Ec-00_003270.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003270.1
Unique NameEc-00_003270.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length643
Homology
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A6H5JQJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ8_9PHAE)

HSP 1 Score: 947 bits (2449), Expect = 0.000e+0
Identity = 532/642 (82.87%), Postives = 545/642 (84.89%), Query Frame = 3 
Query:  393 MTSDDASEEVVSVEVLSVGMVLLAVXXXXXXXXXXXXXXXXXSPIRKASRAPGSLSSRRTSSTGTTSTITHGCSTAAALEERAEELEAAGDLDGTMEALLASHDQGSSRAVTLAHELSQRHPAGLFGANRCPLSVRSPRRKVGAGVEAGTSADPEASSAAVXXXXXXXXXXXXXXXXXXXXXXXSLTSEVLADGNNGGATGEQENHCVRSPPSGEERSHLPLSGESASSATAAGPGSQAXXXXXTGAREPGKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALPDRGSTPSRDAPGTAAAFGAGLSPSFSSLTDTGGRSETALDGGDAEATKLVRRNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVGWIDLGSYQGQR 2318
            MTSDDASEEVVSVEVL VGMV+LAV                 S IRKASRAPGS SSRRT STGT ST THGCSTAAALE+RAEELEAAGDLDG MEALLASHDQGSSRAVTLAHELSQRHP G  G NRCPLS+RSPRRKVG GVEAG S DPEASSA  XXXXXXXXX              SL SEVLAD NN G T   E HC RS PSGEER H+ LSGESAS ATAAGP SQ+     TGA EPGKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSAL D GS+ SRDA GTAAAFGAGLSPS SS  +TG +S+ ALD GDAEATKL RRNFTVRQLNAFDGGCSAPRMRGGEARA KQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGAS SDRSS+TLLDDLSLE LGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGR A VA  E+ ETER AGAG  EREVGGGEPGEQ A L R EEQPAESLPPEQEAKATANAV FSNYAA+PIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWV KLGEGGKGYPVVGWIDLGSY+  R
Sbjct:    1 MTSDDASEEVVSVEVLWVGMVILAVLLMLPARWGAG------SSIRKASRAPGSSSSRRTGSTGT-STSTHGCSTAAALEKRAEELEAAGDLDGAMEALLASHDQGSSRAVTLAHELSQRHPVGALGGNRCPLSIRSPRRKVGGGVEAGASPDPEASSAXXXXXXXXXXXAVSVVAPVCAAALTSLASEVLADDNNDGVTSVPEEHCKRSLPSGEERRHVTLSGESAS-ATAAGPASQSAATTATGALEPGKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALADTGSSASRDAAGTAAAFGAGLSPSSSSFAETGVQSDDALDVGDAEATKLARRNFTVRQLNAFDGGCSAPRMRGGEARAGKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASHSDRSSNTLLDDLSLENLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRSAHVAGPEYEETERRAGAGREEREVGGGEPGEQVAALGRHEEQPAESLPPEQEAKATANAVCFSNYAARPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVAKLGEGGKGYPVVGWIDLGSYRSGR 634
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: D7FRN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN9_ECTSI)

HSP 1 Score: 606 bits (1563), Expect = 2.720e-202
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 3 
Query: 1329 SFSSLTDTGGRSETALDGGDAEATKLVRRNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGY 2273
            S SS  DTGGRSETALDGGDAEATKLVRRNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGY
Sbjct:    6 SVSSAEDTGGRSETALDGGDAEATKLVRRNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGY 320
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A7S1ZS28_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZS28_TRICV)

HSP 1 Score: 146 bits (368), Expect = 1.060e-35
Identity = 106/295 (35.93%), Postives = 142/295 (48.14%), Query Frame = 3 
Query: 1416 NFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRAR-GYPSLGRVVA----PPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVG 2285
            NFT  QL  FDGG  +   + GE      +P+Y+++KG VYDAS GRHLYGPGG +  +AG +    +A G+   D+S    LD++S + L   EQ  L GW +  ++   YP LGR++     P   R+ S+ EL  +DG+  D+                                             PE              YAA PIY+  K KV+D+SFGG  FY +GG Y C AG+DASR LAKMS+   D E     S L+++E K L DWV+   E  K YP VG
