCTGCAAC
GCACGGACGGCCCTCGGGATTCGTACGCATACAGCAGTAGTCTTTCCGTA
GATGACACAAGATACCACACCCTGGATCAACTTCCAAAGCTCGGTTGCTC
CACACCACCGAGAGTGGCGGTGCCGAAAATGGTGGTGTGGGAACCGTCTC
GTCAGGAGCTTTCCGACAACGTCTCGCTGGGTTTGCGCATCCTGCTCGTC
GTGGAATAATCTAGCTTAAATATATCGATACACGGGGGTGTGGTACCTTA
TGTCACTGACGGTACAGCAGTAGACCGGTGTGCCATATGCATATGCATAC
GTGCGATCCATATCGGAGGTGACCCCTCCCCGCACACCGAAGCAACAGCA
ATAACAAATGTATGCGCCACGAGCTGTGTCCATGCTCCGTGTTGTGTGGC
GATTGATACAGACCAGGAGGATCTAGGACCCTCAGAACTTGCCAGCGCGA
GAGTGTGGGACAGCCCGAAAAAAACCCGCCGCGTCTGCTGGGATCAGTCG
TATGATTTTTCTCCTCTGGCCAAAGGTTGGGTTTTACTGATGATCCCTGT
CCACACACCTAAGCAACAGCAATGACAATGGCATCCGCCACTAGCTCTGT
GTATGGCTCCCTTCCCCCGCCAGCTGTCTCGTCAATCGGTGTTACGTGGT
TCGCTGAGTGCTTCCTCTGTTTCTCCCGGTGTAAACCAAGCAACCGCGTG
TGTCTGTTGGGTGGGAGATCGACGATGCCTTTGCTTGCATTTTCTCTACA
ACTCCGCGGGGGTCGGGGTGGAGATTTCCTATGTTATTTGGATGCAGATG
CCGGTGACCACGGCCATCTGTTGTCGGAGCACGACCAAACCGGTGTGGTG
AAGATCGCCCTATTTTTCTTGTTCCTCACAAGCCGGCAGATCGTCAATCG
GTGCTCTTTAGACCTCGTGCTGGTCGAAAAAGATGCAAAATTCAGGCGGT
CGTTTATGCAACTTGGGGCCCTGGTAGATAGAGCCTGTTTTTTTCCTCCT
CAGACGGAGGGAAAAGAACGGTCGCGCTTCGCGCTCCGCGGCTCGCTACA
ATTTTCGTAGATTCGCAGGCTCGCATCCGTTGGCAGAACCTACGCATGTG
CTTGTTTTGTCTCATCTGTAAACTATCGCCCCCCCCCCTTCCCCCCTCGA
GTTTGCCATCGGGGTTTGGTTTTCGTCGCTTGGCAGCGACGTTGTAAAAC
AAGCCGATCACTTCGTGAGCTCGACAACCAGGTTACCGCTTCTTTTTTTT
TGCCTTTGGTTTTTATTTTTGCGGTAACCACCAATGATGGTCGAGTACAT
GATGTTGTGCGGGGTCGAAAACCCTCACTCCGCGCAAAGGGGATGATCGC
ACCACGTTGTGTTAAATTGGTCAAGCACCCTCGAGGCAGTTACACAGTGC
TTACAACTGTCTATGGAAGTGGAAGCACCAGAAAATATATGAAGTCATAC
GCAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGCCGAACACCCT
GAGCAGGATGCAGCGCACCCTTCACGCGACTCACCGAATACCTCACGGCG
CTTCGCGCTTGGTAATATGAGAGCCCGGTCCGGTGCGAAGCCCGCGTGCT
CCGTCTCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGGCTACGGCA
TGCACGACTATGAGTACCACCCCCCCCCCCCGCCTTCTGTTTTGTCGTGT
GTACAGGTCTCCGGGTGTGGCGACAAGACGCCACGATGAAGCCCGTTGGG
