Ec-00_003360.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003360.1
Unique NameEc-00_003360.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length413
Homology
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BLAST of Ec-00_003360.1 vs. uniprot
Match: D7FRP7_ECTSI (General transcription factor IIH subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP7_ECTSI)

HSP 1 Score: 780 bits (2015), Expect = 1.110e-278
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1 
Query:   25 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC 1260
            MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC
Sbjct:    1 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC 412
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A835ZF22_9STRA (General transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF22_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 1.720e-156
Identity = 237/401 (59.10%), Postives = 292/401 (72.82%), Query Frame = 1 
Query:   64 GYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRR-VGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSG-LPRYRCPECRSAFCLDCDMYVHDSLHNCPGCC 1260
            GYAWEK FER+WE V+EDE GN+KT  E   R  R RR  + G++IKRGMIRY++L IDLSK M++ DMRP+RLAVT ++V +FV  +FDQNPLSQLGI++TR+GRAE++T+LSGNPKAH+EAL +  DT+GE SLQNLLE+    L + PEYG+RE VV+Y SL TCDPG+I +TIA LK HKVR SVVGLGAE+++ RR+ E+T GD+ +A DE+HY++SL+AQCTPPPT   + G  FADLV MGFP      F +LGYSG +Q L+  GY CPRCK KT+ELPS C ICALPLVSSPHLARSYHHLFPVP FDE  A+A                            ++A+ S C  CLR  +    R+ CP C+ AFCL+CDMY+HDSLHNCPGCC
Sbjct:   24 GYAWEKSFERSWEDVQEDEQGNLKTDHERDARLSRGRRTALYGQAIKRGMIRYVFLCIDLSKGMSETDMRPNRLAVTTKVVAEFVRGFFDQNPLSQLGIIITRDGRAERVTDLSGNPKAHIEALARSLDTQGEPSLQNLLELTAHCLASAPEYGSREAVVLYGSLHTCDPGNILDTIALLKRHKVRCSVVGLGAEVYIARRIAEDTGGDFVVAVDEHHYKDSLLAQCTPPPTL-AKRGPHFADLVEMGFPRRVDGTF-ALGYSGRQQTLTAQGYYCPRCKIKTTELPSTCEICALPLVSSPHLARSYHHLFPVPPFDEQEASA--------------------------AADTAAQS-CEACLRPFAAKASRFMCPNCKGAFCLECDMYIHDSLHNCPGCC 395
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A7S2Y0G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G9_9STRA)

HSP 1 Score: 356 bits (914), Expect = 5.860e-112
Identity = 197/431 (45.71%), Postives = 258/431 (59.86%), Query Frame = 1 
Query:   46 DDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRR----------------NRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPT----PPGREGA---MFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQF-----------DEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSS--------YCAGCLRDLSGLP-RYRCPECRSAFCL 1209
            D+    GYAWEKGFERTWE VEEDE G ++  E   RR                ++         ++KRGMIR LYLA+DLSK MA+GD RP+R+A     + DF+  YFDQNPLSQLGI++TR+G  ++++ELSG+P+A + AL +   T+G ASLQN LEMA  SL+A PEY +REVVV+Y SLSTCDPGDIH T+ +L+  +VR SVV L AE+F+ R++ E T G + +A D  H RE +MA C PPPT    P G +G    ++ADLV+MGFP +  D+ P+L +SG +Q  S  GY+CPRC +++++LP  C IC LPLVSSPHLARSYHHLFPVP+F           DE  A                             +  +SS         +C GCL  L      + CP+C  A+CL
Sbjct:   23 DEGQEGGYAWEKGFERTWEAVEEDEDGRLQLEELDSRRQLLEXXXXXXLLLEDYSQDPSAAGTAGAVKRGMIRSLYLALDLSKAMAEGDFRPNRMAAAAAALIDFIQEYFDQNPLSQLGIVITRDGICQRVSELSGSPQAQVNALKRALHTRGSASLQNTLEMALASLKATPEYASREVVVVYGSLSTCDPGDIHATLERLQKARVRVSVVHLSAELFICRKVVEGTGGAHGVAKDAGHMRELIMAHCRPPPTRSGGPQGGDGKCGPIYADLVKMGFPRQRSDLRPTLAFSGRQQVFSSEGYTCPRCLSRSTDLPCTCSICGLPLVSSPHLARSYHHLFPVPRFAEKNKEKQAKADEEGAGGKGAEGAGDNKGPGGAVASSNPKSRNDRQVPSSSQPPPVGALQHCTGCLVPLRDEDVTFTCPKCNQAYCL 453
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A6G0W889_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W889_9STRA)

HSP 1 Score: 350 bits (898), Expect = 9.840e-111
Identity = 187/412 (45.39%), Postives = 252/412 (61.17%), Query Frame = 1 