Sbjct:   18 NFTSVQLLHFDGGEDSVGKKKGE------KPVYLSVKGVVYDASKGRHLYGPGGPFEVYAGRECGAALARGSL--DQSD---LDNISCDDLSMNEQTELEGWVERLKSSLCYPVLGRLIPGDALPSEDRVVSKEELAQYDGKIQDI---------------------------------------------PE-------------GYAAAPIYLAAKGKVYDMSFGGVSFYGKGGAYNCFAGKDASRALAKMSLDPADTENT-STSDLSEKEIKVLNDWVKTFEERKK-YPCVG 241
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK)

HSP 1 Score: 134 bits (337), Expect = 3.910e-31
Identity = 98/295 (33.22%), Postives = 131/295 (44.41%), Query Frame = 3 
Query: 1413 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRA-RGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVGWID 2294
            RNFT  QL  +DG             + +  PIY+AL+G V+D S+    YG  G Y+ FAGHD +R +A  +   D      L+  S EG    E  +L GW  TF+  + YP +GRVV PP PR  SR EL+   G+                                             ++ P                YA  PI + VK  V+DVSFGG  FY+EG  Y   AG+DASR LAKMS   ED+    +   L+++E K L DW E   +  K YP++G+ D
Sbjct:   65 RNFTFEQLKKYDG-------------SEEDEPIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAKMSFEEDD-----LNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPPKPRKISREELQEMRGK---------------------------------------------QTCP--------------EGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNST-ELKDLSEKELKVLDDW-ENTFKNRKKYPIIGFYD 280
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A7S4NEZ3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ3_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.400e-30
Identity = 101/296 (34.12%), Postives = 130/296 (43.92%), Query Frame = 3 
Query: 1413 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRA-RGYPSLGRVVA----PPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVG 2285
            RNFT  QL  FDG          + +  + +P+Y+A+KG V+D S+GR  YGPGG Y  F+GH+    +A  +          +DD S E L   E+  L GW + F+  R YP  GR+V     PP  +  S  EL   DG                                             +  +P                YAA PIY+    KVFDVSFGG  FY + G Y   AG DASR LAKMS    DIE     + LT++E+K L DW++  GE  K YPVVG
Sbjct:   56 RNFTAMQLKHFDGT--------KDEKTGEDKPVYLAVKGIVFDVSSGRDFYGPGGAYEMFSGHECGVALAKMSF-----DEKYIDDFSWESLNFGEKTELDGWIEKFQYYRSYPVKGRLVPEKSIPPSDKTVSTEELAKNDG---------------------------------------------SMEIP--------------EGYAAAPIYVAAGGKVFDVSFGGVTFYGKDGAYSSFAGVDASRALAKMSFDPSDIENPT-INDLTEKEKKCLDDWIKTFGER-KQYPVVG 277
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A7S3USF5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF5_HETAK)

HSP 1 Score: 130 bits (326), Expect = 6.080e-29
Identity = 93/264 (35.23%), Postives = 124/264 (46.97%), Query Frame = 3 
Query: 1506 PIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRA-RGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVGWID 2294
            PI IA+ G+V+D S  R  +GPGG+YS  AG DIS  +A    +       L  D +   L + E+  LR W   +   + +P  GR+VAPPP R F++AEL ++ GR                                          QPA +                  YA  PI +GV  +V+DVSFGG +FY EG PY   AGRDASR LA++S A+ D+ G  +   L ++E   LADW E+     K YPVVGW D
Sbjct:  156 PILIAINGDVFDVSRSRRFFGPGGQYSMLAGRDISVCLA----KLRLEEGLLGADPATAALTKKERRDLRSWHKVYGGYKEFPLAGRLVAPPPARAFAKAELMSYTGR------------------------------------------QPAPA-----------------GYARAPILVGVAGRVYDVSFGGWQFYGEGAPYHLFAGRDASRALARLSFAAADL-GSPELGDLGEKERGVLADW-ERTFARKKRYPVVGWYD 354
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A7S1XXM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXM8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.490e-28
Identity = 92/263 (34.98%), Postives = 122/263 (46.39%), Query Frame = 3 