AACGGCGAGGGGGAGGAGGAGGAGGAAGATGGGGAAATCCAAGAGGGCGA
AATCCCTACCAACAGCAAGGGCCAAGCAGCTACCCCCGGGAGCACTGCCG
GAGAGGCGCTCCCGCATCAGGGCCTCCAGCAGATCGAGCAGGCGAGGAGC
TTACTCGAAGCTGCTCCTGGGGACGGCGGCGGCGTCGATAGGGTAAGCGT
GGGTGTGCCACAGACTACACATGAGGTGCTCGTTTTATCTGCCTGTTGCG
CGTTCTCATGCTTTGAGCATGAGCACCGGAAACCTACAGCTTGATACTAA
CCTTCACGTATTATGGATGAAGACTGAGCGACAATCGATGGACGCCGTTG
TAATGCCATGAATGGAACTCCGTACCCCCTCGTCCGTCTCCGAACAGGTC
AAGAAGCTCCTTGTGCAGTCGAAGGCGGCATATCTTCAGGCAGCCAGCGC
GCTGGCAGCAGCTGGAGGAGAGAACACGGATGTGGCCGCCATCTCCCAGG
GAGCGCCTCAGGCGGCCCTCATCTGCGTGGCCTCGGAGGCGGTCTTCCCT
GAAGCGATAGCGCTAGTCAGGTATACGCTTTACCCGCAGCGATGCTGCTG
TATGTGGTCTTTAGTCCTAGTAGTCAGGTATTTGTTGTCAAGCTGACGCA
TGTCATGCGCATGAATTGTCTCCGGCTGGAATCCGGCGTGCCGTCTGCTT
GAATTTCGGGGGTGGGGACCTCCATTGAATAGCTAACGCTGTATCAACAT
GGATGCTTCATTCATGCATGACCTTGTGTCGTCTCTGCCCATCTATCGAG
CTATCTATGTGGGTATATGGCTGTATGGGAATGTCATCGTCGCACACCAT
AGTGGAGGCACCGACTGGTTTGTAACTAGCGATGCTGCTTTAGGTCGTGT
TTATTCACTCGAGCAGGGTCTCTTCGGTTGAATAGTCGGAACGGAAGGGG
GCGCCGGAGCGGAGTCGAAGGTATTCTTGCCATGGTACGTTAGCTCGATT
GCCACCGGTCGTTCTGTCCGTCAAATAGGAACCGTTGGTTCTCCGCCGCT
GCTGCTGCCGAGAACGCTGGTGTTGACATACTGTTGCCGAAATCGACTGG
AAACAGCTGCAGCATGTTTAGACGCTACAAAATGGGTGCGGTTTTCTTGA
GAACACACAGGTCTTGCTCGGTGTAACTCTTTGTGCCTCTTTGTTCTCTC
GCCGTTTGTCGCAGATGCTCTCTGGGCTGTTTCTAATGCTCTTGTCCTTG
GTGTTGGTGGTACGAATGTTGATTGTGACGTTGTGATGCACCTCAGGTGG
TTCTGCTCCAAGCATGTCGCCAGCCTGTGCGAGGTGGCCCAGGCCATGGA
GATCGAGGCGAAGCGGTTAGAAAAGCAGGGCAAGAGCAAGAGCAAGAGTA
AGAGCAAAAACAGAAGCAGCAAGAGCAGCAGCGGCGTCGCTGCCGGCAGC
GGGGGACAGGCCCAGGACGAAGGCTCAGGCACAGGCGCCGAGAGGGCCAT
CCGGCTGCTGCGTGTCCTGCTTGGCTCCTTCAACGCTTTCCTCCAGCAGT
CTTCTCTGGGGAGCGGGATGTTCAGCACCAGGTGAGGGCGCGCAGAGCAG
CTTTTTCTCCATGCCTTTTTTTGCATCTTTATTTACTTGTATTTCCTTTT
TTTTATATCTTACGATCTACAAGTTATGCCGAGTGTGGTTCGTGCGTCAT
TGTGTAGGCTGTTTGCGACGGTATTTCGGTGGGGGTCCCTGTTTGTGCTT