Query:   34 MDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTRE----EGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            MDD ++    GYAWE  FER+W+G+EEDE G +K        G +   R+RR+   + +++G+IRY+++ +DLSK M+  D +P R AV    VQ F+ +YFDQNP+SQLG++  +  +AEK+T+LSGNP  HME L +     GE SLQN LEMA  +L+ VP YG++E++V+Y SL+T DPGDI  T++ L+   +R S VG+GAEM +LRR+ ++T G YS+A D  H RE L A  TP P+      A FA LV MGFP +      +L      Q+ +  GY CPRCK+K+ ELP+ C +C LPLVSSPHLARSYHHLFPV  FD++                                +  S + C  CL  L+    YRCP C+  FC +CDMY+HDSLHNCPGC
Sbjct:    1 MDDEENT--KGYAWEGSFERSWDGIEEDESGALKVHSIAASSGDKA--RLRRQQMLQRVRKGLIRYVFVIVDLSKGMSQKDWKPHRCAVVTEEVQRFIADYFDQNPISQLGLIGIKSAKAEKLTDLSGNPSQHMEVLKRALTVHGEPSLQNALEMARNALKIVPSYGSKEIIVVYGSLTTTDPGDIFATLSSLQRESIRCSFVGMGAEMHLLRRIAKDTHGTYSVALDPPHMRELLSAFTTPCPSL-ASSAARFATLVEMGFPQKRSG---ALSLCVCHQQFTTMGYLCPRCKSKSCELPTVCAVCNLPLVSSPHLARSYHHLFPVVNFDKV--------------------------------DHPSEAKCFACLVRLTH--GYRCPTCQHVFCSECDMYIHDSLHNCPGC 370
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A485LTD2_9STRA (Aste57867_24758 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD2_9STRA)

HSP 1 Score: 350 bits (898), Expect = 1.090e-110
Identity = 188/406 (46.31%), Postives = 251/406 (61.82%), Query Frame = 1 
Query:   46 DDNDGAGYAWEKGFERTWEGVEEDEHGNIKTRE--EGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            DD +  GYAWE  FER+W+G+EEDE G +K +   +      R+RR+   + +++G+IRY+Y+ +DLSK M+  D +P R AV    VQ FV +YFDQNP+SQLG++  +   AEK+++LSGNP  H+E L +     GE SLQN LEMA  +L+ VP YG++E+VV+Y SL+T DPGDI  T++ L+   +R S VG+GAEM +LRR+ +ET G YS+A D++H+RE + A  TP P+      A FA LV MGFP +      +L      Q  +  GY CPRCK+K+ ELP+ C +C LPLVSSPHLARSYHHLFPV  FD+                              T +E  ++  C  CL  L+    Y CP C  AFC DCDMY+HDSLHNCPGC
Sbjct:    3 DDENAKGYAWEGSFERSWDGIEEDESGALKVQAFVQSSGDKARLRRQQMLQRVRKGLIRYVYVVVDLSKGMSQKDWKPHRCAVVTEEVQRFVADYFDQNPISQLGLIGIKSAIAEKLSDLSGNPGHHIEILKRTLTVHGEPSLQNALEMARNALKIVPSYGSKEIVVVYGSLTTTDPGDIFATLSSLQRESIRCSFVGIGAEMHLLRRIAKETHGTYSVALDQSHFRELMAAFTTPCPSL-ASSVAKFATLVEMGFPQKRSG---ALSLCVCHQNFTTMGYLCPRCKSKSCELPTTCAVCNLPLVSSPHLARSYHHLFPVVNFDK-----------------------------KTVKEIKTAK-CFSCLVPLNS-HAYVCPTCNHAFCSDCDMYIHDSLHNCPGC 373
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A067C818_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C818_SAPPC)

HSP 1 Score: 342 bits (876), Expect = 2.020e-107
Identity = 182/408 (44.61%), Postives = 246/408 (60.29%), Query Frame = 1 
Query:   46 DDNDGAGYAWEKGFERTWEGVEEDEHGNIKT----REEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            DD+ G GYAWE  FER+W+G+EEDE G +K        G +   R+RR+   + +++G+IRY+Y+ IDLSK M+  D +P R AV    VQ FV +YFDQNP+SQLG++  +   AEK+++LSGNP  H++ L +     GE SLQN LEMA ++L+ VP YG++E+VV+Y SL+T DPGDI  TI  L+   +R S V +GAEM +LRR+ ++T G YS+A D NH+++ + A   P P+        FA LV MGFP        +L      Q  + +GY CPRCK+K+ ELP+ C +C LPLVSSPHLARSYHHLFP+  +++  A                              +   +  C GCL  L  L  Y CP C   FC DCD+Y+HDSLHNCPGC
Sbjct:    3 DDDQGKGYAWEGSFERSWDGIEEDESGALKLGAFMTSSGDKS--RLRRQEMLQRVRKGLIRYVYVIIDLSKGMSQKDWKPHRCAVVTEEVQRFVADYFDQNPISQLGLIGIKSSVAEKLSDLSGNPGHHIDILKRTITVHGEPSLQNALEMAKSALKTVPSYGSKEIVVVYGSLTTTDPGDIFATITALQKDSIRCSFVSIGAEMHLLRRIAKDTQGTYSVAMDPNHFKDLISAFTIPSPSL-ATAATKFATLVEMGFPQRRSG---ALSLCVCHQVFTTTGYLCPRCKSKSCELPTVCAVCNLPLVSSPHLARSYHHLFPIANYEKRSA------------------------------DELRTRKCFGCLGALQNLG-YECPTCTHVFCNDCDLYIHDSLHNCPGC 373
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BLAST of Ec-00_003360.1 vs. uniprot
Match: D8S216_SELML (General transcription factor IIH subunit n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S216_SELML)

HSP 1 Score: 342 bits (877), Expect = 2.760e-107
Identity = 182/403 (45.16%), Postives = 256/403 (63.52%), Query Frame = 1 