Query: 1509 IYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFR-ARGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGG-SEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVGWI 2291
            I+IA+KGEV+D SA   LYGPGG Y    G + SR +A  A       ST +DDL+    G  EQ  L GW + F+    YP  GRVV PP  +LF+ A+LRA+ G                                              +++P                YAA P+Y+ V+ +++DVSFG  +E YL GGPY  LAGRD +R L KMS+  ED+    D S  TD + + L DW  K  +    YP VG +
Sbjct:   76 IFIAIKGEVFDVSAKAELYGPGGNYEALTGREASRALAKFALEGPDLESTKIDDLNY---GEREQ--LDGWYEKFKHVNEYPVRGRVVTPPGEKLFTEAQLRAYTGT---------------------------------------------QAVP--------------EGYAAAPLYIAVRRRIYDVSFGNLTEMYLPGGPYAKLAGRDGNRALGKMSLKEEDMFS-RDISDFTDDQNQILDDWAAKFAQR---YPCVGTL 270
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A7S0CLZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLZ8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.890e-28
Identity = 100/299 (33.44%), Postives = 131/299 (43.81%), Query Frame = 3 
Query: 1413 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLS-LEGLGRFEQMTLRGWEDTFRA-RGYPSLGRVVA----PPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGYPVVGWI 2291
            RN+T  QL  F+G       + G     +Q  +Y++L G V+D + G++ YGPGG Y  FAGH+     A  +  +D      LDD+   E L   E+  L GW + F   R YP  G ++      P  R+ S+ E+   DG                                                           N      YA  PIY+GV ++VFDVSFGG EFY +GG YE  AG+DASR LAKMS    D     D S L+++E K L DWV+   E  KGYPVVG I
Sbjct:   63 RNYTEAQLLKFNGSID----KTGRFEVTQQ--VYLSLNGTVFDVTEGKNFYGPGGPYELFAGHECGVAFAKMSFDNDH-----LDDMDGCEKLTNSEKHELIGWMEKFTYYRAYPVKGSLIPNNKLSPSDRILSKEEIAKHDG-----------------------------------------------------------NGTVPEGYAVAPIYIGVGERVFDVSFGGVEFYGKGGAYERFAGKDASRALAKMSFDPADTANT-DTSDLSEKELKVLNDWVKTFDER-KGYPVVGKI 289
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A6H5JR28_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR28_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.230e-27
Identity = 65/119 (54.62%), Postives = 79/119 (66.39%), Query Frame = 3 
Query: 1413 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVV 1769
            R+FT+ +LN FDGG  +P  R       K  PI+I+L G VYDAS GR +YGP GE + FAGHD+SR VA G   S     + LDDLSL GL R E+MTL GWE+ F+A GYP +GRVV
Sbjct:  178 RDFTIAELNTFDGG-ESPLSR-------KPHPIFISLGGTVYDASNGRGIYGPSGELAAFAGHDVSRWVARGLVASKDDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 288
[Close]
BLAST of Ec-00_003270.1 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.860e-25
Identity = 100/295 (33.90%), Postives = 126/295 (42.71%), Query Frame = 3 
Query: 1413 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVA-HGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRA-RGYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGEREVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEG--VLDYSCLTDREEKNLADWVEKLGEGGKGYPVVG 2285
            RNFT+ QL AF G       +G +   V   PIY+AL+GEV+D S  RH YG  G Y  FAGHD S  +A H    SD      L+ ++ E L   E+ TL GW   FR  +GYP +GRVV  P P                                                         P      EQ A  T         AA P+ + V  KVFDVS+GG+  Y +G PY    GRDASR LAKMS  +E+++   + D S     E   + DW  +  +  KGY VVG
Sbjct:   61 RNFTLEQLKAFTG----VNAKGEDDEDV---PIYVALRGEVFDVSQARHAYGKEGNYHIFAGHDASVSLARHSLDASD------LNKMTWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLP--------------------------------------------------------DPLPVYTKEQLAAGTGEGPIPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNPSIADLSLA---EVGVMNDWAARFEK--KGYRVVG 281
The following BLAST results are available for this feature:
BLAST of Ec-00_003270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQJ8_9PHAE0.000e+082.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRN9_ECTSI2.720e-20299.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1ZS28_TRICV1.060e-3535.93Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3Y4U5_HETAK3.910e-3133.22Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4NEZ3_9STRA4.400e-3034.12Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3USF5_HETAK6.080e-2935.23Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1XXM8_9STRA2.490e-2834.98Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0CLZ8_9STRA2.890e-2833.44Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6H5JR28_9PHAE3.230e-2754.62Cytochrome b5 heme-binding domain-containing prote... [more]
A0A836C9I0_9STRA3.860e-2533.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3279961..3286392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score613.2
Seed ortholog evalue1.4e-172
Seed eggNOG ortholog2880.D7FRN9
Length3173
KEGG koko:K17278
Hectar predicted targeting categorysignal anchor
Gene idEc-00_003270.1
GOsGO:0003674,GO:0005488,GO:0005496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008047,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008289,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0019216,GO:0019218,GO:0019222,GO:0020037,GO:0030234,GO:0031323,GO:0031326,GO:0031984,GO:0032443,GO:0042175,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0046890,GO:0046906,GO:0048037,GO:0050789,GO:0050790,GO:0050794,GO:0050810,GO:0062012,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0097159,GO:0097384,GO:0098772,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
EggNOG free text desc.steroid binding
EggNOG OGsKOG1110@1,KOG1110@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003270Ec-00_003270Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 3279961..3286392 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003270.1Ec-00_003270.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 3280812..3285999 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003270.1.3Ec-00_003270.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3279961..3280987 -
Ec-00_003270.1.2Ec-00_003270.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3281266..3281839 -
Ec-00_003270.1.1Ec-00_003270.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3284821..3286392 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0032703UTR:Ec-00_003270.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 3279961..3280811 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003270.1CDS:Ec-00_003270.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 3280812..3280987 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0032705UTR:Ec-00_003270.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 3286000..3286392 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003270.1 ID=Ec-00_003270.1|Name=Ec-00_003270.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=643bp
MTSDDASEEVVSVEVLSVGMVLLAVLLLLLLLLLAGWGGGGGSPIRKASR
APGSLSSRRTSSTGTTSTITHGCSTAAALEERAEELEAAGDLDGTMEALL
ASHDQGSSRAVTLAHELSQRHPAGLFGANRCPLSVRSPRRKVGAGVEAGT
SADPEASSAAVAGADAAAAAAVSVIAPAPAAAAASLTSEVLADGNNGGAT
GEQENHCVRSPPSGEERSHLPLSGESASSATAAGPGSQAAATTTTGAREP
GKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALPDRGSTPSRDAP
GTAAAFGAGLSPSFSSLTDTGGRSETALDGGDAEATKLVRRNFTVRQLNA
FDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEF
AGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRAR
GYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGE
REVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIY
MGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVL
DYSCLTDREEKNLADWVEKLGEGGKGYPVVGWIDLGSYQGQR*
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spliced messenger RNA

>Ec-00_003270.1 ID=Ec-00_003270.1|Name=Ec-00_003270.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3173bp|location=Sequence derived from alignment at chr_00:3279961..3286392- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGGTGTCTTGCAGTTTGTTGGCTCGGGAACTGCTGTGAGCTGTGAGCATA
CTTGTACCAAGTACCAAGTCACATGACCATCCGAAATCCGAACATCCGTC
CGAACCAACAATGATCCGAACCACAGGAGAACCAAGATAGGAGACGGTTT
GTTTCGTTGTTTCTCTCCCTTTATCTCCCTTCGCCCATCCCCAGCAAGAC
GTTTCCCCAATATTCTCTGTTCTCTCTGTGCTTCCCCGCTTCGGTCATCA
TTCATCAGCACTTATTTGTGTTCTTCCCAGGCGGCCCTGCCCTGGCGGTG
GCACGGGGAACAACTTCTCTCCTTGTACATAAATTCCAAGATAACGCCGG
GGGCGGGGGGTGAGTTGTATTTTGTGTTGGGCCGCACGTCATCATGACGA
GTGATGATGCTTCTGAGGAAGTAGTTTCGGTGGAGGTCTTGTCGGTTGGC
ATGGTGCTTCTGGCCGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGCGGG
ATGGGGGGGTGGTGGTGGCTCGCCTATCAGAAAAGCATCTCGGGCACCGG
GGTCGTTATCGTCACGCCGCACGAGCAGCACAGGCACCACCAGCACCATC
ACCCATGGTTGTTCGACTGCCGCCGCGCTCGAGGAGCGAGCGGAAGAGCT
TGAGGCGGCAGGAGACTTGGACGGAACAATGGAGGCTCTTCTCGCCTCGC
ATGACCAAGGCTCCTCGAGGGCCGTTACGCTGGCGCACGAGCTGTCCCAG
CGACATCCCGCGGGACTGTTCGGAGCGAATAGATGCCCGCTGAGTGTTCG
GTCTCCTCGGCGGAAGGTAGGTGCTGGCGTTGAAGCTGGCACTTCAGCCG
ATCCCGAGGCTTCGTCCGCTGCTGTCGCTGGTGCCGATGCCGCGGCTGCT
GCCGCCGTCTCTGTTATCGCCCCTGCCCCTGCGGCTGCTGCGGCTTCCCT
AACTAGCGAGGTCCTTGCTGATGGCAACAACGGCGGTGCAACAGGCGAGC
AGGAAAATCATTGTGTGCGATCACCACCATCCGGCGAAGAACGATCGCAT
CTTCCTCTTAGCGGTGAAAGCGCCAGCAGTGCGACAGCAGCAGGACCAGG
AAGCCAGGCGGCCGCGACGACAACAACGGGGGCTCGGGAGCCTGGAAAAA
GGATCGACCATGGTGGCGGCGAACCCACCACGACTACTCTGCTGCCTTGG
GAGAGAGGCTGGCAGGGAAGAGAGGGCTTCAAGCCACCGCCGTCGTCGTC
GGCACTCCCCGACAGGGGCTCGACCCCTAGTCGCGATGCCCCCGGAACGG
CGGCGGCGTTCGGAGCTGGCTTGTCGCCGTCGTTTTCGTCGCTTACAGAC
ACGGGCGGCCGGAGCGAAACTGCTTTGGACGGTGGAGACGCGGAGGCGAC
CAAGTTGGTGAGGCGGAACTTCACGGTGCGGCAGCTGAATGCTTTTGACG
GGGGATGCTCGGCTCCGAGGATGAGGGGAGGGGAGGCCAGAGCAGTAAAG
CAACGCCCCATCTACATCGCGCTGAAGGGGGAGGTATACGACGCGTCTGC
GGGGAGACATCTTTACGGCCCGGGAGGAGAATACTCCGAGTTTGCCGGTC
ACGACATATCCAGAAGAGTAGCGCACGGTGCGTCACGTAGTGACAGATCC
AGCAGCACCCTCTTGGACGACCTGTCTCTCGAAGGCTTGGGCCGCTTTGA
GCAGATGACGTTGAGAGGCTGGGAGGACACGTTCAGGGCTCGCGGCTACC
CGAGCTTGGGTAGGGTGGTCGCTCCGCCGCCCCCCCGCTTGTTCTCGCGC
GCCGAGCTGCGGGCTTTCGACGGACGACCAGCTGATGTCGCGGCGTCCGA
ACACGGGGAAACGGAACGGGGAGCGGGGGCGGGGGGGGGAGAACGTGAGG
TGGGAGGGGGAGAACCAGGAGAACAGGCCGCGGTGTTGGCGCGGCAAGAA
GAACAACCTGCCGAGTCGCTGCCGCCAGAGCAGGAGGCGAAGGCGACGGC
GAACGCTGTGTATTTTAGCAACTACGCCGCTCAGCCGATCTATATGGGCG
TGAAGGACAAGGTGTTCGACGTTTCCTTCGGGGGCTCGGAGTTCTACCTG
GAGGGCGGCCCGTACGAGTGCCTCGCGGGGAGAGACGCTTCACGCGTACT
GGCCAAGATGTCGATGGCGAGCGAGGACATCGAGGGTGTCTTGGACTATT
CTTGTCTGACGGACCGGGAGGAAAAGAACCTCGCCGATTGGGTGGAGAAG
CTCGGGGAGGGAGGCAAAGGGTATCCCGTCGTTGGCTGGATAGACCTTGG
TTCGTATCAGGGCCAACGTTGAAGAGTGAACCGTGCGAGAAAGCGCGTTT
TCACGCACCGTTTCCCTTTGTTGGATTGCCTTGTTGCTGTCTCTGCCGCA
TAGAGTGGTGAAAACATTGGACGCTGCCCCCACCCCCTCCGCCGCCGCCG
CTGTTGCACTGCGCGCGTTATTTTTTTTCGTACCAGACGATTTGTTGTGT
TTTCCCCCTTTCACGTTGAGTTGGGGTGTGGTCGTTCGCGTTGTGTATGG
GGGAGCGATACTCTGGTTTGACGCCAAGTGGTGCTCCAGCATTGTATACC
GTGGCACACAGCTCCGGCCGCGAAATCACCGCTACTGCTGTACTGCCGTG
TGGGTCGGTGGGTTTTGTCCCGTTCACTACGTGGTGTCCTGTCGTGCTCG
AAGGAGCAGGGCAGTCTACAGTGCCCACGTAGAAGATGCAAGTGCCCGCT
ACTTTCCTTTGCTGGCCATTTTTTTCGATCCTCACCAAGATGCTGATTTG
GCCGACTTGGCCGACGTTAGGAAAACAATTCAAGGCGCTGCGGTACAGCA
GTGTGTCCTTCTTCGATCTATCTACCGTTGACCTGGTTCCGGGGCTGCCT
ACGTGTAGTTTTCCAGTGCATGTCGGTGATTCCATCGACGCCACTGCAAG
AGTTGTTGTGCCGTCCAAATTGCGGTAGTGTACGAGGGCATCGTGTTTGC