GCTTATTTACGGCCGGTTGCCCTGTTTGAGGCCGGTGAAATCGGTCGGCG
CAAATGGAATATTCAAGTTGGCTCATACTCTGAACAAGGCCGGGGTTCCT
GTTGAAGGCCGGTGTTTTGTCGTGACACATGGCGGCCTTAATCAGGGACA
TCGACTGTGCAGAGAAGACATTCTCCTGTGCTATCCTGCACTCCGGAGGT
TGTATCAAGCAAGCCCTACCAATCCGCGCGCCCTTATCGACGATGTATGG
CTTGGTCGAAGATTTCGGTGCCAACGTTCGAACGAAAATGCTCGCTGAAC
ACAAGCCTTTCCGGCTGTGGTCGTGGGGGCGCATGATGAGAAAGACAGGA
ATTTCCGGGGGAGGGGATGCTCCGTGAGTGAGTTACTGCGCAATGAACCC
GCTGGAACCGGGTTTTTCGCCTCTTGTACACAATGCAACCATGGAACAAG
TAAGGACTGTACCCCTCAGCAGCAACAAGCTGGAACACCTTGGGGTGTTG
TTGGCGATGGAGCACATTTTTTATCCTATCCGAAAACGCCCCTTGTTTGC
AGAGGATAATGGTGAATGTCCACACCCCGGAGCTCTCTCTCTCTCTCTCT
CTCTCCCGCTCGACATTGCCGATGATTTCGAAAAGCCCGGTAGGAAGATT
GGGGTGCCACGAGCAAAACGCACACCACAGCAGTCACCCTAATCCCAAAC
CTATCAGCAACAACAATAACAACAACGGCAAAAACGCAACTATGTTGCCC
CGCTGCGTGTTTGTTTCTGCGCGCTTGTTTGCGGCTTTTCACGCCGTCCC
GCGGAGGCGTTGACTCTCGCGCTGCAAGAACATGCACGATATACCTGTAC
CTGGACAACTCAGCCGCACACCCTCCGTCCCCTTCCGTCTTCGTCGTTTT
TCTTTTTTTTTTTACTTTTTTTTTCCGTCACACCCCTATCATGATGCCGT
CAGCGCGCACGTCCGCGTGCTTGACATAGCCGTGAGCCTGGCGAGGAAGG
CGATCGAGAGGCTCAGCCGAGAGTGCTCCGCCGACCCGTCGGTAGGCAAG
GCGGCGGCCAGGCTGAGGGGGCTCACGGCGGCCGCCTGCTTCGCGCCCGT
GTCTCCTGCCCTCGACGGCGGTGGCGAAGCCGACGAAAATTCGGTGAGAC
CTTGCGTTCTGTTGTACCGGCTGCTTGCCGCTTGCTCCGCTTTGGATCTT
GATGTTTTCGGGCCGTACCGTTGCCGCTGCCGCTGCCGCTGCCGCCGGCG
ATAATTGTGGGTTGGCAGCCTGCAATGGTGCCCTGCCATTTTTCGCAGTC
TATTTATTTTTCCTGCCCGAAGGGTGGGAATTTTTCATGATGGCGATGGC
GATGTTCGCTACGGCGCTGCCGAGCGGCGCATACTTTGATGTCCCTCTTC
TTCGACGCTATGTCGTTCGGTCGGCGAGAGGGATTCGTTCGAATGGGTCG
TAATATATGTGTTTTTGACTGACTACGGGATGCACCCCCCTGGGAGCGGT
ACAGTCGACCCCGCCTTAAGAATACCCGTGTTTTTGTTTTTTTGAAAATT
TCCTGAACGCAGGGAAGTGTCCCTGAGGCCGGAACCTCCCCTTGTTTATT
GTATTCCGTGGGGCACCCTGCTTCTGAGATTTGGTTTTGTCCATAAACGG
GGAGTGGACTTTAAAATGCGAGTGTCTACAAAAGCTGTTGCGTAGGACTG
TGAAAAAACTTGCCGGCTGGTCCTGCTTCACACGCTGTCCGCCCTGCTTT
TCGACTCCGTCCTTCGATCCCAAACCACCCGAGGTAGGGATTGATACACT