Query:   70 AWEKGF--ERTWEGVEEDEHGNIKTREEGQRRNRRVRRRV--GGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSG-YSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLP--RYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            AWE+ +  +R+WE + EDE G +K  ++ Q++ +  RR +   G  I+RG+IRYL L +D S+   + D RPSR+AV  + V+DFV  YFDQNPLSQLGI+V + G A  +TELSG+P+AH+ AL  + ++ GEASLQN LE+A T ++ +P YG+REVV+++S+LSTCDPG+I ET+ K K  +++ SVVGL AE+++ + +++ET G Y++A +E H +E L+    PP   P    A  A LVRMGFP    +   ++      +EL + G Y CPRC+ +  ELP+EC +C L LVSS HLARSYHHLFP+P FDE+   A                        +   +S+ +  C GC   LSG    R RCP C+  FC DCD+Y+H+SLHNCPGC
Sbjct:   12 AWERAYADDRSWESLIEDESGLLKAGDDVQQQRQHRRRLIQASGPRIQRGIIRYLCLILDFSRAAGEIDFRPSRMAVVAKAVEDFVREYFDQNPLSQLGIIVMKNGIASVVTELSGSPEAHIRALKSNLESFGEASLQNGLELAHTYVQHIPSYGHREVVIVFSALSTCDPGNILETVKKCKAARMKCSVVGLTAEIYICKHISQETGGSYAVAMNEGHLKEILLEHVPPPAAMPD---ASSASLVRMGFPQRGSE--GAVAICACHKELKIGGGYICPRCRARVCELPTECSLCGLALVSSAHLARSYHHLFPIPTFDELLVDA------------------------SLRGKSSFAGSCFGCRIQLSGSGSLRLRCPRCKRDFCFDCDVYIHESLHNCPGC 385
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A2P6N5T3_9EUKA (General transcription factor IIH subunit n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N5T3_9EUKA)

HSP 1 Score: 341 bits (875), Expect = 3.950e-107
Identity = 181/413 (43.83%), Postives = 259/413 (62.71%), Query Frame = 1 
Query:   25 MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDS-DTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDE-IPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            MD+ D+ ++     Y WEKG ++TWE + ED+  +++ +E  +R+ R  ++ +  +++++GM RY+++ +DLSK++ D DM+PSRL V ++ V+ F+ +YFDQNPLSQ+G++V R   AEKITELSGNP  H+  LT  S +  GE SLQN LE+A ++L  VP YG+RE++++  SLSTCDPGDI ET+  LK   ++  ++GL AE++V R +TE TSG Y +A +E H+RE L+    PPP+    E      L++MGFP    D+ PSL      Q+    GY CP+C++K  ELP++C +C L L+SSPHLARSYHHLFPVP F E +P  A                           +E+A    C  C   LS    Y CP+C+  FC +CD Y+HDSLHNCPGC
Sbjct:    1 MDSDDEKEER--RSYNWEKGIDKTWENIGEDDS-DLRAQER-KRKKRSTQKAI--QNVRKGMTRYVFVVLDLSKSILDKDMKPSRLTVAVKTVEAFILDYFDQNPLSQMGVIVARSSLAEKITELSGNPSKHISTLTSTSTNVSGEFSLQNSLEVARSTLCYVPAYGSREIIIVSGSLSTCDPGDIFETVELLKKEGIKVHIIGLSAEVYVCRAVTERTSGSYHVALNEPHFRELLLNLSPPPPSSSKTE----TRLIKMGFPQRRADISPSL--CACHQQPKYGGYYCPQCQSKCCELPTDCQVCGLTLISSPHLARSYHHLFPVPYFIEHVPPVAQKTFG---------------------RDEAA----CLSCRVALSQAAVYTCPQCKGNFCTECDDYIHDSLHNCPGC 376
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A7R9YAF6_9STRA (General transcription factor IIH subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAF6_9STRA)

HSP 1 Score: 342 bits (877), Expect = 5.600e-107
Identity = 180/424 (42.45%), Postives = 258/424 (60.85%), Query Frame = 1 
Query:   25 MDAMDDHDDNDGAG-YAWEKGFERTWE-GVEEDEHGNIKTRE-EGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGD--MRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKD-SDTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDE--IPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSG-----LPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            M+ +D  DD    G +AWE+    TW+ G++EDEHGN++ R+     R R+  +     +++RGMIRY+YL +D S  M DGD  M+PSR+ V    V DF+ N+FD+NP+S LG++V+R+G  +K+T L GNP  H++AL +D ++  G AS+QN LE+A   L+ VP+YG +EV+++Y SL++ DPGDIH TI  LK   +R SV+ L AE++V +R+ E T GD+ +  D +  R    A   PPPTP   +      LVRMGFP   +   PS  ++G+++ L  +GY CP C  KT++LPS C++C+LPLVSS  LARSYHHLFPVP +D+  +P  A                         +   S+    C+GCL DLS      + R RCP C+  +C DCD+++HD LHNCP C
Sbjct:   11 MEPLDGEDDLSLRGRHAWEQVSSHTWQTGLDEDEHGNLQYRQVSALERWRKASKNRDARTVRRGMIRYVYLILDKSLAMLDGDVDMQPSRVVVMQVHVADFIRNFFDENPISNLGVIVSRDGAGDKLTALGGNPTVHLQALEEDGTNCAGMASIQNSLELAMALLKTVPQYGTKEVILVYGSLTSTDPGDIHTTIESLKQEGIRVSVINLVAEIYVCKRIAEATGGDHRVVLDLDSLRAHFAAHVRPPPTPSSAKVVKAPTLVRMGFPRRIETSVPSFAFAGDQERLCEAGYVCPECTVKTTDLPSTCMVCSLPLVSSAQLARSYHHLFPVPLYDQDDLPGKA------------------DAEDLELSPRNSSEKPRCSGCLVDLSARIERDVVRLRCPTCKQLYCGDCDIFIHDELHNCPTC 416
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BLAST of Ec-00_003360.1 vs. uniprot