TACAAGTAGGTTTCCGTGCAACGCCTGACGTTGATGTTGTTGCGCACGGC
GGAGGGTTTCTTCTGCGTGGCCCGGTTCTCGGACCGGCGTGCGCACACCA
GCGTTGTCGACTTGTATGTTTGCGGTCACCACAAGAGTTCAACAGTTGCT
GGGTTTTGGTTGGAGGTAGACAC
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protein sequence of Ec-00_003270.1

>Ec-00_003270.1 ID=Ec-00_003270.1|Name=Ec-00_003270.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=643bp
MTSDDASEEVVSVEVLSVGMVLLAVLLLLLLLLLAGWGGGGGSPIRKASR
APGSLSSRRTSSTGTTSTITHGCSTAAALEERAEELEAAGDLDGTMEALL
ASHDQGSSRAVTLAHELSQRHPAGLFGANRCPLSVRSPRRKVGAGVEAGT
SADPEASSAAVAGADAAAAAAVSVIAPAPAAAAASLTSEVLADGNNGGAT
GEQENHCVRSPPSGEERSHLPLSGESASSATAAGPGSQAAATTTTGAREP
GKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALPDRGSTPSRDAP
GTAAAFGAGLSPSFSSLTDTGGRSETALDGGDAEATKLVRRNFTVRQLNA
FDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEF
AGHDISRRVAHGASRSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRAR
GYPSLGRVVAPPPPRLFSRAELRAFDGRPADVAASEHGETERGAGAGGGE
REVGGGEPGEQAAVLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIY
MGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVL
DYSCLTDREEKNLADWVEKLGEGGKGYPVVGWIDLGSYQGQR*
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mRNA from alignment at chr_00:3279961..3286392-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003270.1 ID=Ec-00_003270.1|Name=Ec-00_003270.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6432bp|location=Sequence derived from alignment at chr_00:3279961..3286392- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGGTGTCTTGCAGTTTGTTGGCTCGGGAACTGCTGTGAGCTGTGAGCATA
CTTGTACCAAGTACCAAGTCACATGACCATCCGAAATCCGAACATCCGTC
CGAACCAACAATGATCCGAACCACAGGAGAACCAAGATAGGAGACGGTTT
GTTTCGTTGTTTCTCTCCCTTTATCTCCCTTCGCCCATCCCCAGCAAGAC
GTTTCCCCAATATTCTCTGTTCTCTCTGTGCTTCCCCGCTTCGGTCATCA
TTCATCAGCACTTATTTGTGTTCTTCCCAGGCGGCCCTGCCCTGGCGGTG
GCACGGGGAACAACTTCTCTCCTTGTACATAAATTCCAAGATAACGCCGG
GGGCGGGGGGTGAGTTGTATTTTGTGTTGGGCCGCACGTCATCATGACGA
GTGATGATGCTTCTGAGGAAGTAGTTTCGGTGGAGGTCTTGTCGGTTGGC
ATGGTGCTTCTGGCCGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGCGGG
ATGGGGGGGTGGTGGTGGCTCGCCTATCAGAAAAGCATCTCGGGCACCGG
GGTCGTTATCGTCACGCCGCACGAGCAGCACAGGCACCACCAGCACCATC
ACCCATGGTTGTTCGACTGCCGCCGCGCTCGAGGAGCGAGCGGAAGAGCT
TGAGGCGGCAGGAGACTTGGACGGAACAATGGAGGCTCTTCTCGCCTCGC
ATGACCAAGGCTCCTCGAGGGCCGTTACGCTGGCGCACGAGCTGTCCCAG
CGACATCCCGCGGGACTGTTCGGAGCGAATAGATGCCCGCTGAGTGTTCG
GTCTCCTCGGCGGAAGGTAGGTGCTGGCGTTGAAGCTGGCACTTCAGCCG
ATCCCGAGGCTTCGTCCGCTGCTGTCGCTGGTGCCGATGCCGCGGCTGCT
GCCGCCGTCTCTGTTATCGCCCCTGCCCCTGCGGCTGCTGCGGCTTCCCT
AACTAGCGAGGTCCTTGCTGATGGCAACAACGGCGGTGCAACAGGCGAGC
AGGAAAATCATTGTGTGCGATCACCACCATCCGGCGAAGAACGATCGCAT
CTTCCTCTTAGCGGTGAAAGCGCCAGCAGTGCGACAGCAGCAGGACCAGG
AAGCCAGGCGGCCGCGACGACAACAACGGGGGCTCGGGAGCCTGGAAAAA
GGATCGACCATGGTGGCGGCGAACCCACCACGACTACTCTGCTGCCTTGG
GAGAGAGGCTGGCAGGGAAGAGAGGGCTTCAAGCCACCGCCGTCGTCGTC
GGCACTCCCCGACAGGGGCTCGACCCCTAGTCGCGATGCCCCCGGAACGG
CGGCGGCGTTCGGAGCTGGCTTGTCGCCGTCGTTTTCGTCGCTTACAGAC
ACGGGCGGCCGGAGCGAAACTGCTTTGGACGGTGGAGACGCGGAGGCGAC
CAAGTTGGTGAGGCGGAACTTCACGGTGCGGCAGCTGAATGCTTTTGACG
GGGGATGCTCGGCTCCGAGGATGAGGGGAGGGGAGGCCAGAGCAGTAAAG
CAACGCCCCATCTACATCGCGCTGAAGGGGGAGGTATACGACGCGTCTGC
GGGGAGACATCTTTACGGCCCGGTGAGTGGAGACTGTAAAGAAGCACGAT
GACCACAAGACTGTATTATTCAGCTGTAAAGAAGCACGATGACAACCAGA
CTACTAGTCAGCGCTGACTAGCTTCAGCAGTCTAGTGGTCATCGTGCTTG
TAACAGACAAGCACCTCGTTTTTATGTTCAGCATGTTGGTGTGCGAGAAC
AGGACACGAGAAAAAAAATTCAAGGCACGCAACGCTGGAACTTTTTGAAA
GATGTTAACCCCCTTTGGGTCTAGGGCTGGACTGTCAGATTTTTTTGTTT
GCGCCAAAAAAAAAAAATGAGAGCGAGAGCGAGCGGGAGAGAGAGAAGTG
CAGAGAAAGACACCAGTGTACTTCTGCACACGCAACAGCTATCTCCACCT