CATCGCATACTAGGTGCTTGCCTTCGCAGTTGCAGTGATTCCGCTTGGAC
CGTTCCGTTCTGATCGCAAACCCGAACCCGGAGAAAGTTGGAGAGAGAGG
TGGTGCACCAAAAATTAATTTGAGCCCAGGATCCCACACAACAACAACAA
GATTCACATTCACAACTTCACTCCCTGGAAAAGAGTGTGAGACAACGAGA
AAGAAAGGAGGAGGAGCCGTTCTTCCACCAATGAACATACCTGTTACGAC
GAATACTTGGCCTAACGTGGCGTACACTGGCGGTGGTGCGCGTGCTTTCG
CCGTCTGTATCGTTACGACTGCCAGGCGGCGGCGGCGGCGGCGGCGGAAC
TACGACGACAACAGCAAACGACAGAACAAGCGGCAGCGGCGCCGAACTCA
GACAACCTTGACAGGATGGGGAAAAAAGACGTGGACAAGCTCTTGATGTG
CGTCTCGGGGGGCGAGGCCAAGAAGGACGAGGTGTACCTGTCTCTGCCCT
GCATCTGCATCGAGGCGATAGGGGCCCTTCGAAGGCAAGAGAAGAGTGTG
CGGGAGAGGGGAAGGGTGGGTTCACTTCAATGTAGAGGTTTGTCGTCGTG
AGGAACACGTTCCTTTGTCTTGACACTCCGCACTTCTACCTATCCGGTTG
CTCTTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCGCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTATCTCTCTCTCTCTGTCTT
CCCCCCCCTCGCGATACACATCTCTTCATACATGCATGCATACCTCCCTC
GTTCACCGCTCTCCCCCTCTCATTCCCTCTGTCGTCGTGCTCCCTTGCCC
CTACTATCCTTCCACCCTCCCCAGGGTTGCGACTCTGGCGCCGCGGACGT
ATGCCACCATAGCCGAGGCCTTCGCGGCGGCGTTGCGGTGCATGACTCGG
GGAGCCGTCGGGGGCCCTGAAGGGGAATGGACCCGCCGGCCGGCGCTCAA
CGACGCCAACGTTCGGGTGAGGGCTTGCGGCAGCAGGCACGCCGGGAGCT
GTCTAGTCTGCGGCAGTTGGAACCGCCCCGGTTCGTCTTGTACGCGCGTG
CGCGCGCCAGGAAAGATACCATGATTGGACGGGTCCGAAAAATCGTTTCC
GACGTGGATGGGATGCCCTTAGGGTGCTTCTTATCGACCAATAAAACACG
AAAAAATAAACGAAACCGTGTTTTCTTGAACACATATGGAGGCGTTTTTC
CCCGAAAGCGTGAAAAGAAGGAGCCGTGTTTTTTTGGGGCTTGCTACTTA
AACGAATTCGTGTTTTTGACAGAAGCATCGGACAAGCGCACCGCGGGCGC
TGTAACATCACTGAGAACGCTAGAAAGACCTGCCAGACTCACGTCCAGGT
CTGTTGTGGAGATGGACAAGCGGCAGAAGCGACGTTCAGTCCGTTCTTGG
TCCAAAACTAGACATTGCGTGGTGCTCTCGTCTTCAACTGCTGCTGTTGG
TGCTGGGGAATTTTTTTCGATCACACATAGCAAACACGGAAACAGTAGAA
CGAGTACAGCAGCACCACCAAGACCTCCAAAGCGCTGATTCCTTCGGTTC
GGCTGTCTATATGATACCACCTCCCGGCGCCGTCCTGCTTCGTGGGTATT
GAGTGCTTGGGTGCTGCTCAATAAGGTGTGTGAGAGACGTGTGCCACCTC
ACCAAAATGCCGTTGGAAAAATTGCGGCGAGATGATCTGTTTTTGGTCGG