Match: A0A2B4SDD3_STYPI (General transcription factor IIH subunit n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SDD3_STYPI)

HSP 1 Score: 338 bits (866), Expect = 1.180e-105
Identity = 176/411 (42.82%), Postives = 250/411 (60.83%), Query Frame = 1 
Query:   49 DNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVRRRVGGES--IKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDS--DTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGY----SGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 1257
            D D  GY W   +ERTWE ++ED  G+++T  + +  +R  RRRV G S  I+ GM+R+L++ +D+S+ M + D++PSRLA ++++++ FVT YFDQNP+SQ+GI+VTR  RAEK+TELSGNP+ H+  L K +    +GE SLQN +E A   LR +P + +RE+++++ SL++CDPGD+ ET+  L+   +R S++G+ AE+ V R +  ET G Y +  DE HYRE LM   TPP      E A    L+RMGFP       PSL      S   + L  SGY CP+CK+K  +LP EC +C L LV +PHLARSY HLFP+PQF E   + P                          +     ++C  C R  +    Y CP+C   FC++CD+Y+HDSLH+CPGC
Sbjct:    4 DEDSGGYRWLNQYERTWEVIQEDAEGSLQTVVD-EISHRTKRRRVMGRSGNIRLGMMRHLFIIVDMSRAMEEADLKPSRLACSVKLLESFVTEYFDQNPISQIGIIVTRNKRAEKLTELSGNPQVHIGTLQKAAAKPCQGEPSLQNAMESAVQWLRHMPGHASREILILFGSLTSCDPGDVSETVQTLQRQNIRCSIIGMAAEVRVCRTICAETQGSYGVILDERHYRELLMQHVTPPVAKADAEAA----LIRMGFPQHLSSGPPSLCMCHLDSNGIKGLGTSGYFCPQCKSKYCDLPVECKVCGLTLVCAPHLARSYQHLFPLPQFTETDLSTPVDG-----------------------QSLPRQNHCFACQRVFTEQTVYSCPQCTQFFCMECDIYIHDSLHSCPGC 386
The following BLAST results are available for this feature:
BLAST of Ec-00_003360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRP7_ECTSI1.110e-278100.00General transcription factor IIH subunit n=2 Tax=E... [more]
A0A835ZF22_9STRA1.720e-15659.10General transcription factor IIH subunit n=1 Tax=T... [more]
A0A7S2Y0G9_9STRA5.860e-11245.71Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6G0W889_9STRA9.840e-11145.39Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LTD2_9STRA1.090e-11046.31Aste57867_24758 protein n=1 Tax=Aphanomyces stella... [more]
A0A067C818_SAPPC2.020e-10744.61Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
D8S216_SELML2.760e-10745.16General transcription factor IIH subunit n=4 Tax=S... [more]
A0A2P6N5T3_9EUKA3.950e-10743.83General transcription factor IIH subunit n=1 Tax=P... [more]
A0A7R9YAF6_9STRA5.600e-10742.45General transcription factor IIH subunit n=1 Tax=P... [more]
A0A2B4SDD3_STYPI1.180e-10542.82General transcription factor IIH subunit n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3338233..3344961 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score782.7
Seed ortholog evalue8.3e-224
Seed eggNOG ortholog2880.D7FRP7
Preferred nameGTF2H2
Length2278
KEGG rclassRC00002,RC00078
KEGG koko:K00889,ko:K01177,ko:K03142,ko:K14766
KEGG ReactionR02112,R03469,R11262
KEGG Pathwayko00500,ko00562,ko01100,ko03022,ko03420,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05203,ko05231,map00500,map00562,map01100,map03022,map03420,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05203,map05231
KEGG ModuleM00130,M00290
Hectar predicted targeting categoryother localisation
Gene idEc-00_003360.1
GOsGO:0000109,GO:0000112,GO:0000428,GO:0000438,GO:0000439,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0002029,GO:0002031,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006412,GO:0006464,GO:0006468,GO:0006518,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0006950,GO:0006974,GO:0008135,GO:0008150,GO:0008152,GO:0008277,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010646,GO:0010648,GO:0016043,GO:0016070,GO:0016071,GO:0016192,GO:0016310,GO:0016567,GO:0016591,GO:0016604,GO:0016607,GO:0016740,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019787,GO:0022401,GO:0022607,GO:0023051,GO:0023057,GO:0023058,GO:0030880,GO:0031323,GO:0031326,GO:0031334,GO:0031623,GO:0031974,GO:0031981,GO:0032446,GO:0032774,GO:0032806,GO:0032991,GO:0033554,GO:0033683,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036260,GO:0043043,GO:0043112,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045744,GO:0046483,GO:0047485,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051716,GO:0055029,GO:0060255,GO:0061630,GO:0061659,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070647,GO:0070816,GO:0070911,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097659,GO:0098657,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1990234,GO:1990391,GO:2000112,GO:2001141