GTAGGCCATGAGAGAAGCCGGCGACAGGGTGGTGGCCACAGACAGGGTCG
TAAAAGGGTTGATAGGTGGTCGCGCTGCGGTCAGTAGGGCAGGTTAGCTG
TGTAGACTTCGAAATGATCAATCGTCTAGCTGCCTCAACTAGTCTATTTT
CGGTATATTGTAAATGATCAGTCCAGAGAGGGCAAAATGATCAGTGAAGA
CCCATAGCTGGTATTTGTACTTCTGTACTTCTCTGTTCTCTGTCCCCCCC
CGAAATGTGCCCTGCCAGCTCTCTAGAGCTCCTGTGTTTTTCAAACAACA
AGCACATCCACCAGCACACACCTGTACCTCGTGGTTTCCTAGGTTCGGGC
GAGGGTGGTATGTGTGGCGCTACGAGTGTGGATGTGTTGCTGATATGTTT
TACTCGTCTACAGCAGTAGTAGTAGTGTTGTTGCAGCGTTCGTTGTAGCT
GCTGACACAATGACTGCTGGATCTTGGGAACGATTTTCAAATTGTTGGGA
ACCACGATATCCTTGATATCTGGGCTTCGGCAGGGATTGCAATACCCCTC
CCTTTTGCTGCCCTCTGCTCTTTGCAGCAGTGACTTCCTACGTTCGGGCG
AGTGTATGTGTGGTGCTGCGAAAGAACATATATATATGTATGTATGTATG
TATGTATGCACACACGCGTTCATTGACATGTGCATACGTTGAGAGATTCA
TGATTTGGCATTGATTGGCCCCATTCCCATTCCCGAGACCTTGATATTAC
CCGCTGTCACTGAAGTCTCTTCATTGGTCAGCCGGTTAGCGCGGGTGCTA
ATAATCTAGACACACCTATGGACTTGCCAATACACGGCGCGAAGGGCTGC
AGGGCGGCAACTCCACGACTTGCCACTACACCAGCATTTGCAAATGATCA
ATCAATGATCAGTGAGAACGCCTGAAGACTCAAAAGGGTTAACCTTAAGT
CCTGACCTGTACGTGGTGTACAATGACCGGTGCTTCGAGCATCCGGTACG
AGGTGTACGCAGTGTGCTCGAACCCAGGGCTCCTGGTTGTGCTGGCTCTT
GTGACGATGCATAGCCTGCTACTGCGGTCGCATGCACGCCTCCGGCGATG
GGTGGGCGCAATCTTGGTTGGCTTTCAGGCACGTGATGCCGGTGTGCGCA
CACATCGTTGGCTGATTTTAGAGAGGGCGCGACCGCCAAGACTACTTCTG
TTCGCGGCATGGGGACTATGACGAGGCTCGGACAAAACAGCAGTCCTTGT
ATGTAGGCGCTTCAGTTCCTCAAGCGTGCAGCATGGTGTGCACCCAAGTC
TCCCGTCATAAACAAACATGCTTTTCGAGATCTGTTGGTTTCTCTTGTTC
CTCAGCGAAAATTAACTTCATCTCGCGGAAGAGTGGGCTTCCTTTGACCT
GCTCGTGCTTGATTGCTGTTCCTGCTGCGGGCTTGGACGCTCGCCGCAGA
TTTGCAAAAAGAATCGCCCCAAGTCTTTGGGTTTGGTGTGGCACAAGTGC
TCTCACAGCACAGCACAGCGGTGCTTCGCGCGTAGCACGTTCGACGGTGT
ACCGCAACCACTATTTATTGTTTTTGTTTTTTAGGAGCGTTGCTGCGAGC
AGCAGCTCCTCGTGGTCACTCGTTGTCCAGGGTAGGGGTGCGTTGAAAGA
TATTCATTGACGTTCACGGCCCAACAGCATTTTTCTGGTCTGTTCGTCCG
CACTGATGTGGCGCAAACTTGGGTATTCCTGACATGGGTCGTTTAAGCGT
TGCATGACGCATCCACGGGAACACGGGTTGAATAGCACCTTTAAGAAACG
GTAGGCACCATGTTGGAAAAATTAAAATGAATCCGTCGAACATAGATATG
GTGTTTTCACGTAAAATGGGGGGAAACGGGCGAACCATGCTAACGGGAAA
GCATGAGAAGGGGGCAAGGCCGCATTCAGAACAGACCTGACGCCAGGGGA
AGAAACAGCGACCTGAAATTTTTGGCCAAGGTCGTTTTGTACTCTACCGT
TCTAGGATTCAAAGATGTCTTCCCGAAAAATGGACGAGGTGCCTTGGGAG
TGGTACCCGGCAGGAGGTGCTGTCACGTCCTGTTGGGGTATTGCAAAGGT
TTGGAGCCGTGCGGTGCCGAATGTGACCTTAAATATGTTTCGTTGACCGT
ACCAAATCAGCTCCAGAGAGTCGTTGGTGTTATTTTCGTGTCCCAACGGC
GGTCACGGTTATTGATCTTCGGCGTGTGACTTTTCGCAAGAGGAAGCAAC
AACAGTAGTGACAACTGGCCTACGACGTAAGTAGCTCTAAGGTCCATCTT
TCGTTCATGTCCAAGGTTTGATACCAGGGGGGTCGTGCGTATTGCGGGAA
AGAGTTGTGTTGCCCCTCAACGATCAACGTCCGGCATTTTGGACTCCCCC
ATGGTTTTGTTTTTTCGGCGATGATCTCTAGAATCAAGAAGCAACAACAA
CAGCAATGCTACTCCGAGGGAGGTAGCCCTGCAAATTTGTCTGCTGCCCA
TTTTTGAGGCGTTTGGTGTTCTACATTGTTTGACGATTGGGACAAAAAGG
ATGGCAGTTAACTCTGTTGCCCCCCCGCCCCCGCCCCCGCCCCCCCCCAA
CAGGGAGGAGAATACTCCGAGTTTGCCGGTCACGACATATCCAGAAGAGT
AGCGCACGGTGCGTCACGTAGTGACAGATCCAGCAGCACCCTCTTGGACG
ACCTGTCTCTCGAAGGCTTGGGCCGCTTTGAGCAGATGACGTTGAGAGGC
TGGGAGGACACGTTCAGGGCTCGCGGCTACCCGAGCTTGGGTAGGGTGGT
CGCTCCGCCGCCCCCCCGCTTGTTCTCGCGCGCCGAGCTGCGGGCTTTCG
ACGGACGACCAGCTGATGTCGCGGCGTCCGAACACGGGGAAACGGAACGG
GGAGCGGGGGCGGGGGGGGGAGAACGTGAGGTGGGAGGGGGAGAACCAGG
AGAACAGGCCGCGGTGTTGGCGCGGCAAGAAGAACAACCTGCCGAGTCGC
TGCCGCCAGAGCAGGAGGCGAAGGCGACGGCGAACGCTGTGTATTTTAGC
AACTACGCCGCTCAGCCGATCTATATGGGCGTGAAGGACAAGGTGTTCGA
CGTTTCCTTCGGGGGCTCGGAGTTCTACCTGGAGGGCGGCCCGTACGAGT
GCCTCGCGGGGAGAGACGCTTCACGCGGTAAGGGGCATCATGAGAATGCC
GCGCTTGCTTGTTTTAGCAGGGGCCCGGATCCATCCCTGCTTTTTGTGGT
CTGGTCGGCGGCGCCTGTATGCCACGAACAATTCACGCTACCCAAGTCTA
GATATGCTCCAGTGCTCCTCCTCCCCTCCCCGCCTTCGAGATCTATTGTA
CTTGTATGGTCGAGAGAACCCGGCAATCATTTTCATGAACACACGCCTCC
CGCCCTCTCTCTCTCCCGGCGCTTTTCTACAAATTGTATCCGTTGGTGCC