ACACATCAACATCAATCCACGGCGTCACGCAGCAGTAGAGCAACAGGGCC
TCCAACACGCAAATTCTTTCGGATTGGCCATCTATGTGATGCTGGCCGTC
AGCGCGGCTGCCGCCCTATGATTGTTGAGCTCGTCTACCTTTGGGTAGGT
GGTGGTCAAAGATGGGAGTCGCAACCGTGAAAAATGAGCTGGCAAACTGA
AGAAATCGCAAGCAACACCCAGGTTGCGACACTCTGCCGTGCGCCTGTTG
TTGCTGAAAACTGAAAACAGCAGGCCGGGTGGACGGGATCTTTCTAAGTG
TGTTGTCCTCTGTGCCGGGTGCTGCTTATTGCGCTTTTATCGCTGCTCTA
TGGTGAGCAATACCATGTCAACCTGTTGTGTGCCGAGCAAAGCGTGTATT
CAGGGAAGGAAACGTACTTTTTGCGATGACATCACGAAAAGAACAAGCAA
AAAAAAGTCGGGTTTTCTTTTAACCGTTCCGTTTAAAAAAGAACGATTTC
GACGTTGCATTAATAATAACCCTTAGAACAAAGGGTCAGCTTTCGCGGTT
GACAACAGCAGCCATCTCTGGATTTTTGGGAGTTGGTTGTATGCACAGAC
GTTTAAGAAGGAGTGTTTTGCCGGAGACGGATGAGAGGCAGGGCGGTTCT
TACTTACCAACACTCTGTGTTTTGTGTTGTTTTGCGCGAAGGGTTTCCTC
TTTGTTTGATCTTGCGCGCGCGCGGCGGCTTCCTTGCCGAAAACACCGCG
TGAGTAGGACATAACGCATGACGCTTTGTAGGACAACACGCACGAAACGT
TCCTCCGTTGAAGATAGTGTGTTCGGCGCCCGCGCCTCTCTTGCGGACGA
CCCTGTTTAGTGTTGCCTGCTTTTCGCGCCGGCCGCACGCCGCCGCGCCT
CGCGCGATGTACTGCACTGCGGCGTGAGGCTGCGCCGGCGGGCTGTGTCA
ATGTCGCTCCGGTCGGCCTTACCGTTGACCCGTCCGCGCCACATCTTCTC
ACTGACATAGACCTCTCCCGTTTCGTACTGAACACCCCCAGATCGGCCCG
CCCGCCAAGGCGGCGCGATAACGTTGTCATTTTCCACCCATCTGTGTGGT
CATCGTGCTCCAATCTTACCCCTCTGCTGTGTATACCACGTGGGTGGGTG
TACTTTCGTCTCCGCGCGTGCTTGTGTCCACCTGTTTGTCTGTTGTGCGC
AGCACACGCTGTTCGCCTGCTGCTGCAACCTGGCCGAGGGACTGCCCGCC
GCCGCCTGCCCGCCGCCGGACGACAGCCGCCTCCGGGGGCGCGGCAAGCT
CGTGTCCGCCCTCAAGGCCTGCCACGTCATGCGGGGCTTCGTCGCGGACG
GCCACCCCCTTCCTCTTGCCACCGCCCAACCCGGCGGCGGCAGCGGCGAA
GCCGCCGAGACGGCGGCCGGGGTGGTCGTCGGTGGAAGCGGCGCCGCCGG
AATCGGGAGCGCCTGCGCTTCCTCATGCGTTGTCACGGCCGCCACCTCCT
CGACGACCGGATCTGCCTCGAAGACTGCCGGTGACTGCTGTGCTGCTGCT
GAAGCTGCTACTACTGTTGAAGCCGATTGCGCTGAAGCTGCTGTTGCGGC
TGAGTCGGCGGCGGACGCTACAGCGGCCGTTCCAGTCGCTGCTGCTGCTG
CTGCTGCTGCTGCTGTTGCTGCTGCTCATGCCGCCGTTGAGGGCGATTTG
GAGCCTGGACACGAAAGGGGTGCGGGCGTCGTCGACGGGCGTAGCAGCGA