EggNOG free text desc.nucleotide-excision repair
EggNOG OGsCOG5151@1,KOG2807@2759
EC2.7.1.68,3.2.1.2
COG Functional cat.KL
CAZyGH14
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03021,ko03400,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003360Ec-00_003360Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 3338233..3345253 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003360.1Ec-00_003360.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 3338258..3343947 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003360.1.1Ec-00_003360.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3338233..3338421 +
Ec-00_003360.1.2Ec-00_003360.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3339413..3339592 +
Ec-00_003360.1.3Ec-00_003360.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3340051..3340135 +
Ec-00_003360.1.4Ec-00_003360.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3340885..3340962 +
Ec-00_003360.1.5Ec-00_003360.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3341559..3341675 +
Ec-00_003360.1.6Ec-00_003360.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3342217..3342390 +
Ec-00_003360.1.7Ec-00_003360.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3343089..3343217 +
Ec-00_003360.1.8Ec-00_003360.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3343636..3344961 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0033605UTR:Ec-00_003360.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 3338233..3338257 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003360.1CDS:Ec-00_003360.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 3338258..3338421 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0033603UTR:Ec-00_003360.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 3343948..3344961 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003360.1 ID=Ec-00_003360.1|Name=Ec-00_003360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=413bp
MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVR
RRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNY
FDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQN
LLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRAS
VVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREG
AMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPS
ECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPAAAAAAASAGSAGG
MGSGAGAGRATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMY
VHDSLHNCPGCC*
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spliced messenger RNA

>Ec-00_003360.1 ID=Ec-00_003360.1|Name=Ec-00_003360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2278bp|location=Sequence derived from alignment at chr_00:3338233..3344961+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TACTGCTGCTGTTGCTGGGGATCCCATGGATGCCATGGACGACCACGATG
ATAATGATGGCGCAGGGTATGCGTGGGAGAAGGGCTTCGAGAGAACGTGG
GAGGGAGTCGAGGAGGACGAGCACGGCAACATCAAGACGCGGGAGGAAGG
ACAGAGACGAAATCGTCGCGTGCGGCGACGAGTGGGGGGGGAGTCCATCA
AGCGGGGGATGATCCGCTACCTCTACCTGGCCATCGACCTGTCGAAGACC
ATGGCGGACGGAGACATGCGGCCGAGCAGGCTGGCGGTGACTCTCCGCAT
CGTGCAGGACTTCGTGACCAACTACTTCGACCAGAACCCTCTCAGCCAGC
TCGGCATTCTCGTCACTCGCGAGGGCCGAGCGGAGAAAATAACGGAGCTT
TCGGGCAACCCCAAGGCGCACATGGAGGCGCTAACGAAGGACTCGGACAC
AAAGGGCGAAGCTTCCCTCCAAAACTTGCTCGAGATGGCGTGTACGTCGC
TTCGAGCTGTGCCGGAGTACGGCAACCGAGAGGTGGTCGTTATATACAGC