TCCAGTACTGGCCAAGATGTCGATGGCGAGCGAGGACATCGAGGGTGTCT
TGGACTATTCTTGTCTGACGGACCGGGAGGAAAAGAACCTCGCCGATTGG
GTGGAGAAGCTCGGGGAGGGAGGCAAAGGGTATCCCGTCGTTGGCTGGAT
AGACCTTGGTTCGTATCAGGGCCAACGTTGAAGAGTGAACCGTGCGAGAA
AGCGCGTTTTCACGCACCGTTTCCCTTTGTTGGATTGCCTTGTTGCTGTC
TCTGCCGCATAGAGTGGTGAAAACATTGGACGCTGCCCCCACCCCCTCCG
CCGCCGCCGCTGTTGCACTGCGCGCGTTATTTTTTTTCGTACCAGACGAT
TTGTTGTGTTTTCCCCCTTTCACGTTGAGTTGGGGTGTGGTCGTTCGCGT
TGTGTATGGGGGAGCGATACTCTGGTTTGACGCCAAGTGGTGCTCCAGCA
TTGTATACCGTGGCACACAGCTCCGGCCGCGAAATCACCGCTACTGCTGT
ACTGCCGTGTGGGTCGGTGGGTTTTGTCCCGTTCACTACGTGGTGTCCTG
TCGTGCTCGAAGGAGCAGGGCAGTCTACAGTGCCCACGTAGAAGATGCAA
GTGCCCGCTACTTTCCTTTGCTGGCCATTTTTTTCGATCCTCACCAAGAT
GCTGATTTGGCCGACTTGGCCGACGTTAGGAAAACAATTCAAGGCGCTGC
GGTACAGCAGTGTGTCCTTCTTCGATCTATCTACCGTTGACCTGGTTCCG
GGGCTGCCTACGTGTAGTTTTCCAGTGCATGTCGGTGATTCCATCGACGC
CACTGCAAGAGTTGTTGTGCCGTCCAAATTGCGGTAGTGTACGAGGGCAT
CGTGTTTGCTACAAGTAGGTTTCCGTGCAACGCCTGACGTTGATGTTGTT
GCGCACGGCGGAGGGTTTCTTCTGCGTGGCCCGGTTCTCGGACCGGCGTG
CGCACACCAGCGTTGTCGACTTGTATGTTTGCGGTCACCACAAGAGTTCA
ACAGTTGCTGGGTTTTGGTTGGAGGTAGACAC
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Coding sequence (CDS) from alignment at chr_00:3279961..3286392-

>Ec-00_003270.1 ID=Ec-00_003270.1|Name=Ec-00_003270.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1929bp|location=Sequence derived from alignment at chr_00:3279961..3286392- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGAGTGATGATGCTTCTGAGGAAGTAGTTTCGGTGGAGGTCTTGTC
GGTTGGCATGGTGCTTCTGGCCGTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGGCGGGATGGGGGGGTGGTGGTGGCTCGCCTATCAGAAAAGCATCTCGG
GCACCGGGGTCGTTATCGTCACGCCGCACGAGCAGCACAGGCACCACCAG
CACCATCACCCATGGTTGTTCGACTGCCGCCGCGCTCGAGGAGCGAGCGG
AAGAGCTTGAGGCGGCAGGAGACTTGGACGGAACAATGGAGGCTCTTCTC
GCCTCGCATGACCAAGGCTCCTCGAGGGCCGTTACGCTGGCGCACGAGCT
GTCCCAGCGACATCCCGCGGGACTGTTCGGAGCGAATAGATGCCCGCTGA
GTGTTCGGTCTCCTCGGCGGAAGGTAGGTGCTGGCGTTGAAGCTGGCACT
TCAGCCGATCCCGAGGCTTCGTCCGCTGCTGTCGCTGGTGCCGATGCCGC
GGCTGCTGCCGCCGTCTCTGTTATCGCCCCTGCCCCTGCGGCTGCTGCGG
CTTCCCTAACTAGCGAGGTCCTTGCTGATGGCAACAACGGCGGTGCAACA
GGCGAGCAGGAAAATCATTGTGTGCGATCACCACCATCCGGCGAAGAACG
ATCGCATCTTCCTCTTAGCGGTGAAAGCGCCAGCAGTGCGACAGCAGCAG
GACCAGGAAGCCAGGCGGCCGCGACGACAACAACGGGGGCTCGGGAGCCT
GGAAAAAGGATCGACCATGGTGGCGGCGAACCCACCACGACTACTCTGCT
GCCTTGGGAGAGAGGCTGGCAGGGAAGAGAGGGCTTCAAGCCACCGCCGT
CGTCGTCGGCACTCCCCGACAGGGGCTCGACCCCTAGTCGCGATGCCCCC
GGAACGGCGGCGGCGTTCGGAGCTGGCTTGTCGCCGTCGTTTTCGTCGCT
TACAGACACGGGCGGCCGGAGCGAAACTGCTTTGGACGGTGGAGACGCGG
AGGCGACCAAGTTGGTGAGGCGGAACTTCACGGTGCGGCAGCTGAATGCT
TTTGACGGGGGATGCTCGGCTCCGAGGATGAGGGGAGGGGAGGCCAGAGC
AGTAAAGCAACGCCCCATCTACATCGCGCTGAAGGGGGAGGTATACGACG
CGTCTGCGGGGAGACATCTTTACGGCCCGGGAGGAGAATACTCCGAGTTT
GCCGGTCACGACATATCCAGAAGAGTAGCGCACGGTGCGTCACGTAGTGA
CAGATCCAGCAGCACCCTCTTGGACGACCTGTCTCTCGAAGGCTTGGGCC
GCTTTGAGCAGATGACGTTGAGAGGCTGGGAGGACACGTTCAGGGCTCGC
GGCTACCCGAGCTTGGGTAGGGTGGTCGCTCCGCCGCCCCCCCGCTTGTT
CTCGCGCGCCGAGCTGCGGGCTTTCGACGGACGACCAGCTGATGTCGCGG
CGTCCGAACACGGGGAAACGGAACGGGGAGCGGGGGCGGGGGGGGGAGAA
CGTGAGGTGGGAGGGGGAGAACCAGGAGAACAGGCCGCGGTGTTGGCGCG
GCAAGAAGAACAACCTGCCGAGTCGCTGCCGCCAGAGCAGGAGGCGAAGG
CGACGGCGAACGCTGTGTATTTTAGCAACTACGCCGCTCAGCCGATCTAT
ATGGGCGTGAAGGACAAGGTGTTCGACGTTTCCTTCGGGGGCTCGGAGTT
CTACCTGGAGGGCGGCCCGTACGAGTGCCTCGCGGGGAGAGACGCTTCAC
GCGTACTGGCCAAGATGTCGATGGCGAGCGAGGACATCGAGGGTGTCTTG
GACTATTCTTGTCTGACGGACCGGGAGGAAAAGAACCTCGCCGATTGGGT
GGAGAAGCTCGGGGAGGGAGGCAAAGGGTATCCCGTCGTTGGCTGGATAG
ACCTTGGTTCGTATCAGGGCCAACGTTGA
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Synonyms
The feature 'Ec-00_003270.1' has the following synonyms
Synonym
Esi0217_0002
Esi_0217_0002