CGGGTCTTTCTCGAAATCCGCCGCCGCTTCTGATGCGGCCGTCGCGTCCC
TTATTCCCGCCACCGGGGAGAGAACGAAGGCACCGGCCGTGCAGTCACCT
GCGAAACAATCGGTGGCAGGAAAGAGGCGGACGGGGAAGAAACCGCGGCC
GGCAGAGAAGAAGTCGAAAGGCGCGGCCACGGCCGTTCCGGCAACGTCAC
GATCAGAAGCAGCAGCACCACCACCAGCAGCAGGCCCGACAGAAGGTGGT
GCGAGAGCTGGCGGGGGCATCGCCGAGTCTGCCCTACCGACGGCAGGCGG
CAGCCACGCCAAGAAGAGGCCCCGCTCCCCTCCTCCCTCCCCTCGACAAG
AAGAAGAGGGAGGACGGCCAGAACAGCACGGAGGAGCCAAACGCCGCGCT
GCTGCCGCCCCCCGTGGCGGGCGACTCGCGGCCGACCTGGCGTTGCCTCC
CGCAAGGCAACAACAACCGCCGGAACCGCGGGGCGGCGTCGTCGTCGACG
CCAACGCCGCCGCGGCAGCGCGCATGTCGCATGCAGGCAAGCCGACGCCG
TCGGCCGGCTCGAAGAGCGGCGGTCCGGCGACCCCGGCAGGCGAAGAAGA
GGGTCCGACGATGGCGGCTCTCTTCGGAGAAGAAGAAGACAACGAACCGG
AGTCGGCGACAGCAGCAGCGGAAGCCGACGTCGAGGCGCCGGGGGCGGCG
GTGCTAGCGGCGGCGGCGGCAGCGCTGGCGGTGGAGGTGGCGGCGGCGAC
CGCGGCGGCGACGGCGACGGCACCGGCAGCGGGAATCGACGTCGCAGACG
GGGCGATGCCGTCAGCGGCGGCGGCACCGGCGACGAAGTCGTACCCGCCG
CTGCAAACGGCGCCCGAGAAAATGCCGGCGTGGCGGGAGGGGGAGCGGTA
CGGGGTCGTCTTGGGAGACTCGTTCTACGGCAGCGGCGGTGGTGGTAGTA
CTATAGCCGCAAGCAGTAAGAGCGGTGGTCGTCGTGCCAAAGGAGGCAAC
AGGAGAGGTCTTGTCGGTGATGACGATACGGGTGAGAGCAACCCGGGGCA
GTACGTCCACCTCAAGTACGACTTCGTGCCCGGGCGGACGAACCTGGACG
TGCCGGCCACGCTGCGGCAGCGGCCACTGACGGAGAACGAAGGGAGGTGG
AAAGGCCGCGGCAGCGGTACCGGCGGCGACGTCGTCGGTGGCGGGCAGCA
GCAGCGGTGGGCGGCGGAAGTGGAGTACGAGAGCCGAGATCCCTCCAACC
CGGAACCCGTTCGTTTCACCGGGGATGCTGTAAGGTACAATACAGGAGGA
GGATGTGACCATGTTCGTCGGCTTTTTTTTTGCTTTGTTCCTTTCTTTTC
GCGCTGTTTTGTTCACCTCGACCTTGTAGAATATTGTGCGCTAGAGGCAG
ATGGGGGACGTTTTGGGGGGCGCACCCACTCGGGCGGTTAAACGAAATGC
CGGCAGCCGGCGGGTATTGTCGCATCAGAAAGGCAGTATCCTGA

Coding sequence (CDS) from alignment at chr_00:3514912..3527005+

>Ec-00_003540.1 ID=Ec-00_003540.1|Name=Ec-00_003540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3450bp|location=Sequence derived from alignment at chr_00:3514912..3527005+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGAGGGTGAGTCTCACGAGCAAATCGAGTCGGCACCAGGCCATGCA