AGCTTGAGCACCTGCGACCCAGGGGACATCCACGAGACGATCGCCAAGCT
CAAGACACACAAAGTGCGGGCCTCGGTCGTTGGACTAGGGGCGGAGATGT
TCGTCCTCCGACGGCTGACGGAGGAGACGAGCGGGGACTACAGCATCGCC
GGGGACGAGAACCACTACCGGGAGTCGCTCATGGCGCAATGCACGCCGCC
GCCAACGCCGCCGGGCCGGGAGGGGGCCATGTTCGCGGACCTTGTGAGAA
TGGGATTTCCGGCGGAGACCCAGGACGTGTTTCCGAGCCTCGGCTACAGC
GGGAACAGGCAGGAGCTGTCGGTTTCGGGCTACAGCTGCCCTCGATGCAA
GACCAAGACGTCGGAGCTGCCGTCGGAGTGCGTAATCTGTGCGCTCCCTT
TGGTTTCGTCGCCTCACCTCGCGAGGTCGTACCACCATCTGTTTCCCGTG
CCTCAGTTCGACGAAATTCCCGCCGCCGCCCCAGCGGCAGCAGCAGCAGC
AGCCTCAGCTGGGTCTGCGGGCGGCATGGGGTCGGGGGCCGGGGCCGGGC
GAGCGACGGAAGAAGAATCTGCTTCTTCTTCTTACTGTGCTGGGTGTTTG
CGAGACTTGTCGGGGTTGCCGAGGTACCGGTGCCCCGAATGTAGGAGTGC
GTTCTGTCTGGATTGTGACATGTATGTGCATGACTCGCTGCACAATTGCC
CGGGTTGTTGCTGAGCACACTTTGGGTCGATTGGTACCTGGCATGCCAAG
CTTCGAAATTGCGTCGCAAGGGTACCAAGCAGATAGATGCTGCTGGCGCG
AGTGCCATGTGGAGTAGGTTTAGGCCCATGGACCCTTGTCGGAATGTATG
CGAAAACACCGATGCCCACGCTATACTCGATGCTATCGACACGGCTCTAC
GGTTGCCACGGCCAGCTAGCCCCCCCCGCCCCCGCCCCCGGACCTGTTTG
CTGCCACGAGTGATCGTGTGTTGAGTTGTCGGTGGTGTGGTCAGGGTGTT
GATTTGTGGGGCAGAATTTTGGTGATGGTGTTGGTGGATTTTTGGCTCAG
GCGGGCGTGCGGCGGGGGGTGGGGGGTGCGCTATTGTGTTTCTTTGATGG
GCTATTGTGTTTCTTTCTCTGCAAGAGGTACGCTGGTGCAAGCAGCCAAC
ACTCCCGTCTCGAACCTGTTTTCAGACCCCCCCGGGGGGTGTTTGTTGTG
TCGCCCCGACCTTGGTTGGCTGTCATGCGCGAAAAAATGGGGGGGACGGA
TTTTGCTGAACCGGTAGGATCCAGAGCACTTGTGCAGAAGAAATGGACAG
GAACGGAAGCAGGTTAATTTTTATTTCCGCTCTAACAACCGTCCCGGTTT
TGCTGACTGAGCCTGTTTGATACCATCCCGGTTTCTGCTGAACACTGATC
CTTGCTTGGTGTCCCTTACAGTACATAGATCCTTACGACCAAGAACGATT
TCGCAATCGCACAACAACGAAAGGGGTCGGGCACAGCCTGTTTTTTTTTT
CCGAGGCGGGACAGATCTGGCGAGACAAGCATATCCTGTTGTGGCGTTCG
GAGATCCCGGAGTTCTGCTCTTCCTTGACCGCTCGAATCCCCTTCGCGTT
TTCGTTGGTTGTCTCCGGTTGAAAGGTGTTGTTGGTTGGGTTGCCTGTGC
AACATGTTGTGTTCCAAGAGGGCTCGCGGAGCCGAATCCTGGAAGCACTG
CCCCAAACTGGATTAAGAACCAGTTGGG
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protein sequence of Ec-00_003360.1

>Ec-00_003360.1 ID=Ec-00_003360.1|Name=Ec-00_003360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=413bp
MDAMDDHDDNDGAGYAWEKGFERTWEGVEEDEHGNIKTREEGQRRNRRVR
RRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNY
FDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDSDTKGEASLQN
LLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRAS
VVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREG
AMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPS
ECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPAAAAAAASAGSAGG
MGSGAGAGRATEEESASSSYCAGCLRDLSGLPRYRCPECRSAFCLDCDMY
VHDSLHNCPGCC*
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mRNA from alignment at chr_00:3338233..3344961+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003360.1 ID=Ec-00_003360.1|Name=Ec-00_003360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6729bp|location=Sequence derived from alignment at chr_00:3338233..3344961+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TACTGCTGCTGTTGCTGGGGATCCCATGGATGCCATGGACGACCACGATG
ATAATGATGGCGCAGGGTATGCGTGGGAGAAGGGCTTCGAGAGAACGTGG
GAGGGAGTCGAGGAGGACGAGCACGGCAACATCAAGACGCGGGAGGAAGG
ACAGAGACGAAATCGTCGCGTGCGGCGACGAGTGGGGGGGTGAGGCAAGG
CCTTCGATGTGGTTGGGATACTTCTGATTAGGTTGATCGCGCCGTGCAGA
GATAGAAGTTATCAGGTTCTGAGTGCCGAAGTGCTTAGAACAACGTGCTT
GTTTTCACTGATTGCATGTCGACTCGAAACAGCAGTCGGTAGGCATGATC
TGCCGATCAATGCAAAAGTATGAACACCGCCACCGTCCACATCATTGGCT
CCATCCGCCGTTCATATAAACGAGTTAACATGCAACACCCGTTAAACTCC
ACCGCGGGCATCGTGGACTCTTGATGGCGTAGAGTAGATGAATGAAGCTA
TTCGTTGTGCATTTGGCACTGTCGAATTGTGTGCGAAGATTAGCGGCGCA
ACTCGCGTGAATTCGTTGGTTTTCGCGCGGGGACAGCGGTAACGCGGCTG
TCTTAACGCGGCTGTCTTGGAATGAATCCATTGCTTACCCTGGACTCTCA
TCTGTGGATGGAGCTAGATTCGCTGTGTGGCGCTGTAAGAAATAAAACAC
TAAAACTAAATGCAATCTTCATGATCATTGAAAGTCTACCCGTTCGAGCC
AGTACCACAGGAGGGGTGCGTTGAATGTCGTCAACTATGCAGTGCGCCGG
GAAGAAAGACTGCTATTAGATGCTGAGCTAATGTGAGTCTGTTGAAGCCC
ACAAGCTGGCTGTTTGTTTCAAATGGTTTGCTCCACACTCGAGAACTGGT
TCTGCTCGACGTGGGTTGCACGCTACTCGTGGGCATAAATAATCGCAAAG