GACATGGACTAGTCGCCTACCTCTAGCTCGGCACTCGACACTCGGCACTC
GGCACACACTCTCGCAAAACAGCGGTTCTCAATTTGGTTCTCTCCGTCCC
GAACCGGCACGCGACAGCACCCACAACACCTCCCCACGCCACCCCAGCTC
CCGTGGACAGAGAGAGCGGAGTGCCAGCGAATGCACAGTGAGTCGATCGC
TGCTGGAAGGGATTGGAGGGCGTCTTCCGTGTCGAATCAACCGCTCTGGC
AGTCTAGGTCTCCGGGTGTGGCGACAAGACGCCACGATGAAGCCCGTTGG
GAACGGCGAGGGGGAGGAGGAGGAGGAAGATGGGGAAATCCAAGAGGGCG
AAATCCCTACCAACAGCAAGGGCCAAGCAGCTACCCCCGGGAGCACTGCC
GGAGAGGCGCTCCCGCATCAGGGCCTCCAGCAGATCGAGCAGGCGAGGAG
CTTACTCGAAGCTGCTCCTGGGGACGGCGGCGGCGTCGATAGGGTCAAGA
AGCTCCTTGTGCAGTCGAAGGCGGCATATCTTCAGGCAGCCAGCGCGCTG
GCAGCAGCTGGAGGAGAGAACACGGATGTGGCCGCCATCTCCCAGGGAGC
GCCTCAGGCGGCCCTCATCTGCGTGGCCTCGGAGGCGGTCTTCCCTGAAG
CGATAGCGCTAGTCAGGTGGTTCTGCTCCAAGCATGTCGCCAGCCTGTGC
GAGGTGGCCCAGGCCATGGAGATCGAGGCGAAGCGGTTAGAAAAGCAGGG
CAAGAGCAAGAGCAAGAGTAAGAGCAAAAACAGAAGCAGCAAGAGCAGCA
GCGGCGTCGCTGCCGGCAGCGGGGGACAGGCCCAGGACGAAGGCTCAGGC
ACAGGCGCCGAGAGGGCCATCCGGCTGCTGCGTGTCCTGCTTGGCTCCTT
CAACGCTTTCCTCCAGCAGTCTTCTCTGGGGAGCGGGATGTTCAGCACCA
GCGCGCACGTCCGCGTGCTTGACATAGCCGTGAGCCTGGCGAGGAAGGCG
ATCGAGAGGCTCAGCCGAGAGTGCTCCGCCGACCCGTCGGTAGGCAAGGC
GGCGGCCAGGCTGAGGGGGCTCACGGCGGCCGCCTGCTTCGCGCCCGTGT
CTCCTGCCCTCGACGGCGGTGGCGAAGCCGACGAAAATTCGCAAACGACA
GAACAAGCGGCAGCGGCGCCGAACTCAGACAACCTTGACAGGATGGGGAA
AAAAGACGTGGACAAGCTCTTGATGTGCGTCTCGGGGGGCGAGGCCAAGA
AGGACGAGGTGTACCTGTCTCTGCCCTGCATCTGCATCGAGGCGATAGGG
GCCCTTCGAAGGGTTGCGACTCTGGCGCCGCGGACGTATGCCACCATAGC
CGAGGCCTTCGCGGCGGCGTTGCGGTGCATGACTCGGGGAGCCGTCGGGG
GCCCTGAAGGGGAATGGACCCGCCGGCCGGCGCTCAACGACGCCAACGTT
CGGCACACGCTGTTCGCCTGCTGCTGCAACCTGGCCGAGGGACTGCCCGC
CGCCGCCTGCCCGCCGCCGGACGACAGCCGCCTCCGGGGGCGCGGCAAGC
TCGTGTCCGCCCTCAAGGCCTGCCACGTCATGCGGGGCTTCGTCGCGGAC
GGCCACCCCCTTCCTCTTGCCACCGCCCAACCCGGCGGCGGCAGCGGCGA
AGCCGCCGAGACGGCGGCCGGGGTGGTCGTCGGTGGAAGCGGCGCCGCCG
GAATCGGGAGCGCCTGCGCTTCCTCATGCGTTGTCACGGCCGCCACCTCC
TCGACGACCGGATCTGCCTCGAAGACTGCCGGTGACTGCTGTGCTGCTGC
TGAAGCTGCTACTACTGTTGAAGCCGATTGCGCTGAAGCTGCTGTTGCGG
CTGAGTCGGCGGCGGACGCTACAGCGGCCGTTCCAGTCGCTGCTGCTGCT
GCTGCTGCTGCTGCTGTTGCTGCTGCTCATGCCGCCGTTGAGGGCGATTT
GGAGCCTGGACACGAAAGGGGTGCGGGCGTCGTCGACGGGCGTAGCAGCG
ACGGGTCTTTCTCGAAATCCGCCGCCGCTTCTGATGCGGCCGTCGCGTCC
CTTATTCCCGCCACCGGGGAGAGAACGAAGGCACCGGCCGTGCAGTCACC
TGCGAAACAATCGGTGGCAGGAAAGAGGCGGACGGGGAAGAAACCGCGGC
CGGCAGAGAAGAAGTCGAAAGGCGCGGCCACGGCCGTTCCGGCAACGTCA
CGATCAGAAGCAGCAGCACCACCACCAGCAGCAGGCCCGACAGAAGGTGG
TGCGAGAGCTGGCGGGGGCATCGCCGAGTCTGCCCTACCGACGGCAGGCG
GCAGCCACGCCAAGAAGAGGCCCCGCTCCCCTCCTCCCTCCCCTCGACAA
GAAGAAGAGGGAGGACGGCCAGAACAGCACGGAGGAGCCAAACGCCGCGC
TGCTGCCGCCCCCCGTGGCGGGCGACTCGCGGCCGACCTGGCGTTGCCTC
CCGCAAGGCAACAACAACCGCCGGAACCGCGGGGCGGCGTCGTCGTCGAC
GCCAACGCCGCCGCGGCAGCGCGCATGTCGCATGCAGGCAAGCCGACGCC
GTCGGCCGGCTCGAAGAGCGGCGGTCCGGCGACCCCGGCAGGCGAAGAAG
AGGGTCCGACGATGGCGGCTCTCTTCGGAGAAGAAGAAGACAACGAACCG
GAGTCGGCGACAGCAGCAGCGGAAGCCGACGTCGAGGCGCCGGGGGCGGC
GGTGCTAGCGGCGGCGGCGGCAGCGCTGGCGGTGGAGGTGGCGGCGGCGA
CCGCGGCGGCGACGGCGACGGCACCGGCAGCGGGAATCGACGTCGCAGAC
GGGGCGATGCCGTCAGCGGCGGCGGCACCGGCGACGAAGTCGTACCCGCC
GCTGCAAACGGCGCCCGAGAAAATGCCGGCGTGGCGGGAGGGGGAGCGGT
ACGGGGTCGTCTTGGGAGACTCGTTCTACGGCAGCGGCGGTGGTGGTAGT
ACTATAGCCGCAAGCAGTAAGAGCGGTGGTCGTCGTGCCAAAGGAGGCAA
CAGGAGAGGTCTTGTCGGTGATGACGATACGGGTGAGAGCAACCCGGGGC
AGTACGTCCACCTCAAGTACGACTTCGTGCCCGGGCGGACGAACCTGGAC
GTGCCGGCCACGCTGCGGCAGCGGCCACTGACGGAGAACGAAGGGAGGTG
GAAAGGCCGCGGCAGCGGTACCGGCGGCGACGTCGTCGGTGGCGGGCAGC
AGCAGCGGTGGGCGGCGGAAGTGGAGTACGAGAGCCGAGATCCCTCCAAC
CCGGAACCCGTTCGTTTCACCGGGGATGCTGTAAGAATATTGTGCGCTAG
AGGCAGATGGGGGACGTTTTGGGGGGCGCACCCACTCGGGCGGTTAAACG
AAATGCCGGCAGCCGGCGGGTATTGTCGCATCAGAAAGGCAGTATCCTGA

Synonyms

The feature 'Ec-00_003540.1' has the following synonyms


Synonym
Esi0217_0040
Esi_0217_0040