CCTCTTTCCGCTAGATGGCCACATACATTTCGTCGAAGGCGGTCAGAATC
TTCTGGACTGCTGCGCCCTTTCAACAGAACCACGTCTGCGGATTTCAAGT
CACTCAAACGTCGCGTGTATGCACGCAACAGCAGCAGCAGCACTGCTGTT
GTCGCTGAAATTGCATCAACGGCCACCGTTGACGAGATTGGCCCCCCCTG
GGTGATTTTTGAAAACGCCGCCGACCCCAGGGAGTCCATCAAGCGGGGGA
TGATCCGCTACCTCTACCTGGCCATCGACCTGTCGAAGACCATGGCGGAC
GGAGACATGCGGCCGAGCAGGCTGGCGGTGACTCTCCGCATCGTGCAGGA
CTTCGTGACCAACTACTTCGACCAGAACCCTCTCAGCCAGCTCGGCATTC
TCGTCACTCGGTACGCGGAGCTGCATGCTTGTACGACAAATACTTTCTGG
GTTGGCGAACCGCCGCTTGGTGTGGTGGTTGTTTTTGTTGTTTTCTCCAC
AAAACAAAGCGGTATTGGCATGCTCTTTTCCCTGCTTGTTTGATCGTCGA
TGAATCCTGTCGACAGGTTTCTCTCGCGCTCGATCTTTTCTTTTATTTTC
TGCAGAAGGTTCCTAAGCGCTTTCTGTCACCAGCCAATCCTCTTGAGAAG
CTTGGCCCTACTTGCTCTTGTTGCCGTAGTGGCTGTCACCCGCCAATCCT
CTTGAGAATCTTAGAGCTACTTGCTCTTATTACCGTAAAGGTTGACGAAA
CGAACCATGCCGACAAGTTGTATTGCCTCCCCTCTGCATCCTTTTCTGCC
GCAAACCCTCTCGGCTCTCGCTCGCGGGCACTCGCGTCCCACATGCTTTT
GGGATGCCGCTCACACAGCGAGGGCCGAGCGGAGAAAATAACGGAGCTTT
CGGGCAACCCCAAGGCGCACATGGAGGCGCTAACGAAGGACTCGGACACA
AAGGTGGGGTGTTGAGATCATGGGAAGGGACGGTCGGTACGGTACGGTAG
GGTGGGATGCACGGGTTGATGCGTCCGATACCGAACGGTGTGGCACGAAC
GGTTGCATGCATGAACGTTTTTTCTTTGCTATGAGTACATAGCGCGAGCC
ATTCTCTTTTTTGGTTTGTTTGGAGCGGCCCAAAGTGCGAGCATAGATCT
GTCCCATTCGTAGATGGTTGTTTCTTGTAAATTGTACATGCGGGTATATG
TCGTGTTTGGTGTTTCAAACTCTTGAGGGAGCACCTTCGCCGAGATATCG
AATCTGCGTCTCTTACAGTCCTCACCATGGACTCTCCCGCACCGCTTGCC
AATGGCATCAACCTCTCCCTACCGGTTGCGGGTGGTCGTCCCCCTTCACT
CGTGTTGCGTTTTGTAATGTCGTGGCATTAGACGGAGCAAAAGATCCCGT
CCGATCAGTATCGCTCATGATGCCTTCGTTCAAGGACGAAGCCTAAACCA
TTTCCCCCTTTCCCAGATTTCCAAGCTGCTCGGCCCACTGGGGGGTCGTG
TTGCCACTCACAGCGAGGAACGTGCGTGTGGTTGGGGATCATCCCGCACC
TAGACCTCGGTAGACCTTCCTCCATCCTTGCTCCTTACCGACCACCTTCG
TCGCAGCGTCGTTTGCGCCTCCCTGGCGGCGGAATCATTTTCCAATGCTT
GTCATCTCTTCCCCTTCCCGGTGTGGCTGCTTTCTGCGTCGTGCGCGTTC
AGGGCGAAGCTTCCCTCCAAAACTTGCTCGAGATGGCGTGTACGTCGCTT
CGAGCTGTGCCGGAGTACGGCAACCGAGAGGTAACACAACAACGATCTAG
TCCGCTAAGTATCTCTACGTACATCCAACACAGACCCGTTGACGCCAAGC
GTTCCAAACAGAGGAGTCGAGAGAGCACGACGGCCGAGTTTTTTGGTTTG
GGGAAACCCCCCCGTGTTGACGCGACCAAGAAAAACGCGCGTTCGGGAGT
TCCAAAGGGGTCTTGGGGCGATCTGCTGTGACCGAAAATTGCGATTCGCG
TGATTGAATTCAAGAGTGCACCCCATCTTCTGGTCAGACACCCTTGGCTT
TGCCCCCCTCGGTTGCAGCAACGGCGCAATGGCAATCACGCTGCCTGGCT
CTCGCCGGGGTAGGGTTTCAGCCACACTTCGTGGGGTGTTGGTGGTTGGT
ATGGTGCTCAGCAAGGCGCCGACCGTGGTATTACGCAGCCGCTCGAACGT
TGCCGGACTTCTTTCACCATTTCCGTTTTTTTTTTCGTTTCTGCAGCCGT
GGGCCCCGGGTGCCTCCCCGCCACCGTTTCCTGCCCCTCAAATCAAGCAT
ACCGTGCCCTCTCCCACTTCTTGTGTGCGTGCACTACTACCGTACGAATT
ATATGTCGCGCGATGGGCCGAAAAAGGTGGTCGTTATATACAGCAGCTTG
AGCACCTGCGACCCAGGGGACATCCACGAGACGATCGCCAAGCTCAAGAC
ACACAAAGTGCGGGCCTCGGTCGTTGGACTAGGGGCGGAGATGGTGAGGG
AGGGAGTGACCTCTGGGGTGGGGGGGGTGGGGGGGGTGTACTCATAGTCG
TGCATGCTGTAGTCGTTAGACGATCGCCTTCGCACCTCTGGGGTGTGGGA
GTTGAAAATGGAGGGGTTGAAGGTTAGAGAGAGAGATAAGAAGAAAGAGA
GAGGGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAACTGACCGTTTGTTTGTGTCGATGGAGAACAGCCAA
TCAGCCGCGTCTTTGTTGCGCGTTTGGAACATCTTTGGGTAAGGTATCGC
AGTCCTTTTGTCGGGGTTTACCGCCTTCTTTGACTCGTCAGCCTGTTCGG
TCTGTCTGTTCGGCGGTTTGCATCAATTTTCCCAGCGGTCGACGACTCTT
TGGTGCTATTGGTGCTGTTGGTGGTTGTTGTGTTGTTGTTGCCGTTCGGT
CTCTGTCTGTGTGGTGGTCTGCATCAATTTTTACCCCATGGTCGGCGACT
TTTGTTGTTGTTGTCGTCATCGTTTTGTTTACAGTTCGTCCTCCGACGGC
TGACGGAGGAGACGAGCGGGGACTACAGCATCGCCGGGGACGAGAACCAC
TACCGGGAGTCGCTCATGGCGCAATGCACGCCGCCGCCAACGCCGCCGGG
CCGGGAGGGGGCCATGTTCGCGGACCTTGTGAGAATGGGATTTCCGGCGG
AGACCCAGGTAGGTGGGGCGTAGATAACGTACACGTCCAAAGCTATTTTG
TCGTACGAAAATCGCGAAGAGAAAGTGCACGTCTACGTTTTTATTAATAG
TACCTTGAGGGCAGGTCGAACAATGGTCGACGCTGTATGCGGGCATTAAG
AGTGCGCTCCAGACCTGTCGCAAGTGAGTCCGCATACGCGTTCGTGCCGG
GTATTTTGTTGCCGACAATCCTCGAGGTATACTGGTGGTTGATTGATTCT
GTGCTGTGGACGAGAAGGGGGGAGGGATGGGGAGGTGATGTTGGCGACAC
CTTAAACCTTTTTCGTCCGGGTCCCGTGTCATGGACGGAAGACCCCGTAA
AGTGAGTGTGGATCTGCTGCTGCAAGCCCATCGGGAAGCTGGTGGATTCC
CCTGGCCCACCCTCTAATCTCTTCCTGCATGACATCGGAAAGAGCACCGA
GAACATGAGCCGTACTGCTGCTGCTGCTGCTGCTGCTGCTGGTATCGCTG
CTGGTGTTGTTCTGGGACTTTTTTCGTCCAGCGGTACATGAGATTTTTTT
TTTTCGGGATGTTGGTGGGGGAAAGGGTGCGAAATCGCACGCGCCGATTC
ACCAGCAACTGAACGACAAACTAAACCAAGCGGGACACCGAAGCATTCAA
GCTTTCCGCAGACGTGCGTTTTTCTGACTTTGATTTTTTTCTTGTGGACC
ATACAGGACGTGTTTCCGAGCCTCGGCTACAGCGGGAACAGGCAGGAGCT
GTCGGTTTCGGGCTACAGCTGCCCTCGATGCAAGACCAAGACGTCGGAGC
TGCCGTCGGAGTGCGTAATCTGTGCGCTCCCTTTGGTGAGATGTCAGGCA
GGGCCATAGCAGCTACGGTCGTAGTATGTGCACACGGTAGAGAATGCCGA
GAGACAGATAAGAGGGAAGACGGCTTGCTGCATGAAGAGCAGGCGGAAAG
ACCGCAAGCCTGTATTGTGGTGCGACACTGAGAACAGCAGCCCTACACGT
ATGGCATGAGAGGCGAGTGGATGGTCTAAAGGACCTACGTGGGCAAAAGC
ATCGTCTGAGCACGCCCTCTCCCTGTGACATGAAGCACACGCGCCATCCC
CACACGTTCTCTGTGTGGGTAGAAGTAACCCTCTCCCGTCTTCCACGAGA
CGAATGATCGATGCTCCAGTGCCTAAGGCATGCAATCCTTGACTGAGTCC
CCCGCCTGCCTCTTTTCATCCCTTGCCATTATTGATCTCGTCCTCCTGTT
TAGGTTTCGTCGCCTCACCTCGCGAGGTCGTACCACCATCTGTTTCCCGT
GCCTCAGTTCGACGAAATTCCCGCCGCCGCCCCAGCGGCAGCAGCAGCAG
CAGCCTCAGCTGGGTCTGCGGGCGGCATGGGGTCGGGGGCCGGGGCCGGG
CGAGCGACGGAAGAAGAATCTGCTTCTTCTTCTTACTGTGCTGGGTGTTT
GCGAGACTTGTCGGGGTTGCCGAGGTACCGGTGCCCCGAATGTAGGAGTG
CGTTCTGTCTGGATTGTGACATGTATGTGCATGACTCGCTGCACAATTGC
CCGGGTTGTTGCTGAGCACACTTTGGGTCGATTGGTACCTGGCATGCCAA
GCTTCGAAATTGCGTCGCAAGGGTACCAAGCAGATAGATGCTGCTGGCGC
GAGTGCCATGTGGAGTAGGTTTAGGCCCATGGACCCTTGTCGGAATGTAT
GCGAAAACACCGATGCCCACGCTATACTCGATGCTATCGACACGGCTCTA
CGGTTGCCACGGCCAGCTAGCCCCCCCCGCCCCCGCCCCCGGACCTGTTT
GCTGCCACGAGTGATCGTGTGTTGAGTTGTCGGTGGTGTGGTCAGGGTGT
TGATTTGTGGGGCAGAATTTTGGTGATGGTGTTGGTGGATTTTTGGCTCA
GGCGGGCGTGCGGCGGGGGGTGGGGGGTGCGCTATTGTGTTTCTTTGATG
GGCTATTGTGTTTCTTTCTCTGCAAGAGGTACGCTGGTGCAAGCAGCCAA
CACTCCCGTCTCGAACCTGTTTTCAGACCCCCCCGGGGGGTGTTTGTTGT
GTCGCCCCGACCTTGGTTGGCTGTCATGCGCGAAAAAATGGGGGGGACGG
ATTTTGCTGAACCGGTAGGATCCAGAGCACTTGTGCAGAAGAAATGGACA
GGAACGGAAGCAGGTTAATTTTTATTTCCGCTCTAACAACCGTCCCGGTT
TTGCTGACTGAGCCTGTTTGATACCATCCCGGTTTCTGCTGAACACTGAT
CCTTGCTTGGTGTCCCTTACAGTACATAGATCCTTACGACCAAGAACGAT
TTCGCAATCGCACAACAACGAAAGGGGTCGGGCACAGCCTGTTTTTTTTT
TCCGAGGCGGGACAGATCTGGCGAGACAAGCATATCCTGTTGTGGCGTTC
GGAGATCCCGGAGTTCTGCTCTTCCTTGACCGCTCGAATCCCCTTCGCGT
TTTCGTTGGTTGTCTCCGGTTGAAAGGTGTTGTTGGTTGGGTTGCCTGTG
CAACATGTTGTGTTCCAAGAGGGCTCGCGGAGCCGAATCCTGGAAGCACT
GCCCCAAACTGGATTAAGAACCAGTTGGG
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Coding sequence (CDS) from alignment at chr_00:3338233..3344961+

>Ec-00_003360.1 ID=Ec-00_003360.1|Name=Ec-00_003360.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1239bp|location=Sequence derived from alignment at chr_00:3338233..3344961+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATGCCATGGACGACCACGATGATAATGATGGCGCAGGGTATGCGTG
GGAGAAGGGCTTCGAGAGAACGTGGGAGGGAGTCGAGGAGGACGAGCACG
GCAACATCAAGACGCGGGAGGAAGGACAGAGACGAAATCGTCGCGTGCGG
CGACGAGTGGGGGGGGAGTCCATCAAGCGGGGGATGATCCGCTACCTCTA
CCTGGCCATCGACCTGTCGAAGACCATGGCGGACGGAGACATGCGGCCGA
GCAGGCTGGCGGTGACTCTCCGCATCGTGCAGGACTTCGTGACCAACTAC
TTCGACCAGAACCCTCTCAGCCAGCTCGGCATTCTCGTCACTCGCGAGGG
CCGAGCGGAGAAAATAACGGAGCTTTCGGGCAACCCCAAGGCGCACATGG
AGGCGCTAACGAAGGACTCGGACACAAAGGGCGAAGCTTCCCTCCAAAAC
TTGCTCGAGATGGCGTGTACGTCGCTTCGAGCTGTGCCGGAGTACGGCAA
CCGAGAGGTGGTCGTTATATACAGCAGCTTGAGCACCTGCGACCCAGGGG
ACATCCACGAGACGATCGCCAAGCTCAAGACACACAAAGTGCGGGCCTCG
GTCGTTGGACTAGGGGCGGAGATGTTCGTCCTCCGACGGCTGACGGAGGA
GACGAGCGGGGACTACAGCATCGCCGGGGACGAGAACCACTACCGGGAGT
CGCTCATGGCGCAATGCACGCCGCCGCCAACGCCGCCGGGCCGGGAGGGG
GCCATGTTCGCGGACCTTGTGAGAATGGGATTTCCGGCGGAGACCCAGGA
CGTGTTTCCGAGCCTCGGCTACAGCGGGAACAGGCAGGAGCTGTCGGTTT
CGGGCTACAGCTGCCCTCGATGCAAGACCAAGACGTCGGAGCTGCCGTCG
GAGTGCGTAATCTGTGCGCTCCCTTTGGTTTCGTCGCCTCACCTCGCGAG
GTCGTACCACCATCTGTTTCCCGTGCCTCAGTTCGACGAAATTCCCGCCG
CCGCCCCAGCGGCAGCAGCAGCAGCAGCCTCAGCTGGGTCTGCGGGCGGC
ATGGGGTCGGGGGCCGGGGCCGGGCGAGCGACGGAAGAAGAATCTGCTTC
TTCTTCTTACTGTGCTGGGTGTTTGCGAGACTTGTCGGGGTTGCCGAGGT
ACCGGTGCCCCGAATGTAGGAGTGCGTTCTGTCTGGATTGTGACATGTAT
GTGCATGACTCGCTGCACAATTGCCCGGGTTGTTGCTGA
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Synonyms
The feature 'Ec-00_003360.1' has the following synonyms
Synonym
Esi0217_0013
Esi_0217_0013